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Welcome to Forsyth GCGEMBOSS
  
Important Notice: The service on the old server has been discontinued. Below are upgraded versions of GCG/EMBOSS packages installed on a new computer server. All users need to apply for a new account if you prefer not to use the public one. Please contact George Chen (x8359, tchen@forsyth.org) for setting up a new personal account.
Forsyth GCG/EMBOSS Molecular Biology Software Packages
Click Icons below to start using corresponding software package*
wEMBOSS
Accelrys GCG via W2H web interface EMBOSS via W2H web interface EMBOSS via wEMBOSS web interface
* You may use the forsyth public account as shown below; or contact George Chen x8359 (tchen@forsyth.org)
for a personal account
  1. Accelrys GCG Package

    2. What is Accelrys GCG Package?

    The original name of the Accelrys GCG Pacakge is "GCG Package" or "Wisconsin Package". It is an integrated package featuring a comprehensive collection of DNA-, RNA-, and protein-sequence-analysis tools.

    Launch GCG Wisconsin Package web interface at Forsyth

    Forsyth public login (shared folder, data will be cleaned up regularly):
    username: forsyth
    password: public2008

    !!please remember to click the "EXIT" tab on top of the program web page after you finish using the software!!

    For a personal account (own data folder on the server, please contact George Chen x8359)

    A personal account has a hard drive space limit of 500mb on the server; backup of your data to your own computer is strongly recommended.

    Access GCG Wisconsin Package through the SeqLab graphical interface (X windows) or the UNIX command-line option

    Please contact George Chen x8359 for more information

    GCG WP Training opportunity at Harvard Research Computing Center

  2. EMBOSS

    3. What is EMBOSS?

    EMBOSS (The European Molecular Biology Open Software Suite) is a package of high-quality FREE Open Source software for molecular sequence analysis.

    Launch EMBOSS web interface at Forsyth

    Forsyth public login (shared folder, data will be cleaned up regularly):
    username: forsyth
    password: public2008

    !!please remember to click the "EXIT" tab on top of the program web page after you finish using the software!!

    For a personal account (own data folder on the server, please contact George Chen x8359)

    A personal account has a hard drive space limit of 500mb on the server; backup of your data to your own computer is strongly recommended.

  3. Comparison of GCG and EMBOSS
  4. About the W2H web interface

    5. W2H is a free WWW interface to sequence analysis software tools such as GCG-Wisconsin Package or EMBOSS. It allows users to easily access hundreds of these programs through an user-friendly interface without learning the complicated UNIX commands.

  5. GCG WP Documentation
    • GCG users guide
    • GCG program manual
    • GCG help
    • GCG release notes
    • GCG maintenance note
    • Printed manual, tutorial and users guide are available in George Chen's office (Room 223, ext. 8359), please contact him for a loan. Additional copies may also be purchased at: (608) 231-5200, fax (608) 231-5202, or email doc@gcg.com

      List of printed documentation:

      • SeqLab Tutorial (currently available)
      • SeqLab Guide (currently available)
      • GCG User's Guide (UNIX) (currently available)
      • GCG Program Manual Volume 1 (currently available)
      • GCG Program Manual Volume 2 (currently available)
      • Command-Line Summary (currently available)
      • System Support Manual (currently available)
  6. EMBOSS documentation
  7. Bioinformatics Web Tools Resource

Contact Information:

George Chen
Email: tchen@forsyth.org
Phone extension: 8359 (office Rm 223)
 
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