Welcome to MTD: Microbial Transcriptome Database
 
Streptococcus mutans UA159 Tiling Array-Based Transcriptome Profiles

Single Condition Profiles
No.Culture ConditionsAvailable Data
1.65+100mSingle Probe ProfileCircular MapProbe Intensity Data
2.65-100mSingle Probe ProfileCircular MapProbe Intensity Data
3.UA+100mSingle Probe ProfileCircular MapProbe Intensity Data
4.UA-100mSingle Probe ProfileCircular MapProbe Intensity Data
5.UA+10m Single Probe ProfileCircular MapProbe Intensity Data
6.UA-10m Single Probe ProfileCircular MapProbe Intensity Data

Pairwise Comparison Profiles
No.Culture ConditionsData Type
ProfilesDifferential Expression
All dataUp-regulatedDown-regulated
1.65+100m vs 65-100mProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
2.UA+100m vs 65+100mProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
3.65+100m vs UA-100mProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
4.UA+100m vs UA-100mProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
5.UA-100m vs 65-100mProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
6.UA+10m vs UA-10m ProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
7.UA-10m vs UA-100mProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
8.UA+100m vs UA-10m ProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
9.UA+100m vs UA+10m ProfileCircular MapProbes ORFs antiORFsIGS ORFs antiORFsPathwaysIGS ORFs antiORFsPathwaysIGS
 
Profile Navigation Guide
There are five different ways for nagivation:
1.Panning the profile by left-click the mouse and dragging inside the profile panel.
2.Panning by pressing down LEFT or RIGHT arrow keys.
3.Go to a specific location in the genome by typing in genome coordination (bp), range must be bewteen 1 and 2030921.
4.Go to a locus of the genome by clicking on the green genome bar (position will be reflected in the position field when mouse-over the bar)
5.Go to the left end of a specific gene by gene ID. Currently only NCBI gene ID (e.g., PG0123) can be searched.
 
Legend for Transcriptome Profile Tool Bar

Legend for Single Transcriptome Profile Panel

Legend for Comparative Transcriptome Profile Panel
 
Copyright 2007-2008 The Forsyth Institute
Recommended screen resolution: 1280 x 1024 pix XXXXXX