Overview

PERMANOVA results
method name PERMANOVA
test statistic name pseudo-F
sample size 40
number of groups 14
test statistic 5.59741
p-value 0.001
number of permutations 999

Pairwise permanova results

Download CSV
Sample size Permutations pseudo-F p-value q-value
Group 1 Group 2
Run1 BTO Loading Run1 BTO No_loading 6 999 2.036589 0.200 0.211287
Run1 Commercial Loading 6 999 1.024258 0.394 0.398378
Run1 Commercial No_loading 6 999 1.664434 0.206 0.213023
Run1 HA Loading 6 999 3.530025 0.101 0.133691
Run1 HA No_loading 6 999 3.309877 0.107 0.133691
Run1 plaque_inoculum plaque_inoculum 5 999 7.953248 0.109 0.133691
Run2 BTO Loading 6 999 9.076031 0.110 0.133691
Run2 BTO No_loading 6 999 4.415407 0.082 0.133691
Run2 Commercial Loading 6 999 9.015845 0.090 0.133691
Run2 Commercial No_loading 6 999 3.848891 0.112 0.133691
Run2 HA Loading 6 999 6.836460 0.100 0.133691
Run2 HA No_loading 6 999 6.800289 0.090 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 10.488660 0.096 0.133691
Run1 BTO No_loading Run1 Commercial Loading 6 999 2.668372 0.093 0.133691
Run1 Commercial No_loading 6 999 0.772587 0.662 0.662000
Run1 HA Loading 6 999 3.088342 0.090 0.133691
Run1 HA No_loading 6 999 4.638311 0.101 0.133691
Run1 plaque_inoculum plaque_inoculum 5 999 9.024801 0.100 0.133691
Run2 BTO Loading 6 999 9.266917 0.081 0.133691
Run2 BTO No_loading 6 999 3.426564 0.105 0.133691
Run2 Commercial Loading 6 999 8.966266 0.105 0.133691
Run2 Commercial No_loading 6 999 3.080800 0.104 0.133691
Run2 HA Loading 6 999 5.708155 0.094 0.133691
Run2 HA No_loading 6 999 7.462140 0.111 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 11.424975 0.096 0.133691
Run1 Commercial Loading Run1 Commercial No_loading 6 999 2.089678 0.118 0.133691
Run1 HA Loading 6 999 3.563408 0.109 0.133691
Run1 HA No_loading 6 999 5.357861 0.108 0.133691
Run1 plaque_inoculum plaque_inoculum 5 999 11.831825 0.107 0.133691
Run2 BTO Loading 6 999 11.235377 0.100 0.133691
Run2 BTO No_loading 6 999 4.853899 0.092 0.133691
Run2 Commercial Loading 6 999 10.664677 0.119 0.133691
Run2 Commercial No_loading 6 999 4.419189 0.115 0.133691
Run2 HA Loading 6 999 7.456747 0.107 0.133691
Run2 HA No_loading 6 999 8.497133 0.106 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 15.397762 0.088 0.133691
Run1 Commercial No_loading Run1 HA Loading 6 999 1.792149 0.096 0.133691
Run1 HA No_loading 6 999 2.919829 0.100 0.133691
Run1 plaque_inoculum plaque_inoculum 5 999 4.289767 0.090 0.133691
Run2 BTO Loading 6 999 5.053560 0.101 0.133691
Run2 BTO No_loading 6 999 1.785125 0.186 0.201500
Run2 Commercial Loading 6 999 5.014027 0.097 0.133691
Run2 Commercial No_loading 6 999 2.081580 0.202 0.211287
Run2 HA Loading 6 999 3.143786 0.088 0.133691
Run2 HA No_loading 6 999 4.621430 0.109 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 5.447210 0.083 0.133691
Run1 HA Loading Run1 HA No_loading 6 999 6.270207 0.096 0.133691
Run1 plaque_inoculum plaque_inoculum 5 999 5.821197 0.105 0.133691
Run2 BTO Loading 6 999 6.354684 0.103 0.133691
Run2 BTO No_loading 6 999 2.366988 0.098 0.133691
Run2 Commercial Loading 6 999 5.626845 0.111 0.133691
Run2 Commercial No_loading 6 999 2.841619 0.100 0.133691
Run2 HA Loading 6 999 3.338819 0.086 0.133691
Run2 HA No_loading 6 999 6.925854 0.116 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 7.241842 0.088 0.133691
Run1 HA No_loading Run1 plaque_inoculum plaque_inoculum 5 999 17.014694 0.092 0.133691
Run2 BTO Loading 6 999 13.195047 0.107 0.133691
Run2 BTO No_loading 6 999 7.013607 0.108 0.133691
Run2 Commercial Loading 6 999 13.764762 0.081 0.133691
Run2 Commercial No_loading 6 999 5.064659 0.119 0.133691
Run2 HA Loading 6 999 11.392037 0.089 0.133691
Run2 HA No_loading 6 999 7.786588 0.100 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 19.999051 0.098 0.133691
Run1 plaque_inoculum plaque_inoculum Run2 BTO Loading 5 999 20.417902 0.116 0.133691
Run2 BTO No_loading 5 999 7.034163 0.092 0.133691
Run2 Commercial Loading 5 999 17.716884 0.106 0.133691
Run2 Commercial No_loading 5 999 6.401120 0.110 0.133691
Run2 HA Loading 5 999 11.840540 0.090 0.133691
Run2 HA No_loading 5 999 20.441116 0.075 0.133691
Run2 plaque_inoculum plaque_inoculum 4 999 10.518242 0.358 0.366045
Run2 BTO Loading Run2 BTO No_loading 6 999 5.177530 0.099 0.133691
Run2 Commercial Loading 6 999 2.461637 0.096 0.133691
Run2 Commercial No_loading 6 999 3.582646 0.075 0.133691
Run2 HA Loading 6 999 8.445304 0.087 0.133691
Run2 HA No_loading 6 999 9.566578 0.096 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 19.449201 0.085 0.133691
Run2 BTO No_loading Run2 Commercial Loading 6 999 4.133882 0.095 0.133691
Run2 Commercial No_loading 6 999 1.041996 0.192 0.205553
Run2 HA Loading 6 999 1.880432 0.122 0.135390
Run2 HA No_loading 6 999 5.556697 0.112 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 7.205374 0.107 0.133691
Run2 Commercial Loading Run2 Commercial No_loading 6 999 3.294564 0.101 0.133691
Run2 HA Loading 6 999 5.737397 0.094 0.133691
Run2 HA No_loading 6 999 10.220822 0.118 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 17.531522 0.125 0.137048
Run2 Commercial No_loading Run2 HA Loading 6 999 2.688039 0.111 0.133691
Run2 HA No_loading 6 999 3.256947 0.094 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 6.035741 0.096 0.133691
Run2 HA Loading Run2 HA No_loading 6 999 8.523735 0.099 0.133691
Run2 plaque_inoculum plaque_inoculum 5 999 12.174669 0.099 0.133691
Run2 HA No_loading Run2 plaque_inoculum plaque_inoculum 5 999 19.791476 0.096 0.133691