GroupKO3Hlig...1 GroupKO3Hlig...2 GroupKO3Hlig...3 GroupKO3Hlig...4 GroupKO3Hlig...5 GroupKO3Hlig...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Bifidobacterium pseudolongum (SP10) -0.233432414262202 0.842792846146043 -0.276974840649931 0.781799424916622 1 FALSE Terrisporobacter petrolearius (SP109) 0.624966951095734 1.26285454078784 0.494884352006087 0.620681756955471 1 FALSE Erysipelatoclostridium [Clostridium] innocuum (SP117) 0.317384578230521 0.560674263236806 0.56607659570147 0.571341712549586 1 FALSE Ruthenibacterium lactatiformans (SP124) 0.552382086643249 1.01788945777378 0.542673944036475 0.587354317246675 1 FALSE Staphylococcus ureilyticus (SP126) -0.0694387430129669 1.08181205456831 -0.0641874369209873 0.948820980651236 1 FALSE Turicimonas muris (SP13) -0.280599325560411 0.327953063608312 -0.855608185125973 0 0 TRUE Ileibacterium valens (SP14) 0.821537115871344 0.325604668384444 2.52311221441503 0.0116321275700213 0.767720419621407 FALSE Desulfovibrio fairfieldensis (SP145) 0.626727162846495 0.605478372712625 1.03509421821076 0.300624912462697 1 FALSE Lachnospiraceae_[G-3] bacterium_MOT-168 (SP147) 2.6684634953409 0.797114590941087 3.34765355654883 0.000814988232175531 0.0594941409488138 FALSE Streptococcus danieliae (SP15) 1.46466842924985 0.800086598182169 1.83063737422628 0.0671546862302858 1 FALSE Adlercreutzia mucosicola (SP161) 1.75731138356432 0.818315393435208 2.14747443059491 0.0317555306824349 1 FALSE Bacteroides acidifaciens (SP2) 2.19070701135354 0.730575626055037 2.9986040229441 0.00271219552255216 0.187141491056099 FALSE Enterococcus faecalis (SP20) 0.472342395812617 0.935778575925916 0.504758719599081 0.61372831290715 1 FALSE Rothia nasimurium (SP201) -0.2369933402358 0.526934546419026 -0.449758593066963 0.652884517445805 1 FALSE Peptococcaceae_[G-1] bacterium_MOT-146 (SP202) 0.0224666412761823 0.26327210450889 0.0853362011827716 0.931994112105678 1 FALSE Erysipelatoclostridium ramosum (SP21) 0.631477566754518 1.30364478002833 0.484393890443682 0.628106353519782 1 FALSE Marinobacter persicus (SP215) -2.16161170150686 0.9429210682754 -2.2924630430206 0 0 TRUE Carnobacteriaceae_[G-1] bacterium_MOT-198 (SP23) 0.689174295097792 0.443617744509986 1.55353184949589 0.120296126404466 1 FALSE Erysipelatoclostridium [Clostridium] cocleatum (SP24) 2.09793880713624 0.775316064588661 2.70591427542429 0.00681166271873886 0.456381402155503 FALSE Akkermansia muciniphila (SP25) 1.56097817399006 0.565440922626222 2.76063884223309 0.00576884313473137 0.392281333161733 FALSE Lactobacillus johnsonii (SP26) 0.280331900828145 0.370991090593784 0.755629738653465 0.449871220637582 1 FALSE Adlercreutzia caecimuris (SP282) -0.282301520822087 0.753306157567894 -0.374750050807388 0.707846365125663 1 FALSE Schlegelella aquatica (SP296) -0.353108832021264 0.714446986254665 -0.494240774773732 0.621136146386882 1 FALSE Alistipes sp._MOT-127 (SP3) 0.796206136997401 0.85696698741905 0.929097793364662 0.352838407948137 1 FALSE Mediterraneibacter [Ruminococcus] gnavus (SP309) -0.95432093319957 0.729738566719011 -1.30775729380771 0 0 TRUE Gemella sp._MOT-043 (SP33) -2.04724406811345 0.634651889708549 -3.22577479293979 0.00125632169537244 0.0904551620668158 FALSE Robinsoniella peoriensis (SP34) 1.43295040704413 0.986416217394262 1.45268334175349 0.146311694227594 1 FALSE Helicobacter typhlonius (SP35) -0.0179323378189501 0.469378302798416 -0.0382044455656305 0.969524676436497 1 FALSE Corynebacterium mastitidis (SP39) -0.0988293581963415 0.67013525709689 -0.147476732718829 0.882755743511781 1 FALSE Triticum aestivum (SP44) -0.432507521936679 0.379791286305932 -1.13880317303616 0.254785258073055 1 FALSE Blautia wexlerae (SP441) -1.13595984381526 0.839647961204154 -1.35290013946579 0 0 TRUE Parabacteroides goldsteinii (SP45) 1.0326431716528 0.566610298176458 1.82249276967995 0 0 TRUE Faecalibaculum rodentium (SP53) 1.7370721322031 0.763776326311679 2.27432046839096 0.0229467253773725 1 FALSE Ralstonia pickettii (SP56) -0.590049196932361 1.37791039758976 -0.428220294994852 0.668490741827092 1 FALSE Rodentibacter pneumotropicus (SP6) 0.0361532939675902 0.75135457837199 0.0481174867476365 0.961622609937964 1 FALSE Muribaculum intestinale (SP7) 1.25146633311854 0.756267784204478 1.65479260026257 0.0979665755189242 1 FALSE Cutibacterium acnes (SP72) -0.128550957840331 0.262720166143231 -0.489307538616 0.624623984742982 1 FALSE Erysipelotrichaceae_[G-1] bacterium_MOT-189 (SP8) 1.22479844117416 0.214159197445262 5.71910268522185 1.070880667558e-08 8.03160500668501e-07 TRUE Alistipes timonensis (SP81) 2.38539041821374 0.579168927471241 4.11864363758049 3.81108984896512e-05 0.00282020648823419 TRUE Phocaeicola sartorii (SP9) 2.33928139618342 0.739094218031172 3.16506520970342 0.00155048197927558 0.110084220528566 FALSE Anaerostipes caccae (SP94) -0.110384805541893 0.810395163708176 -0.136211086251796 0.891654411290715 1 FALSE Parabacteroides distasonis_nov_96.753% (SPN1513) 0.915486254440949 0.68499735381494 1.33648144674188 0.181391960747394 1 FALSE Muribaculaceae_[G-1] bacterium_MOT-129_nov_86.853% (SPN164) 0.660338074597307 0.412818980771843 1.59958263876986 0 0 TRUE Faecalicatena orotica_nov_95.711% (SPN2010) 1.700911157537 0.809091710012343 2.10224766424939 0.0355315864759869 1 FALSE Parabacteroides merdae_nov_95.032% (SPN2281) 0.857894371542414 0.466226618694167 1.84008020379714 0 0 TRUE Muribaculaceae_[G-2] bacterium_MOT-104_nov_93.521% (SPN2453) 0.494601425312951 0.734660068865261 0.673238476234187 0.500795586573595 1 FALSE Actinidia eriantha_nov_97.065% (SPN3078) -0.557964695385789 0.819258423711708 -0.68106067540678 0.495833098552976 1 FALSE Neglectibacter timonensis_nov_97.511% (SPN3651) 0.311490498575277 0.552210527403446 0.564079247166727 0.572700200899206 1 FALSE Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.672% (SPN43) 0.0873080328559859 0.665560240301632 0.131179760402181 0.895633106449979 1 FALSE Parasutterella excrementihominis_nov_94.004% (SPN450) 0.44227353267788 0.735439200172254 0.601373346123366 0.547591347343813 1 FALSE Neglectibacter timonensis_nov_96.825% (SPN4831) 0.615925086312379 0.792966362800627 0.776735452102952 0.437314866023333 1 FALSE Alistipes putredinis_nov_96.529% (SPN5147) -0.450763366778677 0.432793965328246 -1.04151952866719 0 0 TRUE Desulfovibrio fairfieldensis_nov_94.433% (SPN5234) 0.13182408698244 0.409250529535693 0.322110974742043 0.747368624378447 1 FALSE Actinidia eriantha_nov_97.291% (SPN5391) -2.10628514705219 0.972215547454375 -2.16647959659484 0.0302745573416632 1 FALSE Alistipes putredinis_nov_96.104% (SPN5458) 1.30562982343184 0.547731450366907 2.38370431816037 0 0 TRUE Mailhella massiliensis_nov_92.111% (SPN5518) 1.26778693658332 0.782458859638607 1.62026018488546 0 0 TRUE Ihubacter massiliensis_nov_96.840% (SPN5537) 0.175771156405245 0.510768808001827 0.344130560933972 0.730748100622551 1 FALSE Parasutterella excrementihominis_nov_93.576% (SPN56) 0.378814789710007 0.596872369669415 0.634666318897988 0.525646064902197 1 FALSE Parabacteroides distasonis_nov_96.963% (SPN6) 1.00236570935592 0.647849240002427 1.54722063014563 0 0 TRUE Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.087% (SPN990) 1.80421019362327 0.885906533278117 2.03656946398979 0.0416932054363443 1 FALSE Clostridium subterminale_sulfidigenes_thiosulfatireducens (SPP116) 0.527841957691356 1.21401039631725 0.434791958365914 0.663713442505007 1 FALSE Lactobacillus_Limosilactobacillus reuteri_reuteri_clade_938 (SPP131) 0.159447180192314 0.800386570543608 0.19921271303193 0.842096355169853 1 FALSE Streptococcus acidominimus_sp._MOT-012 (SPP26) 1.34453862402162 0.222382685801008 6.04605803360399 1.48432649084784e-09 1.12808813304436e-07 TRUE Paracoccus carotinifaciens_hibiscisoli_marcusii_nototheniae (SPP4) -2.13946476363789 1.41773450625111 -1.50907292882024 0.131280146749585 1 FALSE Escherichia_Shigella coli_fergusonii_flexneri_sonnei (SPP43) 2.08145849389676 0.83457728777083 2.49402724516548 0.0126302849382706 0.820968520987592 FALSE Delftia lacustris_tsuruhatensis (SPP58) -1.79127700486954 0.995885041794253 -1.79867849168842 0.0720695531218571 1 FALSE Ligilactobacillus animalis_apodemi_murinus (SPP70) 1.13779482352352 0.364748174877939 3.1193982640332 0.00181220830373727 0.126854581261609 FALSE Staphylococcus saprophyticus_xylosus (SPP89) -1.2633149167372 1.04002489859203 -1.214696800478 0.22448175329674 1 FALSE Pasteurella_Rodentibacter caecimuris_heylii (SPP99) 0.50441223932135 0.377520366474152 1.33611927756985 0.181510289968785 1 FALSE Olsenella multispecies_sppn107_2_nov_95.982% (SPPN107) 1.80692270884649 0.799799302381394 2.25922016119094 0 0 TRUE Olsenella multispecies_sppn21_2_nov_95.991% (SPPN21) -0.272629654019118 0.899608163359134 -0.303053779548998 0.761848877289654 1 FALSE Rhodoligotrophos multispecies_sppn51_2_nov_79.912% (SPPN51) -0.30826720331686 1.04228064105412 -0.295762188392073 0.767411701040019 1 FALSE Rhodoligotrophos multispecies_sppn60_2_nov_79.736% (SPPN60) -0.443962904390855 0.884071346775797 -0.502179949627351 0.615540945546071 1 FALSE Bacteroidetes_[G-3] multispecies_sppn670_2_nov_87.768% (SPPN670) 1.05227485158845 0.551677838429669 1.90740823409494 0 0 TRUE Rhodoligotrophos multispecies_sppn678_2_nov_79.295% (SPPN678) -0.266691733324449 0.88784869813859 -0.300379708708904 0.763887539574827 1 FALSE Bacteroides multispecies_sppn9_2_nov_96.095% (SPPN9) 1.92307754881739 0.954321671051655 2.01512509581614 0.0438915433381474 1 FALSE