taxon lfc: UR vs. Day 0 se: UR vs. Day 0 W: UR vs. Day 0 p: UR vs. Day 0 q: UR vs. Day 0 diff: UR vs. Day 0 Ruminococcaceae_[G-2] bacterium_HMT_085 (SP1) 5.59278065322999 1.19914620598917 4.66396893497781 3.10168224529579e-06 0.000676166729474482 TRUE Leptotrichia sp._HMT_498 (SP10) -1.2210923338878 0.718467970965474 -1.69957796761197 0.0892103375120254 1 FALSE Campylobacter concisus (SP100) -0.235893925311561 0.983565837659155 -0.239835419531222 0.810457847372136 1 FALSE Phocaeicola abscessus (SP101) 6.33937830678944 1.16321286454735 5.44988668884464 5.04019220216141e-08 1.2146863207209e-05 TRUE Peptostreptococcus stomatis (SP102) 7.48685557526246 1.32674203445635 5.64303789344421 1.67075555706555e-08 4.09335111481061e-06 TRUE Prevotella oralis (SP103) 6.18619045909295 1.24700290692609 4.96084686309363 7.01865092361489e-07 0.000160727106150781 TRUE Prevotella sp._HMT_301 (SP104) 0.637729369613732 0.818445553968995 0.77919583840502 0.43586436120537 1 FALSE Capnocytophaga sp._HMT_864 (SP105) -0.0777357726501989 0.99354314350031 -0.0782409633227715 0.937636377851169 1 FALSE Prevotella veroralis (SP106) 0.0486576694899187 0.695661939103677 0.0699444180496802 0.944237899185456 1 FALSE Lachnospiraceae_[G-7] bacterium_HMT_163 (SP107) 5.28471908389982 1.08897860177535 4.85291361582697 1.21660693569825e-06 0.000272519953596408 TRUE Propionibacterium acidifaciens (SP108) -0.319970209959692 0.684303311274365 -0.467585359719826 0.640081136491476 1 FALSE Neisseria flavescens (SP109) 2.84699152708769 0.891784778634911 3.19246481359066 0.00141064130229618 0.265200564831682 FALSE Fretibacterium fastidiosum (SP110) -0.113999099781561 0.986527384987783 -0.115555940480023 0.908004483299277 1 FALSE Lautropia mirabilis (SP112) 1.77086020201816 0.762178824050156 2.32341826634327 0.020156693768116 1 FALSE Capnocytophaga endodontalis (SP113) 3.37931455148766 0.690106935251201 4.89679842191062 9.74106713873099e-07 0.000221122224049193 TRUE Prevotella melaninogenica (SP114) -2.229387438057 0.823147530854731 -2.70836922239453 0.00676147539641278 1 FALSE Prevotella denticola (SP116) -0.248356031721243 0.972156461450995 -0.255469198189105 0.79836073076897 1 FALSE Dialister invisus (SP117) 0.510233903790443 1.22529395421712 0.416417547833613 0.677104490048283 1 FALSE Prevotella oulorum (SP118) -0.722674365841607 0.88177431509772 -0.819568401424257 0.412462193280406 1 FALSE Bergeyella sp._HMT_907 (SP119) 6.2050620890859 1.17225036193242 5.2932908281274 1.20134636710995e-07 2.84719089005058e-05 TRUE Fusobacterium nucleatum (SP12) 3.03383192724516 0.717180307561101 4.23022201705768 2.33460781273726e-05 0.00487933032862087 TRUE Tannerella sp._HMT_808 (SP121) -0.784750700431604 0.698702014454091 -1.12315505637227 0.261371646663997 1 FALSE Fretibacterium sp._HMT_359 (SP122) -0.763343618615476 0.685281627966023 -1.11391227703149 0.265316821983762 1 FALSE Prevotella sp._HMT_315 (SP124) 0.850269852646158 0.962930269621849 0.883002517908245 0.377234911094319 1 FALSE Capnocytophaga haemolytica (SP125) -0.523747764224457 0.68399221576139 -0.765721819862298 0.443841841059877 1 FALSE Schaalia sp._HMT_180 (SP126) 2.47923187958886 1.43703813608929 1.72523735962621 0.0844847054711561 1 FALSE Peptococcus sp._HMT_167 (SP128) -0.572794655705742 0.785687217494539 -0.729036495632848 0.465979338368 1 FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP129) 4.82352371921748 0.983230632490544 4.90579072684034 9.30516977255983e-07 0.000212157870814364 TRUE Streptococcus cristatus (SP13) 5.18688868939411 0.714108606300559 7.26344514494063 3.77353509560337e-13 9.9621326523929e-11 TRUE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP130) 4.66208094658356 1.43106444006271 3.25777149935978 0.00112290784993849 0.214475399338252 FALSE Tannerella sp._HMT_916 (SP132) 1.64227084007354 1.1269254114171 1.45730216342215 0.145032989917258 1 FALSE Lachnospiraceae_[G-8] bacterium_HMT_500 (SP133) 7.08108940938451 0.988831249881139 7.16106960640219 8.00499874880055e-13 2.10531467093454e-10 TRUE Enterobacter cloacae (SP134) 11.1850071280079 0.841744848937049 13.2878830706624 2.72169822856649e-40 7.5935380577005e-38 TRUE Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091 (SP135) 6.60067964304096 1.00398817652604 6.57445953784075 4.88302059250375e-11 1.25493629227346e-08 TRUE Porphyromonas gingivalis (SP136) 4.91788436102654 1.13721938530097 4.32448164759783 1.52890930759266e-05 0.00325657682517236 TRUE Centipeda periodontii (SP137) 3.26278050320047 1.42185829667245 2.29472972857864 0.0217486179891713 1 FALSE Leptotrichia sp._HMT_212 (SP138) -1.80105754004692 0.680427405176387 -2.64695032320168 0.00812212834453632 1 FALSE Streptococcus salivarius (SP139) 5.46057792049764 0.816454199603402 6.68816196076908 2.25990952462651e-11 5.87576476402892e-09 TRUE Streptococcus oralis (SP14) 5.61373769747112 0.721272828424335 7.78309881676074 7.07693125067745e-15 1.88954064393088e-12 TRUE Streptococcus chosunense (SP140) 4.87593955357771 0.73893969335417 6.59856223373929 4.15164202839131e-11 1.07112364332496e-08 TRUE Porphyromonas catoniae (SP141) 2.1126881727033 0.712720379196011 2.96425952501391 0.00303412281255452 0.558278597510032 FALSE Leptotrichia sp._HMT_225 (SP142) -0.0841705830809262 0.937955455027312 -0.0897383587139278 0.928495133051532 1 FALSE Capnocytophaga sp._HMT_902 (SP143) 1.50141322090978 1.28405922799273 1.16927100259761 0.242294462262438 1 FALSE Selenomonas flueggei (SP144) 2.65175232299728 1.23240723893705 2.15168512421626 0.0314221625503281 1 FALSE Kingella oralis (SP145) -0.873696094914471 0.715550749639814 -1.22101206008695 0.222081453587432 1 FALSE Treponema maltophilum (SP146) 4.4781305187317 0.699202249763861 6.40462830353319 1.50736149053686e-10 3.84377180086898e-08 TRUE Capnocytophaga sp._HMT_338 (SP149) 0.289931403204832 1.18659560236664 0.244338848573659 0.806968398255108 1 FALSE Solobacterium moorei (SP15) 6.93859086127099 0.738375454076502 9.39710390285008 5.60855361698456e-21 1.53674369105377e-18 TRUE Neisseria oralis (SP151) 3.96793367414421 1.12182915191878 3.53702136136991 0.000404666934929161 0.080124053115974 FALSE Treponema sp._HMT_231 (SP152) -1.04776156937808 0.697117789234523 -1.50299072202501 0.132841436530499 1 FALSE Capnocytophaga sputigena (SP153) 1.92507680015516 1.20200323863765 1.60155708260573 0.109253587661956 1 FALSE Treponema vincentii (SP154) 7.30587485089263 0.694247740877674 10.5234405828335 6.7367686936718e-26 1.85261139075975e-23 TRUE Dialister micraerophilus (SP155) 5.26181413495004 1.22281658890348 4.30302809325508 1.68479477568498e-05 0.00357176492445216 TRUE Neisseria sp._HMT_020 (SP156) 6.44969294284927 0.748677329388408 8.61478328470024 7.00740152950467e-18 1.89199841296626e-15 TRUE Mycoplasma salivarium (SP157) 1.37079408985552 0.953409185934567 1.43778150040773 0.150496059941469 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP158) -1.65670688372467 0.687497825336551 -2.40976308967038 0.0159628823201737 1 FALSE Prevotella salivae (SP159) -0.771192442706241 0.749994733944782 -1.02826381013366 0.303825749653993 1 FALSE Anaeroglobus geminatus (SP16) -0.639550898946198 0.679630800204729 -0.941026949857985 0.346691048621625 1 FALSE Aggregatibacter sp._HMT_512 (SP160) 9.76591774754815 0.765612036307693 12.7557003866424 2.89758709894277e-37 8.05529213506091e-35 TRUE Cardiobacterium valvarum (SP162) 0.519871587514912 0.971751366500194 0.534984158949272 0.592660811289251 1 FALSE Selenomonas sp._HMT_481 (SP163) 3.85604873123689 1.3873311532314 2.77947245850806 0.00544472704017814 0.980050867232064 FALSE Mycoplasma faucium (SP164) 1.09664827155582 1.25124433711619 0.876446141673118 0.380787543464206 1 FALSE Prevotella marshii (SP166) 6.07080912230619 1.18652874215076 5.1164450608267 3.11347916650271e-07 7.25440645795131e-05 TRUE Prevotella sp._HMT_314 (SP167) -1.06305109289243 0.694657228651783 -1.53032466811818 0.125936385222128 1 FALSE Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP169) 2.77462877843243 1.20547790085912 2.30168365297696 0.0213530187333589 1 FALSE Streptococcus sanguinis (SP17) -0.88292479436153 1.16242519881589 -0.759554073037065 0.447521180567477 1 FALSE Peptidiphaga sp._HMT_183 (SP170) -3.81922272979765 0.699765981583424 -5.45785709839101 4.81915256525175e-08 1.16623492079092e-05 TRUE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP171) -1.65488299545348 0.69555752893346 -2.37921800370849 0.0173494119844646 1 FALSE Rothia dentocariosa (SP173) -2.32196815340206 0.696489709848116 -3.33381544704861 0.000856634753022608 0.166187142086386 FALSE Streptococcus mutans (SP174) -1.34849227017474 0.72784501969317 -1.85271896308806 0.0639226505581786 1 FALSE Cardiobacterium hominis (SP175) -1.73869370834802 0.705195909212911 -2.46554707086805 0.0136804199056683 1 FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP176) -0.80273622676259 0.701341229063787 -1.14457298886329 0.252386086758436 1 FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP178) -0.73167029987518 0.683494027352691 -1.07048528676847 0.284400928205732 1 FALSE Prevotella loescheii (SP179) -0.518948554574894 1.3843071765381 -0.374879624530077 0.707749993138305 1 FALSE Prevotella buccae (SP18) 6.80854810338599 1.2598892760457 5.40408449602441 6.51402341077738e-08 1.56336561858657e-05 TRUE Alloprevotella sp._HMT_473 (SP180) -1.0185056763841 0.689915711280633 -1.47627552138729 0.13986994272145 1 FALSE Bacteroidetes_[G-7] bacterium_HMT_911 (SP181) 5.86920328011727 1.2177763505657 4.8196068821593 1.43841375430983e-06 0.000319327853456783 TRUE Leptotrichia sp._HMT_417 (SP182) -1.74555341564349 0.713867221947978 -2.44520740268796 0.014476886348721 1 FALSE Capnocytophaga sp._HMT_332 (SP183) -1.20505541596529 0.681042777788682 -1.76942690718791 0.0768226586102169 1 FALSE Capnocytophaga granulosa (SP184) 0.0344315159396726 1.22719543287798 0.028057076336183 0.977616628705184 1 FALSE Actinomyces sp._HMT_171 (SP185) 0.459020981599742 0.750805037553991 0.611371739186997 0.540953507606615 1 FALSE Anaerolineae_[G-1] bacterium_HMT_439 (SP186) 4.90737374015874 0.731413250826465 6.70944057222592 1.95371964267738e-11 5.09920826738797e-09 TRUE Lancefieldella rimae (SP187) -0.906412158364925 0.714906387531441 -1.26787531091273 0.204842482163488 1 FALSE Streptococcus anginosus (SP188) 6.20916292508613 0.763270221802037 8.13494716252215 4.12118052624447e-16 1.10447638103352e-13 TRUE Oribacterium sp._HMT_078 (SP19) 0.207740305040247 0.955101845487093 0.217505919417737 0.827814094391209 1 FALSE Actinomyces sp._HMT_169 (SP190) -0.626665482466535 0.859980480592837 -0.728697332798223 0.466186824703807 1 FALSE Stomatobaculum longum (SP192) -1.16056819578072 0.776551820640527 -1.4945148088423 0.135041114230316 1 FALSE Shuttleworthia satelles (SP194) 3.76240467634042 1.15939255199115 3.24515167005242 0.00117388082320428 0.223037356408813 FALSE Parvimonas sp._HMT_110 (SP195) -0.170465428427246 1.22668042033638 -0.138964823764368 0.889477945859554 1 FALSE Campylobacter rectus (SP196) 4.84012831923942 1.13310891753233 4.27154728406884 1.9412135516849e-05 0.00409596059405513 TRUE Campylobacter gracilis (SP197) -1.39325191709195 0.684541563998199 -2.03530653267333 0.0418200392695058 1 FALSE Saccharibacteria_(TM7)_[G-4] bacterium_HMT_355 (SP198) 7.66436620609829 1.21767333222667 6.2942712164707 3.08847417881769e-10 7.81383967240876e-08 TRUE Mogibacterium timidum (SP199) -0.467064833531488 0.683172145320792 -0.683670780096241 0.494183078676982 1 FALSE Prevotella oris (SP2) -1.4637401568248 1.14249890802897 -1.28117422829754 0.200132476140361 1 FALSE Arachnia propionica (SP20) -2.35710346453709 0.697571330236782 -3.37901424896146 0.000727462376106622 0.142582625716898 FALSE Gemella haemolysans (SP200) -0.830373297066467 0.690686911761376 -1.20224269915419 0.229269510355858 1 FALSE Porphyromonas sp._HMT_275 (SP201) 1.90871539121774 1.16598625736264 1.636996473299 0.101631206461295 1 FALSE Megasphaera micronuciformis (SP205) -1.25301109240425 0.702956838252107 -1.78248652580127 0.0746699265829363 1 FALSE Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 (SP206) 6.27226299103893 1.21509573719198 5.16194963002156 2.4439105790694e-07 5.71875075502239e-05 TRUE Olsenella sp._HMT_807 (SP207) -0.95531093566424 0.683659333924959 -1.39734936430942 0.162308538039376 1 FALSE Filifactor alocis (SP208) 5.30361899929563 1.2053955778431 4.39989916736361 1.08301189616616e-05 0.00232847557675725 TRUE Haemophilus parainfluenzae (SP21) 2.30249803976435 0.768236637993 2.99712084258253 0.0027254265382924 0.506929336122386 FALSE Pseudoleptotrichia goodfellowii (SP210) -0.23718043993068 0.795211515266828 -0.29826082165208 0.765504103954723 1 FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP211) 7.55333360613494 0.704990608717221 10.7140910995662 8.74116018544918e-27 2.41256021118397e-24 TRUE Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP212) 7.34174693864406 1.32564328570178 5.53825227180736 3.05504990802884e-08 7.45432177559038e-06 TRUE Desulfobulbus sp._HMT_041 (SP214) -0.245415788424857 0.856182560634626 -0.286639555287074 0.774388323978487 1 FALSE Kingella denitrificans (SP215) -0.386335240833609 0.696737309465048 -0.55449196646328 0.579242202107155 1 FALSE Peptoanaerobacter [Eubacterium] yurii (SP217) 1.74623597372485 1.35402571604651 1.28966234025711 0.197167920614263 1 FALSE Streptococcus sp._HMT_056 (SP219) 0.737672606110099 0.996759607053916 0.740070726070461 0.459257080388906 1 FALSE Selenomonas infelix (SP22) 4.14750279109688 1.23672765960523 3.35361044032991 0.000797645749435742 0.15554092113997 FALSE Klebsiella michiganensis (SP223) 12.8556895278589 0.846501969165687 15.1868394831136 4.32264625156204e-52 1.21898624294049e-49 TRUE Haemophilus parahaemolyticus (SP224) -0.502874944914703 0.703401948320251 -0.71491832815588 0.474659511036907 1 FALSE Fusobacterium periodonticum (SP226) 0.36053208972272 1.34665014843169 0.26772513272478 0.788910902676278 1 FALSE Selenomonas dianae (SP228) 1.63775863393923 1.1828921069474 1.38453762969615 0.166193894185437 1 FALSE Treponema sp._HMT_237 (SP229) -0.98379824334623 0.734258031226756 -1.33985356850991 0.180292955957573 1 FALSE Aggregatibacter aphrophilus (SP23) 1.28881150781674 0.802032952304574 1.60693086750793 0.108069534235959 1 FALSE Abiotrophia defectiva (SP230) 0.290415038786759 1.219292197321 0.238183299642902 0.811738929389905 1 FALSE Prevotella sp._HMT_292 (SP231) 3.00880370134538 0.910394340337966 3.30494552528569 0.000949948615820234 0.183340082853305 FALSE Bergeyella sp._HMT_322 (SP232) -0.962348967887206 0.735070165746698 -1.30919334334517 0.190468866514767 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP234) -0.0606663198976327 0.723502831980469 -0.0838508395766312 0.933175026173875 1 FALSE Corynebacterium durum (SP235) -1.41534894222534 0.706016569538771 -2.00469649480035 0.0449955034851288 1 FALSE Gracilibacteria_(GN02)_[G-2] bacterium_HMT_873 (SP236) 6.95263817053167 1.47611657461956 4.71008746197675 2.47610510920841e-06 0.00054474312402585 TRUE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP237) -1.11370295429325 0.903968017907961 -1.23201588134796 0.217943151700552 1 FALSE Rothia aeria (SP238) -1.14334744536941 0.698810876340102 -1.63613287096716 0.101811781990616 1 FALSE Capnocytophaga leadbetteri (SP24) -2.24271862885644 0.702599071366226 -3.19203187174074 0.00141275742902232 0.265200564831682 FALSE Schaalia meyeri (SP240) -0.439668316996923 0.686061188059603 -0.640858752322724 0.521614456897729 1 FALSE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_103 (SP241) 6.08677715400083 1.25293530724636 4.85801391244856 1.18569080146976e-06 0.000266780430330697 TRUE Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP242) -0.518148685786547 0.709511081813877 -0.730289771460498 0.465213079134829 1 FALSE Selenomonas sp._HMT_919 (SP243) -0.0209121776085531 0.707226449995965 -0.0295692809688783 0.976410564831441 1 FALSE Streptococcus sp._HMT_064 (SP244) 4.42885370749033 0.724772468889866 6.1106814863898 9.92065881355047e-10 2.49008536220117e-07 TRUE Oribacterium sinus (SP246) 0.250368542882753 0.984144279992902 0.254402274110214 0.79918479426332 1 FALSE Aggregatibacter sp._HMT_898 (SP247) 3.2064011565283 1.55788078166657 2.05818134112817 0.0395727290535893 1 FALSE Lachnoanaerobaculum saburreum (SP248) -0.971483107805075 0.710882040827534 -1.36658833957062 0.171754374144346 1 FALSE Fusobacterium sp._HMT_370 (SP25) 7.27756002573525 0.861675152417061 8.44582787993964 3.01898228572426e-17 8.12106234859826e-15 TRUE Mogibacterium neglectum (SP250) 1.21958572429237 1.34180203853409 0.908916285165851 0.363394316863503 1 FALSE Peptidiphaga gingivicola (SP251) -1.80332161804297 0.721381351874371 -2.49981734814379 0.0124257352669167 1 FALSE Streptococcus infantis_clade_431 (SP254) 0.883774214950001 1.10710668341188 0.798273760055705 0.424711641849864 1 FALSE Schaalia odontolytica (SP255) 2.01910045463108 1.19595458223081 1.68827519425099 0.0913584146618329 1 FALSE Porphyromonas sp._HMT_284 (SP256) 1.8107108919905 0.941765894933254 1.92267622105686 0.0545207249725362 1 FALSE Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081 (SP257) 5.54467288607408 1.20861060166807 4.58764210608578 4.4828027816879e-06 0.000968285400844587 TRUE Leptotrichia sp._HMT_909 (SP258) 0.52484127799156 1.11926720864535 0.468915084742609 0.639130333478298 1 FALSE Actinomyces sp._HMT_448 (SP259) -0.190787982926759 0.786602081195559 -0.242547010092803 0.808356335250415 1 FALSE Leptotrichia hofstadii (SP26) -1.91858700334862 0.68754201530137 -2.79050146849228 0.00526264614866307 0.952538952908016 FALSE Actinomyces sp._HMT_170 (SP260) -0.176139759312009 0.702681824795031 -0.25066787427352 0.802070900413852 1 FALSE Actinomyces sp._HMT_175 (SP262) -0.14384933041827 0.731773796924113 -0.196576224815532 0.84415917741939 1 FALSE Granulicatella elegans (SP264) 0.440716461164046 0.834112802312794 0.528365539939017 0.597245650354223 1 FALSE Slackia exigua (SP265) 2.33647438355019 1.09105447864059 2.14148278504053 0.0322351252763941 1 FALSE Prevotella pleuritidis (SP266) -0.706562745456628 0.687384808190843 -1.02789985614646 0.303996937243642 1 FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP27) 6.59739210327222 0.753833053666329 8.75179467281949 2.09986205839205e-18 5.69062617824246e-16 TRUE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP272) -0.0825536268958024 1.04911856639417 -0.0786885577476149 0.93728034685305 1 FALSE Lancefieldella parvula (SP275) -0.134241041880555 1.18548389178658 -0.11323733946165 0.909842393425501 1 FALSE Selenomonas sp._HMT_137 (SP276) 1.36981056496975 0.976591435640044 1.40264445803991 0.160722887475028 1 FALSE Prevotella sp._HMT_472 (SP277) 2.00102708035664 1.49868854511837 1.33518541052077 0.181815670659976 1 FALSE Mogibacterium vescum (SP278) 0.739599124549114 1.08059335902531 0.684437969539463 0.493698646612462 1 FALSE Olsenella uli (SP279) 1.67295999891211 1.23714118688651 1.35227896107995 0.176286092151022 1 FALSE Prevotella intermedia (SP28) 5.4552714775294 0.900804771668707 6.05599753587419 1.39550137866196e-09 3.4887534466549e-07 TRUE Streptococcus intermedius (SP280) -1.35314326630616 0.6792660377303 -1.99206671781729 0.0463637380899724 1 FALSE Bacteroidetes_[G-3] bacterium_HMT_281 (SP282) 2.53397594427684 1.14525607455862 2.21258459183763 0.0269262982823721 1 FALSE Rothia mucilaginosa (SP284) 0.732435912454058 1.07672687688131 0.680242992146273 0.49635061443911 1 FALSE Leptotrichia trevisanii (SP285) 0.0317532561451606 0.747998606527499 0.0424509562826214 0.966139207693009 1 FALSE Catonella sp._HMT_451 (SP286) 0.174265703342958 0.704709837590017 0.247287172744624 0.804685985246939 1 FALSE Selenomonas sputigena (SP29) 0.176949467100145 0.952966141968189 0.185682847802637 0.852693479870221 1 FALSE Prevotella sp._HMT_475 (SP296) 1.05992337384095 0.825690741005315 1.28368082770366 0.199253655410486 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP298) -1.36763200111146 0.687776791343845 -1.98848233660116 0.0467583706168813 1 FALSE Veillonella atypica (SP3) 1.20922178069261 1.1324544372606 1.06778846098013 0.285615944284949 1 FALSE Streptococcus gordonii (SP30) 3.48241224823449 0.724269113672894 4.80817445130937 1.52314821779965e-06 0.000336615756133723 TRUE Schaalia cardiffensis (SP301) 5.86261510287696 1.38315940036308 4.23856794910119 2.24950100316686e-05 0.00472395210665041 TRUE Leptotrichia sp._HMT_223 (SP302) -0.0855275923273191 0.699508824870859 -0.122268067658916 0.902686720537927 1 FALSE Neisseria bacilliformis (SP304) 1.07726444036311 0.883978326887166 1.21865481041439 0.222975236376941 1 FALSE Prevotella maculosa (SP31) 0.947468326699325 0.921989320012386 1.02763481759919 0.304121639765385 1 FALSE Treponema lecithinolyticum (SP313) -0.117336008975385 0.697957289279268 -0.168113451607547 0.866494027108579 1 FALSE Bacteroides heparinolyticus (SP315) 6.96623676137544 1.48719712432181 4.68413813303477 2.81140371961067e-06 0.000615697414594736 TRUE Peptoniphilus lacrimalis (SP316) 6.88091007350339 1.27653287278966 5.39031169519846 7.03355819261008e-08 1.68102040803381e-05 TRUE Gracilibacteria_(GN02)_[G-1] bacterium_HMT_872 (SP317) 0.0515023067782418 0.696422647159214 0.0739526593345657 0.94104805443487 1 FALSE Arachnia rubra (SP318) -1.05135565573791 0.679852077660541 -1.54644766160863 0.121996491008759 1 FALSE Selenomonas sp._HMT_134 (SP319) 0.772968894062967 0.770640005722094 1.00302201848279 0.31585023767677 1 FALSE Leptotrichia sp._HMT_215 (SP32) -1.63145175095874 0.697105370945794 -2.34032302569306 0.0192670673586502 1 FALSE Johnsonella ignava (SP320) -0.643567332700026 0.680183475507998 -0.946167256150078 0.344063284218528 1 FALSE Gracilibacteria_(GN02)_[G-1] bacterium_HMT_871 (SP325) 0.438406012068441 0.738390591612336 0.593731850118981 0.552691476812544 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP329) 0.0397563399362693 0.6828629997411 0.0582200821414288 0.953573324617025 1 FALSE Leptotrichia hongkongensis (SP33) -1.77852943726319 0.726363237681714 -2.44853999348812 0.0143436505066465 1 FALSE Cryptobacterium curtum (SP332) 0.17133661297045 0.76256465155525 0.224684703940852 0.822224564872213 1 FALSE Actinomyces timonensis (SP34) 4.13530921564235 1.21239538682873 3.41085858670175 0.000647586686733347 0.127574577286469 FALSE Prevotella micans (SP343) -0.48294261275081 0.685759945016792 -0.704244417102816 0.481280574314781 1 FALSE Streptococcus mitis (SP35) 4.95623472450069 0.698865846508664 7.09182563328948 1.32354212409537e-12 3.46768036512988e-10 TRUE Treponema sp._HMT_247 (SP352) -0.306769741305972 0.705255955480482 -0.434976463398984 0.663579511704773 1 FALSE Veillonella parvula (SP37) 3.39337091872474 0.731198050141131 4.64083693613485 3.47000875090169e-06 0.000752991898945667 TRUE Eikenella corrodens (SP4) 1.4010587324295 1.27325274323097 1.10037754866658 0.271167656452674 1 FALSE Capnocytophaga sp._HMT_336 (SP40) -0.751319943304387 0.689734896627685 -1.08928799597905 0.27602690463715 1 FALSE Lachnoanaerobaculum umeaense (SP41) 2.87745347322364 1.50504882973106 1.9118671875502 0.0558932312941079 1 FALSE Lachnoanaerobaculum gingivalis (SP42) -0.261850614746356 0.700271920186389 -0.373927052046668 0.708458589378999 1 FALSE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP43) 6.46507162677649 1.32623274651433 4.87476398374895 1.08938619429591e-06 0.000246201279910876 TRUE Porphyromonas pasteri (SP44) -1.42993283345979 0.950553449145209 -1.50431607475168 0.13250000202351 1 FALSE Treponema denticola (SP45) 4.38459929975333 0.684485846652598 6.40568292419153 1.49697783122957e-10 3.83226324794771e-08 TRUE Saccharibacteria_(TM7)_[G-2] bacterium_HMT_350 (SP46) 0.573543603906077 1.13739896470538 0.504258946687754 0.614079422314287 1 FALSE Neisseria sicca (SP47) 3.34517849334303 0.826221257868023 4.04876836741639 5.14878713766072e-05 0.0106065015035811 TRUE Prevotella histicola (SP48) -2.20798291604662 0.690360830653162 -3.19830271071087 0.00138239086430204 0.261271873353086 FALSE Aggregatibacter segnis (SP49) 8.17915437879005 1.29662811107204 6.30801870555435 2.82630064479418e-10 7.17880363777722e-08 TRUE Leptotrichia buccalis (SP5) -1.51578866389159 0.992940673409785 -1.52656518610153 0.126869169491874 1 FALSE Neisseria subflava (SP50) 4.52440453923981 0.78601427561718 5.7561353267881 8.60614036261583e-09 2.11711052920349e-06 TRUE Capnocytophaga gingivalis (SP51) -2.02074694166282 0.784150224726492 -2.57698955881527 0.00996649611165298 1 FALSE Actinomyces naeslundii (SP52) -1.05183713346061 0.816433074487789 -1.28833234018662 0.197630300075567 1 FALSE Tannerella sp._HMT_286 (SP53) -1.31919808204607 0.696538750993388 -1.89393351075538 0.0582338357982407 1 FALSE Tannerella serpentiformis (SP54) 0.795976654920639 1.10063459808585 0.723197922639312 0.469558294918999 1 FALSE Neisseria mucosa (SP55) 2.25746876834671 0.863134020519707 2.61543249910073 0.00891145336323268 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_155 (SP56) -1.13775028738587 0.688805359332147 -1.65177327959383 0.0985807777294091 1 FALSE Prevotella sp._HMT_300 (SP57) 2.30132726960497 1.34406988147036 1.71220804909892 0.0868583346357612 1 FALSE Alloprevotella tannerae (SP58) -1.23398095949534 0.929357114880761 -1.32777910637039 0.184251091232155 1 FALSE Klebsiella aerogenes (SP59) 14.2526719691954 0.899710086873694 15.8414051116404 1.61178602030138e-56 4.56135443745292e-54 TRUE Fusobacterium nucleatum_subsp._vincentii (SP6) 2.86161802533044 0.806768320271889 3.54701337847034 0.00038962480514422 0.0775353362236997 FALSE Fusobacterium sp._HMT_203 (SP60) -1.51627231815381 0.717292154239209 -2.11388387450304 0.0345251868426865 1 FALSE Streptococcus oralis_subsp._dentisani_clade_058 (SP61) 3.91376013741319 0.73138842402198 5.35113765663806 8.74030013276829e-08 2.08019143159885e-05 TRUE Lachnoanaerobaculum orale (SP62) 2.69681642150876 1.27162669588581 2.12076109304246 0.0339419123938722 1 FALSE Granulicatella adiacens (SP63) 4.58271163527985 0.739890050444923 6.19377383507739 5.87404974003212e-10 1.48026053448809e-07 TRUE Ottowia sp._HMT_894 (SP65) 6.43790045219247 1.1122341881076 5.78825981167345 7.11193501171142e-09 1.75664794789272e-06 TRUE Selenomonas sp._HMT_138 (SP66) 3.80143152819006 0.729085589370493 5.21397156055751 1.84839818333231e-07 4.36221971266424e-05 TRUE Gemella morbillorum (SP67) 1.74257677890549 1.16282820305381 1.49856769411779 0.133985818882528 1 FALSE Corynebacterium matruchotii (SP68) -2.26299521508111 0.687195829881957 -3.29308636152498 0.000990940316629807 0.190260540792923 FALSE Prevotella sp._HMT_317 (SP69) -1.0623143476678 1.04407853614209 -1.01746593852325 0.308931827874683 1 FALSE Fusobacterium sp._HMT_204 (SP7) -1.40194832827664 0.70138153550505 -1.99883837441932 0.0456258442646704 1 FALSE Leptotrichia sp._HMT_392 (SP70) -2.06066970111357 0.690502459269725 -2.9843046515619 0.00284223625096705 0.525813706428904 FALSE Tannerella forsythia (SP71) 4.20160734396366 0.69845245954866 6.01559531579105 1.79226806329395e-09 4.46274747760194e-07 TRUE Leptotrichia sp._HMT_219 (SP72) -0.760601776186029 0.683774925830807 -1.11235692835896 0.265984715915282 1 FALSE Scardovia wiggsiae (SP74) -2.81246674219216 0.69161802523489 -4.06650295332742 4.77238807324069e-05 0.00987884331160823 TRUE Selenomonas artemidis (SP76) -0.170256706336302 0.696046467829568 -0.244605373642943 0.806762002875899 1 FALSE Fretibacterium sp._HMT_360 (SP77) 1.82340043955938 1.16735331055863 1.56199534713856 0.118289084974641 1 FALSE Catonella morbi (SP79) 5.06014440879378 0.693117347628785 7.30055945952727 2.86573613870444e-13 7.62285812895382e-11 TRUE Treponema socranskii (SP8) 4.31411413034798 0.727387350143422 5.93097216977633 3.01146259017916e-09 7.46842722364432e-07 TRUE Treponema sp._HMT_270 (SP80) 1.50359780708929 0.9769276493393 1.53910866184018 0.123777770780007 1 FALSE Bacteroidetes_[G-3] bacterium_HMT_280 (SP81) 9.63277686187955 0.882670278359752 10.9132221827837 9.96600584774722e-28 2.76058361982598e-25 TRUE Prevotella saccharolytica (SP82) 2.83457579439083 0.773709644286111 3.66361698516276 0.00024867855982711 0.0502330690850762 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP83) 1.6122540448717 1.18340353288501 1.36238738525751 0.17307566269427 1 FALSE Prevotella nigrescens (SP84) -1.32168501047446 1.34735909532864 -0.980944883258524 0.326619922292277 1 FALSE Leptotrichia sp._HMT_221 (SP85) -0.0796370715131465 1.33347899167509 -0.0597212794579597 0.952377623426144 1 FALSE Bergeyella sp._HMT_900 (SP86) 1.32642982141541 1.20677160597565 1.09915564374173 0.271700182446521 1 FALSE Neisseria elongata (SP87) 5.66081107185107 0.777101248905307 7.28452190731309 3.22813019649067e-13 8.55454502070027e-11 TRUE Campylobacter showae (SP89) 6.36174856556671 0.711683787332312 8.93901010364899 3.92671947247084e-19 1.07199441598454e-16 TRUE Bacteroidales_[G-2] bacterium_HMT_274 (SP9) 4.82958433556007 0.7230116125018 6.67981572086859 2.39242893775718e-11 6.1963909487911e-09 TRUE Streptococcus constellatus (SP90) 2.47227890426053 1.19818677842471 2.06335017943605 0.0390793697368065 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP92) -0.764172253389245 0.790106451155084 -0.967176324496623 0.333455895562011 1 FALSE Parvimonas micra (SP93) 3.10750074705271 0.775474141505151 4.00722678002032 6.14358673375257e-05 0.0125943528041928 TRUE Selenomonas noxia (SP94) -2.01572748479298 0.690201675424197 -2.92049057046133 0.0034948077308564 0.636736947913916 FALSE Leptotrichia wadei (SP95) -1.70969011896983 0.746161668307917 -2.29131325232361 0.02194530268239 1 FALSE Porphyromonas endodontalis (SP96) 3.89238168714172 0.707282552403306 5.50329097461209 3.72766428365169e-08 9.05822420927361e-06 TRUE Capnocytophaga ochracea (SP98) -0.686534087023952 0.824732741043939 -0.832432196343926 0.405165035115232 1 FALSE Aggregatibacter sp._HMT_458 (SP99) -0.83080464593617 0.756593622173832 -1.0980857115199 0.272167063976302 1 FALSE Selenomonas sp._HMT_137_nov_95.611% (SPN103) 0.193629927930428 0.728965514565881 0.265622891702552 0.790529653719749 1 FALSE Bergeyella zoohelcum_nov_92.871% (SPN108) 4.61566161759797 1.05498032572978 4.37511629840595 1.21367753618034e-05 0.00259726992742593 TRUE Prevotella sp._HMT_305_nov_94.477% (SPN116) 5.19599570908532 1.04037574637056 4.99434529035492 5.90356937464341e-07 0.000136372452554263 TRUE Ottowia sp._HMT_894_nov_96.988% (SPN128) 6.78863596047541 0.770091350295954 8.81536451210167 1.19296288488685e-18 3.24485904689224e-16 TRUE Veillonellaceae_[G-1] bacterium_HMT_150_nov_97.260% (SPN129) 0.214234111405566 0.715580937533869 0.299384877612711 0.76464639925457 1 FALSE Selenomonas dianae_nov_97.533% (SPN13) 1.9020650040858 1.23456203937761 1.54067996861843 0.123394694385653 1 FALSE Capnocytophaga sp._HMT_863_nov_97.972% (SPN140) 0.16055962916847 0.696026179606469 0.230680445467223 0.817563066100046 1 FALSE Prevotella sp._HMT_300_nov_97.638% (SPN161) 2.55658261733441 1.11004672134883 2.3031306414093 0.0212714937580161 1 FALSE Streptococcus sanguinis_nov_97.893% (SPN217) 2.03648375835822 1.15941186102225 1.75648001096234 0.0790064816007101 1 FALSE Selenomonas infelix_nov_97.426% (SPN24) 3.37438116676444 1.15487285753707 2.9218637746503 0.00347943687384654 0.636736947913916 FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345_nov_97.934% (SPN246) 9.85139846597951 0.699171102805388 14.0901110278318 4.36874225164938e-45 1.22761657271348e-42 TRUE Peptidiphaga gingivicola_nov_96.571% (SPN282) -0.608212030843694 0.713458082751244 -0.852484603577972 0.393945180813503 1 FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351_nov_92.871% (SPN286) 4.88227252550255 1.16779656346921 4.18075603082666 2.90541464264886e-05 0.00604326245670964 TRUE Prevotella sp._HMT_305_nov_93.898% (SPN298) 6.44224941694837 1.2648414650948 5.09332560224496 3.51836690353012e-07 8.16261121618987e-05 TRUE Cardiobacterium hominis_nov_88.719% (SPN310) -1.07155829572369 0.679418725503622 -1.57716921171019 0.114756595224182 1 FALSE Selenomonas sp._HMT_137_nov_97.137% (SPN322) -0.679723146985159 0.680572606852852 -0.998751845344435 0.317914918599237 1 FALSE Selenomonas flueggei_nov_97.701% (SPN34) -0.0890110952911853 0.683100865939195 -0.1303044685338 0.896325544835642 1 FALSE Actinomyces sp._HMT_171_nov_96.929% (SPN341) -0.519493061893884 0.694552054861911 -0.74795410690588 0.454487839710883 1 FALSE Prevotella nanceiensis_nov_91.353% (SPN353) -0.419780534295909 0.701217030481408 -0.59864566325167 0.549409198699637 1 FALSE Selenomonas dianae_nov_97.909% (SPN365) 5.72285251925784 1.1852804564005 4.82826869232044 1.37725184109442e-06 0.000307127160564055 TRUE Selenomonas sp._HMT_138_nov_97.524% (SPN375) 5.60930495982414 1.12980801426499 4.96483020920445 6.87612000484112e-07 0.000158150760111346 TRUE Leptotrichia wadei_nov_97.996% (SPN386) 0.776248341838823 1.15184704908786 0.673916161397931 0.50036461667168 1 FALSE Corynebacterium durum_nov_97.787% (SPN397) 1.63356489217278 1.20032357335074 1.36093710766059 0.173533565500782 1 FALSE Selenomonas infelix_nov_96.703% (SPN42) 4.26974634597373 1.19480358437061 3.57359686715612 0.000352110898905629 0.0704221797811257 FALSE Capnocytophaga gingivalis_nov_91.051% (SPN45) 1.2278108579623 1.33412324890949 0.920312916341053 0.357409261259978 1 FALSE Cardiobacterium hominis_nov_96.737% (SPN56) 0.00790789118619846 0.695677324468675 0.0113671826119072 0.990930495810619 1 FALSE Selenomonas noxia_nov_97.615% (SPN68) 3.44824861681262 0.861623998859114 4.00203409071531 6.28002473088396e-05 0.0128112504510033 TRUE Streptococcus gordonii_nov_96.303% (SPN80) 4.53807444583458 1.16428456536321 3.89773649916839 9.70959820321328e-05 0.019710484352523 TRUE Porphyromonas catoniae_nov_97.719% (SPN92) 0.745618825042405 1.09157868359496 0.683064662445415 0.494565983719799 1 FALSE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_103_bacterium_HMT_369 (SPP10) 6.30008779259105 1.21649783901393 5.17887298320051 2.2323038859793e-07 5.24591413205136e-05 TRUE Veillonella dispar_parvula (SPP14) 2.63325405380328 0.733068701067251 3.59209723450149 0.00032802740235454 0.0659335078732625 FALSE Streptococcus infantis_infantis_clade_638 (SPP16) -0.19143369908364 0.793199595684061 -0.241343666997896 0.809288769549105 1 FALSE Lachnoanaerobaculum gingivalis_umeaense (SPP17) -0.713651692170051 0.720094478759759 -0.99105285934034 0.321659769896952 1 FALSE Tannerella serpentiformis_sp._HMT_286 (SPP18) -1.59308536860888 0.701697105852438 -2.27033196420778 0.023187449061924 1 FALSE Enterobacter_Leclercia adecarboxylata_cloacae (SPP2) 11.3116921250449 0.841449336732352 13.4431054030801 3.37950984599917e-41 9.46262756879768e-39 TRUE Porphyromonas sp._HMT_275_sp._HMT_278 (SPP6) 2.61992219751122 1.42997799770416 1.83214161456856 0.0669303247678255 1 FALSE Prevotella sp._HMT_292_sp._HMT_300 (SPP9) 2.5599923667881 1.3584986960515 1.88442754801956 0.0595071664675001 1 FALSE