Taxon KO.D0.ORAL.A KO.D0.ORAL.B KO.D0.ORAL.C KO.D0.ORAL.D KO.D0.ORAL.E WT.D0.ORAL.A WT.D0.ORAL.B WT.D0.ORAL.C WT.D0.ORAL.D WT.D0.ORAL.E Bacteroides acidifaciens (SP1) 0 0 0 0 22 0 0 0 0 8 Faecalibaculum rodentium (SP10) 0 0 35 0 17 0 0 0 0 23 Eubacteriales_[G-2] bacterium_MOT-162 (SP11) 0 0 4 0 29 7 0 0 0 8 Oscillospiraceae_[G-4] bacterium_MOT-151 (SP12) 0 0 0 0 0 0 0 0 0 6 Duncaniella freteri (SP13) 0 0 0 0 12 0 0 0 0 7 Ligilactobacillus murinus (SP14) 1134 4654 562 144 425 74 1587 337 28 283 Limosilactobacillus reuteri (SP16) 0 12 138 0 317 46 0 0 0 144 Helicobacter ganmani (SP17) 5 4 17 0 23 18 0 0 0 14 Ileibacterium valens (SP20) 0 0 0 0 0 0 0 0 0 4 Rodentibacter pneumotropicus (SP21) 228 2204 445 545 316 375 225 749 501 75 Acutalibacter muris (SP23) 0 0 0 0 6 9 0 0 0 11 Muribaculum intestinale (SP24) 0 0 0 0 16 0 0 0 0 16 Peptococcaceae_[G-1] bacterium_MOT-146 (SP25) 0 0 0 0 20 0 0 0 0 7 Porphyromonas sp._MOT-131 (SP28) 0 0 0 20 0 0 0 0 0 0 Muribacter muris (SP29) 0 0 0 316 0 222 418 511 239 158 Romboutsia ilealis (SP3) 0 0 0 0 5 0 0 0 0 7 Parabacteroides goldsteinii (SP31) 0 0 0 0 3 0 0 0 0 0 Lactobacillus intestinalis (SP32) 13 23 31 9 59 12 4 0 8 56 Adlercreutzia caecimuris (SP36) 0 0 0 0 6 4 0 0 0 3 Prevotella sp._MOT-128 (SP37) 0 0 13 0 41 0 0 0 0 18 Rodentibacter heylii (SP38) 0 0 73 5 2013 0 18 99 11 62 Mollicutes_[G-1] bacterium_MOT-186 (SP39) 0 0 0 0 6 0 0 0 0 0 Carnobacteriaceae_[G-1] bacterium_MOT-198 (SP4) 22 26 265 18 145 557 157 513 21 21 Parvibacter caecicola (SP40) 0 0 5 0 0 0 0 0 0 0 Phocaeicola sartorii (SP42) 0 0 8 0 21 0 0 0 0 16 Corynebacterium mastitidis (SP43) 91 76 12 36 20 20 31 12 0 19 Muribacter sp._MOT-142 (SP45) 0 0 0 262 0 0 0 7 5 0 Erysipelotrichaceae_[G-1] bacterium_MOT-189 (SP5) 9 0 104 0 75 21 13 0 53 123 Lactobacillus johnsonii (SP54) 10 0 409 18 912 147 7 0 2 615 Muribaculaceae_[G-1] bacterium_MOT-129 (SP55) 19 0 34 0 43 0 0 0 4 27 Oscillospiraceae_[G-3] bacterium_MOT-150 (SP56) 4 0 26 0 11 0 0 0 0 0 Streptococcus acidominimus (SP58) 0 0 0 360 0 0 0 10 8 0 Lachnospiraceae_[G-11] bacterium_MOT-178 (SP6) 0 0 0 0 3 0 0 0 13 0 Streptococcus sp._MOT-012 (SP7) 98 577 337 30 392 133 182 1900 195 120 Akkermansia muciniphila (SP75) 0 0 25 0 8 0 0 0 0 0 Lachnospiraceae_[G-14] bacterium_MOT-185 (SP8) 0 0 0 0 33 0 0 0 30 0 Lachnospiraceae_[G-2] bacterium_MOT-167 (SP85) 0 0 2 0 0 0 0 0 0 0 Streptococcus danieliae (SP9) 5612 15103 5451 9567 4888 1970 15295 20116 5740 8100 Weeksellaceae_[G_1] bacterium_MOT-126 (SP92) 0 0 0 5 0 0 0 0 0 0 Helicobacter typhlonius (SP93) 12 0 123 0 132 54 0 0 0 27 Muribacter sp._MOT-143 (SP94) 0 0 0 842 0 511 1161 1208 501 234 Lachnospiraceae_[G-11] bacterium_MOT-177_nov_95.287% (SPN108) 0 0 0 0 29 11 0 0 0 10 Muribaculaceae_[G-1] bacterium_MOT-129_nov_93.228% (SPN109) 5 4 51 0 36 9 0 0 0 50 Enterocloster clostridioformis_nov_92.769% (SPN111) 0 0 13 0 28 19 0 0 0 44 Lachnospiraceae_[G-11] bacterium_MOT-176_nov_95.797% (SPN123) 5 0 8 0 28 9 0 0 0 11 Oscillospiraceae_[G-3] bacterium_MOT-150_nov_94.639% (SPN131) 0 0 4 0 17 8 0 0 4 11 Prevotellamassilia timonensis_nov_89.413% (SPN135) 0 0 8 0 35 0 0 0 0 15 Mailhella massiliensis_nov_91.242% (SPN136) 0 0 6 0 9 5 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_92.993% (SPN14) 0 0 91 0 49 0 0 0 0 11 Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.132% (SPN15) 8 0 8 0 19 0 0 0 0 7 Lachnospiraceae_[G-13] bacterium_MOT-181_nov_89.824% (SPN153) 0 0 15 0 30 22 0 0 0 20 Parasutterella excrementihominis_nov_96.122% (SPN159) 0 0 0 0 8 0 0 0 0 7 Prevotella shahii_nov_91.084% (SPN163) 0 0 6 0 47 0 0 0 0 17 Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.552% (SPN170) 0 0 7 0 0 0 0 0 0 0 Bacteroidetes_[G-3] bacterium_HMT_365_nov_87.206% (SPN182) 0 0 6 0 5 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.810% (SPN185) 0 0 0 0 0 0 0 0 0 4 Tidjanibacter massiliensis_nov_90.391% (SPN194) 0 0 8 0 16 0 0 0 0 5 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.701% (SPN2) 0 0 12 0 0 2 0 0 0 0 Bacteroidetes_[G-3] bacterium_HMT_365_nov_87.666% (SPN218) 0 0 0 0 24 6 0 0 0 11 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.463% (SPN219) 0 0 0 0 5 0 0 0 0 0 Oscillospiraceae_[G-3] bacterium_MOT-150_nov_95.045% (SPN228) 0 0 11 0 37 4 0 0 0 19 Muribaculaceae_[G-1] bacterium_MOT-129_nov_91.593% (SPN230) 0 4 10 0 11 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.542% (SPN242) 0 0 8 0 15 0 0 0 0 0 Lacrimispora saccharolytica_nov_91.495% (SPN250) 0 0 14 0 13 9 0 0 0 10 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.231% (SPN254) 4 0 3 0 22 4 0 0 0 10 Ihubacter massiliensis_nov_96.039% (SPN255) 0 0 8 0 0 0 0 0 0 0 Lachnospiraceae_[G-14] bacterium_MOT-182_nov_90.752% (SPN261) 0 7 10 0 54 4 0 0 0 19 Duncaniella freteri_nov_92.271% (SPN27) 0 0 0 0 10 0 0 0 0 4 Lachnospiraceae_[G-4] bacterium_MOT-169_nov_94.441% (SPN278) 0 0 6 0 20 4 0 0 0 15 Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351_nov_96.439% (SPN280) 0 0 0 0 6 0 0 0 0 4 Bacteroides uniformis_nov_96.825% (SPN281) 0 0 0 0 0 0 0 0 0 2 Duncaniella freteri_nov_91.090% (SPN282) 0 0 20 0 15 16 0 0 0 19 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.136% (SPN284) 0 0 21 0 65 16 0 0 0 37 Oscillospiraceae_[G-6] bacterium_MOT-153_nov_92.971% (SPN286) 0 0 0 0 32 0 0 0 5 17 Lachnospiraceae_[G-14] bacterium_MOT-185_nov_96.335% (SPN287) 0 5 112 0 440 109 0 0 0 95 Duncaniella freteri_nov_91.008% (SPN288) 6 2 0 0 0 6 0 0 6 0 Eubacterium xylanophilum_nov_92.240% (SPN289) 0 0 0 0 42 0 0 0 0 2 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.027% (SPN292) 0 0 0 0 10 0 0 0 0 0 Lachnospiraceae_[G-4] bacterium_MOT-169_nov_95.127% (SPN295) 6 0 0 0 0 0 0 0 0 0 Lachnospiraceae_[G-10] bacterium_MOT-175_nov_91.446% (SPN296) 0 0 22 0 92 12 0 0 0 23 Muribaculaceae_[G-1] bacterium_MOT-129_nov_93.694% (SPN300) 0 0 38 0 43 0 0 0 0 0 Lachnospiraceae_[G-12] bacterium_MOT-180_nov_95.782% (SPN302) 0 0 14 0 66 31 0 0 0 22 Mediterraneibacter [Ruminococcus] gnavus_nov_94.433% (SPN306) 0 0 23 0 45 21 0 0 0 41 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.126% (SPN307) 0 0 11 0 44 13 0 0 0 22 Oscillibacter valericigenes_nov_95.386% (SPN308) 0 0 5 0 22 0 0 0 0 10 Eubacteriales_[G-2] bacterium_MOT-162_nov_94.260% (SPN309) 0 2 5 0 11 0 0 0 0 0 Oscillibacter valericigenes_nov_94.219% (SPN310) 0 0 5 0 8 6 0 0 0 2 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.082% (SPN312) 0 4 19 0 48 10 0 0 0 31 Lachnospiraceae_[G-8] bacterium_MOT-173_nov_88.988% (SPN314) 0 0 17 0 80 46 0 0 0 19 Duncaniella freteri_nov_90.761% (SPN316) 0 0 0 0 5 0 0 0 0 0 Lachnospiraceae_[G-6] bacterium_MOT-171_nov_93.621% (SPN318) 0 0 9 0 3 5 0 0 0 10 Lachnospiraceae_[G-3] bacterium_MOT-168_nov_96.845% (SPN319) 0 0 9 0 10 4 0 0 3 0 Eubacterium coprostanoligenes_nov_94.861% (SPN320) 0 0 0 0 3 0 0 0 0 0 Alistipes senegalensis_nov_95.604% (SPN322) 0 0 2 0 0 0 0 0 0 0 Enterocloster bolteae_nov_93.210% (SPN323) 0 0 5 0 6 0 0 0 0 0 Mucispirillum schaedleri_nov_96.136% (SPN324) 0 0 84 0 30 0 3 0 4 20 Lachnospiraceae_[G-12] bacterium_MOT-180_nov_96.794% (SPN325) 0 0 14 0 66 13 0 0 0 30 Faecalimonas umbilicata_nov_92.686% (SPN326) 0 0 0 0 0 7 0 0 0 4 Roseburia intestinalis_nov_88.569% (SPN328) 0 0 11 0 15 15 0 0 0 25 Faecalicatena contorta_nov_92.181% (SPN329) 0 0 0 0 29 5 0 0 2 8 Turicibacter sanguinis_nov_97.503% (SPN334) 0 0 8 0 0 2 0 0 0 29 Eubacteriales_[G-3] bacterium_MOT-163_nov_85.157% (SPN336) 0 0 10 0 0 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.048% (SPN337) 0 0 20 0 14 0 0 0 0 8 Beduini massiliensis_nov_89.413% (SPN341) 0 0 3 0 0 0 0 0 0 0 Lachnospiraceae_[G-7] bacterium_MOT-172_nov_91.176% (SPN345) 0 0 0 0 0 0 0 0 0 3 Muribaculaceae_[G-1] bacterium_MOT-129_nov_89.775% (SPN347) 0 0 0 0 12 0 0 0 0 0 Adlercreutzia equolifaciens_nov_92.350% (SPN348) 0 0 0 0 8 0 0 0 0 6 Lacrimispora saccharolytica_nov_93.333% (SPN349) 0 0 0 0 0 5 0 0 0 0 Paraeggerthella hongkongensis_nov_90.300% (SPN351) 0 0 4 0 0 0 0 0 0 0 Adlercreutzia equolifaciens_nov_91.562% (SPN353) 0 0 0 0 0 0 0 0 0 2 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.565% (SPN354) 0 5 0 0 0 0 0 0 0 0 Eubacterium oxidoreducens_nov_92.539% (SPN355) 0 0 0 0 0 5 0 0 0 12 Hungatella xylanolytica_nov_94.045% (SPN356) 0 0 7 0 16 13 0 0 0 12 Eubacterium xylanophilum_nov_92.177% (SPN358) 0 0 0 0 0 0 0 0 2 0 Lachnospiraceae_[G-10] bacterium_MOT-175_nov_89.145% (SPN360) 0 0 3 0 24 0 0 0 0 0 Oscillospiraceae_[G-3] bacterium_MOT-150_nov_90.391% (SPN361) 0 0 0 0 12 0 0 0 0 14 Anaerotignum lactatifermentans_nov_96.362% (SPN362) 0 0 0 0 7 0 0 0 0 7 Lachnospiraceae_[G-10] bacterium_MOT-175_nov_89.933% (SPN363) 0 0 5 0 54 8 0 0 0 6 Oscillospiraceae_[G-2] bacterium_MOT-149_nov_93.132% (SPN365) 0 0 0 0 17 4 0 0 0 3 Mordavella massiliensis_nov_92.730% (SPN366) 0 0 29 0 38 19 0 0 0 16 Eubacteriales_[G-4] bacterium_MOT-164_nov_97.785% (SPN367) 0 0 3 0 0 0 0 0 0 0 Caproiciproducens galactitolivorans_nov_91.253% (SPN368) 0 0 0 0 11 0 0 0 0 6 Eubacterium xylanophilum_nov_91.287% (SPN369) 0 0 0 0 24 5 0 0 0 3 Eisenbergiella massiliensis_nov_90.373% (SPN371) 0 0 0 0 15 0 0 0 0 0 Lawsonibacter asaccharolyticus_nov_94.722% (SPN372) 0 0 0 0 5 0 0 0 0 3 Lacrimispora amygdalina_nov_91.078% (SPN374) 0 0 3 0 0 0 0 0 0 4 Alistipes senegalensis_nov_95.658% (SPN377) 0 0 21 0 4 0 0 0 0 7 Acutalibacter muris_nov_97.598% (SPN378) 0 2 9 0 17 12 0 0 0 11 Duncaniella freteri_nov_93.493% (SPN38) 0 0 0 0 11 0 0 0 0 0 Lachnospiraceae_[G-11] bacterium_MOT-178_nov_93.568% (SPN382) 0 0 8 0 55 12 0 0 0 8 Lachnospiraceae_[G-11] bacterium_MOT-177_nov_94.726% (SPN383) 0 0 0 0 14 0 0 0 0 9 Lachnospiraceae_[G-10] bacterium_MOT-175_nov_93.805% (SPN384) 0 0 0 0 12 0 0 0 0 0 Flavonifractor plautii_nov_93.823% (SPN385) 0 0 0 0 0 0 0 0 0 7 Lachnospiraceae_[G-11] bacterium_MOT-177_nov_96.783% (SPN387) 0 0 17 0 33 11 0 0 0 18 Lacrimispora celerecrescens_nov_93.664% (SPN388) 0 0 8 0 0 0 0 0 2 8 Lachnospiraceae_[G-10] bacterium_MOT-175_nov_89.153% (SPN390) 0 0 17 0 42 15 0 0 0 19 Oscillospiraceae_[G-2] bacterium_MOT-149_nov_94.574% (SPN391) 0 0 0 0 0 0 0 0 0 9 Anaerotaenia torta_nov_88.866% (SPN392) 0 0 4 0 37 12 0 0 0 38 Lachnospiraceae_[G-2] bacterium_MOT-167_nov_93.033% (SPN394) 0 0 0 0 7 0 0 0 0 0 Mollicutes_[G-2] bacterium_MOT-188_nov_87.231% (SPN397) 0 0 0 0 0 0 0 0 0 3 Eubacterium xylanophilum_nov_92.376% (SPN398) 0 0 0 0 12 0 0 0 0 3 Mollicutes_[G-2] bacterium_MOT-187_nov_97.281% (SPN399) 0 0 0 0 3 0 0 0 0 6 Desulfovibrio desulfuricans_nov_92.438% (SPN43) 0 0 34 0 10 3 0 0 0 9 Defluviitalea saccharophila_nov_82.903% (SPN50) 13 11 166 0 192 67 0 0 0 238 Parabacteroides merdae_nov_95.530% (SPN62) 0 0 8 0 10 0 0 0 0 6 Oscillospiraceae_[G-1] bacterium_MOT-147_nov_97.735% (SPN65) 0 0 0 0 0 5 0 0 0 0 Mediterraneibacter [Ruminococcus] gnavus_nov_94.983% (SPN74) 0 0 18 0 24 0 0 0 0 9 Adlercreutzia caecimuris_nov_91.655% (SPN76) 0 0 9 0 0 0 0 0 0 0 Culturomica massiliensis_nov_91.758% (SPN87) 0 0 4 0 0 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_93.360% (SPN98) 0 0 0 0 9 3 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.252% (SPN99) 0 0 5 0 8 0 0 0 0 10 Staphylococcus saprophyticus_xylosus (SPP5) 20 0 11 38 0 0 26 0 15 4 Gloeobacter multispecies_sppn7_2_nov_83.225% (SPPN7) 0 0 13 0 4 0 0 0 0 5 Lacrimispora multispecies_sppn8_2_nov_93.191% (SPPN8) 0 0 5 0 0 0 0 0 0 0