Taxon KO.D10.ORAL.A KO.D10.ORAL.B KO.D10.ORAL.C KO.D10.ORAL.D KO.D10.ORAL.E WT.D10.ORAL.A WT.D10.ORAL.B WT.D10.ORAL.C WT.D10.ORAL.D WT.D10.ORAL.E Bacteroides acidifaciens (SP1) 0 0 52 0 0 0 0 0 0 0 Faecalibaculum rodentium (SP10) 17 176 412 28 0 0 367 64 185 834 Eubacteriales_[G-2] bacterium_MOT-162 (SP11) 0 0 0 0 4 0 0 0 0 0 Oscillospiraceae_[G-4] bacterium_MOT-151 (SP12) 0 0 0 0 2 0 0 0 0 0 Ligilactobacillus murinus (SP14) 70 521 260 77 406 494 1689 467 773 204 Limosilactobacillus reuteri (SP16) 0 7 0 0 0 0 0 0 0 0 Helicobacter ganmani (SP17) 0 2 0 0 0 0 0 0 0 0 Ileibacterium valens (SP20) 159 553 0 302 49 0 0 0 0 0 Rodentibacter pneumotropicus (SP21) 2432 7934 4870 1962 2523 3785 4321 5912 2948 7393 Muribaculum intestinale (SP24) 0 0 0 0 3 0 0 0 0 0 Adlercreutzia mucosicola (SP27) 0 0 0 0 0 0 0 0 2 0 Porphyromonas sp._MOT-131 (SP28) 0 0 0 4837 8057 0 0 0 0 0 Muribacter muris (SP29) 0 0 0 14 0 0 0 0 0 0 Parabacteroides goldsteinii (SP31) 0 39 205 0 0 0 0 0 0 9 Lactobacillus intestinalis (SP32) 0 14 0 0 6 0 0 0 0 0 Blautia hominis (SP34) 0 0 136 0 0 0 0 0 0 0 Parabacteroides distasonis (SP35) 0 14 30 0 0 0 2 0 3 0 Prevotella sp._MOT-128 (SP37) 0 0 0 0 0 0 0 0 0 3 Rodentibacter heylii (SP38) 2641 3401 2528 7191 13430 7 3038 2443 3656 2706 Carnobacteriaceae_[G-1] bacterium_MOT-198 (SP4) 292 670 398 461 760 0 214 60 298 164 Bifidobacterium pseudolongum (SP41) 8 15 43 0 10 0 0 0 0 0 Phocaeicola sartorii (SP42) 37 474 352 57 30 10 124 8 170 68 Corynebacterium mastitidis (SP43) 8 18 9 29 20 0 14 0 0 18 Erysipelotrichaceae_[G-1] bacterium_MOT-189 (SP5) 221 1112 590 73 19 211 799 1122 386 1040 Enterococcus gallinarum (SP52) 0 0 27 815 1517 1292 178 482 164 0 Lactobacillus johnsonii (SP54) 4 24 11 0 0 0 0 0 0 0 Muribaculaceae_[G-1] bacterium_MOT-129 (SP55) 0 5 0 13 0 0 0 20 12 0 Lachnospiraceae_[G-3] bacterium_MOT-168 (SP57) 0 0 13 50 36 0 12 0 23 0 Streptococcus acidominimus (SP58) 0 0 0 8436 14004 0 0 0 0 0 Erysipelatoclostridium [Clostridium] cocleatum (SP64) 0 13 15 4 0 0 7 8 9 12 Ruminococcus gauvreauii (SP67) 0 0 0 111 0 0 0 0 0 0 Escherichia fergusonii (SP69) 0 0 0 21 467 33 0 0 40 0 Streptococcus sp._MOT-012 (SP7) 6887 18509 13547 0 41 3837 10384 11291 12454 11391 Escherichia marmotae (SP71) 0 0 0 8 82 0 0 0 0 0 Akkermansia muciniphila (SP75) 0 0 3 0 0 0 0 0 0 0 Lachnospiraceae_[G-14] bacterium_MOT-185 (SP8) 0 0 0 0 0 0 0 0 0 13 Alistipes timonensis (SP81) 0 94 74 8 6 0 43 0 35 8 Alistipes sp._MOT-127 (SP82) 0 0 0 0 0 0 0 0 10 0 Mollicutes_[G-2] bacterium_MOT-188 (SP89) 0 0 0 0 0 0 0 0 4 0 Streptococcus danieliae (SP9) 84 120 81 22 133 33 154 171 166 318 Weeksellaceae_[G_1] bacterium_MOT-126 (SP92) 0 0 0 604 765 0 0 377 481 0 Muribacter sp._MOT-143 (SP94) 0 0 0 0 10 0 0 5 0 0 Muribaculaceae_[G-1] bacterium_MOT-129_nov_93.228% (SPN109) 0 149 0 8 0 0 6 19 11 21 Mailhella massiliensis_nov_91.242% (SPN136) 0 42 32 86 7 0 0 0 41 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_92.993% (SPN14) 0 85 0 0 0 0 0 0 0 12 Gluceribacter canis_nov_92.397% (SPN142) 0 0 0 0 0 0 43 32 47 8 Parasutterella excrementihominis_nov_96.122% (SPN159) 0 0 0 0 0 5 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.552% (SPN170) 0 0 0 0 0 0 0 0 2 0 Bacteroidetes_[G-3] bacterium_HMT_365_nov_87.666% (SPN218) 0 0 0 2 0 0 4 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.463% (SPN219) 0 0 0 0 0 0 0 0 4 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.542% (SPN242) 0 0 0 0 0 0 3 0 0 0 Lacrimispora saccharolytica_nov_91.495% (SPN250) 0 0 0 0 0 0 0 0 0 2 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.231% (SPN254) 0 0 0 0 0 0 3 0 0 0 Ihubacter massiliensis_nov_96.039% (SPN255) 2 12 6 0 0 0 8 10 4 0 Duncaniella freteri_nov_92.271% (SPN27) 0 9 0 0 0 0 0 0 0 0 Lachnospiraceae_[G-4] bacterium_MOT-169_nov_94.441% (SPN278) 0 5 10 16 0 0 0 0 0 0 Bacteroides uniformis_nov_96.825% (SPN281) 9 21 0 24 0 0 50 0 56 25 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.136% (SPN284) 0 5 0 0 0 0 0 0 0 0 Duncaniella freteri_nov_91.008% (SPN288) 0 18 7 4 0 0 0 0 0 0 Olsenella massiliensis_nov_94.126% (SPN291) 9 23 55 155 16 6 33 35 47 80 Lachnospiraceae_[G-4] bacterium_MOT-169_nov_95.127% (SPN295) 0 4 0 8 4 0 0 0 0 0 Faecalicatena contorta_nov_94.303% (SPN297) 0 11 3 0 0 0 0 11 0 14 Muribaculaceae_[G-1] bacterium_MOT-129_nov_93.694% (SPN300) 0 8 0 0 0 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.211% (SPN305) 0 6 0 0 0 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_91.082% (SPN312) 0 15 0 0 0 0 0 0 0 0 Lachnospiraceae_[G-8] bacterium_MOT-173_nov_88.988% (SPN314) 0 0 0 0 2 0 0 0 0 0 Lachnospiraceae_[G-3] bacterium_MOT-168_nov_96.845% (SPN319) 0 0 0 0 0 0 0 10 10 0 Alistipes senegalensis_nov_95.604% (SPN322) 0 0 0 0 0 0 0 0 5 0 Mucispirillum schaedleri_nov_96.136% (SPN324) 0 0 3 0 0 0 4 0 0 0 Neglectibacter timonensis_nov_96.655% (SPN330) 0 0 0 0 0 0 0 0 0 2 Alistipes putredinis_nov_94.697% (SPN333) 0 0 4 0 0 0 0 0 0 0 Longibaculum muris_nov_94.364% (SPN340) 0 0 0 0 0 0 0 11 0 0 Clostridium merdae_nov_94.317% (SPN346) 23 143 88 0 0 0 0 0 0 0 Eubacterium xylanophilum_nov_92.177% (SPN358) 0 0 0 0 0 0 0 0 5 0 Mordavella massiliensis_nov_92.730% (SPN366) 0 0 3 0 6 0 0 0 7 0 Alistipes shahii_nov_97.378% (SPN376) 0 0 0 0 0 0 4 0 0 3 Alistipes senegalensis_nov_95.658% (SPN377) 0 22 11 3 0 0 0 0 2 0 Duncaniella freteri_nov_93.493% (SPN38) 0 3 0 0 0 0 0 0 0 0 Lacrimispora celerecrescens_nov_93.664% (SPN388) 0 4 0 0 0 0 0 0 0 4 Mollicutes_[G-2] bacterium_MOT-188_nov_87.231% (SPN397) 0 0 0 0 0 0 0 0 2 0 Prevotella sp._MOT-128_nov_91.581% (SPN401) 0 11 0 0 0 0 0 0 0 0 Parabacteroides merdae_nov_95.530% (SPN62) 0 4 0 0 0 0 0 0 0 0 Mediterraneibacter [Ruminococcus] gnavus_nov_94.983% (SPN74) 0 0 0 18 0 0 10 20 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.736% (SPN86) 0 6 0 0 0 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_93.360% (SPN98) 0 0 0 0 0 0 2 0 0 0 Escherichia_Shigella fergusonii_flexneri (SPP3) 0 0 0 23 201 30 0 0 22 0 Staphylococcus saprophyticus_xylosus (SPP5) 0 0 0 0 0 0 0 0 6 0