taxon lfc_(Intercept) lfc_GroupBrain Male Non-perio se_(Intercept) se_GroupBrain Male Non-perio W_(Intercept) W_GroupBrain Male Non-perio p_(Intercept) p_GroupBrain Male Non-perio q_(Intercept) q_GroupBrain Male Non-perio diff_(Intercept) diff_GroupBrain Male Non-perio Fusobacterium nucleatum_subsp._vincentii (SP102) 0.141664760260077 -0.372357427575259 2.09804177179353 2.96897027680929 0.0675223735602622 -0.125416354108949 0.946165851143922 0.90019394163162 1 1 FALSE FALSE Acinetobacter radioresistens (SP105) 0.474805870364836 -1.03863964778478 1.8193528486498 2.57489025201952 0.260975143286364 -0.403372394986605 0.794111675965836 0.686674291321611 1 1 FALSE FALSE Streptococcus oralis_subsp._tigurinus_clade_071 (SP113) -1.0825925263179 2.0761571455807 1.86411319585031 2.63818326128811 -0.580754714213631 0.786964717745576 0.56140578022907 0.431302520348842 1 1 FALSE FALSE Lachnospiraceae_[G-14] bacterium_MOT-185 (SP116) 1.2548698449895 -2.59876759703411 2.02010719301485 2.85876633927684 0.621189731578901 -0.909052118506302 0.53447479483206 0.363322615396761 1 1 FALSE FALSE Campylobacter showae (SP119) -0.988944009355812 1.88886011165652 1.746471739836 2.47183352411878 -0.566252511734704 0.764153448533679 0.571222137489407 0.444775804040676 1 1 FALSE FALSE Enterobacter cloacae (SP12) -1.67248241654954 3.25593692604398 1.54514194103943 2.18714575661562 -1.08241344832336 1.48866938391989 0.279068855225086 0.13657445090031 1 1 FALSE FALSE Cetobacterium somerae (SP123) -1.14784510108448 2.20666229511385 1.94720276895896 2.75567573654229 -0.589484115050925 0.800769940327844 0.55553656502113 0.423264844149632 1 1 FALSE FALSE Enterobacter hormaechei (SP127) 0.940649466713476 -1.97032684048206 1.62509292792879 2.30019948029842 0.57882810917918 -0.856589551192507 0.562705162413312 0.391671762347033 1 1 FALSE FALSE Streptococcus gordonii (SP129) 0.582685324780477 -1.25439855661606 1.9273677520842 2.72762806898396 0.302321819045887 -0.459886217948814 0.762406746882317 0.645597893184793 1 1 FALSE FALSE Streptococcus oralis (SP13) 1.07575660236753 -2.24054111179017 2.18115663495083 3.08649994241337 0.493204653498802 -0.725916459936258 0.621867990134043 0.467889985288433 1 1 FALSE FALSE Shigella flexneri (SP130) 1.92858565756635 -3.9461992221878 1.69594821629845 2.40039140669436 1.13717249090049 -1.64398156533238 0.255466184471445 0.100180010318025 1 1 FALSE FALSE Fusobacterium periodonticum (SP132) -0.904815744840987 1.72060358262687 1.64270164796211 2.32509884580186 -0.550809543512344 0.740013090511634 0.581764241286677 0.459292051326156 1 1 FALSE FALSE Bifidobacterium longum (SP134) -0.772776064306957 1.45652422155881 1.4844124501164 2.10127159966682 -0.52059389844538 0.693163235913794 0.602649700706278 0.488207116955668 1 1 FALSE FALSE Pseudoramibacter alactolyticus (SP135) -0.802001545553268 1.51497518405143 1.51889502321924 2.15003152129303 -0.528016441750831 0.704629289872142 0.597487924278963 0.481040965941066 1 1 FALSE FALSE Agromyces mediolanus (SP136) -0.660006417872168 1.23098492868923 1.35492405595897 1.91816677408281 -0.487116908855115 0.641750730604663 0.62617548438147 0.521035044474407 1 1 FALSE FALSE Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP138) 1.06256563103594 -2.21415916912699 1.77560139005511 2.513023956451 0.598425771114635 -0.881073641754664 0.549555874290562 0.37827796259815 1 1 FALSE FALSE Streptococcus sp._HMT_064 (SP14) -0.787393661043475 1.48575941503184 1.50161655324195 2.12559900212294 -0.524363999147128 0.698983869275412 0.600025391233981 0.484562111707801 1 1 FALSE FALSE Bradyrhizobium pachyrhizi (SP140) -0.905443491973566 1.72185907689203 1.64346836857871 2.3261830163209 -0.550934541415365 0.740207913483662 0.581678547904258 0.459173846589248 1 1 FALSE FALSE Leucobacter chromiiresistens (SP143) 0.0581454978539066 -0.205318902762917 2.1336439281179 3.01931390951936 0.0272517345034217 -0.0680018404563974 0.978258952841521 0.945784169205487 1 1 FALSE FALSE Acinetobacter lwoffii (SP144) 1.27339450237764 -2.63581691181038 2.23176458397676 3.15806303699983 0.570577430755977 -0.834630873712522 0.568286120941835 0.403925573431402 1 1 FALSE FALSE Deinococcus geothermalis (SP145) 0.848746296591602 -1.78652050023831 1.51470758876121 2.14411030759896 0.5603367296032 -0.833222289873187 0.575249778930132 0.404719373764248 1 1 FALSE FALSE Selenomonas flueggei (SP146) -0.9085472439899 1.7280665809247 1.64726101979338 2.33154596141916 -0.551550260142659 0.741167709974226 0.581256522803865 0.458591759144123 1 1 FALSE FALSE Catonella sp._HMT_164 (SP147) -0.767125805694344 1.44522370433358 1.47778605486831 2.09190155590862 -0.519104780537875 0.690866021037901 0.603687674822582 0.489649741241064 1 1 FALSE FALSE Acinetobacter johnsonii (SP15) 0.208623214296864 -0.506274335648833 1.22617777696549 1.73610315703765 0.170141082488999 -0.291615353382975 0.864899185346214 0.770580735137798 1 1 FALSE FALSE Atlantibacter hermannii (SP157) -0.675642877075111 1.26225784709512 1.37250505857117 1.94302774986245 -0.492269862945702 0.649634492963094 0.622528581943198 0.515928346995015 1 1 FALSE FALSE Streptococcus oralis_subsp._dentisani_clade_058 (SP159) 0.930030164315791 -1.94908823568669 1.6121897401308 2.28195390312855 0.576873888454554 -0.854131292053924 0.564024650912111 0.393032247391534 1 1 FALSE FALSE Aggregatibacter aphrophilus (SP161) 0.915528268150853 -1.92008444335681 1.59462838774734 2.25712150332328 0.574132678927269 -0.850678370893978 0.565878021052842 0.394948041278261 1 1 FALSE FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP165) 0.931485777643917 -1.95199946234294 1.61395626007373 2.28445182688541 0.57714437540046 -0.854471711493372 0.563841929489141 0.392843676952151 1 1 FALSE FALSE Streptococcus mutans (SP166) 1.17956873169384 -2.44816537044278 1.92349100461042 2.72214616483153 0.613243695378104 -0.899351181825425 0.539715216658403 0.368465633392475 1 1 FALSE FALSE Butyrivibrio sp._HMT_080 (SP168) -0.817568408068001 1.5461089090809 1.53739897194796 2.17619688287447 -0.531786753461986 0.710463709073368 0.594873698329048 0.477416627986795 1 1 FALSE FALSE Johnsonella sp._HMT_166 (SP171) 0.989110089878341 -2.06724808681179 1.68441854766619 2.38408803949815 0.58721158779021 -0.867102243106316 0.557061610836441 0.385885991687881 1 1 FALSE FALSE Prevotella sp._HMT_304 (SP176) 0.835107960216996 -1.7592438274891 1.49859239249976 2.12132270127764 0.557261577195103 -0.829314571719583 0.577348723417036 0.406926427467112 1 1 FALSE FALSE Janibacter melonis (SP18) -1.6037192823113 3.1184106575675 1.52238807781625 2.15497085021466 -1.05342343761107 1.44707788379452 0.292146967009896 0.14787511145085 1 1 FALSE FALSE Prevotella melaninogenica (SP180) -0.804316397580045 1.51960488810499 1.52164075404323 2.15391410248482 -0.528584947164997 0.705508583815819 0.597093404741962 0.480493791981315 1 1 FALSE FALSE Dialister pneumosintes (SP185) 0.929297562403618 -1.94762303186234 1.61130092139817 2.28069708092339 0.576737436230868 -0.853959540770669 0.564116838989021 0.393127407351344 1 1 FALSE FALSE Corynebacterium matruchotii (SP186) 1.02578707067447 -2.14060204840405 1.72976881650179 2.44821496957835 0.593019749742618 -0.874352160657167 0.553167935058733 0.381926501469763 1 1 FALSE FALSE Limosilactobacillus reuteri (SP19) -0.728492203351456 1.36795649964781 1.43284817317214 2.02835698939606 -0.508422467216935 0.674416045498536 0.611157099887128 0.500046844416691 1 1 FALSE FALSE Thermicanus aegyptius (SP192) -0.8833671827709 1.67770645848669 1.61657871053071 2.28816006750393 -0.546442420042075 0.733212017075728 0.584761857584745 0.463429127071506 1 1 FALSE FALSE Staphylococcus warneri (SP195) -0.895104260153657 1.70118061325221 1.63085574751664 2.30834831570019 -0.548855569547867 0.736968767530297 0.583104571277653 0.461141342810487 1 1 FALSE FALSE Rothia dentocariosa (SP196) 1.0520071131059 -2.1930421332669 1.76240867156491 2.49436894705852 0.596914399071687 -0.879197175643581 0.550564533261283 0.379294375560172 1 1 FALSE FALSE Actinomyces sp._HMT_448 (SP197) 1.11018228291058 -2.30939247287626 1.83542737683359 2.59762029627589 0.604863094515796 -0.889041587866843 0.545269966568486 0.373980729540389 1 1 FALSE FALSE Actinomyces sp._HMT_414 (SP201) -0.755215978363986 1.42140404967287 1.46386297435381 2.07221362046943 -0.515906195863284 0.68593509647469 0.605919926491042 0.492754037240344 1 1 FALSE FALSE Streptococcus sinensis (SP22) -0.772776064306957 1.45652422155881 1.4844124501164 2.10127159966682 -0.52059389844538 0.693163235913794 0.602649700706278 0.488207116955668 1 1 FALSE FALSE Porphyromonas endodontalis (SP25) 0.148398151719068 -0.38582421049324 2.16172016276844 3.05901549585521 0.0686481785547206 -0.126126922539624 0.945269668351322 0.899631456539712 1 1 FALSE FALSE Cutibacterium acnes (SP26) -1.01417797296297 1.93932803887083 2.7661804306041 3.91377459029336 -0.366634786994529 0.495513472768873 0.713891456232398 0.620237714186867 1 1 FALSE FALSE Klebsiella pneumoniae (SP3) 0.695476962090609 -1.47998183123632 1.09164292378598 1.5458307833265 0.637091989456216 -0.957402224874525 0.524064926086265 0.338364275913428 1 1 FALSE FALSE Enterococcus faecalis (SP30) -0.670591985492556 1.25215606393001 1.36681178612034 1.93497701142831 -0.490624965560193 0.647116764971655 0.623691725478425 0.517556375733888 1 1 FALSE FALSE Proteus mirabilis (SP31) -2.92094067356094 5.75285344006677 1.14218713306604 1.61731979849534 -2.55732234149764 3.55702900899309 0.0105481422990034 0.000375072751534489 1 0.0356319113957765 FALSE TRUE Sphingobacterium multivorum (SP33) 1.58664790334522 -3.26232371374554 1.63111914377648 2.30872076752653 0.972735749806539 -1.41304386378465 0.330684652563349 0.157642827262404 1 1 FALSE FALSE Bacteroidetes_[G-5] bacterium_HMT_511 (SP35) -0.894436256587401 1.6998446061197 1.63004201134762 2.307197663354 -0.548719757135544 0.736757250199626 0.583197785406712 0.461269984641175 1 1 FALSE FALSE Shigella sonnei (SP4) -0.660006417872168 1.23098492868923 1.35492405595897 1.91816677408281 -0.487116908855115 0.641750730604663 0.62617548438147 0.521035044474407 1 1 FALSE FALSE Fusobacterium nucleatum (SP44) 1.13394973104894 -2.35692736915299 1.86547983364088 2.64011574632434 0.607859549377061 -0.892736378105537 0.543280629878813 0.371998364248077 1 1 FALSE FALSE Pseudomonas putida (SP45) 0.904825002695137 -1.89867791244538 1.58171228595019 2.23885765087309 0.572054102843094 -0.848056557639986 0.567285321923216 0.396406473711366 1 1 FALSE FALSE Prevotella buccae (SP47) 0.953196643450234 -1.99542119395557 1.64038474341116 2.32182265942432 0.581081144090669 -0.859420156770426 0.561185766273631 0.390108752942428 1 1 FALSE FALSE Chryseobacterium gambrini (SP5) 0.106712721221844 -0.302453349498792 0.957116495235206 1.35549815891247 0.111493973568619 -0.223130771156085 0.911224644201804 0.823433730082048 1 1 FALSE FALSE Enemella evansiae (SP52) 1.08038953447233 -2.24980697599977 1.79793355044101 2.54460250426372 0.600906264976993 -0.884148692076663 0.547902420188544 0.376615951140499 1 1 FALSE FALSE Microbacterium maritypicum (SP57) 0.32188665491597 -0.732801216887044 2.27171352033024 3.21455369695395 0.141693330622594 -0.227963594940546 0.887322243180646 0.819674542411123 1 1 FALSE FALSE Staphylococcus ureilyticus (SP6) -1.04129326293248 1.99355861880986 1.81198240124965 2.56446814078171 -0.574670737538259 0.777377026880194 0.565514001539366 0.436936362196105 1 1 FALSE FALSE Gemella morbillorum (SP61) -1.54909618953589 3.00916447201668 1.47179176605934 2.08342533471251 -1.0525240222559 1.44433516377102 0.292559195078154 0.148644719015668 1 1 FALSE FALSE Muribaculaceae_[G-1] bacterium_MOT-129 (SP70) -0.668007954403228 1.24698800175135 1.36390433922375 1.9308656458616 -0.489776251304706 0.64581810983276 0.624292237625741 0.51839715825595 1 1 FALSE FALSE Acidovorax temperans (SP74) 0.845136047128072 -1.77930000131125 1.51043449595301 2.13806796707906 0.559531743609202 -0.83219992474891 0.575798873306487 0.405296106354878 1 1 FALSE FALSE Alloprevotella sp._HMT_473 (SP75) 0.955721944287001 -2.00047179562911 1.64346836857871 2.3261830163209 0.581527434637226 -0.859980397756088 0.560885033675068 0.38979984806691 1 1 FALSE FALSE Rhodococcus qingshengii (SP76) 1.01361979325793 -2.11626749357096 2.33812128088467 3.30845929444364 0.433518911762526 -0.639653477715475 0.664637829979701 0.522397907000733 1 1 FALSE FALSE Enterobacter cancerogenus (SP79) 0.208241274268069 -0.505510455591243 0.898693259476184 1.27276498859536 0.231715629412248 -0.397175016692696 0.816758891223713 0.691238404046739 1 1 FALSE FALSE Lawsonella clevelandensis (SP80) 2.09628613840633 -4.28160018386776 1.78152710893999 2.52140315239211 1.17667933756766 -1.69810217767267 0.239323517970366 0.089488478656781 1 1 FALSE FALSE Campylobacter sp._HMT_044 (SP81) 0.914728906106937 -1.91848571926898 1.59366241994347 2.2557555888828 0.57397909033921 -0.850484746097487 0.565981950896242 0.395055637593353 1 1 FALSE FALSE Acidovorax ebreus (SP82) -0.789918961880242 1.49081001670538 1.50459747429126 2.12981415883087 -0.525003514479734 0.69997187807397 0.599580747790969 0.483944866983039 1 1 FALSE FALSE Staphylococcus saccharolyticus (SP91) -0.888993596091725 1.68895928512835 1.62341722829043 2.29782998025309 -0.547606358118975 0.735023609075863 0.583962222727515 0.462325115842121 1 1 FALSE FALSE Leptotrichia sp._HMT_219 (SP92) -0.775530947965492 1.46203398887588 1.48764809201984 2.10584695136666 -0.521313442423417 0.694273621322312 0.60214843820637 0.487510630434689 1 1 FALSE FALSE Enterococcus casseliflavus (SP97) -0.18614221029529 0.283256513535475 1.75111337412796 2.47839696922111 -0.106299348200677 0.114290211395996 0.915344848722018 0.909007741828734 1 1 FALSE FALSE Streptococcus sanguinis (SP98) -0.812174193984329 1.53532048091355 1.53097655207881 2.16711531519678 -0.530494208341423 0.708462752372799 0.59576932351612 0.478657935093948 1 1 FALSE FALSE Duncaniella freteri_nov_90.184% (SPN118) 1.00707992812768 -2.10318776331046 1.70659168990276 2.4154416640492 0.590111820001339 -0.870725960644696 0.555115684899132 0.383903800093782 1 1 FALSE FALSE Leptotrichia hofstadii_nov_96.970% (SPN132) 1.31225214556805 -2.71353219819121 2.09437321232592 2.9637827142222 0.626560795299096 -0.915563811466297 0.53094717379835 0.359895719320986 1 1 FALSE FALSE Duncaniella freteri_nov_90.612% (SPN164) 0.98337139047476 -2.05577068800462 1.67735677792078 2.37410244320314 0.586262507427747 -0.865914903499691 0.557699122082309 0.386536829540975 1 1 FALSE FALSE Duncaniella freteri_nov_93.699% (SPN191) -0.86996711186456 1.65090631667402 1.60033324052726 2.26518837676615 -0.54361622306735 0.728816346405103 0.586705593625783 0.466114011070269 1 1 FALSE FALSE Muribaculaceae_[G-1] bacterium_MOT-129_nov_90.816% (SPN194) 1.02823809523942 -2.14550409753395 1.73281242557401 2.45251874530176 0.593392614263377 -0.874816594835024 0.55291843054779 0.381673706295943 1 1 FALSE FALSE Phocea massiliensis_nov_90.129% (SPN207) 0.967804527960027 -2.02463696297516 1.65824925236995 2.34708371658175 0.583630311653601 -0.86261812847639 0.559469062173806 0.388347459724551 1 1 FALSE FALSE Acutalibacter muris_nov_96.289% (SPN217) 0.977428027074946 -2.043883961205 1.67005320133836 2.36377492374985 0.585267598835561 -0.864669449137998 0.558367797747593 0.387220242325941 1 1 FALSE FALSE Duncaniella freteri_nov_93.712% (SPN259) 1.48968597119667 -3.06839984944843 1.95603232153206 2.7681611572791 0.76158556011481 -1.10846142081715 0.44630739574839 0.267662591573297 1 1 FALSE FALSE Oscillospiraceae_[G-2] bacterium_MOT-149_nov_93.319% (SPN297) 1.98494716001901 -4.05892222709313 1.70740234405422 2.41658795848341 1.16255384498639 -1.67960872801849 0.245010566324709 0.0930334684043121 1 1 FALSE FALSE Lachnospiraceae_[G-3] bacterium_MOT-168_nov_94.792% (SPN316) -0.745689576057328 1.40235124505955 1.45277038737296 2.05652811810795 -0.513287978980463 0.681902295773006 0.607749891531638 0.495300733648409 1 1 FALSE FALSE Duncaniella freteri_nov_89.919% (SPN320) -0.796069721369484 1.50311153568386 1.51186859754768 2.14009584984509 -0.526546898758759 0.702357109749391 0.598508275666142 0.482456485969311 1 1 FALSE FALSE Duncaniella freteri_nov_89.135% (SPN322) -0.58112513379768 1.07322236054026 1.26837371881945 1.79577502861806 -0.458165543148092 0.597637423083088 0.646833512989523 0.550081888060987 1 1 FALSE FALSE Alistipes senegalensis_nov_93.089% (SPN333) -0.847601100981608 1.60617429490811 1.57335195732531 2.22703582793908 -0.538723136317524 0.721216190039692 0.590077907007706 0.470776512224776 1 1 FALSE FALSE Actinomyces sp._HMT_169_nov_97.992% (SPN337) 0.893386918296955 -1.87580174364901 1.56795308723016 2.2194016178821 0.569779112380938 -0.845183552420326 0.568827524247453 0.398008364041081 1 1 FALSE FALSE Natroniella acetigena_nov_80.992% (SPN340) -0.834703323712371 1.58037874036964 1.55787171356151 2.20514616237645 -0.535797213882346 0.716677546066376 0.592098707950496 0.473573083763016 1 1 FALSE FALSE Veillonellaceae_[G-1] bacterium_HMT_129_nov_96.356% (SPN380) -0.747315605214889 1.40560330337467 1.45466092103412 2.05920143410778 -0.513738696357928 0.682596311411224 0.607434693487536 0.49486196552791 1 1 FALSE FALSE Chryseobacterium yeoncheonense_nov_97.484% (SPN52) 0.156262486764377 -0.40155288058386 0.869559933088177 1.23144756385447 0.179702951824634 -0.326081996806251 0.857385775951037 0.744362317719481 1 1 FALSE FALSE Lachnoclostridium [Clostridium] polysaccharolyticum_nov_92.083% (SPN86) 1.03615724117401 -2.16134238940312 1.74265692309348 2.46643923062598 0.59458475586501 -0.876300685849282 0.552121072387085 0.380866592304359 1 1 FALSE FALSE Duncaniella freteri_nov_91.039% (SPN88) -0.75052083220287 1.41201375735064 1.45839095360908 2.06447589802557 -0.514622523093385 0.683957491923768 0.606816823032058 0.494002008371253 1 1 FALSE FALSE Veillonella dispar_parvula (SPP10) -1.67471707294946 3.26040623884382 1.55448900050938 2.20036287255064 -1.07734250445046 1.48175843153743 0.281327280008815 0.138404583322693 1 1 FALSE FALSE Staphylococcus argenteus_aureus_roterodami (SPP2) -0.623497490195054 1.157967073335 1.31440240075301 1.86086526315774 -0.47435814925312 0.622273463996005 0.635244531586631 0.533762066853174 1 1 FALSE FALSE Streptococcus infantis_infantis_clade_638 (SPP6) -0.942884522173357 1.79674113729161 1.68941150903858 2.3911482667006 -0.558114181849002 0.751413520572199 0.576766417055399 0.452403828230332 1 1 FALSE FALSE Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP7) -0.807729486137302 1.5264310652195 1.52569291733942 2.15964403368642 -0.529418126647571 0.706797528393579 0.596515426399759 0.479692310754642 1 1 FALSE FALSE Staphylococcus capitis_epidermidis (SPP8) -1.67532360684822 3.26161930664134 1.56448752996092 2.21450118555652 -1.07084497304371 1.47284604222131 0.284239141484572 0.140792554147068 1 1 FALSE FALSE