QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Phocaeicola sartorii (SP132) 11
Faecalicatena multispecies_sppn7_2_nov_91.858% (SPPN7) 1
Bacteroides rodentium_nov_92.057% (SPN122) 1
Treponema sp. HMT234 (SP238) 1
Oscillospiraceae_[G-3] bacterium_MOT-150_nov_90.722% (SPN12) 1
Prevotella shahii_nov_87.602% (SPN118) 1
Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.600% (SPN117) 1
Methylococcus thermophilus_nov_81.186% (SPN83) 1
Lachnospiraceae_[G-6] bacterium_MOT-171_nov_94.770% (SPN9) 1
Enterococcus faecalis (SP37) 1
Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.978% (SPN13) 1
Fusobacterium nucleatum (SP13) 1
Streptococcus mitis (SP128) 1
Limosilactobacillus reuteri (SP65) 1
Faecalibaculum rodentium_nov_96.715% (SPN108) 0
Acinetobacter lwoffii_nov_96.289% (SPN15) 0
Flavobacterium antarcticum_nov_96.660% (SPN101) 0
Psychrobacter glacincola (SP99) 0
Fretibacterium sp. HMT362 (SP83) 0
Proteus mirabilis (SP8) 0
Duncaniella freteri_nov_89.113% (SPN120) 0
Lautropia mirabilis (SP78) 0
Arthrobacter psychrochitiniphilus (SP76) 0
Longibaculum muris_nov_93.568% (SPN124) 0
Duncaniella freteri_nov_89.718% (SPN127) 0
Acinetobacter pragensis_nov_97.510% (SPN109) 0
Actinomyces israelii_nov_94.882% (SPN20) 0
Actinomyces sp. HMT896 nov_96.586% (SPN18) 0
Enterobacter mori_nov_97.951% (SPN2) 0
Psychrobacter multispecies_sppn3_2_nov_97.119% (SPPN3) 0
Psychrobacter multispecies_spp9_2 (SPP9) 0
Psychrobacter multispecies_spp8_2 (SPP8) 0
Peptostreptococcaceae_[XI][G-4] multispecies_spp7_2 (SPP7) 0
Pseudomonas multispecies_spp5_2 (SPP5) 0
Staphylococcus multispecies_spp15_2 (SPP15) 0
Pseudomonas multispecies_spp14_2 (SPP14) 0
Staphylococcus multispecies_spp12_3 (SPP12) 0
Bacillus multispecies_spp11_2 (SPP11) 0
Lysinibacillus pakistanensis_nov_80.483% (SPN98) 0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_87.045% (SPN8) 0
Duncaniella freteri_nov_93.509% (SPN79) 0
Agathobaculum desmolans_nov_90.814% (SPN77) 0
Ligilactobacillus murinus_nov_96.477% (SPN63) 0
Duncaniella freteri_nov_92.915% (SPN4) 0
Parasutterella excrementihominis_nov_94.578% (SPN24) 0
Streptococcus danieliae (SP73) 0
Treponema denticola (SP74) 0
Porphyromonas gingivalis (SP1) 0
Porphyromonas catoniae (SP71) 0
Streptococcus thoraltensis (SP70) 0
Actinomyces sp. HMT414 (SP187) 0
Cutibacterium granulosum (SP186) 0
Ligilactobacillus murinus (SP18) 0
Enterobacter asburiae (SP173) 0
Klebsiella pneumoniae (SP17) 0
Carnobacterium gallinarum (SP163) 0
Akkermansia muciniphila (SP159) 0
Pseudomonas psychrophila (SP144) 0
Bacteroidales_[G-2] bacterium HMT274 (SP139) 0
Alloprevotella tannerae (SP138) 0
Pseudomonas fragi (SP129) 0
Kocuria rhizophila (SP126) 0
Psychrobacter cibarius (SP121) 0
Mogibacterium timidum (SP119) 0
Lactobacillus johnsonii (SP110) 0
Brochothrix thermosphacta (SP11) 0
Fusobacterium nucleatum_subsp._vincentii (SP102) 0
Acinetobacter lwoffii (SP189) 0
Erysipelotrichaceae_[G-1] bacterium_MOT-189 (SP19) 0
Vagococcus salmoninarum (SP192) 0
Pseudomonas marginalis (SP36) 0
Prevotella oulorum (SP10) 0
Enterobacter kobei (SP61) 0
Arthrobacter psychrolactophilus (SP60) 0
Psychrobacter urativorans (SP56) 0
Pseudomonas weihenstephanensis (SP54) 0
Acinetobacter johnsonii (SP42) 0
Cutibacterium acnes (SP41) 0
Veillonella parvula (SP33) 0
Bacteroides caccae (SP195) 0
Shigella sonnei (SP241) 0
Cellvibrio ostraviensis (SP240) 0
Curtobacterium pusillum (SP229) 0
Streptococcus chosunense (SP218) 0
Streptococcus downei (SP217) 0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP205) 0
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP197) 0
Enterobacter mori (SP7) 0
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Female Brain Genotype- SPM+ Treated Female Brain Genotype- SPM+ Treated Female Brain Genotype- SPM+ Treated Female Brain Genotype- SPM+ Treated Female Brain Genotype- SPM+ Treated Female Ligature Genotype- SPM+ Treated Female Ligature Genotype- SPM+ Treated Female Ligature Genotype- SPM+ Treated Female Ligature Genotype- SPM+ Treated Female Ligature Genotype- SPM+ Treated
Phocaeicola sartorii (SP132) 1.0 1.00 1.0 1.00 1.0 392.0 477.0 562.0 9831.5 19101.0
Faecalicatena multispecies_sppn7_2_nov_91.858% (SPPN7) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 38.5 76.0
Bacteroides rodentium_nov_92.057% (SPN122) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 18.5 36.0
Treponema sp. HMT234 (SP238) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 11.0 21.0
Oscillospiraceae_[G-3] bacterium_MOT-150_nov_90.722% (SPN12) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 14.5 28.0
Prevotella shahii_nov_87.602% (SPN118) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 37.5 74.0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.600% (SPN117) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 43.5 86.0
Methylococcus thermophilus_nov_81.186% (SPN83) 1.0 2.00 3.0 4.00 5.0 1.0 1.0 1.0 1.0 1.0
Lachnospiraceae_[G-6] bacterium_MOT-171_nov_94.770% (SPN9) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 19.0 37.0
Enterococcus faecalis (SP37) 1.0 1.00 1.0 1.00 1.0 18957.0 25112.5 31268.0 37890.0 44512.0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.978% (SPN13) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 14.5 28.0
Fusobacterium nucleatum (SP13) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 29.0 57.0
Streptococcus mitis (SP128) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 14.5 28.0
Limosilactobacillus reuteri (SP65) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 27.5 54.0
Faecalibaculum rodentium_nov_96.715% (SPN108) 1.0 1.00 1.0 1.00 1.0 1.0 1796.5 3592.0 4839.5 6087.0
Acinetobacter lwoffii_nov_96.289% (SPN15) 1.0 473.50 946.0 1418.50 1891.0 1.0 1.0 1.0 1.0 1.0
Flavobacterium antarcticum_nov_96.660% (SPN101) 1.0 65.75 130.5 195.25 260.0 1.0 1.0 1.0 1.0 1.0
Psychrobacter glacincola (SP99) 1.0 158.50 316.0 473.50 631.0 1.0 1.0 1.0 1.0 1.0
Fretibacterium sp. HMT362 (SP83) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 5.0 9.0
Proteus mirabilis (SP8) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 8.5 16.0
Duncaniella freteri_nov_89.113% (SPN120) 1.0 93.25 185.5 277.75 370.0 1.0 1.0 1.0 1.0 1.0
Lautropia mirabilis (SP78) 1.0 304.00 607.0 910.00 1213.0 1.0 1.0 1.0 1.0 1.0
Arthrobacter psychrochitiniphilus (SP76) 1.0 698.75 1396.5 2094.25 2792.0 1.0 1.0 1.0 1.0 1.0
Longibaculum muris_nov_93.568% (SPN124) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 68.5 136.0
Duncaniella freteri_nov_89.718% (SPN127) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 59.5 118.0
Acinetobacter pragensis_nov_97.510% (SPN109) 1.0 59.25 117.5 175.75 234.0 1.0 1.0 1.0 1.0 1.0
Actinomyces israelii_nov_94.882% (SPN20) 1.0 406.75 812.5 1218.25 1624.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT896 nov_96.586% (SPN18) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 12.5 24.0
Enterobacter mori_nov_97.951% (SPN2) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 13713.5 27426.0
Psychrobacter multispecies_sppn3_2_nov_97.119% (SPPN3) 1.0 2.75 4.5 6.25 8.0 1.0 1.0 1.0 1.0 1.0
Psychrobacter multispecies_spp9_2 (SPP9) 1.0 289.50 578.0 866.50 1155.0 1.0 1.0 1.0 1.0 1.0
Psychrobacter multispecies_spp8_2 (SPP8) 1.0 25363.00 50725.0 76087.00 101449.0 1.0 1.0 1.0 1.0 1.0
Peptostreptococcaceae_[XI][G-4] multispecies_spp7_2 (SPP7) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 5.5 10.0
Pseudomonas multispecies_spp5_2 (SPP5) 1.0 30.75 60.5 90.25 120.0 1.0 1.0 1.0 1.0 1.0
Staphylococcus multispecies_spp15_2 (SPP15) 1.0 1.00 1.0 1.00 1.0 1.0 24.0 47.0 77.5 108.0
Pseudomonas multispecies_spp14_2 (SPP14) 1.0 3029.75 6058.5 9087.25 12116.0 1.0 1.0 1.0 1.0 1.0
Staphylococcus multispecies_spp12_3 (SPP12) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 235.0 469.0
Bacillus multispecies_spp11_2 (SPP11) 1.0 30.75 60.5 90.25 120.0 1.0 1.0 1.0 1.0 1.0
Lysinibacillus pakistanensis_nov_80.483% (SPN98) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 2.5 4.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_87.045% (SPN8) 1.0 541.75 1082.5 1623.25 2164.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_93.509% (SPN79) 1.0 83.75 166.5 249.25 332.0 1.0 1.0 1.0 1.0 1.0
Agathobaculum desmolans_nov_90.814% (SPN77) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 3.5 6.0
Ligilactobacillus murinus_nov_96.477% (SPN63) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 7.0 13.0
Duncaniella freteri_nov_92.915% (SPN4) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 24.5 48.0
Parasutterella excrementihominis_nov_94.578% (SPN24) 1.0 1.00 1.0 1.00 1.0 1.0 12.0 23.0 60.0 97.0
Streptococcus danieliae (SP73) 1.0 1.00 1.0 1.00 1.0 1.0 50.5 100.0 139.0 178.0
Treponema denticola (SP74) 1.0 327.75 654.5 981.25 1308.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas gingivalis (SP1) 1.0 67.25 133.5 199.75 266.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas catoniae (SP71) 1.0 357.00 713.0 1069.00 1425.0 1.0 1.0 1.0 1.0 1.0
Streptococcus thoraltensis (SP70) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 5.5 10.0
Actinomyces sp. HMT414 (SP187) 1.0 257.00 513.0 769.00 1025.0 1.0 1.0 1.0 1.0 1.0
Cutibacterium granulosum (SP186) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 3.0 5.0
Ligilactobacillus murinus (SP18) 1.0 1.00 1.0 1.00 1.0 136.0 1096.5 2057.0 3464.5 4872.0
Enterobacter asburiae (SP173) 1.0 1.00 1.0 1.00 1.0 1.0 44.5 88.0 11318.5 22549.0
Klebsiella pneumoniae (SP17) 1.0 1.00 1.0 1.00 1.0 620.0 93676.0 186732.0 235103.5 283475.0
Carnobacterium gallinarum (SP163) 1.0 208.75 416.5 624.25 832.0 1.0 1.0 1.0 1.0 1.0
Akkermansia muciniphila (SP159) 1.0 1.00 1.0 1.00 1.0 1.0 2.5 4.0 9.5 15.0
Pseudomonas psychrophila (SP144) 1.0 31.75 62.5 93.25 124.0 1.0 1.0 1.0 1.0 1.0
Bacteroidales_[G-2] bacterium HMT274 (SP139) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 4.0 7.0
Alloprevotella tannerae (SP138) 1.0 48.75 96.5 144.25 192.0 1.0 1.0 1.0 1.0 1.0
Pseudomonas fragi (SP129) 1.0 975.00 1949.0 2923.00 3897.0 1.0 1.0 1.0 1.0 1.0
Kocuria rhizophila (SP126) 1.0 539.00 1077.0 1615.00 2153.0 1.0 1.0 1.0 1.0 1.0
Psychrobacter cibarius (SP121) 1.0 12221.25 24441.5 36661.75 48882.0 1.0 1.0 1.0 1.0 1.0
Mogibacterium timidum (SP119) 1.0 191.75 382.5 573.25 764.0 1.0 1.0 1.0 1.0 1.0
Lactobacillus johnsonii (SP110) 1.0 1.00 1.0 1.00 1.0 1.0 21.0 41.0 93.0 145.0
Brochothrix thermosphacta (SP11) 1.0 14723.00 29445.0 44167.00 58889.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum_subsp._vincentii (SP102) 1.0 408.00 815.0 1222.00 1629.0 1.0 1.0 1.0 1.0 1.0
Acinetobacter lwoffii (SP189) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 3.5 6.0
Erysipelotrichaceae_[G-1] bacterium_MOT-189 (SP19) 1.0 101.00 201.0 301.00 401.0 1.0 1.0 1.0 1.0 1.0
Vagococcus salmoninarum (SP192) 1.0 69.75 138.5 207.25 276.0 1.0 1.0 1.0 1.0 1.0
Pseudomonas marginalis (SP36) 1.0 255.50 510.0 764.50 1019.0 1.0 1.0 1.0 1.0 1.0
Prevotella oulorum (SP10) 1.0 466.50 932.0 1397.50 1863.0 1.0 1.0 1.0 1.0 1.0
Enterobacter kobei (SP61) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 28.0 55.0
Arthrobacter psychrolactophilus (SP60) 1.0 1008.00 2015.0 3022.00 4029.0 1.0 1.0 1.0 1.0 1.0
Psychrobacter urativorans (SP56) 1.0 546.50 1092.0 1637.50 2183.0 1.0 1.0 1.0 1.0 1.0
Pseudomonas weihenstephanensis (SP54) 1.0 3578.75 7156.5 10734.25 14312.0 1.0 1.0 1.0 1.0 1.0
Acinetobacter johnsonii (SP42) 167.0 344.75 522.5 700.25 878.0 1.0 1.0 1.0 18.5 36.0
Cutibacterium acnes (SP41) 1.0 63.75 126.5 189.25 252.0 1.0 9.0 17.0 6470.5 12924.0
Veillonella parvula (SP33) 1.0 378.75 756.5 1134.25 1512.0 1.0 1.0 1.0 29.0 57.0
Bacteroides caccae (SP195) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 10.0 19.0
Shigella sonnei (SP241) 1.0 115.00 229.0 343.00 457.0 1.0 1.0 1.0 8.0 15.0
Cellvibrio ostraviensis (SP240) 1.0 30.00 59.0 88.00 117.0 1.0 1.0 1.0 1.0 1.0
Curtobacterium pusillum (SP229) 1.0 210.50 420.0 629.50 839.0 1.0 1.0 1.0 1.0 1.0
Streptococcus chosunense (SP218) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 53.0 105.0
Streptococcus downei (SP217) 1.0 116.00 231.0 346.00 461.0 1.0 1.0 1.0 1.0 1.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP205) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 3.0 5.0
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP197) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 4.5 8.0
Enterobacter mori (SP7) 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 84235.0 168469.0
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