QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Streptococcus danieliae (SP73) 14
Klebsiella pneumoniae (SP17) 10
Treponema sp. HMT237 (SP66) 1
Fusobacterium sp. HMT203 (SP193) 1
Limosilactobacillus reuteri (SP65) 1
Prevotella shahii_nov_87.602% (SPN118) 1
Prevotella jejuni (SP57) 1
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.887% (SPN131) 1
Bacillus subtilis (SP35) 1
Bacteroidetes_[G-3] bacterium HMT280 (SP31) 1
Sphingomonas leidyi (SP30) 1
Duncaniella freteri_nov_93.293% (SPN35) 1
Sphingomonas oligophenolica (SP245) 1
Devosia insulae (SP227) 1
Pseudoramibacter alactolyticus (SP224) 1
Muribaculaceae_[G-1] bacterium_MOT-129_nov_83.636% (SPN5) 1
Enterococcus faecium_nov_88.222% (SPN99) 1
Acinetobacter radioresistens (SP148) 1
Jeotgalicoccus halotolerans (SP131) 1
Lacrimispora xylanolytica_nov_92.050% (SPN61) 1
Ihubacter massiliensis_nov_94.572% (SPN89) 1
Companilactobacillus mindensis_nov_85.039% (SPN82) 1
Streptococcus oralis_subsp._tigurinus_clade_070 (SP79) 1
Peptococcus sp. HMT167 nov_97.642% (SPN73) 1
Muribaculaceae_[G-2] bacterium_MOT-104_nov_86.600% (SPN7) 1
Parasutterella excrementihominis_nov_94.578% (SPN24) 0
Staphylococcus multispecies_spp12_3 (SPP12) 0
Staphylococcus multispecies_spp15_2 (SPP15) 0
Veillonellaceae_[G-1] bacterium HMT135 (SP96) 0
Duncaniella freteri_nov_89.775% (SPN10) 0
Mycolicibacillus trivialis_nov_84.855% (SPN107) 0
Raoultibacter massiliensis_nov_88.312% (SPN115) 0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.600% (SPN117) 0
Veillonella multispecies_spp10_2 (SPP10) 0
Duncaniella freteri_nov_93.699% (SPN72) 0
Prevotella oris (SP95) 0
Duncaniella freteri_nov_89.718% (SPN127) 0
Duncaniella freteri_nov_91.429% (SPN128) 0
Culturomica massiliensis_nov_89.613% (SPN51) 0
Duncaniella freteri_nov_90.612% (SPN132) 0
Alloprevotella sp. HMT473 nov_89.366% (SPN134) 0
Streptococcus azizii_nov_95.171% (SPN52) 0
Porphyromonas gingivalis (SP1) 0
Proteus mirabilis (SP8) 0
Streptococcus thoraltensis (SP70) 0
Staphylococcus ureilyticus (SP120) 0
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP127) 0
Fusobacterium nucleatum (SP13) 0
Phocaeicola sartorii (SP132) 0
Citrobacter koseri (SP142) 0
Triticum aestivum (SP146) 0
Campylobacter rectus (SP149) 0
Enterobacter hormaechei (SP15) 0
Prevotella nigrescens (SP172) 0
Streptococcus salivarius (SP174) 0
Ligilactobacillus murinus (SP18) 0
Tannerella sp. HMT808 (SP24) 0
Prevotella saccharolytica (SP29) 0
Prevotella sp. HMT317 (SP3) 0
Filifactor alocis (SP32) 0
Enterococcus faecalis (SP37) 0
Faecalibaculum rodentium (SP39) 0
Bulleidia extructa (SP4) 0
Cutibacterium acnes (SP41) 0
Acinetobacter johnsonii (SP42) 0
Actinidia eriantha (SP64) 0
Lactobacillus johnsonii (SP110) 0
Corynebacterium mastitidis (SP67) 0
Mammaliicoccus lentus (SP68) 0
Neisseriaceae_[G-1] bacterium_MOT-031 (SP69) 0
Acinetobacter multispecies_spp6_2 (SPP6) 0
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated
Streptococcus danieliae (SP73) 1.0 1.0 1.0 1.0 1.0 79.0 86.5 94.0 298.5 503.0
Klebsiella pneumoniae (SP17) 1.0 1.0 1.0 2033.5 4066.0 81404.0 118272.0 155140.0 177471.0 199802.0
Treponema sp. HMT237 (SP66) 1.0 1.0 1.0 197.5 394.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium sp. HMT203 (SP193) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 7.0 13.0
Limosilactobacillus reuteri (SP65) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 8.5 16.0
Prevotella shahii_nov_87.602% (SPN118) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.5 6.0
Prevotella jejuni (SP57) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 9.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.887% (SPN131) 1.0 1.0 1.0 99.0 197.0 1.0 1.0 1.0 1.0 1.0
Bacillus subtilis (SP35) 1.0 1.0 1.0 87.5 174.0 1.0 1.0 1.0 1.0 1.0
Bacteroidetes_[G-3] bacterium HMT280 (SP31) 1.0 1.0 1.0 301.0 601.0 1.0 1.0 1.0 1.0 1.0
Sphingomonas leidyi (SP30) 1.0 1.0 1.0 173.5 346.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_93.293% (SPN35) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 6.0 11.0
Sphingomonas oligophenolica (SP245) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 6.0 11.0
Devosia insulae (SP227) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.5 6.0
Pseudoramibacter alactolyticus (SP224) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.0 5.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_83.636% (SPN5) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.5 10.0
Enterococcus faecium_nov_88.222% (SPN99) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0
Acinetobacter radioresistens (SP148) 1.0 1.0 1.0 136.5 272.0 1.0 1.0 1.0 2.5 4.0
Jeotgalicoccus halotolerans (SP131) 1.0 1.0 1.0 240.5 480.0 1.0 2.0 3.0 4.0 5.0
Lacrimispora xylanolytica_nov_92.050% (SPN61) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.5 8.0
Ihubacter massiliensis_nov_94.572% (SPN89) 1.0 1.0 1.0 154.0 307.0 1.0 1.0 1.0 1.0 1.0
Companilactobacillus mindensis_nov_85.039% (SPN82) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 7.0 13.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP79) 1.0 1.0 1.0 129.0 257.0 1.0 1.0 1.0 1.0 1.0
Peptococcus sp. HMT167 nov_97.642% (SPN73) 1.0 1.0 1.0 206.5 412.0 1.0 1.0 1.0 1.0 1.0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_86.600% (SPN7) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0
Parasutterella excrementihominis_nov_94.578% (SPN24) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 302.0 603.0
Staphylococcus multispecies_spp12_3 (SPP12) 1.0 1.0 1.0 239.0 477.0 1.0 1.0 1.0 86.0 171.0
Staphylococcus multispecies_spp15_2 (SPP15) 1.0 1.0 1.0 1.0 1.0 11.0 20.0 29.0 30.5 32.0
Veillonellaceae_[G-1] bacterium HMT135 (SP96) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 9.0
Duncaniella freteri_nov_89.775% (SPN10) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.0 5.0
Mycolicibacillus trivialis_nov_84.855% (SPN107) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 3.0
Raoultibacter massiliensis_nov_88.312% (SPN115) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 3.0
Muribaculaceae_[G-2] bacterium_MOT-104_nov_90.600% (SPN117) 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0 8.0 12.0
Veillonella multispecies_spp10_2 (SPP10) 1.0 1.0 1.0 1301.0 2601.0 1.0 1.0 1.0 2.5 4.0
Duncaniella freteri_nov_93.699% (SPN72) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 7.0
Prevotella oris (SP95) 1.0 1.0 1.0 1433.5 2866.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_89.718% (SPN127) 1.0 365.0 729.0 730.0 731.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_91.429% (SPN128) 1.0 1.0 1.0 60.0 119.0 1.0 1.0 1.0 1.0 1.0
Culturomica massiliensis_nov_89.613% (SPN51) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 3.0
Duncaniella freteri_nov_90.612% (SPN132) 1.0 1.0 1.0 194.0 387.0 1.0 1.0 1.0 12.5 24.0
Alloprevotella sp. HMT473 nov_89.366% (SPN134) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 13.0 25.0
Streptococcus azizii_nov_95.171% (SPN52) 1.0 1.0 1.0 1.0 1.0 1.0 880.5 1760.0 6240.5 10721.0
Porphyromonas gingivalis (SP1) 1.0 1.0 1.0 261.5 522.0 1.0 3.5 6.0 24.5 43.0
Proteus mirabilis (SP8) 1.0 1.0 1.0 671.0 1341.0 1.0 48.5 96.0 291.0 486.0
Streptococcus thoraltensis (SP70) 1.0 1.0 1.0 104296.5 208592.0 139.0 17384.0 34629.0 45754.5 56880.0
Staphylococcus ureilyticus (SP120) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 115.0 229.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP127) 1.0 1.0 1.0 1015.5 2030.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum (SP13) 1.0 1.0 1.0 786.0 1571.0 1.0 1.0 1.0 4.5 8.0
Phocaeicola sartorii (SP132) 1.0 1.0 1.0 1.0 1.0 1.0 1880.5 3760.0 7439.5 11119.0
Citrobacter koseri (SP142) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 438.0 875.0
Triticum aestivum (SP146) 1.0 1.0 1.0 1.0 1.0 1.0 3.5 6.0 6.5 7.0
Campylobacter rectus (SP149) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 7.0
Enterobacter hormaechei (SP15) 1.0 1.0 1.0 483.0 965.0 1.0 1.0 1.0 39102.0 78203.0
Prevotella nigrescens (SP172) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0
Streptococcus salivarius (SP174) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 7.0
Ligilactobacillus murinus (SP18) 1.0 1.0 1.0 1.0 1.0 113.0 4897.0 9681.0 13571.0 17461.0
Tannerella sp. HMT808 (SP24) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 7.0
Prevotella saccharolytica (SP29) 1.0 1.0 1.0 559.5 1118.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT317 (SP3) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 7.0
Filifactor alocis (SP32) 1.0 1.0 1.0 785.0 1569.0 1.0 1.0 1.0 1.0 1.0
Enterococcus faecalis (SP37) 1.0 1.0 1.0 351.5 702.0 12.0 12378.5 24745.0 35523.5 46302.0
Faecalibaculum rodentium (SP39) 1.0 1.0 1.0 1.0 1.0 1.0 12.5 24.0 24.0 24.0
Bulleidia extructa (SP4) 1.0 1.0 1.0 5850.0 11699.0 1.0 1.0 1.0 1.0 1.0
Cutibacterium acnes (SP41) 1.0 1.0 1.0 1.0 1.0 1.0 16.5 32.0 546.0 1060.0
Acinetobacter johnsonii (SP42) 1.0 709.5 1418.0 1611.0 1804.0 1.0 1.0 1.0 4.0 7.0
Actinidia eriantha (SP64) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 18.0 35.0
Lactobacillus johnsonii (SP110) 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0 11.5 19.0
Corynebacterium mastitidis (SP67) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 34.5 68.0
Mammaliicoccus lentus (SP68) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 127.5 254.0
Neisseriaceae_[G-1] bacterium_MOT-031 (SP69) 1.0 1.0 1.0 1.0 1.0 26.0 559.0 1092.0 2383.5 3675.0
Acinetobacter multispecies_spp6_2 (SPP6) 1.0 1.0 1.0 962.5 1924.0 1.0 1.0 1.0 1.0 1.0
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