QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Klebsiella pneumoniae (SP17) 5
Streptococcus danieliae (SP73) 2
Treponema sp. HMT237 (SP66) 1
Limosilactobacillus reuteri (SP65) 1
Lactobacillus johnsonii (SP110) 1
Streptococcus oralis_subsp._tigurinus_clade_070 (SP79) 1
Acinetobacter radioresistens (SP148) 1
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.887% (SPN131) 1
Sphingomonas leidyi (SP30) 1
Duncaniella freteri_nov_89.775% (SPN10) 0
Streptococcus thoraltensis (SP70) 0
Proteus mirabilis (SP8) 0
Prevotella oris (SP95) 0
Porphyromonas gingivalis (SP1) 0
Neisseriaceae_[G-1] bacterium_MOT-031 (SP69) 0
Duncaniella freteri_nov_90.612% (SPN132) 0
Parasutterella excrementihominis_nov_94.578% (SPN24) 0
Streptococcus azizii_nov_95.171% (SPN52) 0
Veillonella multispecies_spp10_2 (SPP10) 0
Staphylococcus multispecies_spp12_3 (SPP12) 0
Staphylococcus multispecies_spp15_2 (SPP15) 0
Duncaniella freteri_nov_89.718% (SPN127) 0
Actinidia eriantha (SP64) 0
Mammaliicoccus lentus (SP68) 0
Acinetobacter johnsonii (SP42) 0
Cutibacterium acnes (SP41) 0
Bulleidia extructa (SP4) 0
Faecalibaculum rodentium (SP39) 0
Enterococcus faecalis (SP37) 0
Filifactor alocis (SP32) 0
Prevotella saccharolytica (SP29) 0
Ligilactobacillus murinus (SP18) 0
Enterobacter hormaechei (SP15) 0
Citrobacter koseri (SP142) 0
Phocaeicola sartorii (SP132) 0
Fusobacterium nucleatum (SP13) 0
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP127) 0
Staphylococcus ureilyticus (SP120) 0
Acinetobacter multispecies_spp6_2 (SPP6) 0
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Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Brain Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated Male Ligature Genotype+ SPM- Nontreated
Klebsiella pneumoniae (SP17) 1.0 1.0 1.0 2033.5 4066.0 81404.0 118272.0 155140.0 177471.0 199802.0
Streptococcus danieliae (SP73) 1.0 1.0 1.0 1.0 1.0 79.0 86.5 94.0 298.5 503.0
Treponema sp. HMT237 (SP66) 1.0 1.0 1.0 197.5 394.0 1.0 1.0 1.0 1.0 1.0
Limosilactobacillus reuteri (SP65) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 8.5 16.0
Lactobacillus johnsonii (SP110) 1.0 1.0 1.0 1.0 1.0 1.0 2.5 4.0 11.5 19.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP79) 1.0 1.0 1.0 129.0 257.0 1.0 1.0 1.0 1.0 1.0
Acinetobacter radioresistens (SP148) 1.0 1.0 1.0 136.5 272.0 1.0 1.0 1.0 2.5 4.0
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.887% (SPN131) 1.0 1.0 1.0 99.0 197.0 1.0 1.0 1.0 1.0 1.0
Sphingomonas leidyi (SP30) 1.0 1.0 1.0 173.5 346.0 1.0 1.0 1.0 1.0 1.0
Duncaniella freteri_nov_89.775% (SPN10) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.0 5.0
Streptococcus thoraltensis (SP70) 1.0 1.0 1.0 104296.5 208592.0 139.0 17384.0 34629.0 45754.5 56880.0
Proteus mirabilis (SP8) 1.0 1.0 1.0 671.0 1341.0 1.0 48.5 96.0 291.0 486.0
Prevotella oris (SP95) 1.0 1.0 1.0 1433.5 2866.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas gingivalis (SP1) 1.0 1.0 1.0 261.5 522.0 1.0 3.5 6.0 24.5 43.0
Neisseriaceae_[G-1] bacterium_MOT-031 (SP69) 1.0 1.0 1.0 1.0 1.0 26.0 559.0 1092.0 2383.5 3675.0
Duncaniella freteri_nov_90.612% (SPN132) 1.0 1.0 1.0 194.0 387.0 1.0 1.0 1.0 12.5 24.0
Parasutterella excrementihominis_nov_94.578% (SPN24) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 302.0 603.0
Streptococcus azizii_nov_95.171% (SPN52) 1.0 1.0 1.0 1.0 1.0 1.0 880.5 1760.0 6240.5 10721.0
Veillonella multispecies_spp10_2 (SPP10) 1.0 1.0 1.0 1301.0 2601.0 1.0 1.0 1.0 2.5 4.0
Staphylococcus multispecies_spp12_3 (SPP12) 1.0 1.0 1.0 239.0 477.0 1.0 1.0 1.0 86.0 171.0
Staphylococcus multispecies_spp15_2 (SPP15) 1.0 1.0 1.0 1.0 1.0 11.0 20.0 29.0 30.5 32.0
Duncaniella freteri_nov_89.718% (SPN127) 1.0 365.0 729.0 730.0 731.0 1.0 1.0 1.0 1.0 1.0
Actinidia eriantha (SP64) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 18.0 35.0
Mammaliicoccus lentus (SP68) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 127.5 254.0
Acinetobacter johnsonii (SP42) 1.0 709.5 1418.0 1611.0 1804.0 1.0 1.0 1.0 4.0 7.0
Cutibacterium acnes (SP41) 1.0 1.0 1.0 1.0 1.0 1.0 16.5 32.0 546.0 1060.0
Bulleidia extructa (SP4) 1.0 1.0 1.0 5850.0 11699.0 1.0 1.0 1.0 1.0 1.0
Faecalibaculum rodentium (SP39) 1.0 1.0 1.0 1.0 1.0 1.0 12.5 24.0 24.0 24.0
Enterococcus faecalis (SP37) 1.0 1.0 1.0 351.5 702.0 12.0 12378.5 24745.0 35523.5 46302.0
Filifactor alocis (SP32) 1.0 1.0 1.0 785.0 1569.0 1.0 1.0 1.0 1.0 1.0
Prevotella saccharolytica (SP29) 1.0 1.0 1.0 559.5 1118.0 1.0 1.0 1.0 1.0 1.0
Ligilactobacillus murinus (SP18) 1.0 1.0 1.0 1.0 1.0 113.0 4897.0 9681.0 13571.0 17461.0
Enterobacter hormaechei (SP15) 1.0 1.0 1.0 483.0 965.0 1.0 1.0 1.0 39102.0 78203.0
Citrobacter koseri (SP142) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 438.0 875.0
Phocaeicola sartorii (SP132) 1.0 1.0 1.0 1.0 1.0 1.0 1880.5 3760.0 7439.5 11119.0
Fusobacterium nucleatum (SP13) 1.0 1.0 1.0 786.0 1571.0 1.0 1.0 1.0 4.5 8.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP127) 1.0 1.0 1.0 1015.5 2030.0 1.0 1.0 1.0 1.0 1.0
Staphylococcus ureilyticus (SP120) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 115.0 229.0
Acinetobacter multispecies_spp6_2 (SPP6) 1.0 1.0 1.0 962.5 1924.0 1.0 1.0 1.0 1.0 1.0
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