taxon lfc_(Intercept) lfc_GroupPeri-implant Saliva se_(Intercept) se_GroupPeri-implant Saliva W_(Intercept) W_GroupPeri-implant Saliva p_(Intercept) p_GroupPeri-implant Saliva q_(Intercept) q_GroupPeri-implant Saliva diff_(Intercept) diff_GroupPeri-implant Saliva Streptococcus salivarius (SP1) -1.56216171332233 7.82619806017618 1.06679650476661 2.11499816935912 -1.46434836104388 3.70033325492081 0.143098789738386 0.000215316521207182 1 0.0131343077936381 FALSE TRUE Gemella sanguinis (SP103) -0.639833266949688 4.44432709014317 0.916861246962595 1.82963914096544 -0.697851794990078 2.42907302901164 0.485269883536271 0.0151374829014432 1 0.832561559579375 FALSE FALSE Campylobacter concisus (SP109) -0.0215290603213171 2.17721166583914 0.960372725500641 1.91241304279927 -0.0224174008170568 1.13846309197529 0.982114999994851 0.254927161955904 1 1 FALSE FALSE Actinomyces sp._HMT_169 (SP120) 0.492158249168148 0.293691531044431 1.13876785753273 2.25209383055717 0.432184879396283 0.130408212597329 0.665607048108886 0.896243469365003 1 1 FALSE FALSE Actinomyces israelii (SP126) 0.757516867346083 -0.679290068941329 1.34233882365521 2.64019729127376 0.564326125413962 -0.257287616795336 0.572532204659081 0.796956751134095 1 1 FALSE FALSE Prevotella pallens (SP139) 0.228147638355603 1.2617304373571 0.906357050795852 1.80966152205485 0.251719383829222 0.697219022441509 0.801257973208406 0.485665736108743 1 1 FALSE FALSE Capnocytophaga leadbetteri (SP14) 0.443425255245523 0.47237917542739 1.28105150136006 2.5233093692517 0.346141630351901 0.187206206731391 0.729236278441133 0.851498958603501 1 1 FALSE FALSE Prevotella melaninogenica (SP15) 0.576542165668509 -0.0157161627902219 1.05749886123458 2.0972926067229 0.545194124365699 -0.00749354798650578 0.585620012167531 0.994021069712057 1 1 FALSE FALSE Fusobacterium periodonticum (SP154) 0.0962671483219628 1.74529223414711 1.01976999218567 2.02545829468859 0.094400844366516 0.861677694733993 0.924790745094717 0.388864903216084 1 1 FALSE FALSE Lancefieldella parvula (SP16) -0.663499413665515 4.53110296143453 0.827420263376872 1.65959947354149 -0.801889249071128 2.73023885200771 0.422617025594744 0.00632884532282542 1 0.367073028723874 FALSE FALSE Streptococcus downii (SP166) -0.468471559285582 3.81600082870811 0.738387500507119 1.49048794444017 -0.634452179870108 2.56023595691772 0.525785765478675 0.0104601116318868 1 0.585766251385661 FALSE FALSE Gemella haemolysans (SP17) -1.11801065431261 6.19764417714055 0.686035501983923 1.3911161897334 -1.62966880151169 4.45515926195087 0.103171514565278 8.38309401744368e-06 1 0.000544901111133839 FALSE TRUE Rothia mucilaginosa (SP170) -1.30131973702217 6.86977748040891 1.34583572579126 2.64686766199795 -0.966923163120135 2.59543670393531 0.333582446282565 0.0094470801534495 1 0.538483568746621 FALSE FALSE Cutibacterium acnes (SP175) -0.36232640788688 3.4268019402462 0.381387995459965 0.810180628481417 -0.950020483602018 4.2296764693934 0.342101844629028 2.34027636595853e-05 1 0.00147437411055388 FALSE TRUE Streptococcus mitis (SP18) 0.0445506775142736 1.9349192937753 1.17118446203214 2.3138648350449 0.0380389929669774 0.836228315703566 0.969656592620905 0.403026471703647 1 1 FALSE FALSE Streptococcus anginosus (SP183) 0.341634704945279 0.84561119319495 1.3517098334648 2.65807281458642 0.252742634911206 0.318129431426627 0.800467099307117 0.75038675938803 1 1 FALSE FALSE Streptococcus oralis (SP184) 0.603911405781224 -0.116070043203512 1.28572228300712 2.53221628845596 0.469705949537376 -0.0458373337746307 0.638565116624272 0.963439902021279 1 1 FALSE FALSE Rothia dentocariosa (SP194) 0.622555088443096 -0.184430212963711 1.51516155989231 2.969975890463 0.410883634407504 -0.0620982188966388 0.681157863239404 0.950484615377423 1 1 FALSE FALSE Rothia aerolata (SP202) 0.549919781094627 0.0818992473140086 0.931495538786965 1.85747494942078 0.590362227403426 0.0440917102755799 0.554947828646605 0.964831300601912 1 1 FALSE FALSE Selenomonas artemidis (SP21) 0.619726268047907 -0.174057871514685 0.886920395750983 1.77270081331456 0.698739448339291 -0.0981879571596943 0.484714876086213 0.921783045048973 1 1 FALSE FALSE Actinomyces sp._HMT_170 (SP213) 0.586799659916047 -0.0533269750311969 1.44613256269336 2.83822818559661 0.405771694140653 -0.0187888258251467 0.684910358537355 0.985009567950684 1 1 FALSE FALSE Streptococcus gordonii (SP222) 0.445191121018185 0.465904334260966 1.45366932294106 2.85261107492356 0.30625336449797 0.163325571563747 0.759411744020565 0.870262101027395 1 1 FALSE FALSE Agrobacterium tumefaciens (SP226) 1.01861907588487 -1.63666483358353 0.763076259649136 1.53736736726913 1.33488503017146 -1.06458928973547 0.181913977994019 0.287061828628648 1 1 FALSE FALSE Veillonella parvula (SP23) -0.0175884517894936 2.16276276788912 0.994016757822795 1.97643761203607 -0.0176943211983847 1.09427322912616 0.98588271096709 0.273835162847973 1 1 FALSE FALSE Veillonella dispar (SP24) -0.0694371027839746 2.35287448820221 1.23826605262473 2.44173011309171 -0.0560760772184541 0.963609563393969 0.955281201558259 0.335241710346566 1 1 FALSE FALSE Acinetobacter lwoffii (SP245) 0.896246448812138 -1.18796520098353 0.713066732507959 1.44241983008026 1.25689000475441 -0.823591839358886 0.20879346837181 0.410171514404955 1 1 FALSE FALSE Bergeyella sp._HMT_322 (SP246) 0.464578525431745 0.394817184744579 1.12294976577703 2.22195663885926 0.413712651794604 0.17768896919036 0.679084560360193 0.858967248699791 1 1 FALSE FALSE Fusobacterium nucleatum (SP25) 0.195253774090055 1.38234127299744 1.39114350397606 2.73330214588033 0.140354876065622 0.505740382592141 0.888379608544178 0.613038915337883 1 1 FALSE FALSE Streptococcus infantis_clade_431 (SP251) -0.0277982857332633 2.20019882568294 1.01644625982531 2.0191310655777 -0.0273485051123516 1.08967608056361 0.97818176983422 0.275855856262362 1 1 FALSE FALSE Parascardovia denticolens (SP252) 0.462988154912215 0.400648543316184 0.588674587303058 1.20638586577039 0.786492511989247 0.332106463349793 0.43157900422415 0.739808869812659 1 1 FALSE FALSE Campylobacter gracilis (SP269) 0.940259036993648 -1.3493446909824 0.9837027649516 1.95680812065866 0.955836529584127 -0.689564130860317 0.339154829625711 0.49046833067381 1 1 FALSE FALSE Acinetobacter johnsonii (SP28) 1.18326506641632 -2.24036679886553 1.00534525289368 1.99799985595461 1.17697384357317 -1.12130478497714 0.239205946356019 0.262158149473235 1 1 FALSE FALSE Sphingobium yanoikuyae (SP327) 0.979453338521508 -1.49305712991789 0.884152353617758 1.76743767485169 1.10778796721379 -0.844758008252355 0.267953397924984 0.398245964277027 1 1 FALSE FALSE Microbacterium hydrothermale (SP339) 0.970162499923341 -1.45899072172461 0.855678801303727 1.71330656336148 1.13379284194628 -0.851564310161803 0.256881454274666 0.394455955389468 1 1 FALSE FALSE Novosphingobium silvae (SP343) 0.960140522619639 -1.42224347161103 0.830496247961957 1.66544482543221 1.15610458804098 -0.853972133986451 0.247638379608656 0.393120429520783 1 1 FALSE FALSE Veillonella atypica (SP37) -1.52577289707447 7.69277240060071 0.351531624096354 0.750823745952263 -4.34035743155859 10.2457766447491 1.42251137886023e-05 1.23627971804138e-24 0.000938857510047753 8.1594461390731e-23 TRUE TRUE Epilithonimonas hispanica (SP385) 0.883300908057285 -1.14049821821574 0.697354417822562 1.4125974586856 1.26664560441924 -0.807376660069144 0.205282038085221 0.419449509645602 1 1 FALSE FALSE Schaalia sp._HMT_180 (SP4) 0.668383417265752 -0.352467418646784 1.43579781480896 2.81850640407642 0.465513605308476 -0.125054680783059 0.641563696142202 0.900480261058366 1 1 FALSE FALSE Kingella oralis (SP408) 0.434720030257744 0.504298333715913 1.01596081175982 2.01820695575518 0.427890549739546 0.249874440417442 0.668730807692305 0.802684449932558 1 1 FALSE FALSE Leptotrichia sp._HMT_215 (SP43) 0.480677671993221 0.335786980685831 1.32899926087093 2.61475296118043 0.36168392725683 0.12842015504755 0.717588239257164 0.897816481795314 1 1 FALSE FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP46) 1.15888997630255 -2.15099146844837 1.32859108058751 2.61397440962708 0.872269875385646 -0.822881609141397 0.383061167675943 0.410575321976311 1 1 FALSE FALSE Schaalia lingnae_[Not_Validly_Published] (SP47) -0.0496304313848504 2.28025002640543 1.20471270626751 2.3777672416653 -0.0411969020718785 0.958987905312558 0.967138923366388 0.337564838185855 1 1 FALSE FALSE Streptococcus sp._HMT_423 (SP48) 1.12975763183158 -2.04417287205481 1.46545852164599 2.87511000576759 0.770924331971295 -0.710989446648691 0.440751783811686 0.477090775530967 1 1 FALSE FALSE Schaalia odontolyticus (SP5) -0.378491697392923 3.48607466843503 1.20114854445021 2.3709735954761 -0.315108151395353 1.47031357712569 0.752679539648294 0.141476845542865 1 1 FALSE FALSE Streptococcus sp._HMT_064 (SP50) -0.00505161585761595 2.11679436947224 1.48191307033169 2.90651413271365 -0.0034088476299661 0.728293162468095 0.997280138373497 0.466434147012524 1 1 FALSE FALSE Oribacterium sinus (SP51) 0.340353219749618 0.850309972245707 0.934747363040456 1.8636607397705 0.364112521957324 0.456257919749074 0.715773986551044 0.648204519867481 1 1 FALSE FALSE Prevotella oris (SP53) 0.267765884277058 1.11646353564509 0.967124254677001 1.92525969870461 0.276868130420828 0.579902823705443 0.781881364559513 0.561980151438899 1 1 FALSE FALSE Capnocytophaga gingivalis (SP54) 0.567903239525087 0.0159598997356552 1.05072053539755 2.08438538280321 0.54048933126658 0.00765688527051144 0.588859616567253 0.993890749154295 1 1 FALSE FALSE Haemophilus parainfluenzae (SP59) -0.102697571150586 2.47482953887979 1.67797764908871 3.28084447973081 -0.0612031818220942 0.754326989337468 0.951197395757879 0.450652899989573 1 1 FALSE FALSE Streptococcus sp._HMT_066 (SP60) 0.0922402612511409 1.76005748674012 0.95760780332082 1.90715223309092 0.0963236315861958 0.922872047758664 0.923263543058413 0.356073888911502 1 1 FALSE FALSE Lachnoanaerobaculum orale (SP64) 0.0909029500115612 1.76496096128525 0.91102346000786 1.81853618202267 0.0997811296876778 0.970539370474428 0.920518089602225 0.331777710383778 1 1 FALSE FALSE Streptococcus parasanguinis_clade_411 (SP65) -1.27325678546991 6.76687999138399 0.988349818642634 1.96565213567241 -1.28826530996744 3.44256232757541 0.197653624364626 0.000576231063067648 1 0.0345738637840589 FALSE TRUE Stomatobaculum longum (SP68) 0.890058988015235 -1.16527784472822 0.702089216694087 1.42158381888673 1.26772918149382 -0.819703931099024 0.204894679947395 0.412384908461617 1 1 FALSE FALSE Granulicatella adiacens (SP9) -0.273413657204938 3.10078852107908 0.53057272075477 1.09609144442352 -0.515317969638529 2.82895057420133 0.606330843938567 0.00467009107375917 1 0.275535373351791 FALSE FALSE Moraxella osloensis (SP93) 1.66414381931382 -4.00358889282302 0.997336054636907 1.98275522919767 1.66858884884059 -2.01920480847406 0.0951988903387441 0.0434659367610834 1 1 FALSE FALSE Prevotella histicola (SP94) -0.168560204276493 2.71632586034145 1.22826826512721 2.42267001531234 -0.137234030270281 1.12121165621941 0.890845813102009 0.262197779285744 1 1 FALSE FALSE Capnocytophaga sputigena (SP95) 0.602485163333838 -0.110840487563099 1.06038438387619 2.10278739343001 0.568176193930243 -0.0527112193602695 0.569915334561434 0.957961999697821 1 1 FALSE FALSE Leptotrichia sp._HMT_215_nov_97.614% (SPN106) 0.500254176132032 0.264006465510193 1.10357983873846 2.1850567759017 0.45330130052384 0.120823618142026 0.650331796474765 0.903830742576838 1 1 FALSE FALSE Streptococcus infantis_infantis_clade_638 (SPP1) -0.173594148521013 2.73478365590469 1.23194250321857 2.42967457476085 -0.14091091756919 1.12557610978576 0.887940317235167 0.260344984964699 1 1 FALSE FALSE Afipia birgiae_broomeae (SPP11) -0.1998269366889 2.83097054585361 0.348158858693524 0.74396700900536 -0.573953331070639 3.80523667257564 0.565999382494457 0.00014166866264204 1 0.00878345708380648 FALSE TRUE Veillonella denticariosi_dispar_parvula (SPP14) 0.53015139700237 0.154383322318951 0.663972600199381 1.3492496381384 0.798453726619402 0.11442161476653 0.424607235824298 0.908903580413459 1 1 FALSE FALSE Veillonella dispar_parvula (SPP15) -0.00985887092910002 2.13442097140101 1.21902533848671 2.40504996486801 -0.00808750287450036 0.887474689748556 0.993547176665122 0.374823387040399 1 1 FALSE FALSE Staphylococcus capitis_epidermidis (SPP19) -0.454136057529944 3.76343732227077 0.400602539317217 0.847621537201522 -1.13363249844589 4.43999728309878 0.256948735069527 8.99600134688875e-06 1 0.00057574408620088 FALSE TRUE Streptococcus infantis_infantis_clade_431_infantis_clade_638 (SPP2) 0.061726693569333 1.87194056824009 0.894805324012781 1.7876939440818 0.0689833776273455 1.04712586538495 0.945002850708597 0.295041531296157 1 1 FALSE FALSE Streptococcus parasanguinis_parasanguinis_clade_721 (SPP33) 0.418690374331889 0.563073738777382 0.849643974210749 1.7018357161029 0.492783315177182 0.330862570017502 0.622165701138636 0.740748295879353 1 1 FALSE FALSE Streptococcus multispecies_sppn6_2_nov_97.976% (SPPN6) -0.010009639641852 2.13497379001443 0.968088715577686 1.92709491518194 -0.0103395892140721 1.10787163268129 0.991750348392372 0.267917258241312 1 1 FALSE FALSE