taxon lfc_(Intercept) lfc_GroupPeri-implant II-IV BC Saliva se_(Intercept) se_GroupPeri-implant II-IV BC Saliva W_(Intercept) W_GroupPeri-implant II-IV BC Saliva p_(Intercept) p_GroupPeri-implant II-IV BC Saliva q_(Intercept) q_GroupPeri-implant II-IV BC Saliva diff_(Intercept) diff_GroupPeri-implant II-IV BC Saliva Streptococcus salivarius (SP1) -0.884089238971205 2.86687889853479 0.986720457773103 1.88942582809942 -0.895987543388406 1.51732809825014 0.370259416163259 0.129183867443623 1 1 FALSE FALSE Gemella sanguinis (SP103) -0.519775769041644 1.5310628421264 0.954244033173245 1.82723820954961 -0.544698998340267 0.837910916116288 0.58596055386915 0.402080737480518 1 1 FALSE FALSE Campylobacter concisus (SP109) -0.318548966083895 0.79323123128132 0.783100523752175 1.49952333907704 -0.406779150852293 0.528988919752031 0.684170200979639 0.596813136303206 1 1 FALSE FALSE Prevotella sp._HMT_309 (SP119) 0.401439382151388 -1.84672604558138 0.928947319177095 1.77879869011546 0.432144400294951 -1.03818720794173 0.665636466244264 0.29918290694293 1 1 FALSE FALSE Leptotrichia sp._HMT_417 (SP12) 0.530993208887489 -2.32175674361375 1.29679801122819 2.48317913846875 0.409464854426009 -0.934993656980165 0.682198553761684 0.349791568328227 1 1 FALSE FALSE Actinomyces sp._HMT_169 (SP120) 0.717956616865981 -3.00728923953489 1.29255238232313 2.4750493780624 0.555456495755771 -1.21504211842802 0.578582458936137 0.224350027780544 1 1 FALSE FALSE Streptococcus constellatus (SP127) 1.04989273627907 -4.22438834404955 1.28882778055256 2.46791730866092 0.81461057258476 -1.71172199701524 0.415295256689755 0.0869479128667277 1 1 FALSE FALSE Prevotella pallens (SP139) -0.0320791622926628 -0.257158049286532 0.532923516643823 1.02047084239127 -0.0601946832721641 -0.251999409100151 0.952000580172364 0.801041520536308 1 1 FALSE FALSE Mogibacterium diversum (SP140) -0.472625827238272 1.3581797221807 0.689053553010321 1.3194371006958 -0.685905798139311 1.02936299234308 0.492772513671323 0.303309132606602 1 1 FALSE FALSE Oribacterium sp._HMT_078 (SP146) 0.944806376282589 -3.83907169072912 1.08023714716701 2.06849665500614 0.874628667196273 -1.85597191150291 0.381775984418556 0.0634575617881004 1 1 FALSE FALSE Prevotella melaninogenica (SP15) -0.987391109068485 3.24565242222482 0.948344420892639 1.8159413121042 -1.04117353075067 1.78731129722687 0.297795018005003 0.0738871891186993 1 1 FALSE FALSE Fusobacterium periodonticum (SP154) 0.586410643973222 -2.52495400559477 0.967290965804785 1.85222118349862 0.606240174573871 -1.36320328699915 0.544355278733797 0.172818451622153 1 1 FALSE FALSE Alloprevotella sp._HMT_308 (SP155) -0.282855489658536 0.662355151055002 0.620160092337309 1.18751616710483 -0.45610076035768 0.557765165142829 0.648317523433234 0.577004752733933 1 1 FALSE FALSE Solobacterium moorei (SP156) -1.03521751619036 3.42101591500503 0.388298614108047 0.743535238102523 -2.66603453779597 4.6010138318869 0.00767518074776108 4.2043950429996e-06 0.552613013838798 0.000302716443095972 FALSE TRUE Lancefieldella parvula (SP16) -1.33283323432383 4.5122735481611 0.854819801693019 1.63685530077559 -1.5591978937363 2.75667222754696 0.118949549221901 0.00583928523409793 1 0.385392825450463 FALSE FALSE Gemella haemolysans (SP17) 0.138382466366434 -0.882184021036555 1.00948124272384 1.93300941311071 0.137082751525965 -0.456378543763474 0.890965386041591 0.648117792120115 1 1 FALSE FALSE Rothia mucilaginosa (SP170) -0.667849222852428 2.07399883943261 0.799200315385029 1.53035209295408 -0.835646845973378 1.35524292022832 0.403353606314273 0.175340174218076 1 1 FALSE FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP171) -0.227580578599082 0.459680477170339 0.631452340381255 1.20913917587439 -0.360408163918871 0.380171684403427 0.718541922360765 0.703817976644679 1 1 FALSE FALSE Streptococcus sp._HMT_061 (SP173) 0.400159201498305 -1.84203204985341 1.06088966380442 2.03144904492972 0.377192101262734 -0.906757693209646 0.706030849813534 0.364534946874243 1 1 FALSE FALSE Cutibacterium acnes (SP175) 0.115871421156135 -0.799643521932125 0.457243984603588 0.875555571435993 0.253412674759606 -0.913298422189964 0.799949334206343 0.36108561196592 1 1 FALSE FALSE Leptotrichia sp._HMT_212 (SP176) 0.813006291878189 -3.35580471457965 0.823769611295354 1.57739871280015 0.986934065945646 -2.12742960124681 0.323674962655045 0.03338440481997 1 1 FALSE FALSE Streptococcus mitis (SP18) -0.569049274282166 1.71173236134165 0.958034633071785 1.83449665574465 -0.593975681711631 0.933080120904788 0.552528378152989 0.350778602174299 1 1 FALSE FALSE Streptococcus anginosus (SP183) 1.05266139938585 -4.23454010877443 1.30276655789136 2.49460803520722 0.808019973347853 -1.69747713829627 0.419079084208274 0.0896064897306731 1 1 FALSE FALSE Rothia dentocariosa (SP194) 1.16060195118317 -4.63032213203124 1.38274577182935 2.64775657016977 0.839345868798214 -1.74877184111164 0.401275250543731 0.0803304660918315 1 1 FALSE FALSE Streptococcus mutans (SP196) 0.465801183798247 -2.08271931828653 1.00382165835286 1.9221721341199 0.464027827973512 -1.08352383291632 0.642627808259646 0.278575978135199 1 1 FALSE FALSE Veillonella parvula (SP23) -0.378794451045712 1.01413134280798 1.06735203265929 2.04382353917367 -0.354891769027648 0.496193200327853 0.722670675011955 0.619758107945633 1 1 FALSE FALSE Neisseria perflava (SP233) 0.57542583077836 -2.48467635721362 1.08481336432058 2.07725944371375 0.530437630752042 -1.19613193466652 0.595808541074361 0.231645077257618 1 1 FALSE FALSE Bifidobacterium longum (SP238) -0.65995133416047 2.04503991422876 0.774406207268474 1.48287499050722 -0.852203053082806 1.37910473055402 0.394101402404742 0.167862465537266 1 1 FALSE FALSE Veillonella dispar (SP24) -0.77158276271789 2.45435515227263 1.03580814934034 1.98342160122673 -0.744908951729408 1.23743492092384 0.456326763168863 0.215925661062458 1 1 FALSE FALSE Alloscardovia omnicolens (SP244) -0.597181273270729 1.81488302429971 0.946298139756257 1.81202298204407 -0.6310709576419 1.00157836974695 0.527994129568082 0.316547272130029 1 1 FALSE FALSE Bergeyella sp._HMT_322 (SP246) 0.713702892582756 -2.9916922504964 0.857331467094229 1.64166477385705 0.83247019382331 -1.82235271057653 0.405143595487414 0.0684014850355854 1 1 FALSE FALSE Streptococcus periodonticum (SP249) 0.545322180048237 -2.3742963045365 1.14017459987611 2.18326813899324 0.478279537280951 -1.08749642892299 0.632451258628283 0.276817475925673 1 1 FALSE FALSE Streptococcus infantis_clade_431 (SP251) -0.553292005647004 1.65395570967938 0.719684723925307 1.37809132744845 -0.768797762760944 1.20017859247522 0.442013377225644 0.230069987539171 1 1 FALSE FALSE Streptococcus intermedius (SP281) 0.232902077221143 -1.22875592750382 0.852236227037714 1.63190813195579 0.273283474501767 -0.752956556464487 0.784635317453032 0.45147602047451 1 1 FALSE FALSE Actinomyces naeslundii (SP297) 0.888663174917523 -3.63321328572388 0.981614813059135 1.87964926279597 0.905307421093275 -1.93292086860901 0.365302545994947 0.0532459466604428 1 1 FALSE FALSE Prevotella salivae (SP30) -1.2453279735209 4.191420925217 0.566720275071333 1.08518670773685 -2.19742971674015 3.86239611611001 0.0279897708899722 0.000112280315598854 1 0.00785962209191979 FALSE TRUE Schaalia sp._HMT_172 (SP32) -0.694059058770434 2.17010157113196 0.900773460531561 1.7248498581208 -0.770514551306672 1.25813940321522 0.440994726719356 0.208341345242409 1 1 FALSE FALSE Megasphaera micronuciformis (SP36) -1.32463612479178 4.48221747987688 0.518317914018099 0.992503242633293 -2.5556441113967 4.51607338630425 0.0105991461458956 6.29968404232639e-06 0.752539376358587 0.000447277567005174 FALSE TRUE Streptococcus peroris (SP367) 0.646670869038222 -2.74590816416644 0.967580631426148 1.85277585093478 0.668337963819173 -1.48205092525416 0.503917885147706 0.13832674521722 1 1 FALSE FALSE Veillonella atypica (SP37) -1.58525755346332 5.43782938500586 1.01094036064281 1.93580341120878 -1.56810195257743 2.8090814147343 0.116857340940739 0.00496830805835213 1 0.332876639909593 FALSE FALSE Selenomonas sp._HMT_136 (SP38) -0.493296117261729 1.43397078560005 0.570170163852291 1.09179274181211 -0.865173501764507 1.3134093410623 0.3869435669902 0.189045051577215 1 1 FALSE FALSE Schaalia sp._HMT_180 (SP4) 1.2982525621757 -5.13504103900386 1.35721393998169 2.59886683432652 0.95655704965218 -1.97587693650898 0.338790876252715 0.0481687169271987 1 1 FALSE FALSE Streptococcus sp._HMT_074 (SP40) -0.303346729405608 0.737489696794267 0.887653378286402 1.69972681332578 -0.34174007199884 0.433887193525677 0.732546512602251 0.664370359880937 1 1 FALSE FALSE Kingella oralis (SP408) 1.24431822432675 -4.93728180022437 1.06648496137285 2.04216322406568 1.16674708917131 -2.41767246713751 0.243312520192528 0.0156201297471005 1 0.984068174067333 FALSE FALSE Leptotrichia sp._HMT_215 (SP43) 0.502226131363681 -2.21627745935979 1.0276742040465 1.96784628179207 0.488701700778467 -1.12624521532316 0.625052899514803 0.260061739739104 1 1 FALSE FALSE Actinomyces graevenitzii (SP44) -0.429377672231568 1.19960315382279 0.914082180613044 1.75033411687191 -0.469736399350438 0.685356665484328 0.638543358885249 0.493118882293587 1 1 FALSE FALSE Schaalia lingnae_[Not_Validly_Published] (SP47) -1.18953357739607 3.9868414727593 0.780326667163767 1.4942118080955 -1.52440462110521 2.6681903135546 0.127407666450525 0.00762610468458994 1 0.495696804498346 FALSE FALSE Streptococcus sp._HMT_423 (SP48) 0.860523163504902 -3.5300332438776 1.48141298219188 2.83668989386533 0.580879993525965 -1.2444198611599 0.561321336955449 0.213345076916098 1 1 FALSE FALSE Schaalia odontolyticus (SP5) -1.06286476060321 3.52238914451882 0.970451471724559 1.85827309158225 -1.09522710982594 1.89551748904658 0.273417151617605 0.0580238769763281 1 1 FALSE FALSE Streptococcus sp._HMT_064 (SP50) 0.620864043519888 -2.65128313726588 1.11000923104147 2.12550585531774 0.559332324594601 -1.24736571796908 0.575934938584762 0.212263430719023 1 1 FALSE FALSE Oribacterium sinus (SP51) -1.03293117532188 3.41263266515392 0.497037846655001 0.951755015936673 -2.07817409131591 3.58562088774007 0.0376933274826351 0.000336277182802067 1 0.0232031256133426 FALSE TRUE Capnocytophaga gingivalis (SP54) 1.10872992073067 -4.44012468703877 0.942463470299915 1.8046801490705 1.17641686460044 -2.46033885246959 0.239428335814526 0.0138805891990024 1 0.888357708736156 FALSE FALSE Streptococcus sanguinis (SP6) 0.589595715817668 -2.53663260235775 1.40914192286737 2.69830135125823 0.418407618317066 -0.94008499131311 0.675649117469457 0.347173966754548 1 1 FALSE FALSE Lachnoanaerobaculum gingivalis (SP62) -0.426378320550162 1.18860553099096 0.662864565454708 1.26928900747493 -0.643235953120646 0.936434117045991 0.520071007519694 0.349049718949358 1 1 FALSE FALSE Lachnoanaerobaculum orale (SP64) -0.886840753703286 2.87696778588575 1.02633143968653 1.96527508379694 -0.8640880707836 1.46390080941107 0.387539511668557 0.143221052213371 1 1 FALSE FALSE Streptococcus parasanguinis_clade_411 (SP65) -0.558423328377498 1.6727705596912 1.27831385421615 2.44778467249405 -0.436843680083493 0.683381417690963 0.662224718735502 0.494365858921493 1 1 FALSE FALSE Stomatobaculum longum (SP68) -0.536552401129107 1.59257715978043 1.08797757765923 2.08331845096405 -0.493164943972 0.764442497518067 0.621896045618949 0.444603591550895 1 1 FALSE FALSE Fusobacterium nucleatum_subsp._animalis (SP74) 0.780917899644044 -3.23814727638779 1.17601985990791 2.25190658627129 0.664034619028623 -1.43795808233303 0.506668154104419 0.150445948025927 1 1 FALSE FALSE Streptococcus vestibularis (SP75) 0.105108462189593 -0.760179339054803 0.806734164535112 1.54477831575816 0.130288844591282 -0.49209607054959 0.896337905566145 0.622651429974191 1 1 FALSE FALSE Leptotrichia sp._HMT_221 (SP84) -0.0787154793054574 -0.0861582202396196 1.02468850840267 1.96212910990225 -0.0768189343980859 -0.0439105764268039 0.938767587775209 0.964975684664381 1 1 FALSE FALSE Veillonella rogosae (SP85) -0.021472661256749 -0.296048553084882 0.844416450100015 1.61693439912226 -0.0254289944898701 -0.183092494813388 0.979712784323112 0.854725444506838 1 1 FALSE FALSE Granulicatella adiacens (SP9) -0.18232940977996 0.293759524833561 0.779873515432913 1.4933440885934 -0.233793565458814 0.196712550762669 0.815145245180612 0.844052487910781 1 1 FALSE FALSE Moraxella osloensis (SP93) 0.908646460366288 -3.70648533236935 0.857934639243339 1.64281976058945 1.05910918944557 -2.2561728445727 0.28955005537069 0.024059808511291 1 1 FALSE FALSE Prevotella histicola (SP94) -1.52908054816361 5.23184703224027 0.90566622322486 1.73421878538957 -1.68834887395813 3.01683217614611 0.0913442784841747 0.00255431184971739 1 0.173693205780783 FALSE FALSE Capnocytophaga sputigena (SP95) 0.982112106686144 -3.97585936887549 0.906906781672963 1.73659427396351 1.08292508836956 -2.28945783622861 0.278841675005826 0.022052765031516 1 1 FALSE FALSE Streptococcus sanguinis_nov_97.782% (SPN76) 0.568982565105271 -2.46105104974562 1.04782367416923 2.00642957959694 0.543013656907866 -1.22658232054175 0.587120399460376 0.219979617432085 1 1 FALSE FALSE Streptococcus infantis_infantis_clade_638 (SPP1) 0.402975590531953 -1.85235880964346 1.15267698736503 2.20720838838038 0.349599753399379 -0.839231501382021 0.72663909602764 0.401339413248136 1 1 FALSE FALSE Veillonella denticariosi_dispar_parvula (SPP14) -1.16130492500484 3.88333641399144 0.929350051318034 1.77956986345326 -1.24958827231767 2.18217699329647 0.211449989408584 0.0290964725815224 1 1 FALSE FALSE Veillonella dispar_parvula (SPP15) -0.0857909879382601 -0.06021468858601 1.29481314727045 2.47937841335206 -0.0662574272736673 -0.0242862034539541 0.947172876820681 0.980624317935387 1 1 FALSE FALSE Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP16) 0.905197079342566 -3.69383760194904 0.998173550363455 1.91135683072672 0.906853401407967 -1.93257352189157 0.364484325978082 0.0532887568551166 1 1 FALSE FALSE Oribacterium asaccharolyticum_parvum (SPP3) 0.00808745155088619 -0.404435633379546 0.490254753395548 0.938766381214593 0.0164964265922396 -0.430816059748837 0.986838352867432 0.666602121338895 1 1 FALSE FALSE Streptococcus multispecies_sppn6_2_nov_97.976% (SPPN6) -0.0120675419387776 -0.330533990584112 1.15364916943969 2.20906997532428 -0.0104603221312409 -0.149625858065266 0.991654022671232 0.881059806055952 1 1 FALSE FALSE