Taxon F16728.S01 F16728.S09 F16728.S10 F16728.S16 F16728.S17 F16728.S19 F16728.S24 F5451.S01 F5451.S02 F5451.S17 F5451.S18 F5451.S19 F5451.S20 F8254.S01 F8254.S02 F8254.S03 F8254.S04 F8254.S07 F8254.S08 F8254.S17 F8254.S18 Megasphaera micronuciformis (SP1) 952 0 0 0 81 9 577 243 248 0 0 0 0 0 0 0 0 0 0 0 0 Haemophilus parainfluenzae (SP10) 388 21 54 7 16352 17223 24297 0 0 0 0 0 0 43 194 1066 191 212 619 32 37 Actinomyces oris (SP100) 0 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 538 317 0 0 Prevotella sp._HMT_309 (SP102) 13 0 0 0 0 0 0 96 117 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus oralis_subsp._tigurinus_clade_070 (SP106) 0 0 272 0 0 0 1404 0 0 0 0 237 654 40 0 0 0 0 0 347 1189 Lancefieldella parvula (SP109) 1459 34 11 566 40 111 2444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Selenomonas sp._HMT_136 (SP111) 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 88 54 Lachnoanaerobaculum orale (SP112) 777 0 0 16 130 0 1378 0 29 0 0 0 0 0 0 0 0 0 14 0 0 Porphyromonas pasteri (SP113) 2 0 0 0 2456 4335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus australis (SP115) 942 0 0 0 0 20020 0 0 0 0 0 0 0 0 0 0 0 23 167 0 0 Stomatobaculum longum (SP116) 625 0 0 35 43 0 991 0 5 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus infantis_clade_431 (SP118) 1343 0 0 0 327 1533 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 Catonella morbi (SP119) 17 0 0 0 0 25 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 Campylobacter concisus (SP13) 167 0 7 0 122 83 1357 47 82 0 10 0 0 0 0 0 0 0 0 0 0 Streptococcus sp._HMT_064 (SP131) 0 161 0 0 4041 0 0 26 15 0 43 0 0 0 0 1054 921 0 0 0 0 Streptococcus sp._HMT_423 (SP136) 8 22092 0 0 0 77 185 5 9 0 476 0 0 721 218 409 128 1659 109 292 1954 Streptococcus oralis (SP137) 154 0 422 0 0 36 0 265 309 0 0 0 0 0 0 0 0 306 0 0 0 Streptococcus salivarius (SP14) 25148 28464 61814 27783 5467 4144 45346 0 0 134 0 8445 4784 621 2477 0 300 0 20 0 0 Prevotella nanceiensis (SP141) 3 0 0 0 0 563 1204 89 46 0 0 0 0 0 0 0 0 0 0 0 0 Lachnoanaerobaculum gingivalis (SP151) 0 0 0 0 164 119 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Microbacterium hydrothermale (SP152) 0 0 0 0 0 0 0 0 0 0 0 0 59 0 0 708 1707 0 0 0 0 Leptotrichia sp._HMT_215 (SP153) 0 0 0 0 88 148 845 377 458 0 0 0 0 0 0 0 0 0 0 0 111 Streptococcus mitis (SP161) 2300 11512 1258 0 5214 19619 11256 28 7 12 20 265 127 0 0 720 477 4762 11134 47 1070 Fusobacterium nucleatum_subsp._animalis (SP164) 82 0 0 0 0 0 0 2583 3065 0 0 0 0 0 0 0 0 0 0 0 0 Actinomyces graevenitzii (SP17) 2509 1800 0 0 701 0 18 0 0 139 85 0 0 0 0 0 0 0 0 0 0 Streptococcus sanguinis (SP179) 0 6607 0 262 349 77 1147 0 0 0 298 0 0 2112 5866 1788 319 437 1020 100 75 Streptococcus periodonticum (SP18) 5864 0 358 0 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 Alloprevotella sp._HMT_308 (SP182) 0 7 0 0 61 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus gordonii (SP195) 512 0 0 0 0 101 710 3432 4411 0 0 0 0 0 0 138 0 2667 113 341 125 Prevotella histicola (SP2) 870 175 26 38 480 89 0 0 0 373 132 0 0 0 0 0 0 0 0 0 0 Streptococcus downii (SP20) 0 0 0 0 1908 889 0 0 0 0 0 0 0 0 0 159 63 0 11 0 0 Agrobacterium tumefaciens (SP203) 0 0 0 0 0 0 0 0 0 0 35 443 114 0 0 230 544 0 0 0 0 Streptococcus sp._HMT_066 (SP206) 5597 0 0 0 0 6972 685 17 0 0 0 0 0 0 0 0 0 3 67 0 0 Leptotrichia sp._HMT_212 (SP208) 0 0 7 0 1068 0 0 0 0 0 0 0 0 0 0 0 0 81 141 0 0 Granulicatella adiacens (SP21) 5756 1017 2726 362 11195 3888 7158 536 436 0 530 0 0 135 252 0 0 141 358 343 513 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP211) 0 0 0 19 0 0 0 0 0 0 0 0 0 610 17 0 0 0 0 0 0 Fusobacterium sp._HMT_204 (SP214) 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 1383 621 Capnocytophaga granulosa (SP22) 0 0 0 0 70 0 0 0 0 0 0 0 0 183 351 0 0 7 13 0 0 Actinomyces sp._HMT_170 (SP225) 195 14658 0 0 0 0 0 1381 1201 41 232 0 0 0 0 0 0 0 0 0 0 Micrococcus flavus (SP232) 0 0 0 0 0 0 0 0 0 34 0 633 481 0 0 0 0 0 0 0 0 Cardiobacterium hominis (SP237) 0 0 0 5 0 3 0 0 0 0 0 0 0 222 603 0 0 34 35 0 0 Schaalia odontolyticus (SP24) 8265 757 15 89 3472 77 3140 0 0 0 1367 0 0 0 0 0 64 0 0 0 0 Novosphingobium silvae (SP247) 0 0 0 0 0 0 0 0 0 61 90 1156 277 0 0 0 0 0 0 0 0 Neisseria flava (SP25) 0 8 0 0 0 98 0 0 0 0 750 0 0 0 0 0 0 59 770 0 0 Rothia dentocariosa (SP258) 111 3528 0 22 0 10 991 143 551 1018 346 0 0 623 537 0 0 0 0 0 51 Schaalia sp._HMT_180 (SP26) 652 0 0 48 13 0 0 0 0 0 0 0 0 5411 564 0 0 0 0 0 0 Streptococcus parasanguinis_clade_411 (SP28) 30839 2514 22644 4390 8680 219 9265 96 0 77 0 595 618 219 268 0 0 0 0 0 0 Campylobacter gracilis (SP282) 36 3 0 0 0 0 8 341 1205 0 80 0 0 59 0 0 0 0 0 94 835 Prevotella pallens (SP29) 94 0 0 0 0 5 0 260 300 0 0 0 0 0 0 0 0 0 0 0 0 Rothia aeria (SP296) 0 0 0 69 0 23 0 0 0 0 0 0 0 2961 2934 0 0 43 41 0 0 Neisseria mucosa (SP299) 0 0 0 56 0 0 0 0 0 0 975 0 0 1381 1413 0 0 0 0 0 0 Streptococcus sp._HMT_074 (SP302) 65 0 67 0 10377 0 2023 0 0 0 0 0 0 0 0 33 0 0 0 0 0 Cutibacterium acnes (SP314) 0 9 3 0 118 3 31 0 0 0 0 36 40 0 0 0 12 0 0 0 0 Bifidobacterium longum (SP328) 587 0 0 0 24 0 92 0 24 0 0 0 0 0 0 0 0 0 0 0 0 Lautropia mirabilis (SP332) 0 0 0 0 0 65 0 0 0 0 0 0 0 105 1105 0 0 246 1171 0 0 Bifidobacterium scardovii (SP353) 0 1296 0 0 0 0 0 0 0 2029 36 0 0 0 0 0 0 0 0 0 0 Gemella haemolysans (SP37) 223 2895 24 0 7651 2647 698 6 0 0 0 0 0 0 0 878 240 837 1855 0 26 Bergeyella sp._HMT_322 (SP40) 0 14 0 0 439 1565 176 0 0 0 37 0 0 0 11 0 0 121 328 0 32 Campylobacter showae (SP41) 0 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 29 60 403 101 Streptococcus intermedius (SP416) 101 0 0 0 0 0 0 1432 2232 0 0 0 0 0 0 0 0 216 197 0 0 Schaalia lingnae_[Not_Validly_Published] (SP43) 3205 1689 14 203 110 19 1276 0 0 1329 133 0 0 0 0 0 0 0 0 0 0 Kingella oralis (SP439) 0 12 0 36 0 0 0 0 0 19 195 0 0 232 99 0 0 0 0 0 0 Prevotella salivae (SP46) 1573 0 0 0 0 22 728 180 135 50 0 0 0 0 0 0 0 0 0 4 0 Haemophilus parahaemolyticus (SP47) 0 0 0 0 4153 616 0 0 0 0 0 0 0 0 0 868 86 357 1304 0 0 Capnocytophaga gingivalis (SP48) 0 4 0 24 766 60 183 0 0 0 209 0 0 389 1071 0 26 0 80 3629 2911 Gemella sanguinis (SP49) 189 57 1438 0 7374 3481 2305 24 0 0 0 0 6 0 0 0 85 0 0 0 0 Veillonella atypica (SP5) 2180 443 292 681 769 217 3888 0 43 131 0 0 0 214 0 0 0 0 0 0 0 Rothia mucilaginosa (SP50) 39261 48407 69728 4312 76414 44103 45682 0 0 0 0 1575 954 39 107 10249 1761 0 439 0 0 Schaalia odontolytica (SP51) 3215 15 0 0 0 0 200 860 894 0 0 0 0 0 132 0 0 0 0 1115 118 Mogibacterium diversum (SP52) 620 0 0 0 0 52 636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Moraxella osloensis (SP53) 0 0 0 0 0 0 0 34 0 78 126 2398 1471 6 0 5954 25919 0 0 6 18 Actinomyces sp._HMT_169 (SP60) 0 0 0 0 49 0 2309 0 0 0 0 0 64 327 145 256 31 0 0 3286 7632 Fusobacterium periodonticum (SP64) 160 0 0 0 2178 1473 2270 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia wadei (SP68) 26 0 0 62 0 0 0 445 685 0 0 0 0 3155 79 0 0 0 0 0 0 Solobacterium moorei (SP69) 397 5 0 0 0 62 325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actinomyces naeslundii (SP71) 0 0 0 8 0 0 0 0 0 0 0 0 0 391 1392 0 0 0 14 0 0 Fusobacterium nucleatum (SP72) 26 41 0 24 973 11 34 411 633 0 322 0 0 757 2081 0 0 309 612 5092 2057 Capnocytophaga sputigena (SP78) 0 0 0 17 295 5 0 0 0 0 0 0 0 253 1033 0 0 13 49 0 0 Capnocytophaga leadbetteri (SP8) 0 0 0 0 0 50 15 0 0 0 0 0 0 0 0 0 0 0 59 2098 166 Acinetobacter lwoffii (SP81) 0 0 0 0 0 0 0 0 9 0 0 0 134 13 0 20 0 0 0 0 24 Veillonella rogosae (SP9) 254 0 0 0 0 9711 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 Leptotrichia hongkongensis (SP90) 0 59 0 29 0 0 345 0 0 9 388 0 0 269 1271 0 0 0 0 184 1209 Abiotrophia defectiva (SP91) 0 0 0 0 143 0 0 0 0 0 0 0 0 0 0 1774 249 0 0 0 0 Veillonella parvula (SP92) 3871 95 115 774 0 0 1153 1223 1413 95 1322 306 703 227 56 0 0 0 0 148 278 Veillonella dispar (SP93) 1921 104 0 954 967 0 2431 1103 1283 0 0 0 0 4 0 0 0 0 0 0 0 Eikenella corrodens (SP95) 0 0 0 17 0 8 7 0 0 0 0 0 0 447 310 0 0 0 14 1078 254 Neisseria perflava (SP97) 0 0 0 0 0 7249 18167 0 0 0 0 0 0 0 0 0 0 0 54 0 0 Acinetobacter johnsonii (SP98) 0 0 0 0 0 0 0 0 0 0 65 1142 606 0 7 14 453 0 13 0 0 Prevotella melaninogenica (SP99) 4354 12 0 22 331 651 15636 0 0 0 0 0 0 9 0 0 0 5 0 0 0 Actinomyces sp._HMT_175_nov_97.551% (SPN195) 467 0 0 0 0 0 1164 3735 2980 0 0 0 0 0 0 0 0 0 0 1539 3493 Reyranella massiliensis_soli (SPP12) 104 0 8 24 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Veillonella denticariosi_dispar_parvula (SPP13) 2344 62 0 1430 527 0 680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Afipia birgiae_broomeae (SPP14) 1208 23 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus infantis_infantis_clade_638 (SPP21) 0 9 1786 0 24959 3457 1906 0 0 515 0 41 7 0 0 300 480 0 21 0 0 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP32) 8111 0 2108 0 744 392 1797 0 0 0 0 330 0 0 0 0 0 0 0 0 0 Veillonella dispar_parvula (SPP37) 540 730 0 0 23 0 5555 2487 2744 3075 5131 377 366 866 343 0 0 124 0 418 804 Streptococcus sp._HMT_061_sp._HMT_066 (SPP4) 57 0 0 0 10561 8 653 0 0 0 0 0 0 0 0 17 371 0 0 0 0 Staphylococcus capitis_epidermidis (SPP7) 4 4 0 0 58 10 34 0 0 0 0 0 0 0 0 0 93 0 0 0 0 Streptococcus multispecies_sppn5_2_nov_97.976% (SPPN5) 4599 0 3776 0 3482 0 943 0 0 0 0 203 36 0 0 0 0 0 0 0 7