Taxon F16728.S02 F16728.S04 F16728.S05 F16728.S07 F16728.S08 F16728.S12 F16728.S13 F16728.S21 F16728.S22 F16728.S25 F5451.S03 F5451.S04 F5451.S07 F5451.S08 F5451.S09 F5451.S10 F5451.S13 F5451.S14 F5451.S15 F5451.S16 F5451.S23 F5451.S24 F5451.S25 F5451.S26 F8254.S11 F8254.S12 F8254.S13 F8254.S14 F8254.S19 F8254.S20 Megasphaera micronuciformis (SP1) 63 999 135 0 830 1082 173 2517 37 661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 Haemophilus parainfluenzae (SP10) 4622 187 3503 65 1114 290 3930 2668 1591 12 58 0 1352 885 0 80 0 0 0 127 0 0 180 149 3448 490 0 0 0 836 Actinomyces oris (SP100) 559 0 83 0 0 0 0 0 0 0 0 138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Prevotella jejuni (SP104) 0 482 24 0 0 0 0 0 0 132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 Streptococcus oralis_subsp._tigurinus_clade_070 (SP106) 0 0 145 0 0 0 0 0 1434 0 0 0 0 0 10 35 0 0 0 0 0 0 0 0 0 0 3203 2221 0 0 Lancefieldella parvula (SP109) 425 1146 1395 2799 4444 3199 373 2491 653 3117 29 202 0 0 0 0 0 4 717 86 19 0 0 0 0 0 166 870 0 0 Parascardovia denticolens (SP110) 0 0 23 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7254 16192 61 20 0 0 0 0 0 0 Lachnoanaerobaculum orale (SP112) 573 118 329 8170 655 246 130 0 0 187 0 0 0 0 0 0 0 0 0 2185 0 0 0 0 0 0 0 0 0 0 Porphyromonas pasteri (SP113) 0 34 1241 0 0 0 178 415 274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 277 0 0 0 0 Actinomyces sp._HMT_175 (SP114) 109 0 0 0 0 0 0 0 0 13 0 345 232 162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18172 6740 Streptococcus australis (SP115) 8 0 75 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 26 0 0 0 0 0 Stomatobaculum longum (SP116) 44 366 931 0 1434 573 0 0 601 297 0 0 0 0 0 0 0 0 134 1571 73 60 0 0 0 0 9 670 0 0 Streptococcus infantis_clade_431 (SP118) 219 21 73 2934 176 0 495 0 36 69 0 0 0 0 0 0 55 1683 0 0 0 0 0 0 0 0 0 0 0 0 Catonella morbi (SP119) 6 0 183 0 0 19 131 47 0 0 0 0 0 0 717 582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus anginosus (SP12) 0 0 77 0 0 0 0 0 18 0 0 0 0 0 225 1258 0 0 0 0 0 0 122 0 0 0 0 89 0 0 Prevotella oris (SP125) 0 0 125 0 9 0 5 0 15 0 0 0 0 0 268 704 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Campylobacter concisus (SP13) 196 318 350 0 359 15 777 529 219 89 60 71 0 0 0 31 0 0 34 13 0 6 74 9 9 11 0 0 0 0 Streptococcus sp._HMT_064 (SP131) 79 24 0 0 0 11 12023 0 0 0 0 0 14958 8403 0 0 0 0 0 0 0 0 338 82 0 0 0 0 0 0 Streptococcus sp._HMT_423 (SP136) 29 0 0 0 0 0 71 336 388 0 105 268 157 270 0 0 0 0 0 0 0 0 0 0 605 776 103 0 0 370 Streptococcus oralis (SP137) 2883 452 58 5 11 1121 29719 75 541 0 3973 3966 2626 1801 0 0 0 0 0 0 0 0 840 225 187 185 201 0 0 0 Streptococcus salivarius (SP14) 98872 13201 11900 0 46562 32002 45423 41011 34615 59962 585 348 0 902 0 72 0 0 1036 0 74 0 4795 596 156 78 0 53 129 30 Prevotella nanceiensis (SP141) 0 36 519 0 0 0 22 285 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 10 26 0 0 0 0 Lactobacillus acidophilus (SP142) 0 0 0 0 0 17 0 0 0 15930 0 0 0 0 0 0 0 0 0 0 37 0 0 0 0 0 0 0 0 0 Lachnoanaerobaculum gingivalis (SP151) 0 0 0 0 128 129 71 289 0 51 0 0 0 0 0 0 0 0 0 415 0 0 0 0 18 88 0 0 0 0 Leptotrichia sp._HMT_215 (SP153) 0 136 464 0 0 22 157 162 6 0 0 0 84 33 0 0 0 0 0 0 0 0 0 0 44 80 0 0 0 0 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP160) 7 286 1288 2162 187 616 214 404 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 27 0 33 0 0 Streptococcus mitis (SP161) 4447 639 5095 2563 0 1368 1045 48 23130 0 2074 2479 1399 4477 251 884 4626 8646 0 0 0 0 14 21 0 0 40 32 19 0 Actinomyces graevenitzii (SP17) 1075 388 5462 5713 12287 3533 1466 8192 414 5915 329 120 0 0 24 0 1013 0 44 0 0 0 0 0 0 0 0 0 0 0 Actinomyces israelii (SP175) 0 0 52 0 0 0 0 0 0 0 0 0 0 0 666 222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Treponema socranskii (SP178) 0 0 5 0 0 0 0 0 0 0 0 0 0 0 457 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus sanguinis (SP179) 0 0 0 0 0 0 0 59 4618 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8171 6117 0 0 919 3992 Streptococcus periodonticum (SP18) 0 207 2008 0 0 3453 14 0 658 0 0 0 0 115 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Alloprevotella sp._HMT_308 (SP182) 0 0 161 6 0 13 0 799 102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 0 0 0 0 Leptotrichia sp._HMT_221 (SP19) 0 0 115 0 0 668 817 0 268 1078 0 0 0 0 0 0 0 0 0 0 42 14 28 30 0 0 0 0 0 0 Selenomonas sp._HMT_137 (SP191) 15 0 13 0 0 0 0 0 0 0 0 39 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 347 0 Streptococcus gordonii (SP195) 1741 0 330 0 0 0 8613 0 8033 24 4877 3936 889 404 0 267 0 0 0 0 0 0 911 2912 0 0 1361 123 397 4317 Prevotella histicola (SP2) 0 9237 1569 0 5319 13930 5003 31862 1752 3807 0 0 0 0 0 0 0 0 767 367 11 0 0 66 0 0 0 172 0 14 Streptococcus downii (SP20) 0 17 9 0 0 0 62 31 77 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus oralis_subsp._tigurinus_clade_071 (SP202) 0 0 195 0 0 0 0 0 0 18 0 0 0 0 21 325 0 0 0 0 0 0 0 0 0 0 0 0 891 334 Streptococcus sp._HMT_066 (SP206) 4986 0 255 1780 0 418 149 0 0 0 310 62 0 0 0 0 23 44 0 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp._HMT_212 (SP208) 0 0 177 0 0 0 0 0 21 0 0 0 0 0 47 531 0 0 0 0 0 0 0 0 0 0 0 510 0 0 Granulicatella adiacens (SP21) 1136 709 7851 5707 682 3268 1528 4004 4855 869 0 5 552 351 14 144 463 0 74 27 13 0 92 112 445 641 231 584 0 0 Fusobacterium sp._HMT_204 (SP214) 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 189 84 0 Lactobacillus crispatus (SP215) 0 0 0 0 2788 0 0 0 0 0 0 0 0 0 0 0 0 0 89 239 0 0 0 0 0 0 0 0 0 0 Parvimonas micra (SP217) 0 0 29 0 0 0 0 0 28 0 0 0 0 0 3311 3930 0 0 0 54 0 0 0 0 0 0 0 0 0 0 Capnocytophaga granulosa (SP22) 0 0 8 0 0 0 0 0 0 0 0 0 29 20 0 73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actinomyces sp._HMT_170 (SP225) 0 0 9 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 266 1398 0 0 0 0 0 0 Cardiobacterium hominis (SP237) 0 0 6 0 0 0 0 0 10 0 0 0 0 0 0 207 0 0 0 0 0 0 0 0 0 0 0 0 0 316 Streptococcus vestibularis (SP239) 0 0 233 0 63 1177 252 53 1419 172 0 0 0 0 0 0 0 0 1699 0 19 0 0 0 0 0 0 0 0 0 Schaalia odontolyticus (SP24) 482 133 2739 14748 8787 721 665 6918 2910 2805 0 0 0 0 0 0 791 99 70 597 0 35 0 0 0 0 760 47 19 0 Neisseria flava (SP25) 0 0 0 0 0 0 0 9 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1121 486 0 0 0 2801 Arachnia propionica (SP254) 0 0 472 0 0 0 0 0 0 0 0 0 0 0 993 5132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Rothia dentocariosa (SP258) 9 0 337 0 0 0 20911 12 10827 13 0 0 0 0 0 0 0 0 0 0 0 0 5417 6719 18 132 38 41 0 254 Schaalia sp._HMT_180 (SP26) 0 666 59 0 0 1658 61 0 107 0 0 0 0 0 0 120 0 0 0 0 1005 3025 221 0 0 0 187 831 0 0 Prevotella sp._HMT_317 (SP262) 0 0 6 0 0 0 0 0 0 0 0 0 0 0 612 539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Selenomonas artemidis (SP266) 0 0 6 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 381 0 Streptococcus parasanguinis_clade_411 (SP28) 7858 1866 4996 41946 19697 9827 5391 12529 17429 12450 337 253 0 523 0 9 1107 1218 283 116 222 212 173 179 0 0 1137 597 0 0 Campylobacter gracilis (SP282) 0 0 0 0 0 0 0 0 30 0 0 0 0 0 462 632 0 0 0 0 0 0 0 0 0 0 9 437 0 0 Porphyromonas endodontalis (SP289) 0 0 295 0 4 0 0 0 0 0 0 0 0 0 0 4372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Prevotella pallens (SP29) 0 41 627 0 0 0 166 119 0 0 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Neisseria mucosa (SP299) 0 0 213 0 0 0 0 0 7970 0 0 0 0 0 204 349 0 0 0 0 0 0 0 0 0 0 325 62 0 0 Streptococcus sp._HMT_074 (SP302) 0 0 1331 0 0 839 0 1857 15 0 0 0 0 0 10 7 0 0 0 0 0 0 0 0 35 14 0 0 0 0 Cutibacterium acnes (SP314) 97 3 6 0 0 0 19 0 8 4 0 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 Bifidobacterium longum (SP328) 226 202 220 0 15000 873 0 251 59 6379 50 66 0 0 0 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 Lautropia mirabilis (SP332) 0 0 81 0 0 0 0 17 107 0 0 0 0 0 0 257 0 0 0 0 0 0 0 0 4923 5028 0 0 0 0 Peptostreptococcus stomatis (SP34) 0 0 1310 0 0 0 192 0 0 0 0 0 0 0 101 341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Schaalia meyeri (SP359) 0 291 292 262 0 194 0 0 0 0 0 0 0 0 0 0 559 118 0 0 0 0 0 0 0 0 0 0 0 0 Gemella haemolysans (SP37) 0 38 5600 196 100 100 330 69 1951 31 0 0 131 480 222 450 21 11 0 0 0 0 0 0 0 0 0 0 0 29 Filifactor alocis (SP372) 0 0 152 0 0 0 0 0 0 0 0 0 0 0 829 656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Schaalia sp._HMT_172 (SP38) 0 2319 7876 0 5 1916 10130 0 0 0 0 0 0 63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Cryptobacterium curtum (SP392) 0 20 0 0 37 6 0 0 2 110 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 581 0 Bergeyella sp._HMT_322 (SP40) 0 49 76 47 25 11 79 71 26 0 0 0 59 145 0 66 102 209 27 28 0 0 14 0 8 14 15 8 0 22 Campylobacter showae (SP41) 0 0 11 0 0 0 0 0 0 0 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 204 0 Streptococcus intermedius (SP416) 71 0 0 0 0 0 0 0 0 0 101 2009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp._HMT_417 (SP42) 0 3138 64 0 7 938 1538 0 0 291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 Schaalia lingnae_[Not_Validly_Published] (SP43) 37 89 1817 2833 685 877 214 1156 786 734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 500 140 0 0 Kingella oralis (SP439) 0 0 20 0 0 0 202 0 112 0 0 0 140 19 0 0 0 0 0 0 0 0 70 0 0 0 0 19 0 0 Prevotella salivae (SP46) 24 207 391 0 1416 1090 23 434 170 194 0 0 0 0 0 0 0 0 20 70 0 0 0 0 0 20 0 166 41 0 Haemophilus parahaemolyticus (SP47) 0 0 1053 0 0 0 20 0 0 0 0 0 0 0 160 355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Capnocytophaga gingivalis (SP48) 0 0 38 0 0 0 18 0 112 0 0 17 33 0 0 223 0 0 0 0 0 0 0 82 0 0 19 45 0 0 Gemella sanguinis (SP49) 166 69 3428 1017 391 955 479 2027 2823 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 10 77 0 46 0 0 Veillonella atypica (SP5) 374 3790 2408 1662 5322 7020 3101 5147 1613 7190 0 0 0 0 0 0 3475 30 304 334 156 87 97 0 0 0 0 0 0 0 Rothia mucilaginosa (SP50) 21800 1658 36171 82471 9775 16894 8910 18016 20547 13720 55 104 0 213 0 789 2939 8114 584 0 9 0 105 251 531 121 0 13 0 0 Schaalia odontolytica (SP51) 542 0 2307 1796 6 328 205 343 1157 0 4228 3966 0 0 0 61 0 0 0 0 0 0 0 196 6682 8465 466 421 0 0 Mogibacterium diversum (SP52) 53 69 1089 119 0 377 302 803 67 0 0 19 0 0 0 23 0 0 0 0 0 0 0 0 0 0 16 162 0 0 Actinomyces sp._HMT_169 (SP60) 0 0 0 0 0 0 314 0 1988 0 0 0 386 324 0 0 0 0 0 0 0 0 854 213 0 0 410 1790 0 0 Actinomyces sp._HMT_171 (SP63) 0 0 29 0 0 0 0 0 1007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 825 243 0 0 Fusobacterium periodonticum (SP64) 0 99 2085 0 770 53 968 2261 117 0 0 0 0 0 0 0 0 0 165 1470 0 0 51 0 0 117 0 0 0 0 Solobacterium moorei (SP69) 23 108 967 0 0 484 65 894 145 55 0 0 0 0 0 1397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Ligilactobacillus salivarius (SP7) 125 0 0 0 4511 97 0 0 39 3286 0 0 0 0 0 0 0 0 322 476 269 62 0 0 0 0 0 0 0 0 Oribacterium sinus (SP70) 646 484 3140 1602 193 183 1232 552 395 6 0 0 0 0 0 0 0 0 0 0 0 0 13 29 0 0 0 0 0 0 Fusobacterium nucleatum (SP72) 0 0 152 0 0 0 0 11 112 8 0 0 0 0 16515 8329 0 0 0 0 230 175 0 0 477 954 12 310 3053 807 Streptococcus chosunense (SP74) 0 0 13873 0 0 0 2215 0 0 0 0 0 0 0 23 318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Capnocytophaga sputigena (SP78) 0 0 0 0 0 0 0 10 374 0 0 0 0 0 0 0 0 0 0 0 146 159 0 0 68 759 0 0 21 230 Leptotrichia hongkongensis (SP90) 0 0 0 0 0 0 0 0 1603 0 0 0 0 0 0 0 0 0 0 0 0 0 18 75 0 0 34 0 0 0 Abiotrophia defectiva (SP91) 0 0 146 0 0 0 0 145 2282 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1407 285 745 38 276 5203 Veillonella parvula (SP92) 5494 98 594 5395 219 0 688 165 836 36 847 898 565 0 19 81 208 0 0 0 0 0 171 298 0 16 2457 901 183 427 Veillonella dispar (SP93) 4289 470 531 3910 19 2232 1407 3272 1112 134 0 0 0 0 0 0 0 0 0 0 0 0 101 17 0 0 0 0 188 367 Eikenella corrodens (SP95) 0 0 18 0 0 0 0 8 17 0 0 0 105 0 0 235 0 0 0 0 0 0 0 0 0 83 0 58 181 8 Neisseria perflava (SP97) 0 0 2506 0 0 0 0 5299 1159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 36 0 0 0 0 Prevotella melaninogenica (SP99) 674 243 9385 2072 0 4105 630 2600 1414 10 0 0 0 0 0 0 0 0 0 0 0 0 54 0 61 0 805 4157 443 145 Selenomonas sp._HMT_137_nov_97.228% (SPN75) 32 0 0 0 0 0 0 0 0 0 0 105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 920 0 Veillonella denticariosi_dispar_parvula (SPP13) 2633 822 2856 3342 1430 1117 1544 766 1401 430 0 0 0 119 0 9 117 0 0 97 0 0 72 106 0 0 0 0 0 0 Streptococcus infantis_infantis_clade_431_infantis_clade_638 (SPP2) 0 0 74 0 34 0 0 0 0 65 0 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 Streptococcus infantis_infantis_clade_638 (SPP21) 1139 46 749 1918 2610 103 419 1358 3524 30 0 0 0 23 0 33 3076 84 93 0 0 0 27 11 16 9 102 18 0 5 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP32) 1163 454 1677 4371 1805 3962 351 3727 1071 0 0 0 0 0 0 0 474 423 0 0 0 0 0 0 0 0 0 0 0 0 Veillonella dispar_parvula (SPP37) 6084 953 2229 1045 3029 652 2127 8818 1247 97 2625 2190 2173 363 0 0 0 0 143 590 307 1178 354 427 257 457 7543 4767 386 778 Lachnoanaerobaculum gingivalis_umeaense (SPP6) 7 0 12 0 0 0 0 474 36 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 50 75 0 30 0 0 Staphylococcus capitis_epidermidis (SPP7) 81 0 18 8 0 0 11 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 Peptostreptococcaceae_[XI][G-4] bacterium_HMT_103_bacterium_HMT_369 (SPP8) 0 0 15 0 0 0 0 0 0 0 0 0 0 0 217 371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus multispecies_sppn5_2_nov_97.976% (SPPN5) 0 0 1974 0 0 2572 436 516 1058 0 0 0 0 0 0 93 0 0 0 0 0 0 12 19 0 0 0 0 0 0