Taxon F16728.S01 F16728.S02 F16728.S03 F16728.S04 F16728.S05 F16728.S06 F16728.S07 F16728.S08 F16728.S09 F16728.S10 F16728.S11 F16728.S12 F16728.S13 F16728.S14 F16728.S15 F16728.S16 F16728.S17 F16728.S18 F16728.S19 F16728.S20 F16728.S21 F16728.S22 F16728.S23 F16728.S24 F16728.S25 Megasphaera micronuciformis (SP1) 952 63 132 999 135 56 0 830 0 0 769 1082 173 4951 0 0 81 0 9 0 2517 37 0 577 661 Haemophilus parainfluenzae (SP10) 388 4622 0 187 3503 33461 65 1114 21 54 0 290 3930 0 359 7 16352 0 17223 2861 2668 1591 0 24297 12 Actinomyces oris (SP100) 0 559 0 0 83 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 0 0 Prevotella sp._HMT_309 (SP102) 13 0 86 0 0 0 0 0 0 0 0 162 0 0 0 0 0 0 0 0 0 0 0 0 0 Prevotella jejuni (SP104) 209 0 0 482 24 35 0 0 0 0 228 0 0 0 0 0 0 0 80 0 0 0 0 0 132 Streptococcus oralis_subsp._tigurinus_clade_070 (SP106) 0 0 0 0 145 0 0 0 0 272 0 0 0 0 0 0 0 70 0 25 0 1434 0 1404 0 Stomatobaculum sp._HMT_097 (SP107) 0 35 0 127 432 12 0 0 0 0 0 292 392 0 0 0 0 0 387 0 0 0 0 0 0 Lancefieldella parvula (SP109) 1459 425 1505 1146 1395 345 2799 4444 34 11 1523 3199 373 8540 52 566 40 2152 111 795 2491 653 127 2444 3117 Parascardovia denticolens (SP110) 0 0 0 0 23 0 0 0 0 0 12 30 0 0 19 0 0 0 0 0 0 0 0 0 0 Selenomonas sp._HMT_136 (SP111) 0 0 86 17 13 115 0 0 0 0 208 12 36 3 0 0 0 0 0 0 13 0 0 9 0 Lachnoanaerobaculum orale (SP112) 777 573 791 118 329 79 8170 655 0 0 361 246 130 1399 0 16 130 133 0 0 0 0 0 1378 187 Porphyromonas pasteri (SP113) 2 0 0 34 1241 25 0 0 0 0 0 0 178 0 0 0 2456 0 4335 0 415 274 0 0 0 Streptococcus australis (SP115) 942 8 0 0 75 655 0 0 0 0 0 0 0 0 0 0 0 0 20020 0 25 0 0 0 0 Stomatobaculum longum (SP116) 625 44 393 366 931 0 0 1434 0 0 621 573 0 1091 0 35 43 0 0 1305 0 601 12 991 297 Streptococcus infantis_clade_431 (SP118) 1343 219 0 21 73 4781 2934 176 0 0 309 0 495 336 0 0 327 0 1533 622 0 36 171 0 69 Catonella morbi (SP119) 17 6 0 0 183 59 0 0 0 0 11 19 131 0 0 0 0 0 25 0 47 0 0 0 0 Streptococcus anginosus (SP12) 0 0 0 0 77 0 0 0 11604 0 0 0 0 0 440 0 0 91 0 0 0 18 11 0 0 Prevotella oris (SP125) 0 0 0 0 125 0 0 9 0 0 4 0 5 0 430 0 0 0 0 0 0 15 0 0 0 Campylobacter concisus (SP13) 167 196 295 318 350 261 0 359 0 7 234 15 777 269 0 0 122 810 83 490 529 219 0 1357 89 Streptococcus sp._HMT_057 (SP130) 0 0 0 707 858 316 0 744 0 0 0 2202 329 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus sp._HMT_064 (SP131) 0 79 0 24 0 5497 0 0 161 0 31 11 12023 0 325 0 4041 0 0 0 0 0 0 0 0 Streptococcus sp._HMT_423 (SP136) 8 29 50 0 0 0 0 0 22092 0 49 0 71 0 1249 0 0 0 77 12 336 388 0 185 0 Streptococcus oralis (SP137) 154 2883 0 452 58 836 5 11 0 422 0 1121 29719 0 0 0 0 0 36 31 75 541 0 0 0 Streptococcus salivarius (SP14) 25148 98872 100033 13201 11900 23498 0 46562 28464 61814 53546 32002 45423 49967 78629 27783 5467 69521 4144 9737 41011 34615 38050 45346 59962 Prevotella nanceiensis (SP141) 3 0 0 36 519 60 0 0 0 0 0 0 22 0 0 0 0 0 563 384 285 0 0 1204 0 Lactobacillus acidophilus (SP142) 0 0 0 0 0 0 0 0 0 0 0 17 0 0 8 0 0 0 0 0 0 0 0 0 15930 Lachnospiraceae_[G-2] bacterium_HMT_096 (SP144) 0 0 0 0 0 67 0 0 0 0 407 518 0 0 0 0 0 0 0 0 0 0 0 0 0 Lachnoanaerobaculum gingivalis (SP151) 0 0 168 0 0 321 0 128 0 0 153 129 71 0 0 0 164 0 119 0 289 0 0 60 51 Leptotrichia sp._HMT_215 (SP153) 0 0 0 136 464 1026 0 0 0 0 0 22 157 61 0 0 88 0 148 0 162 6 0 845 0 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP160) 158 7 0 286 1288 98 2162 187 0 0 0 616 214 199 0 0 0 0 43 0 404 26 0 0 0 Streptococcus mitis (SP161) 2300 4447 1701 639 5095 311 2563 0 11512 1258 59 1368 1045 901 0 0 5214 224 19619 286 48 23130 1429 11256 0 Fusobacterium nucleatum_subsp._animalis (SP164) 82 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0 0 0 0 0 0 3 0 0 Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP166) 89 7 222 102 27 0 0 0 0 0 0 89 86 13 0 0 0 0 32 0 0 0 0 0 0 Actinomyces graevenitzii (SP17) 2509 1075 8 388 5462 273 5713 12287 1800 0 6 3533 1466 3883 0 0 701 0 0 0 8192 414 0 18 5915 Actinomyces israelii (SP175) 0 0 0 0 52 0 0 0 0 0 0 0 0 0 20 0 0 43 0 0 0 0 0 0 0 Streptococcus sanguinis (SP179) 0 0 99 0 0 0 0 0 6607 0 0 0 0 148 0 262 349 0 77 0 59 4618 0 1147 51 Streptococcus periodonticum (SP18) 5864 0 0 207 2008 0 0 0 0 358 0 3453 14 470 0 0 0 0 0 0 0 658 409 0 0 Alloprevotella sp._HMT_308 (SP182) 0 0 31 0 161 48 6 0 7 0 171 13 0 0 0 0 61 0 19 0 799 102 0 0 0 Leptotrichia sp._HMT_221 (SP19) 0 0 0 0 115 0 0 0 0 0 0 668 817 2746 0 0 47 0 0 0 0 268 0 0 1078 Streptococcus gordonii (SP195) 512 1741 0 0 330 5224 0 0 0 0 0 0 8613 0 12 0 0 0 101 0 0 8033 0 710 24 Prevotella histicola (SP2) 870 0 1671 9237 1569 183 0 5319 175 26 1150 13930 5003 27544 0 38 480 3381 89 100 31862 1752 0 0 3807 Streptococcus downii (SP20) 0 0 0 17 9 737 0 0 0 0 0 0 62 26 0 0 1908 251 889 0 31 77 0 0 0 Streptococcus sp._HMT_066 (SP206) 5597 4986 0 0 255 1616 1780 0 0 0 8176 418 149 0 0 0 0 0 6972 329 0 0 0 685 0 Leptotrichia sp._HMT_212 (SP208) 0 0 0 0 177 0 0 0 0 7 0 0 0 0 0 0 1068 0 0 0 0 21 13 0 0 Granulicatella adiacens (SP21) 5756 1136 4152 709 7851 4137 5707 682 1017 2726 1174 3268 1528 3261 6424 362 11195 17465 3888 6034 4004 4855 486 7158 869 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP211) 0 0 0 0 3 0 0 0 0 0 0 0 35 0 0 19 0 0 0 0 0 0 0 0 0 Lactobacillus crispatus (SP215) 0 0 0 0 0 0 0 2788 214 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 Parvimonas micra (SP217) 0 0 0 0 29 0 0 0 0 0 0 0 0 120 0 0 0 0 0 0 0 28 0 0 0 Actinomyces sp._HMT_170 (SP225) 195 0 0 0 9 734 0 0 14658 0 0 0 53 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus constellatus (SP226) 0 0 0 0 20 0 0 5 0 17 0 0 11 0 0 0 0 0 0 0 0 20 6 0 0 Ruminococcaceae_[G-2] bacterium_HMT_085 (SP23) 0 0 0 231 171 25 0 0 0 0 0 125 30 179 0 0 0 0 0 0 0 7 0 0 0 Cardiobacterium hominis (SP237) 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 5 0 0 3 0 0 10 0 0 0 Streptococcus vestibularis (SP239) 0 0 0 0 233 0 0 63 0 0 266 1177 252 0 0 0 416 0 0 0 53 1419 0 0 172 Schaalia odontolyticus (SP24) 8265 482 608 133 2739 1098 14748 8787 757 15 7603 721 665 1156 0 89 3472 3672 77 3032 6918 2910 113 3140 2805 Bifidobacterium dentium (SP242) 0 0 0 0 16 0 0 0 0 0 0 6 174 0 8 0 0 0 0 2 0 0 8 0 0 Neisseria flava (SP25) 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 98 0 9 0 0 0 4 Rothia dentocariosa (SP258) 111 9 0 0 337 0 0 0 3528 0 23 0 20911 0 366 22 0 232 10 0 12 10827 75 991 13 Schaalia sp._HMT_180 (SP26) 652 0 0 666 59 0 0 0 0 0 0 1658 61 59 0 48 13 340 0 0 0 107 42 0 0 Selenomonas artemidis (SP266) 0 0 0 0 6 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 Streptococcus parasanguinis_clade_411 (SP28) 30839 7858 11064 1866 4996 8410 41946 19697 2514 22644 22389 9827 5391 55 20549 4390 8680 14450 219 1920 12529 17429 4187 9265 12450 Campylobacter gracilis (SP282) 36 0 0 0 0 0 0 0 3 0 0 0 0 0 10 0 0 0 0 0 0 30 0 8 0 Prevotella pallens (SP29) 94 0 7 41 627 468 0 0 0 0 48 0 166 0 0 0 0 0 5 0 119 0 0 0 0 Rothia aeria (SP296) 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 69 0 0 23 0 0 0 0 0 0 Neisseria mucosa (SP299) 0 0 0 0 213 0 0 0 0 0 0 0 0 0 0 56 0 0 0 0 0 7970 0 0 0 Streptococcus sp._HMT_074 (SP302) 65 0 0 0 1331 0 0 0 0 67 989 839 0 72 0 0 10377 124 0 31 1857 15 26 2023 0 Cutibacterium acnes (SP314) 0 97 6 3 6 22 0 0 9 3 0 0 19 11 109 0 118 24 3 0 0 8 156 31 4 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP325) 0 0 0 0 349 25 0 0 0 0 6 113 53 0 0 0 0 0 48 0 0 0 0 0 0 Bifidobacterium longum (SP328) 587 226 339 202 220 0 0 15000 0 0 0 873 0 990 0 0 24 0 0 0 251 59 0 92 6379 Lautropia mirabilis (SP332) 0 0 0 0 81 3 0 0 0 0 0 0 0 0 0 0 0 0 65 0 17 107 0 0 0 Peptostreptococcus stomatis (SP34) 0 0 0 0 1310 44 0 0 0 0 0 0 192 0 0 0 0 0 41 0 0 0 0 0 0 Bifidobacterium scardovii (SP353) 0 0 0 6 0 128 0 20 1296 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 Alloscardovia omnicolens (SP356) 391 0 924 6 53 0 0 0 0 0 910 328 0 0 0 0 0 0 25 0 219 10 0 0 700 Schaalia meyeri (SP359) 0 0 0 291 292 0 262 0 0 0 0 194 0 0 0 0 944 0 0 0 0 0 0 0 0 Gemella haemolysans (SP37) 223 0 19 38 5600 1907 196 100 2895 24 0 100 330 399 1695 0 7651 1143 2647 2269 69 1951 244 698 31 Schaalia sp._HMT_172 (SP38) 2666 0 0 2319 7876 1360 0 5 0 0 55 1916 10130 8880 0 0 0 0 0 0 0 0 0 0 0 Cryptobacterium curtum (SP392) 0 0 0 20 0 0 0 37 0 0 0 6 0 0 0 0 0 0 0 0 0 2 0 0 110 Bergeyella sp._HMT_322 (SP40) 0 0 4 49 76 432 47 25 14 0 0 11 79 10 0 0 439 0 1565 0 71 26 0 176 0 Streptococcus peroris (SP400) 0 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 1515 3 988 0 0 Streptococcus intermedius (SP416) 101 71 0 0 0 0 0 0 0 0 0 0 0 114 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp._HMT_417 (SP42) 0 0 246 3138 64 5429 0 7 0 0 34 938 1538 0 0 0 0 0 30 0 0 0 23 0 291 Schaalia lingnae_[Not_Validly_Published] (SP43) 3205 37 1366 89 1817 74 2833 685 1689 14 1110 877 214 637 0 203 110 14788 19 885 1156 786 0 1276 734 Kingella oralis (SP439) 0 0 0 0 20 0 0 0 12 0 0 0 202 0 5 36 0 110 0 0 0 112 19 0 0 Haemophilus sp._HMT_036 (SP44) 0 0 0 0 103 0 0 0 0 0 0 0 0 0 0 0 0 406 0 0 0 0 0 121 0 Prevotella salivae (SP46) 1573 24 1130 207 391 163 0 1416 0 0 594 1090 23 1077 0 0 0 0 22 381 434 170 0 728 194 Haemophilus parahaemolyticus (SP47) 0 0 0 0 1053 246 0 0 0 0 0 0 20 0 0 0 4153 0 616 0 0 0 0 0 0 Capnocytophaga gingivalis (SP48) 0 0 4 0 38 126 0 0 4 0 0 0 18 0 0 24 766 0 60 0 0 112 0 183 0 Gemella sanguinis (SP49) 189 166 0 69 3428 1666 1017 391 57 1438 609 955 479 710 0 0 7374 2019 3481 788 2027 2823 0 2305 0 Veillonella atypica (SP5) 2180 374 6117 3790 2408 1385 1662 5322 443 292 6954 7020 3101 16191 3982 681 769 3772 217 221 5147 1613 325 3888 7190 Rothia mucilaginosa (SP50) 39261 21800 31824 1658 36171 22152 82471 9775 48407 69728 25934 16894 8910 5725 31658 4312 76414 42640 44103 11541 18016 20547 6310 45682 13720 Schaalia odontolytica (SP51) 3215 542 0 0 2307 1815 1796 6 15 0 0 328 205 0 0 0 0 0 0 0 343 1157 0 200 0 Mogibacterium diversum (SP52) 620 53 125 69 1089 57 119 0 0 0 342 377 302 0 0 0 0 0 52 112 803 67 0 636 0 Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP59) 0 168 0 23 222 60 0 0 0 0 0 291 0 0 0 0 71 0 6 0 167 0 0 0 0 Actinomyces sp._HMT_169 (SP60) 0 0 100 0 0 0 0 0 0 0 0 0 314 0 84 0 49 169 0 0 0 1988 0 2309 0 Fusobacterium periodonticum (SP64) 160 0 0 99 2085 2062 0 770 0 0 0 53 968 21 0 0 2178 0 1473 0 2261 117 0 2270 0 Prevotella vespertina (SP65) 0 0 0 906 0 0 0 0 0 0 339 0 0 0 0 0 0 0 0 0 0 81 0 0 0 Leptotrichia wadei (SP68) 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62 0 0 0 0 0 312 0 0 0 Solobacterium moorei (SP69) 397 23 370 108 967 160 0 0 5 0 214 484 65 263 0 0 0 0 62 0 894 145 0 325 55 Ligilactobacillus salivarius (SP7) 0 125 0 0 0 0 0 4511 0 0 0 97 0 259 3 0 0 0 0 0 0 39 0 0 3286 Oribacterium sinus (SP70) 0 646 1342 484 3140 411 1602 193 0 0 52 183 1232 291 0 0 0 0 165 3056 552 395 0 1397 6 Fusobacterium nucleatum (SP72) 26 0 0 0 152 1337 0 0 41 0 0 0 0 144 205 24 973 0 11 122 11 112 0 34 8 Capnocytophaga sputigena (SP78) 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 17 295 0 5 0 10 374 6 0 0 Capnocytophaga leadbetteri (SP8) 0 0 0 0 0 1109 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 0 15 0 Veillonella rogosae (SP9) 254 280 122 2 128 395 104 0 0 0 0 141 0 17 0 0 0 0 9711 0 0 53 0 0 0 Leptotrichia hongkongensis (SP90) 0 0 0 0 0 0 0 0 59 0 0 0 0 11 0 29 0 0 0 0 0 1603 0 345 0 Abiotrophia defectiva (SP91) 0 0 0 0 146 0 0 0 0 0 0 0 0 0 0 0 143 0 0 0 145 2282 0 0 20 Veillonella parvula (SP92) 3871 5494 669 98 594 506 5395 219 95 115 5741 0 688 58 142 774 0 3211 0 1490 165 836 71 1153 36 Veillonella dispar (SP93) 1921 4289 799 470 531 68 3910 19 104 0 56 2232 1407 5929 0 954 967 3393 0 0 3272 1112 172 2431 134 Eikenella corrodens (SP95) 0 0 0 0 18 0 0 0 0 0 0 0 0 0 0 17 0 0 8 0 8 17 0 7 0 Neisseria perflava (SP97) 0 0 0 0 2506 12953 0 0 0 0 0 0 0 40 0 0 0 0 7249 0 5299 1159 0 18167 0 Prevotella melaninogenica (SP99) 4354 674 1283 243 9385 760 2072 0 12 0 15368 4105 630 8 0 22 331 0 651 3500 2600 1414 0 15636 10 Actinomyces sp._HMT_175_nov_97.551% (SPN195) 467 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 0 1164 0 Leptotrichia sp._HMT_215_nov_97.614% (SPN86) 0 0 0 0 0 292 0 0 0 0 0 0 32 0 0 0 0 0 67 0 0 0 0 0 0 Reyranella massiliensis_soli (SPP12) 104 0 0 0 0 31 7 46 0 8 0 0 11 0 89 24 0 0 0 0 0 8 1629 12 0 Veillonella denticariosi_dispar_parvula (SPP13) 2344 2633 331 822 2856 14 3342 1430 62 0 2509 1117 1544 1816 0 1430 527 0 0 2880 766 1401 105 680 430 Afipia birgiae_broomeae (SPP14) 1208 11 0 4 20 19 0 13 23 0 0 6 11 0 39 7 0 13 0 0 2 0 121 0 0 Streptococcus infantis_infantis_clade_431_infantis_clade_638 (SPP2) 0 0 0 0 74 1459 0 34 0 23 689 0 0 0 0 0 0 0 0 125 0 0 0 0 65 Streptococcus infantis_infantis_clade_638 (SPP21) 0 1139 0 46 749 17057 1918 2610 9 1786 6 103 419 52 18 0 24959 0 3457 6855 1358 3524 0 1906 30 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP32) 8111 1163 0 454 1677 134 4371 1805 0 2108 0 3962 351 7940 0 0 744 0 392 4532 3727 1071 11 1797 0 Oribacterium asaccharolyticum_parvum (SPP36) 0 0 0 113 122 88 0 0 0 0 12 29 199 18 0 0 0 0 49 0 306 84 0 146 5 Veillonella dispar_parvula (SPP37) 540 6084 177 953 2229 957 1045 3029 730 0 2724 652 2127 0 88 0 23 5189 0 0 8818 1247 16 5555 97 Streptococcus sp._HMT_061_sp._HMT_066 (SPP4) 57 0 0 0 17 11 0 0 0 0 0 0 0 0 0 0 10561 0 8 0 55 0 0 653 0 Lachnoanaerobaculum gingivalis_umeaense (SPP6) 0 7 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 474 36 0 0 0 Staphylococcus capitis_epidermidis (SPP7) 4 81 0 0 18 79 8 0 4 0 0 0 11 0 125 0 58 16 10 0 23 0 22 34 0 Streptococcus multispecies_sppn5_2_nov_97.976% (SPPN5) 4599 0 0 0 1974 11 0 0 0 3776 0 2572 436 5706 1638 0 3482 0 0 2560 516 1058 0 943 0