taxon lfc_(Intercept) lfc_GroupPeri-implant Saliva se_(Intercept) se_GroupPeri-implant Saliva W_(Intercept) W_GroupPeri-implant Saliva p_(Intercept) p_GroupPeri-implant Saliva q_(Intercept) q_GroupPeri-implant Saliva diff_(Intercept) diff_GroupPeri-implant Saliva Haemophilus parainfluenzae (SP10) -0.42296247097438 0.289472033728451 1.61171516963943 2.79157256114498 -0.262430036610629 0.103694970267842 0.792989918048708 0.917411418282559 1 1 FALSE FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP106) 1.02221379739081 -4.04605677136713 1.31234052335291 2.27304046327877 0.778924203894239 -1.78001968584882 0.436024365209416 0.0750727390550236 1 1 FALSE FALSE Lancefieldella parvula (SP109) -1.12620526408441 2.39920041305854 0.849086284858677 1.47066058538513 -1.32637316626997 1.6313760203414 0.184716122498548 0.102811001538066 1 1 FALSE FALSE Parascardovia denticolens (SP110) 0.403682993794899 -2.19046436057939 0.646144509874766 1.11915512013478 0.624756517505875 -1.95724821445268 0.532130873157761 0.0503182927084833 1 1 FALSE FALSE Lachnoanaerobaculum orale (SP112) 0.12433879895861 -1.35243177607052 0.971422748402542 1.6825535558614 0.127996589706262 -0.803797163756922 0.898151671863139 0.421514128054039 1 1 FALSE FALSE Stomatobaculum longum (SP116) 0.246038624853122 -1.71753125375405 1.03892125103282 1.79946439185186 0.236821245699353 -0.954468041452331 0.81279546865509 0.339846778832461 1 1 FALSE FALSE Streptococcus infantis_clade_431 (SP118) -0.578690829459516 0.756657109183859 1.07796485046026 1.86708988977056 -0.536836455485938 0.405260139498073 0.591380587552286 0.685286303014999 1 1 FALSE FALSE Streptococcus anginosus (SP12) 0.467950867564832 -2.38326798188918 1.36768524969713 2.36890034123796 0.342148069278701 -1.00606510979002 0.732239463930514 0.314384250815873 1 1 FALSE FALSE Prevotella oris (SP125) 0.251726502727518 -1.73459488737724 0.991077852165559 1.71659719420698 0.253992662814008 -1.01048451741095 0.799501226499923 0.312263213485689 1 1 FALSE FALSE Campylobacter concisus (SP13) -0.44589639419862 0.358273803401172 0.986998997869491 1.70953241132952 -0.451769855046581 0.209574150818549 0.65143478836838 0.834000056255348 1 1 FALSE FALSE Streptococcus sp._HMT_064 (SP131) 0.149727273160215 -1.42859719867533 1.51909411951217 2.63114819647418 0.0985635262733406 -0.542955809402792 0.921484830777424 0.587160228757982 1 1 FALSE FALSE Streptococcus sp._HMT_423 (SP136) 1.12781623174065 -4.36286407441665 1.42649690530643 2.4707651168305 0.790619473162043 -1.76579475106615 0.429166079850602 0.0774302894446696 1 1 FALSE FALSE Streptococcus oralis (SP137) 0.394873300980988 -2.16403528213765 1.26598191088098 2.192744991109 0.311910697607203 -0.986906954941064 0.755108392298605 0.323688254388789 1 1 FALSE FALSE Streptococcus salivarius (SP14) -2.01619332851057 5.06916460633703 1.07282117669887 1.85818078547828 -1.87933774267442 2.72802552149536 0.0601983912778576 0.00637146782766583 1 0.426888344453611 FALSE FALSE Prevotella nanceiensis (SP141) -0.306079906844392 -0.0611756586615112 0.783260214204638 1.35664648654971 -0.390776783109304 -0.0450932938448069 0.695962237542265 0.964032946723583 1 1 FALSE FALSE Microbacterium hydrothermale (SP152) 0.941772777164985 -3.80473371068964 0.869637133981663 1.50625570020482 1.08294912942947 -2.52595473011141 0.278831003305004 0.0115384348419422 1 0.738459829884299 FALSE FALSE Leptotrichia sp._HMT_215 (SP153) 0.536108627076248 -2.58774126042343 1.32068338367624 2.28749072123923 0.40593274186879 -1.13125759872877 0.684792019772003 0.257946685205291 1 1 FALSE FALSE Streptococcus mitis (SP161) -0.351101018791244 0.073887677179043 1.1715076368009 2.0291107483941 -0.299700153684031 0.0364138217874604 0.764405881368742 0.970952393296271 1 1 FALSE FALSE Actinomyces israelii (SP175) 0.869565125938547 -3.58811075701033 1.33178183885245 2.30671380948995 0.652933611625026 -1.55550755462106 0.513799078931558 0.119825236760635 1 1 FALSE FALSE Sphingobium yanoikuyae (SP187) 0.953128246562745 -3.83880011888292 0.895037869534771 1.55025106473243 1.06490270300872 -2.47624414278051 0.286919961726253 0.0132772751194925 1 0.83646833252803 FALSE FALSE Streptococcus gordonii (SP195) 0.606972350746023 -2.80033243143276 1.46248600430847 2.53310006482066 0.415027801262979 -1.10549617455835 0.678121551273414 0.268944651093341 1 1 FALSE FALSE Prevotella histicola (SP2) -0.463335461368561 0.410591004910994 1.20758555179337 2.09159953019221 -0.383687483408913 0.196304789221894 0.701210090683855 0.844371613064311 1 1 FALSE FALSE Streptococcus downii (SP20) -0.479667716553667 0.459587770466312 0.872110231715366 1.51053923113168 -0.550008128685983 0.304254110713824 0.582313798223342 0.760934303180857 1 1 FALSE FALSE Agrobacterium tumefaciens (SP203) 1.00099748111796 -3.98240782254857 0.78774920612003 1.36442164862194 1.27070579486619 -2.91875156522969 0.203833333262975 0.00351436182196314 1 0.246005327537419 FALSE FALSE Streptococcus sp._HMT_066 (SP206) -0.409033959357011 0.247686498876345 1.01889792862438 1.76478298010412 -0.401447434395366 0.140349551003564 0.68809073197632 0.88838381568653 1 1 FALSE FALSE Granulicatella adiacens (SP21) -0.557376405987024 0.692713838766384 0.58995448623743 1.02183114431642 -0.944778654946451 0.677914196116805 0.344771891363147 0.497826098430265 1 1 FALSE FALSE Actinomyces sp._HMT_170 (SP225) 0.656510112395362 -2.94894571638077 1.4255784150224 2.46917424499232 0.46052192252437 -1.19430442074369 0.64514163963167 0.232358908993788 1 1 FALSE FALSE Schaalia odontolyticus (SP24) -0.842210404889728 1.5472158354745 1.21323372724773 2.10138245704922 -0.69418644237687 0.736284739736101 0.487565293804502 0.46155743119603 1 1 FALSE FALSE Bifidobacterium dentium (SP242) 0.299953292536445 -1.87927525680402 0.495907229960323 0.858936518132022 0.604857671787612 -2.18790937063776 0.545273569974992 0.0286762045915884 1 1 FALSE FALSE Novosphingobium silvae (SP247) 0.929523693793794 -3.76798646057607 0.847253267017407 1.46748570535287 1.09710251937535 -2.56764781205826 0.272596579035517 0.0102391125702762 1 0.665542317067951 FALSE FALSE Rothia dentocariosa (SP258) 0.832179571607677 -3.47595409401772 1.52011944740021 2.63292411647069 0.547443540065825 -1.32018772294777 0.584074049410643 0.18677234992489 1 1 FALSE FALSE Schaalia sp._HMT_180 (SP26) 0.734846832183772 -3.183955875746 1.41237755590074 2.44630968629004 0.52029064686965 -1.30153426346222 0.602861013888493 0.193075644304261 1 1 FALSE FALSE Selenomonas artemidis (SP266) 0.613004019829903 -2.8184274386844 0.905783950365039 1.56886382271269 0.67676626372421 -1.79647678650089 0.498554266151361 0.0724187213510404 1 1 FALSE FALSE Streptococcus parasanguinis_clade_411 (SP28) -1.63724099919394 3.93230761838713 1.00844382580651 1.74667594287602 -1.62353217630594 2.25130919929676 0.104475690801483 0.0243659605581197 1 1 FALSE FALSE Campylobacter gracilis (SP282) 0.969184797278527 -3.88696977103027 0.987591152423352 1.71055805310275 0.981362373387348 -2.27234016640346 0.326414074231754 0.0230659725706944 1 1 FALSE FALSE Prevotella pallens (SP29) 0.205656510135461 -1.59638490960107 0.938507506290352 1.62554268417966 0.219131449409885 -0.982062744422304 0.826547652978544 0.326068938033384 1 1 FALSE FALSE Streptococcus sp._HMT_074 (SP302) -0.156853378117755 -0.508855244841423 0.695642435969222 1.20488804299967 -0.225479887378083 -0.422325748684985 0.821605970087684 0.672787266408737 1 1 FALSE FALSE Rothia aerolata (SP306) 0.522620492531617 -2.54727685678954 0.944563467721463 1.63603191706702 0.553293145872258 -1.55698481809337 0.580062693676628 0.119474089974411 1 1 FALSE FALSE Cutibacterium acnes (SP314) -0.382367994438191 0.167688604119883 0.623515688583855 1.07996085194353 -0.613245186029937 0.155272854398477 0.539714231164391 0.876606215097164 1 1 FALSE FALSE Gemella haemolysans (SP37) -1.24968800961618 2.76964864965385 0.867131887952453 1.50191648679677 -1.44117409009955 1.84407633447106 0.149535506298541 0.0651720162912727 1 1 FALSE FALSE Bergeyella sp._HMT_322 (SP40) 0.492404185793148 -2.45662793657413 1.12960170777735 1.95652755018695 0.435909562107534 -1.2556061049789 0.662902347154443 0.209258816842441 1 1 FALSE FALSE Epilithonimonas hispanica (SP428) 0.835608609328694 -3.48624120718077 0.730443661241944 1.26516553333768 1.14397407174147 -2.75556132009351 0.252634390043721 0.0058591520666842 1 0.40428149260121 FALSE FALSE Schaalia lingnae_[Not_Validly_Published] (SP43) -0.48383876448289 0.472100914253984 1.20541694520432 2.08784339339835 -0.401387060641393 0.22611893006283 0.688135174431821 0.821108921791818 1 1 FALSE FALSE Kingella oralis (SP439) 0.462618599746659 -2.36727117843466 1.03587436065091 1.79418702290531 0.446597210356633 -1.31941160437186 0.655165910162725 0.187031544336059 1 1 FALSE FALSE Prevotella salivae (SP46) -0.388710111938029 0.186714956619398 0.817588384377144 1.41610462141937 -0.475434973595125 0.131851103227284 0.634476971471406 0.895102064830453 1 1 FALSE FALSE Capnocytophaga gingivalis (SP48) 0.584463734093549 -2.73280658147534 1.05788583522548 1.83231201521796 0.552482805452231 -1.49145263403747 0.580617611758464 0.135842698089457 1 1 FALSE FALSE Gemella sanguinis (SP49) -1.16433193313911 2.51358042022263 0.939707804339002 1.62762166138414 -1.23903614268491 1.54432721059086 0.215332113526151 0.122509083842121 1 1 FALSE FALSE Veillonella atypica (SP5) -1.89870750131996 4.7167071247652 0.539726420307068 0.934833582159117 -3.5179072765045 5.04550458475333 0.000434964318019209 4.52326047207215e-07 0.031317430897383 3.25674753989195e-05 TRUE TRUE Rothia mucilaginosa (SP50) -1.75203902049966 4.2767016823043 1.31949304007162 2.28542898563757 -1.32781224856219 1.8712905582193 0.184240139527568 0.061304818527186 1 1 FALSE FALSE Mogibacterium diversum (SP52) -0.19912682553771 -0.382034902581557 0.710497117793434 1.23061710664948 -0.280264086300774 -0.310441729208283 0.779274902048205 0.75622506519191 1 1 FALSE FALSE Moraxella osloensis (SP53) 1.78997216753112 -6.34933188178805 0.996828964808653 1.72655841350488 1.79566628852395 -3.67744979383527 0.0725476064200664 0.000235577424466956 1 0.0167259971371539 FALSE TRUE Actinomyces sp._HMT_169 (SP60) 0.62312079051326 -2.84877775073447 1.17038820738803 2.02717183977552 0.532405219550092 -1.40529662796121 0.594445370898572 0.15993309066387 1 1 FALSE FALSE Fusobacterium periodonticum (SP64) 0.0856626714459921 -1.23640339353266 1.04929658652715 1.81743500007362 0.0816381874732948 -0.680301300174465 0.934934433419928 0.496313701455831 1 1 FALSE FALSE Oribacterium sinus (SP70) -0.32954948850187 0.00923308631092225 1.12092402825694 1.9414973683658 -0.293998058917807 0.0047556522410813 0.768759386623079 0.99620555280298 1 1 FALSE FALSE Fusobacterium nucleatum (SP72) -0.0578620426856817 -0.805829251137644 1.359100640385 2.35403136174622 -0.0425737733956853 -0.34231882558263 0.966041302326981 0.732110969675299 1 1 FALSE FALSE Capnocytophaga sputigena (SP78) 0.62031075983304 -2.84034765869381 1.0653887738088 1.84530748605035 0.582238873810737 -1.5392272996048 0.560405792218929 0.123748815155529 1 1 FALSE FALSE Capnocytophaga leadbetteri (SP8) 0.492738755540719 -2.45763164581684 1.27772477318842 2.21308422525176 0.385637631734372 -1.11050072915199 0.699765058917784 0.266783314082284 1 1 FALSE FALSE Acinetobacter lwoffii (SP81) 0.851430936917959 -3.53370818994857 0.744072920041536 1.28877210204807 1.14428426836234 -2.74191859393365 0.252505765296746 0.00610814775660236 1 0.415354047448961 FALSE FALSE Veillonella parvula (SP92) -0.34382939965657 0.0520728197750211 0.994635258948369 1.722758803498 -0.345683904288796 0.0302264133953569 0.729580281898585 0.975886483309056 1 1 FALSE FALSE Veillonella dispar (SP93) 0.0141781924660538 -1.02194995659285 1.28491870576644 2.22554448198312 0.0110343108886384 -0.459190982191566 0.991196072358413 0.646097025776898 1 1 FALSE FALSE Acinetobacter johnsonii (SP98) 1.20223146954529 -4.58610978783057 1.00407527175551 1.73910938530407 1.19735193502309 -2.63704504534584 0.231169409570151 0.00836317252149161 1 0.551969386418446 FALSE FALSE Prevotella melaninogenica (SP99) -0.0351030844007033 -0.874106125992579 1.21053815012996 2.09671358052554 -0.0289979166678345 -0.416893434616608 0.976866252155166 0.676756355960437 1 1 FALSE FALSE Leptotrichia sp._HMT_215_nov_97.614% (SPN86) 0.525127987038614 -2.55479934031053 1.10990821984637 1.92241742851224 0.473127397066491 -1.3289514037998 0.636122291655445 0.183864003144824 1 1 FALSE FALSE Reyranella massiliensis_soli (SPP12) -0.129216278461681 -0.591766543809647 0.676867602321314 1.17236907721784 -0.190903328832011 -0.50476130367919 0.848601332108364 0.613726497723041 1 1 FALSE FALSE Veillonella denticariosi_dispar_parvula (SPP13) -0.186506887232166 -0.41989471749819 1.01094985447249 1.75101651185071 -0.184486783797486 -0.239800547085869 0.853631594215032 0.810484882831136 1 1 FALSE FALSE Afipia birgiae_broomeae (SPP14) -0.233410145840042 -0.279184941674563 0.571408611433244 0.989708746884761 -0.408482023493814 -0.282087980482475 0.682919825596287 0.777876049328995 1 1 FALSE FALSE Streptococcus infantis_infantis_clade_431_infantis_clade_638 (SPP2) -0.368521949028362 0.126150467890395 0.937155066164804 1.62320018916801 -0.393234761603001 0.0777171347885654 0.694146097427127 0.9380530637409 1 1 FALSE FALSE Streptococcus infantis_infantis_clade_638 (SPP21) -0.841249600446231 1.544333422144 1.2966563602766 2.2458746959564 -0.648783768944596 0.687631159888176 0.516478150062748 0.491685080698471 1 1 FALSE FALSE Streptococcus parasanguinis_parasanguinis_clade_721 (SPP32) -0.296230769640464 -0.0907230702732974 1.10751723463357 1.91827612064352 -0.267472830559132 -0.0472940622556791 0.789105130433477 0.962278860422673 1 1 FALSE FALSE Veillonella dispar_parvula (SPP37) 0.296619892936971 -1.8692750580056 1.37105065502765 2.37472939425848 0.216344955490349 -0.787152869933331 0.828718869289916 0.431192382911201 1 1 FALSE FALSE Staphylococcus capitis_epidermidis (SPP7) -0.466526839944332 0.420165140638308 0.654729755573248 1.13402520188002 -0.712548705741753 0.37050776291545 0.476125062195944 0.711004193510468 1 1 FALSE FALSE Streptococcus multispecies_sppn5_2_nov_97.976% (SPPN5) -0.637997645503846 0.93457755731685 1.07586958572454 1.86346078479298 -0.59300648886193 0.501527890977689 0.553176809672072 0.615999653832648 1 1 FALSE FALSE