Taxon F16728.S01 F16728.S02 F16728.S03 F16728.S05 F16728.S06 F16728.S07 F16728.S08 F16728.S09 F16728.S10 F16728.S11 F16728.S12 F16728.S13 F16728.S14 F16728.S15 F16728.S17 F16728.S18 F16728.S19 F16728.S21 F16728.S22 F16728.S24 F16728.S25 Leptotrichia sp._HMT_221 (SP10) 0 0 0 140 0 0 0 0 0 0 662 814 2758 0 47 0 0 0 268 0 1078 Capnocytophaga gingivalis (SP100) 0 0 4 27 126 0 0 4 0 0 0 18 0 0 766 0 61 0 112 183 0 Streptococcus oralis_subsp._tigurinus_clade_070 (SP101) 0 0 0 142 0 0 0 0 271 0 0 0 0 0 0 70 0 0 1416 1401 0 Leptotrichia sp._HMT_212 (SP102) 0 0 0 170 0 0 0 0 7 0 0 0 0 0 1069 0 0 0 21 0 0 Stomatobaculum sp._HMT_097 (SP106) 0 35 0 433 11 0 0 0 0 0 299 392 0 0 0 0 386 0 0 0 0 Schaalia sp._HMT_172 (SP107) 2699 0 0 6380 1360 0 5 0 0 55 2523 10153 8913 0 0 0 0 0 0 0 0 Parvimonas micra (SP108) 0 0 0 29 0 0 0 0 0 0 0 0 120 0 0 0 0 0 28 0 0 Streptococcus mitis (SP11) 2303 4437 1701 5077 316 2546 0 11519 1249 64 1371 1051 890 0 5244 226 19761 50 23091 11305 0 Streptococcus sp._HMT_064 (SP111) 0 79 0 0 5492 0 0 161 0 32 7 12151 0 328 4037 0 0 0 0 0 0 Streptococcus sp._HMT_066 (SP112) 5607 4952 0 254 1597 1139 0 0 0 8154 417 150 0 0 0 0 7045 0 0 684 0 Streptococcus sanguinis (SP113) 0 0 98 0 0 0 0 6619 0 0 0 0 148 0 348 0 77 59 4637 1150 52 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP115) 0 0 0 349 25 0 0 0 0 6 113 53 0 0 0 0 48 0 0 0 0 Streptococcus anginosus (SP117) 0 0 0 77 0 0 0 11608 0 0 0 0 0 448 0 91 0 0 4 0 0 Lautropia mirabilis (SP120) 0 0 0 81 0 0 0 0 0 0 0 0 0 0 0 0 65 17 108 0 0 Rothia dentocariosa (SP122) 111 9 0 341 0 0 0 3530 0 23 0 20924 0 366 0 239 10 12 10836 994 13 Actinomyces israelii (SP125) 0 0 0 52 0 0 0 0 0 0 0 0 0 18 0 43 0 0 0 0 0 Gemella haemolysans (SP13) 223 0 19 5602 1907 68 36 2936 33 0 100 347 399 1695 7648 1154 2650 69 3031 688 31 Prevotella oris (SP131) 0 0 0 127 0 0 9 0 0 4 0 5 0 430 0 0 0 0 15 0 0 Prevotella nanceiensis (SP136) 3 0 0 523 60 0 0 0 0 0 0 21 0 0 0 0 564 285 0 1214 0 Campylobacter gracilis (SP137) 36 0 0 0 0 0 0 3 0 0 0 0 0 10 0 0 0 0 30 8 0 Lachnoanaerobaculum orale (SP14) 776 573 791 350 76 8089 659 0 0 361 246 131 1401 0 130 138 0 0 0 1380 188 Streptococcus sp._HMT_423 (SP140) 8 29 50 0 0 0 0 22053 0 54 0 72 0 1235 0 0 77 336 382 184 0 Streptococcus constellatus (SP142) 0 0 0 21 0 0 5 0 17 0 0 10 0 0 0 0 0 0 20 0 0 Streptococcus peroris (SP146) 0 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 1527 3 0 0 Alloprevotella sp._HMT_308 (SP147) 0 0 31 161 47 6 0 7 0 174 13 0 0 0 61 0 19 799 62 0 0 Actinomyces graevenitzii (SP15) 2509 1077 8 5465 274 8824 12345 1799 0 6 3538 1467 3082 0 703 0 0 8200 413 18 5894 Schaalia odontolytica (SP155) 3231 543 0 2315 1817 1796 6 15 0 0 325 204 0 0 0 31 0 343 1158 199 0 Fusobacterium nucleatum (SP16) 26 0 0 149 1339 0 0 41 0 0 0 0 144 205 973 0 12 11 113 34 8 Haemophilus sp._HMT_036 (SP165) 0 0 0 103 0 0 0 0 0 0 0 0 0 0 0 406 0 0 0 121 0 Lachnoanaerobaculum umeaense (SP169) 0 0 0 89 0 0 0 0 0 0 0 0 0 0 0 0 45 18 0 0 0 Lachnoanaerobaculum gingivalis (SP170) 0 0 168 0 322 0 128 0 0 153 129 87 0 0 165 0 119 290 0 0 0 Schaalia sp._HMT_180 (SP173) 651 0 0 46 0 0 0 0 0 0 1637 0 59 0 13 340 0 0 107 0 0 Ligilactobacillus salivarius (SP175) 0 146 0 0 0 0 4511 0 0 0 97 0 218 3 0 0 0 0 39 0 3288 Peptostreptococcus stomatis (SP178) 0 0 0 1311 61 0 0 0 0 0 0 192 0 0 0 0 41 0 0 0 0 Actinomyces sp._HMT_169 (SP18) 0 0 100 0 0 0 0 0 0 0 0 315 0 84 50 169 0 0 1990 2316 0 Lachnospiraceae_[G-2] bacterium_HMT_096 (SP184) 0 0 0 0 67 0 0 0 0 408 517 0 0 0 0 0 0 0 0 0 0 Streptococcus australis (SP185) 941 8 0 75 642 0 0 0 0 0 0 0 0 0 0 0 20150 25 0 0 0 Cryptobacterium curtum (SP186) 0 0 0 0 0 0 37 0 0 0 6 0 0 0 0 0 0 0 2 0 110 Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP187) 89 7 222 27 0 0 0 0 0 0 89 86 13 0 0 0 32 0 0 0 0 Granulicatella adiacens (SP19) 5759 1136 4130 7857 4140 5710 683 1017 2724 1166 3270 1531 3261 6444 11213 17556 3890 4007 4856 7292 873 Streptococcus sp._HMT_057 (SP191) 0 0 0 856 316 0 685 0 0 0 2168 329 0 0 0 0 0 0 0 0 0 Neisseria flava (SP192) 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 98 9 0 0 4 Lancefieldella parvula (SP193) 1462 425 1505 1382 346 2795 4446 34 11 1524 3191 374 8541 53 40 2152 112 2491 597 2447 3064 Fusobacterium periodonticum (SP233) 160 0 0 2080 2057 0 770 0 0 0 53 974 21 0 2180 0 1476 2261 117 2276 0 Veillonella rogosae (SP234) 253 282 122 128 395 104 0 0 0 0 142 0 57 0 0 0 9721 0 53 0 0 Leptotrichia sp._HMT_417 (SP24) 0 0 246 87 5436 0 7 0 0 34 938 1539 0 0 0 0 30 0 0 0 293 Bifidobacterium longum (SP243) 587 226 339 221 0 0 15002 0 0 0 873 0 991 0 24 0 0 251 59 92 6383 Capnocytophaga leadbetteri (SP25) 0 0 0 0 1109 0 0 0 0 0 0 0 0 0 0 0 50 0 0 18 0 Prevotella sp._HMT_309 (SP250) 13 0 87 0 0 0 0 0 0 0 162 0 0 0 0 0 0 0 0 0 0 Streptococcus periodonticum (SP254) 5796 0 0 1982 0 0 0 0 357 0 3454 14 469 0 0 0 0 0 656 0 0 Stomatobaculum longum (SP26) 628 44 393 929 0 0 1436 0 0 621 574 0 1094 0 43 0 0 0 603 991 298 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP27) 158 7 0 1290 98 2162 188 0 0 0 617 214 199 0 0 0 43 405 26 0 0 Porphyromonas pasteri (SP28) 2 0 0 1241 25 0 0 0 0 0 0 178 0 0 2459 0 4338 415 274 0 0 Bergeyella sp._HMT_322 (SP29) 0 0 4 76 432 47 25 14 0 0 11 79 10 0 439 0 1566 71 26 176 0 Streptococcus salivarius (SP3) 25085 98926 99961 11882 23613 0 46500 28416 61875 53283 32029 45450 50003 78607 5505 69482 4146 40990 34651 45187 60054 Parascardovia denticolens (SP306) 0 0 0 23 0 0 0 0 0 12 30 0 0 19 0 0 0 0 0 0 0 Bifidobacterium scardovii (SP315) 0 0 0 0 128 0 20 1296 0 0 0 0 0 0 0 0 0 8 0 0 0 Actinomyces sp._HMT_170 (SP32) 195 0 0 9 725 0 0 14659 0 0 0 53 0 0 0 0 0 0 0 0 0 Streptococcus vestibularis (SP321) 0 0 0 234 0 0 62 0 0 263 1177 252 0 0 411 0 0 53 1425 0 172 Lactobacillus acidophilus (SP325) 0 0 0 0 0 0 0 0 0 0 19 0 0 8 0 0 0 0 0 0 15937 Gemella sanguinis (SP34) 189 167 0 3424 1666 1017 391 57 1438 610 955 478 710 0 7378 2020 3476 2020 2823 2305 0 Cardiobacterium hominis (SP341) 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 3 0 10 0 0 Haemophilus parainfluenzae (SP35) 314 4603 0 5133 32689 81 1121 21 63 0 290 3955 0 359 16404 0 17469 2549 1584 24316 12 Kingella oralis (SP357) 0 0 0 20 0 0 0 12 0 0 0 202 0 5 0 110 0 0 112 0 0 Selenomonas sp._HMT_136 (SP36) 0 0 86 15 116 0 0 0 0 208 12 23 3 0 0 0 0 13 0 9 0 Rothia mucilaginosa (SP37) 39257 21803 31932 36184 22165 82867 9779 48413 69727 25960 16906 8925 5736 31787 76446 42691 44112 18041 20578 45847 13725 Alloscardovia omnicolens (SP38) 393 0 920 53 0 0 0 0 0 913 329 0 0 0 0 0 25 219 10 0 702 Streptococcus intermedius (SP401) 101 71 0 0 0 0 0 0 0 0 0 0 115 0 0 0 0 0 0 0 0 Cutibacterium acnes (SP405) 0 97 6 6 22 0 0 9 0 0 0 19 11 109 118 24 0 0 8 31 4 Prevotella salivae (SP41) 1573 19 1135 386 165 0 1417 0 0 594 1092 24 1077 0 15 0 25 434 176 728 194 Streptococcus sp._HMT_074 (SP43) 65 0 0 1311 0 0 0 0 67 1036 845 0 71 0 10386 122 0 1846 15 2015 0 Schaalia lingnae_[Not_Validly_Published] (SP44) 1782 38 1366 1815 74 2894 862 1691 14 1081 880 214 636 0 110 14776 0 1157 787 1276 736 Capnocytophaga sputigena (SP45) 0 0 0 0 100 0 0 0 0 0 0 0 0 0 295 0 5 10 373 0 0 Veillonella atypica (SP46) 2168 395 6098 2403 1385 1611 5853 443 293 6960 7071 3094 16153 3981 770 3752 190 5153 1615 3885 7210 Veillonella parvula (SP48) 3863 5461 670 591 506 5378 219 95 104 5791 0 687 58 142 0 3190 0 164 836 1151 36 Veillonella dispar (SP49) 1921 4304 798 533 69 3958 0 104 0 56 2218 1399 5960 0 958 3362 0 3264 1078 2421 108 Streptococcus parasanguinis_clade_411 (SP5) 30867 7788 10972 4969 8315 41952 19573 2500 22617 22352 9740 5412 65 20380 8605 14326 213 12528 17387 12396 12420 Neisseria perflava (SP52) 0 0 0 2506 12960 0 0 0 0 0 0 0 40 0 0 0 7250 5301 1159 18170 0 Schaalia meyeri (SP56) 0 0 0 293 0 262 0 0 0 0 194 0 0 0 944 0 0 19 0 0 0 Schaalia odontolyticus (SP57) 8266 401 609 2746 1100 14722 8785 756 16 7606 687 667 1150 0 3477 3671 77 6921 2916 3126 2807 Prevotella jejuni (SP58) 280 0 0 52 23 0 0 0 0 228 0 0 0 0 0 0 47 0 0 0 135 Selenomonas artemidis (SP6) 0 0 0 6 36 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 Megasphaera micronuciformis (SP60) 953 63 133 136 56 0 829 0 0 769 1312 173 4951 0 81 0 9 2521 37 550 665 Mogibacterium diversum (SP61) 593 53 126 1090 57 119 0 0 0 342 377 304 21 0 0 0 52 803 67 639 0 Bifidobacterium dentium (SP62) 0 0 0 16 0 0 0 0 0 0 6 174 0 8 0 0 0 0 0 0 0 Leptotrichia hongkongensis (SP63) 0 0 0 0 0 0 0 59 0 0 0 0 11 0 0 0 0 0 1605 345 0 Abiotrophia defectiva (SP66) 0 0 0 146 0 0 0 0 0 0 0 0 0 0 143 0 0 145 2279 0 20 Ruminococcaceae_[G-2] bacterium_HMT_085 (SP7) 0 0 0 171 25 0 0 0 0 0 125 30 179 0 0 0 0 0 7 0 0 Streptococcus infantis_clade_431 (SP75) 1328 214 0 71 4735 2945 174 0 0 321 0 483 332 0 327 0 1522 0 36 0 69 Streptococcus downii (SP79) 0 0 0 9 734 0 0 0 0 0 0 62 26 0 1910 248 895 31 77 0 0 Oribacterium sinus (SP8) 0 646 1348 3141 412 1605 254 0 0 60 181 1232 293 0 0 0 207 552 395 1874 6 Campylobacter concisus (SP80) 167 196 296 350 261 0 359 0 7 234 15 776 268 0 122 810 83 529 219 1358 89 Prevotella histicola (SP82) 869 0 1672 1577 183 0 5321 175 26 1150 13954 5007 27548 0 480 3383 89 31882 1754 0 3808 Eikenella corrodens (SP83) 0 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 8 22 7 0 Leptotrichia sp._HMT_215 (SP85) 0 0 0 464 1025 0 0 0 0 0 20 157 61 0 88 0 150 132 6 846 0 Haemophilus parahaemolyticus (SP86) 0 0 0 1053 227 0 0 0 0 0 0 20 0 0 4156 0 617 0 0 0 0 Catonella morbi (SP88) 17 6 0 183 59 0 0 0 0 11 19 131 0 0 0 0 25 47 0 0 0 Prevotella pallens (SP9) 94 0 7 620 468 0 0 0 0 48 0 166 0 0 0 0 14 119 0 0 0 Prevotella melaninogenica (SP91) 4354 674 1283 9400 760 2072 0 12 0 15359 4096 630 8 0 331 0 651 2588 1414 15652 10 Streptococcus gordonii (SP92) 505 1741 0 330 5258 0 0 0 0 0 0 8629 0 6 0 0 101 0 8115 712 25 Streptococcus oralis (SP94) 149 2856 0 57 827 5 11 0 322 0 1121 29748 0 0 0 0 35 75 534 0 0 Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP95) 0 169 0 222 60 0 0 0 0 0 291 0 0 0 71 0 6 167 0 0 0 Actinomyces oris (SP96) 0 559 0 83 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0 0 Solobacterium moorei (SP98) 397 23 371 967 160 0 0 5 0 214 485 65 264 0 0 0 47 894 145 325 55 Actinomyces sp._HMT_175_nov_97.551% (SPN175) 467 0 0 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1164 0 Leptotrichia sp._HMT_215_nov_97.614% (SPN71) 0 0 0 0 292 0 0 0 0 0 0 32 0 0 0 0 67 0 0 0 0 Veillonella denticariosi_dispar_parvula (SPP1) 2349 2637 947 2843 0 3346 1430 62 33 2528 1112 1539 1817 0 525 0 0 766 1401 678 433 Lachnoanaerobaculum gingivalis_umeaense (SPP10) 0 10 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 475 36 0 0 Staphylococcus capitis_epidermidis (SPP12) 4 81 0 18 79 8 0 4 0 0 0 11 0 149 59 16 10 23 0 30 0 Oribacterium asaccharolyticum_parvum (SPP13) 0 0 0 122 89 0 0 0 0 12 30 199 18 0 0 0 49 307 84 146 5 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP15) 8149 1155 0 1676 134 4315 1799 0 2097 0 3923 356 0 0 737 0 126 3667 1073 1758 0 Afipia birgiae_broomeae (SPP21) 1208 11 0 16 19 0 13 23 0 0 6 18 0 39 0 13 0 2 0 0 0 Streptococcus sp._HMT_061_sp._HMT_066 (SPP3) 57 0 0 16 11 0 0 0 0 0 0 0 0 0 10570 0 10 53 0 651 0 Veillonella dispar_parvula (SPP33) 542 6096 178 2254 971 1044 3030 731 0 2713 652 2499 0 91 23 5193 0 8826 1256 5553 85 Streptococcus infantis_infantis_clade_638 (SPP35) 0 1132 0 742 16915 1908 2611 9 1780 6 103 420 52 18 24975 0 3506 1353 3696 1900 30 Streptococcus infantis_infantis_clade_431_infantis_clade_638 (SPP36) 0 0 0 71 1457 0 34 0 22 713 0 0 0 0 0 0 0 0 0 0 65 Streptococcus multispecies_sppn7_2_nov_97.976% (SPPN7) 4553 0 0 2068 11 0 0 0 3766 0 2524 417 5664 1623 3494 0 0 516 1053 946 0