Taxon F16728.S03 F16728.S11 F16728.S14 F5451.S05 F5451.S06 F5451.S21 F5451.S22 F5451.S27 F5451.S28 F8254.S15 F8254.S16 Leptotrichia sp._HMT_221 (SP10) 0 0 7.92262357421729 0 0 0 0 4.24849524204936 0 0 0 Capnocytophaga gingivalis (SP100) 1.6094379124341 0 0 7.06987412845857 3.3322045101752 3.17805383034795 4.29045944114839 0 0 3.89182029811063 0 Streptococcus oralis_subsp._tigurinus_clade_070 (SP101) 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp._HMT_212 (SP102) 0 0 0 0 0 0 0 0 0 5.12396397940326 4.17438726989564 Stomatobaculum sp._HMT_097 (SP106) 0 0 0 0 0 0 0 0 0 0 0 Schaalia sp._HMT_172 (SP107) 0 4.02535169073515 9.0953783535065 0 0 0 0 0 0 0 0 Parvimonas micra (SP108) 0 0 4.79579054559674 0 0 0 0 0 0 0 0 Streptococcus mitis (SP11) 7.43955930913332 4.17438726989564 6.79234442747081 5.06259503302697 2.83321334405622 0 0 4.99721227376411 0 4.77912349311153 0 Streptococcus sp._HMT_064 (SP111) 0 3.49650756146648 0 0 0 6.89365635460264 5.90808293816893 0 0 0 0 Streptococcus sp._HMT_066 (SP112) 0 9.00638651505511 0 0 0 0 0 0 0 0 0 Streptococcus sanguinis (SP113) 4.59511985013459 0 5.00394630594546 7.87359778968554 5.18178355029209 0 0 7.00397413672268 8.25088114470065 0 0 Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP115) 0 1.94591014905531 0 0 0 0 0 0 0 0 0 Streptococcus anginosus (SP117) 0 0 0 0 0 0 0 0 0 7.23273313617761 9.07486423241373 Actinomyces naeslundii (SP12) 0 0 0 0 0 4.72738781871234 6.77878489768518 0 0 0 0 Lautropia mirabilis (SP120) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus chosunense (SP121) 0 0 0 0 0 0 0 0 0 0 0 Rothia dentocariosa (SP122) 0 3.17805383034795 0 0 0 8.76358440945014 8.68980105602255 0 0 5.52545293913178 4.86753445045558 Actinomyces israelii (SP125) 0 0 0 0 0 0 0 0 0 0 0 Johnsonella sp._HMT_166 (SP127) 0 0 0 0 0 0 0 0 0 0 0 Gemella haemolysans (SP13) 2.99573227355399 0 5.99146454710798 3.87120101090789 0 0 0 4.88280192258637 0 4.59511985013459 0 Micrococcus flavus (SP130) 0 0 0 0 0 0 0 0 0 0 0 Prevotella oris (SP131) 0 1.6094379124341 0 0 0 0 0 0 0 0 0 Prevotella nanceiensis (SP136) 0 0 0 0 0 0 0 0 0 0 0 Campylobacter gracilis (SP137) 0 0 0 0 0 0 0 0 0 0 0 Fusobacterium nucleatum_subsp._animalis (SP139) 0 0 3.73766961828337 0 0 0 5.35185813347607 0 0 7.39264752072162 5.37063802812766 Lachnoanaerobaculum orale (SP14) 6.67456139181443 5.89164421182577 7.24565506759454 6.70563909486 5.52942908751142 0 0 0 0 0 0 Streptococcus sp._HMT_423 (SP140) 3.93182563272433 4.00733318523247 0 8.55814317774519 8.15679704667565 7.87321705486274 6.89467003943348 0 0 0 0 Streptococcus constellatus (SP142) 0 0 0 0 0 0 0 0 0 7.78155595923534 8.4446224985814 Streptococcus peroris (SP146) 0 2.56494935746154 0 0 0 0 0 0 0 5.79605775076537 5.23644196282995 Alloprevotella sp._HMT_308 (SP147) 3.46573590279973 5.16478597392351 0 0 0 0 0 0 0 0 0 Actinomyces graevenitzii (SP15) 2.19722457733622 1.94591014905531 8.03365842788615 0 4.58496747867057 0 0 0 0 0 0 Streptococcus sp._HMT_061 (SP150) 0 0 5.11799381241676 0 0 0 0 4.69134788222914 6.15060276844628 0 0 Streptococcus sp._HMT_056 (SP154) 0 0 0 0 0 0 4.90527477843843 0 0 0 0 Schaalia odontolytica (SP155) 0 0 0 0 0 0 0 0 0 0 0 Fusobacterium nucleatum (SP16) 0 0 4.97673374242057 0 0 0 0 0 0 0 0 Alloprevotella sp._HMT_473 (SP160) 0 0 0 0 0 0 0 0 0 0 0 Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP163) 0 0 0 0 0 0 0 0 0 0 0 Haemophilus sp._HMT_036 (SP165) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus oralis_subsp._tigurinus_clade_071 (SP166) 0 0 0 0 0 0 0 0 0 0 0 Lachnoanaerobaculum umeaense (SP169) 0 0 0 0 0 0 0 0 0 0 0 Lachnoanaerobaculum gingivalis (SP170) 5.12989871492307 5.03695260241363 0 0 0 0 0 0 0 0 0 Schaalia sp._HMT_180 (SP173) 0 0 4.0943445622221 0 0 0 5.91620206260743 5.01727983681492 6.11589212548303 8.92319149068606 8.42354163533478 Actinomyces sp._HMT_171 (SP174) 0 0 0 0 0 0 0 0 0 0 3.04452243772342 Ligilactobacillus salivarius (SP175) 0 0 5.3890717298165 0 0 0 0 0 0 0 0 Peptostreptococcus stomatis (SP178) 0 0 0 0 0 0 0 0 0 0 0 Actinomyces sp._HMT_169 (SP18) 4.61512051684126 0 0 8.41626727282628 6.77078942390898 3.61091791264422 0 0 0 0 0 Pseudoramibacter alactolyticus (SP182) 0 0 1.38629436111989 0 0 0 0 0 0 0 0 Lachnospiraceae_[G-2] bacterium_HMT_096 (SP184) 0 6.0137151560428 0 0 0 0 0 0 0 0 0 Streptococcus australis (SP185) 0 0 0 0 0 0 0 0 0 0 0 Cryptobacterium curtum (SP186) 0 0 0 0 0 0 0 0 0 0 0 Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP187) 5.40717177146012 0 2.63905732961526 0 0 0 0 0 0 0 0 Granulicatella adiacens (SP19) 8.32627478739676 7.06219163228656 8.09009578318096 8.49882553405805 7.70255611326858 4.39444915467244 4.74493212836325 5.86078622346587 5.30826769740121 3.49650756146648 2.83321334405622 Streptococcus sp._HMT_057 (SP191) 0 0 0 0 0 0 0 0 0 0 0 Neisseria flava (SP192) 0 0 0 0 0 0 0 0 0 0 0 Lancefieldella parvula (SP193) 7.31721240835984 7.32974968904151 9.05275045140141 0 0 0 0 5.04342511691925 0 4.49980967033027 0 Treponema socranskii (SP194) 0 0 1.38629436111989 0 0 0 0 0 0 0 0 Selenomonas sp._HMT_137 (SP197) 0 0 0 0 0 0 4.74493212836325 0 0 0 0 Prevotella sp._HMT_317 (SP200) 0 0 0 0 0 0 0 0 0 0 0 Lactobacillus ultunensis (SP207) 0 0 0 0 0 0 0 0 0 0 0 Gemella morbillorum (SP216) 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia wadei (SP218) 0 0 0 0 0 0 0 0 0 0 0 Propionibacterium acidifaciens (SP220) 0 0 0 0 0 0 0 0 0 0 0 Agrobacterium fabacearum (SP224) 0 0 0 0 0 0 0 0 0 0 0 Porphyromonas endodontalis (SP230) 0 0 0 0 0 0 0 0 0 0 0 Fusobacterium periodonticum (SP233) 0 0 3.09104245335832 0 0 0 0 4.99043258677874 5.76832099579377 0 0 Veillonella rogosae (SP234) 4.81218435537242 0 4.06044301054642 0 0 0 0 5.17048399503815 0 0 0 Streptococcus mutans (SP236) 0 4.33073334028633 0 0 0 5.18178355029209 5.43372200355424 0 0 0 0 Fusobacterium nucleatum_subsp._vincentii (SP238) 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp._HMT_417 (SP24) 5.50938833662798 3.55534806148941 0 6.06378520868761 6.21060007702465 0 0 0 0 8.146419323098 4.68213122712422 Sphingobium yanoikuyae (SP240) 0 0 0 2.70805020110221 0 0 0 0 0 0 0 Rothia aeria (SP241) 0 0 0 0 0 0 0 0 0 0 0 Bifidobacterium longum (SP243) 5.82894561761021 0 6.89972310728487 0 0 0 0 0 0 0 0 Campylobacter showae (SP248) 0 0 0 0 0 0 0 0 0 0 0 Capnocytophaga leadbetteri (SP25) 0 0 0 0 0 0 0 0 0 0 0 Prevotella sp._HMT_309 (SP250) 4.47733681447821 0 0 3.93182563272433 5.17614973257383 0 0 0 0 0 0 Streptococcus periodonticum (SP254) 0 0 6.1527326947041 0 0 0 0 5.0998664278242 6.53524127101366 2.484906649788 3.8286413964891 Capnocytophaga granulosa (SP257) 0 0 0 0 0 0 0 0 0 0 0 Agrobacterium tumefaciens (SP259) 0 0 0 0 0 0 0 0 0 0 0 Stomatobaculum longum (SP26) 5.97635090929793 6.43294009273918 6.9985096422506 6.45204895443723 5.96614673912369 0 0 2.89037175789616 0 6.1779441140506 0 Prevotella intermedia (SP261) 0 0 0 0 0 0 0 0 0 0 0 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP27) 0 0 5.29831736654804 0 0 0 0 0 0 0 0 Porphyromonas pasteri (SP28) 0 0 0 0 0 0 0 0 3.09104245335832 0 0 Streptococcus oralis_subsp._dentisani_clade_398 (SP280) 0 0 0 0 0 0 0 0 0 0 0 Neisseria mucosa (SP287) 0 0 0 0 0 0 0 0 0 0 0 Bergeyella sp._HMT_322 (SP29) 1.6094379124341 0 2.39789527279837 4.8283137373023 3.52636052461616 0 0 4.0943445622221 3.8286413964891 0 0 Kocuria palustris (SP292) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus salivarius (SP3) 11.5125453927519 10.8833913774714 10.8198582812105 6.87729607149743 9.024974184996 6.18620862390049 4.91265488573605 0 6.00141487796115 7.79770203551669 7.29776828253138 Neisseria flavescens (SP305) 0 2.19722457733622 0 0 0 0 0 0 0 0 0 Parascardovia denticolens (SP306) 0 2.56494935746154 0 0 0 0 0 0 0 0 0 Fretibacterium fastidiosum (SP312) 0 0 0 0 0 0 0 0 0 0 0 Rothia aerolata (SP314) 0 0 0 0 0 0 0 0 0 0 0 Bifidobacterium scardovii (SP315) 0 0 0 0 0 0 0 0 0 0 0 Actinomyces sp._HMT_170 (SP32) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus vestibularis (SP321) 0 5.57594910314632 0 0 0 0 3.43398720448515 0 0 0 0 Lactobacillus acidophilus (SP325) 0 0 0 0 0 0 0 0 0 0 0 Microbacterium hydrothermale (SP33) 0 0 0 3.66356164612965 0 0 0 0 0 0 0 Gemella sanguinis (SP34) 0 6.4150969591716 6.56667242980324 0 0 0 0 0 4.79579054559674 0 0 Cardiobacterium hominis (SP341) 0 0 0 0 0 0 0 0 0 0 0 Novosphingobium silvae (SP347) 0 0 0 0 0 0 0 0 0 0 0 Haemophilus parainfluenzae (SP35) 0 0 0 0 0 0 0 0 0 0 0 Bifidobacterium breve (SP350) 0 0 0 0 0 0 0 0 0 0 0 Kingella oralis (SP357) 0 0 0 0 0 6.22257626807137 6.12686918411419 0 0 5.61677109766657 3.98898404656427 Selenomonas sp._HMT_136 (SP36) 4.46590811865458 5.34233425196481 1.38629436111989 0 0 0 0 0 0 0 0 Bilophila wadsworthia (SP369) 0 0 0 0 0 0 0 0 0 0 0 Rothia mucilaginosa (SP37) 10.371395236823 10.1643506908774 8.65469170460187 3.97029191355212 5.08140436498446 4.14313472639153 3.55534806148941 7.99530662029082 9.11537013438496 4.74493212836325 5.14166355650266 Oribacterium sp._HMT_078 (SP370) 0 0 0 0 0 0 0 0 0 7.11314210870709 6.0330862217988 Epilithonimonas hispanica (SP373) 0 0 0 2.99573227355399 0 0 0 0 0 0 0 Streptococcus oralis_subsp._dentisani_clade_058 (SP377) 0 0 0 0 0 0 0 0 0 0 0 Alloscardovia omnicolens (SP38) 6.82546003625531 6.81783057145415 0 0 4.30406509320417 0 0 0 0 0 0 Lactobacillus crispatus (SP393) 0 0 0 0 0 0 0 0 0 0 0 Paraburkholderia fungorum (SP400) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus intermedius (SP401) 0 0 4.75359019110636 0 0 0 4.89783979995091 0 0 0 0 Cutibacterium acnes (SP405) 1.94591014905531 0 2.484906649788 0 0 0 0 0 0 0 0 Prevotella salivae (SP41) 7.0352685992811 6.38856140554563 6.98286275146894 0 3.3322045101752 0 0 0 0 0 0 Fusobacterium sp._HMT_204 (SP410) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus sp._HMT_074 (SP43) 0 6.94408720822953 4.27666611901606 0 0 0 2.63905732961526 0 0 0 3.78418963391826 Schaalia lingnae_[Not_Validly_Published] (SP44) 7.22037383672395 6.98656645940643 6.45676965557216 0 5.64544689764324 0 0 0 0 0 0 Capnocytophaga sputigena (SP45) 0 0 0 0 0 0 4.7361984483945 0 0 4.88280192258637 4.64439089914137 Veillonella atypica (SP46) 8.71588010229646 8.84807842116867 9.68992297600224 4.33073334028633 7.2991214627108 0 0 0 0 0 0 Lactobacillus kalixensis (SP47) 0 0 0 0 0 0 0 0 0 0 0 Veillonella parvula (SP48) 6.50876913697168 8.66423293406555 4.07753744390572 4.04305126783455 6.17586727010576 4.34380542185368 4.97673374242057 0 0 0 6.07764224334903 Veillonella dispar (SP49) 6.68336094576627 4.04305126783455 8.69299353121993 3.98898404656427 6.50727771238501 0 0 0 4.06044301054642 0 0 Streptococcus parasanguinis_clade_411 (SP5) 9.3031929889908 10.0147158192218 4.18965474202643 6.41673228251233 7.34148385236316 5.36129216570943 0 0 0 6.29526600143965 5.87211778947542 Neisseria perflava (SP52) 0 0 3.71357206670431 0 0 0 0 5.17048399503815 6.98100574072173 0 0 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP53) 0 0 0 0 0 0 0 0 0 0 0 Schaalia meyeri (SP56) 0 0 0 0 0 0 0 0 0 0 0 Schaalia odontolyticus (SP57) 6.41345895716736 8.9368241549973 7.04838640872188 4.7361984483945 6.36647044773144 0 2.94443897916644 0 0 0 0 Prevotella jejuni (SP58) 0 5.43372200355424 0 0 0 0 0 0 0 0 0 Selenomonas artemidis (SP6) 0 0 0 0 0 0 0 0 0 0 0 Megasphaera micronuciformis (SP60) 4.89783979995091 6.64639051484773 8.50754681436443 0 0 0 0 0 0 0 0 Mogibacterium diversum (SP61) 4.84418708645859 5.83773044716594 3.09104245335832 0 0 0 0 0 0 0 0 Bifidobacterium dentium (SP62) 0 0 0 0 0 0 0 0 0 7.27655640271871 0 Leptotrichia hongkongensis (SP63) 0 0 2.484906649788 0 0 0 0 0 0 0 0 Moraxella osloensis (SP65) 0 0 0 5.46383180502561 0 2.19722457733622 4.55387689160054 0 0 0 0 Abiotrophia defectiva (SP66) 0 0 0 0 0 0 0 0 0 0 0 Acinetobacter lwoffii (SP67) 0 0 0 0 0 0 0 0 0 0 0 Arachnia propionica (SP69) 0 0 0 0 0 0 0 0 0 0 0 Ruminococcaceae_[G-2] bacterium_HMT_085 (SP7) 0 0 5.19295685089021 0 0 0 0 0 0 0 0 Streptococcus infantis_clade_431 (SP75) 0 5.77455154554441 5.80814248998044 0 0 0 0 0 0 0 0 Acinetobacter johnsonii (SP78) 0 0 0 0 0 0 4.33073334028633 0 0 0 0 Streptococcus downii (SP79) 0 0 3.29583686600433 0 0 0 0 0 0 0 0 Oribacterium sinus (SP8) 7.20711885620776 4.11087386417331 5.68357976733868 0 0 0 0 0 0 0 0 Campylobacter concisus (SP80) 5.6937321388027 5.45958551414416 5.59471137960184 5.42934562895444 4.71849887129509 0 1.6094379124341 0 3.13549421592915 3.49650756146648 2.70805020110221 Prevotella histicola (SP82) 7.42237370098682 7.04838640872188 10.2237215162816 0 6.42324696353352 0 0 0 0 0 0 Eikenella corrodens (SP83) 0 0 0 0 0 0 4.12713438504509 0 0 0 0 Actinomyces sp._HMT_175 (SP84) 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp._HMT_215 (SP85) 0 0 4.12713438504509 0 0 0 0 5.2257466737132 5.90536184805457 0 0 Haemophilus parahaemolyticus (SP86) 0 0 0 0 0 0 0 0 0 0 0 Filifactor alocis (SP87) 0 0 0 0 0 0 0 0 0 0 0 Catonella morbi (SP88) 0 2.484906649788 0 0 0 0 0 0 0 0 0 Prevotella pallens (SP9) 2.07944154167984 3.89182029811063 0 0 0 0 0 0 0 0 0 Prevotella melaninogenica (SP91) 7.15773548424991 9.63952200670166 2.19722457733622 3.04452243772342 0 0 3.8286413964891 0 0 0 0 Streptococcus gordonii (SP92) 0 0 0 0 0 0 0 0 0 0 4.4188406077966 Streptococcus oralis (SP94) 0 0 0 0 0 4.59511985013459 0 0 0 0 0 Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP95) 0 0 0 0 0 0 0 0 0 0 0 Actinomyces oris (SP96) 0 0 0 0 0 0 0 0 0 0 0 Solobacterium moorei (SP98) 5.91889385427315 5.37063802812766 5.57972982598622 0 0 0 0 0 0 0 0 Porphyromonas gingivalis (SP99) 0 0 0 0 0 0 0 0 0 0 0 Actinomyces sp._HMT_175_nov_97.551% (SPN175) 0 0 0 0 0 0 0 0 0 0 3.17805383034795 Actinomyces graevenitzii_nov_97.737% (SPN37) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus sanguinis_nov_97.782% (SPN48) 3.52636052461616 0 0 7.03702761468628 4.4188406077966 0 0 0 0 0 0 Selenomonas sp._HMT_137_nov_97.228% (SPN60) 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia sp._HMT_215_nov_97.614% (SPN71) 0 0 0 0 0 0 0 0 0 0 0 Kingella sp._HMT_932_nov_97.955% (SPN80) 0 0 0 0 0 0 0 0 0 0 0 Veillonella denticariosi_dispar_parvula (SPP1) 6.85435450225502 7.83557924666997 7.50549227473742 4.06044301054642 6.4831073514572 0 0 0 0 0 0 Lachnoanaerobaculum gingivalis_umeaense (SPP10) 0 0 0 0 0 0 0 0 0 0 0 Staphylococcus capitis_epidermidis (SPP12) 0 0 0 0 0 0 0 0 0 0 0 Oribacterium asaccharolyticum_parvum (SPP13) 0 2.56494935746154 2.94443897916644 0 0 0 0 0 0 0 0 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP15) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus parasanguinis_parasanguinis_clade_411_parasanguinis_clade_721 (SPP16) 0 0 0 0 0 0 0 0 0 0 0 Afipia birgiae_broomeae (SPP21) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus sp._HMT_061_sp._HMT_066 (SPP3) 0 0 0 0 0 0 0 0 0 0 0 Veillonella dispar_parvula (SPP33) 5.18738580584075 7.90617884039481 0 0 0 5.22035582507832 5.63835466933375 0 0 0 6.95939851213398 Peptostreptococcaceae_[XI][G-4] bacterium_HMT_103_bacterium_HMT_369 (SPP34) 0 0 0 0 0 0 0 0 0 0 0 Streptococcus infantis_infantis_clade_638 (SPP35) 0 1.94591014905531 3.97029191355212 0 0 0 0 8.43706714693695 4.14313472639153 0 0 Streptococcus infantis_infantis_clade_431_infantis_clade_638 (SPP36) 0 6.57088296233958 0 0 0 0 0 0 0 0 0 Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP5) 0 0 0 0 0 0 0 0 0 5.83773044716594 6.14846829591765 Streptococcus multispecies_sppn7_2_nov_97.976% (SPPN7) 0 0 8.64206217346211 0 0 0 0 3.17805383034795 5.01063529409626 0 0