Taxon F16728.S01 F16728.S09 F16728.S10 F16728.S17 F16728.S19 F16728.S24 F5451.S01 F5451.S02 F5451.S17 F5451.S18 F5451.S19 F5451.S20 F8254.S01 F8254.S02 F8254.S03 F8254.S04 F8254.S07 F8254.S08 F8254.S17 F8254.S18 Capnocytophaga gingivalis (SP100) 0 4 0 766 61 183 0 0 0 209 0 0 389 1071 0 26 0 80 3629 2911 Streptococcus oralis_subsp._tigurinus_clade_070 (SP101) 0 0 271 0 0 1401 0 0 0 0 237 654 40 0 0 0 0 0 347 1189 Leptotrichia sp._HMT_212 (SP102) 0 0 7 1069 0 0 0 0 0 0 0 0 0 0 0 0 81 141 0 0 Streptococcus mitis (SP11) 2303 11519 1249 5244 19761 11305 28 7 12 20 265 127 0 0 720 477 4762 11134 47 1070 Streptococcus sp._HMT_064 (SP111) 0 161 0 4037 0 0 26 15 0 43 0 0 0 0 1054 921 0 0 0 0 Streptococcus sp._HMT_066 (SP112) 5607 0 0 0 7045 684 17 0 0 0 0 0 0 0 0 0 3 67 0 0 Streptococcus sanguinis (SP113) 0 6619 0 348 77 1150 0 0 0 298 0 0 2112 5866 1788 319 437 1020 100 75 Streptococcus anginosus (SP117) 0 11608 0 0 0 0 0 0 5513 0 0 0 0 0 0 0 0 0 0 0 Actinomyces naeslundii (SP12) 0 0 0 0 0 0 0 0 0 0 0 0 391 1392 0 0 0 14 0 0 Lautropia mirabilis (SP120) 0 0 0 0 65 0 0 0 0 0 0 0 105 1105 0 0 246 1171 0 0 Rothia dentocariosa (SP122) 111 3530 0 0 10 994 143 551 1018 346 0 0 623 537 0 0 0 0 0 51 Gemella haemolysans (SP13) 223 2936 33 7648 2650 688 6 0 0 0 0 0 0 0 878 240 837 1855 0 26 Micrococcus flavus (SP130) 0 0 0 0 0 0 0 0 34 0 633 481 0 0 0 0 0 0 0 0 Prevotella nanceiensis (SP136) 3 0 0 0 564 1214 89 46 0 0 0 0 0 0 0 0 0 0 0 0 Campylobacter gracilis (SP137) 36 3 0 0 0 8 341 1205 0 80 0 0 59 0 0 0 0 0 94 835 Fusobacterium nucleatum_subsp._animalis (SP139) 82 0 0 0 0 0 2583 3065 0 0 0 0 0 0 0 0 0 0 0 0 Lachnoanaerobaculum orale (SP14) 776 0 0 130 0 1380 0 29 0 0 0 0 0 0 0 0 0 14 0 0 Streptococcus sp._HMT_423 (SP140) 8 22053 0 0 77 184 5 9 0 476 0 0 721 218 409 128 1659 109 292 1954 Alloprevotella sp._HMT_308 (SP147) 0 7 0 61 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actinomyces graevenitzii (SP15) 2509 1799 0 703 0 18 0 0 139 85 0 0 0 0 0 0 0 0 0 0 Streptococcus sp._HMT_056 (SP154) 0 0 0 0 0 0 0 0 0 0 0 0 857 222 0 0 0 0 0 0 Schaalia odontolytica (SP155) 3231 15 0 0 0 199 860 894 0 0 0 0 0 132 0 0 0 0 1115 118 Fusobacterium nucleatum (SP16) 26 41 0 973 12 34 411 633 0 322 0 0 757 2081 0 0 309 612 5092 2057 Alloprevotella sp._HMT_473 (SP160) 0 0 0 0 521 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 Lachnoanaerobaculum umeaense (SP169) 0 0 0 0 45 0 147 141 0 0 0 0 0 0 0 0 0 0 0 0 Lachnoanaerobaculum gingivalis (SP170) 0 0 0 165 119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Schaalia sp._HMT_180 (SP173) 651 0 0 13 0 0 0 0 0 0 0 0 5411 564 0 0 0 0 0 0 Actinomyces sp._HMT_169 (SP18) 0 0 0 50 0 2316 0 0 0 0 0 64 327 145 256 31 0 0 3286 7632 Streptococcus australis (SP185) 941 0 0 0 20150 0 0 0 0 0 0 0 0 0 0 0 23 167 0 0 Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP187) 89 0 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Granulicatella adiacens (SP19) 5759 1017 2724 11213 3890 7292 536 436 0 530 0 0 135 252 0 0 141 358 343 513 Neisseria flava (SP192) 0 8 0 0 98 0 0 0 0 750 0 0 0 0 0 0 59 770 0 0 Lancefieldella parvula (SP193) 1462 34 11 40 112 2447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia wadei (SP218) 26 0 0 0 0 0 445 685 0 0 0 0 3155 79 0 0 0 0 0 0 Fusobacterium periodonticum (SP233) 160 0 0 2180 1476 2276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Veillonella rogosae (SP234) 253 0 0 0 9721 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 Sphingobium yanoikuyae (SP240) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1018 1996 0 0 0 0 Rothia aeria (SP241) 0 0 0 0 23 0 0 0 0 0 0 0 2961 2934 0 0 43 41 0 0 Bifidobacterium longum (SP243) 587 0 0 24 0 92 0 24 0 0 0 0 0 0 0 0 0 0 0 0 Campylobacter showae (SP248) 0 0 0 0 16 0 0 0 0 0 0 0 0 0 0 0 29 60 403 101 Capnocytophaga leadbetteri (SP25) 0 0 0 0 50 18 0 0 0 0 0 0 0 0 0 0 0 59 2098 166 Prevotella sp._HMT_309 (SP250) 13 0 0 0 0 0 96 117 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus periodonticum (SP254) 5796 0 357 0 0 0 0 0 0 0 34 0 0 0 0 0 0 0 0 0 Capnocytophaga granulosa (SP257) 0 0 0 70 0 0 0 0 0 0 0 0 183 351 0 0 7 13 0 0 Agrobacterium tumefaciens (SP259) 0 0 0 0 0 0 0 0 0 35 443 114 0 0 230 544 0 0 0 0 Stomatobaculum longum (SP26) 628 0 0 43 0 991 0 5 0 0 0 0 0 0 0 0 0 0 0 0 Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP27) 158 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Porphyromonas pasteri (SP28) 2 0 0 2459 4338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Neisseria mucosa (SP287) 0 0 0 0 0 0 0 0 0 975 0 0 1381 1413 0 0 0 0 0 0 Bergeyella sp._HMT_322 (SP29) 0 14 0 439 1566 176 0 0 0 37 0 0 0 11 0 0 121 328 0 32 Kocuria palustris (SP292) 0 0 0 0 0 0 0 0 0 0 293 207 0 0 0 0 0 0 0 0 Streptococcus salivarius (SP3) 25085 28416 61875 5505 4146 45187 0 0 134 0 8445 4784 621 2477 0 300 0 20 0 0 Bifidobacterium scardovii (SP315) 0 1296 0 0 0 0 0 0 2029 36 0 0 0 0 0 0 0 0 0 0 Actinomyces sp._HMT_170 (SP32) 195 14659 0 0 0 0 1381 1201 41 232 0 0 0 0 0 0 0 0 0 0 Microbacterium hydrothermale (SP33) 0 0 0 0 0 0 0 0 0 0 0 59 0 0 708 1707 0 0 0 0 Gemella sanguinis (SP34) 189 57 1438 7378 3476 2305 24 0 0 0 0 6 0 0 0 85 0 0 0 0 Cardiobacterium hominis (SP341) 0 0 0 0 3 0 0 0 0 0 0 0 222 603 0 0 34 35 0 0 Novosphingobium silvae (SP347) 0 0 0 0 0 0 0 0 61 90 1156 277 0 0 0 0 0 0 0 0 Haemophilus parainfluenzae (SP35) 314 21 63 16404 17469 24316 0 0 0 0 0 0 43 194 1066 191 212 619 32 37 Kingella oralis (SP357) 0 12 0 0 0 0 0 0 19 195 0 0 232 99 0 0 0 0 0 0 Selenomonas sp._HMT_136 (SP36) 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 0 88 54 Rothia mucilaginosa (SP37) 39257 48413 69727 76446 44112 45847 0 0 0 0 1575 954 39 107 10249 1761 0 439 0 0 Epilithonimonas hispanica (SP373) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 692 3301 0 0 0 0 Alloscardovia omnicolens (SP38) 393 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Lactobacillus crispatus (SP393) 0 214 0 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 Paraburkholderia fungorum (SP400) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 219 391 0 0 0 0 Streptococcus intermedius (SP401) 101 0 0 0 0 0 1432 2232 0 0 0 0 0 0 0 0 216 197 0 0 Cutibacterium acnes (SP405) 0 9 0 118 0 31 0 0 0 0 36 40 0 0 0 12 0 0 0 0 Prevotella salivae (SP41) 1573 0 0 15 25 728 180 135 50 0 0 0 0 0 0 0 0 0 4 0 Fusobacterium sp._HMT_204 (SP410) 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 0 0 0 1383 621 Streptococcus sp._HMT_074 (SP43) 65 0 67 10386 0 2015 0 0 0 0 0 0 0 0 33 0 0 0 0 0 Schaalia lingnae_[Not_Validly_Published] (SP44) 1782 1691 14 110 0 1276 0 0 1329 133 0 0 0 0 0 0 0 0 0 0 Capnocytophaga sputigena (SP45) 0 0 0 295 5 0 0 0 0 0 0 0 253 1033 0 0 13 49 0 0 Veillonella atypica (SP46) 2168 443 293 770 190 3885 0 43 131 0 0 0 214 0 0 0 0 0 0 0 Veillonella parvula (SP48) 3863 95 104 0 0 1151 1223 1413 95 1322 306 703 227 56 0 0 0 0 148 278 Veillonella dispar (SP49) 1921 104 0 958 0 2421 1103 1283 0 0 0 0 4 0 0 0 0 0 0 0 Streptococcus parasanguinis_clade_411 (SP5) 30867 2500 22617 8605 213 12396 96 0 77 0 595 618 219 268 0 0 0 0 0 0 Neisseria perflava (SP52) 0 0 0 0 7250 18170 0 0 0 0 0 0 0 0 0 0 0 54 0 0 Ruminococcaceae_[G-1] bacterium_HMT_075 (SP53) 0 0 0 0 0 0 0 0 0 0 0 0 610 17 0 0 0 0 0 0 Schaalia odontolyticus (SP57) 8266 756 16 3477 77 3126 0 0 0 1367 0 0 0 0 0 64 0 0 0 0 Prevotella jejuni (SP58) 280 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Megasphaera micronuciformis (SP60) 953 0 0 81 9 550 243 248 0 0 0 0 0 0 0 0 0 0 0 0 Mogibacterium diversum (SP61) 593 0 0 0 52 639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Leptotrichia hongkongensis (SP63) 0 59 0 0 0 345 0 0 9 388 0 0 269 1271 0 0 0 0 184 1515 Moraxella osloensis (SP65) 0 0 0 0 0 0 34 0 78 126 2398 1471 6 0 5954 25919 0 0 6 18 Abiotrophia defectiva (SP66) 0 0 0 143 0 0 0 0 0 0 0 0 0 0 1774 249 0 0 0 0 Acinetobacter lwoffii (SP67) 0 0 0 0 0 0 0 9 0 0 0 134 13 0 20 0 0 0 0 24 Streptococcus infantis_clade_431 (SP75) 1328 0 0 327 1522 0 0 0 0 0 0 0 0 0 0 0 0 19 0 0 Acinetobacter johnsonii (SP78) 0 0 0 0 0 0 0 0 0 65 1142 606 0 7 14 453 0 13 0 0 Streptococcus downii (SP79) 0 0 0 1910 895 0 0 0 0 0 0 0 0 0 159 63 0 11 0 0 Oribacterium sinus (SP8) 0 0 0 0 207 1874 0 0 0 0 0 0 0 0 0 0 0 0 41 0 Campylobacter concisus (SP80) 167 0 7 122 83 1358 47 82 0 10 0 0 0 0 0 0 0 0 0 0 Prevotella histicola (SP82) 869 175 26 480 89 0 0 0 373 132 0 0 0 0 0 0 0 0 0 0 Eikenella corrodens (SP83) 0 0 0 0 0 7 0 0 0 0 0 0 447 310 0 0 0 14 1078 254 Leptotrichia sp._HMT_215 (SP85) 0 0 0 88 150 846 377 458 0 0 0 0 0 0 0 0 0 0 0 111 Haemophilus parahaemolyticus (SP86) 0 0 0 4156 617 0 0 0 0 0 0 0 0 0 868 86 357 1304 0 0 Catonella morbi (SP88) 17 0 0 0 25 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 Prevotella pallens (SP9) 94 0 0 0 14 0 260 300 0 0 0 0 0 0 0 0 0 0 0 0 Prevotella melaninogenica (SP91) 4354 12 0 331 651 15652 0 0 0 0 0 0 9 0 0 0 5 0 0 0 Streptococcus gordonii (SP92) 505 0 0 0 101 712 3432 4411 0 0 0 0 0 0 138 0 2667 113 341 125 Streptococcus oralis (SP94) 149 0 322 0 35 0 265 309 0 0 0 0 0 0 0 0 306 0 0 0 Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP95) 0 0 0 71 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actinomyces oris (SP96) 0 0 0 0 28 0 0 0 0 0 0 0 0 0 0 0 538 317 0 0 Solobacterium moorei (SP98) 397 5 0 0 47 325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Actinomyces sp._HMT_175_nov_97.551% (SPN175) 467 0 0 0 0 1164 3735 2980 0 0 0 0 0 0 0 0 0 0 1539 3493 Veillonella denticariosi_dispar_parvula (SPP1) 2349 62 33 525 0 678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Staphylococcus capitis_epidermidis (SPP12) 4 4 0 59 10 30 0 0 0 0 0 0 0 0 0 93 0 0 0 0 Oribacterium asaccharolyticum_parvum (SPP13) 0 0 0 0 49 146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP15) 8149 0 2097 737 126 1758 0 0 0 0 330 0 0 0 0 0 0 0 0 0 Afipia birgiae_broomeae (SPP21) 1208 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Streptococcus sp._HMT_061_sp._HMT_066 (SPP3) 57 0 0 10570 10 651 0 0 0 0 0 0 0 0 17 371 0 0 0 0 Veillonella dispar_parvula (SPP33) 542 731 0 23 0 5553 2487 2744 3075 5131 377 366 866 343 0 0 124 0 418 804 Streptococcus infantis_infantis_clade_638 (SPP35) 0 9 1780 24975 3506 1900 0 0 515 0 41 7 0 0 300 480 0 21 0 0 Streptococcus multispecies_sppn7_2_nov_97.976% (SPPN7) 4553 0 3766 3494 0 946 0 0 0 0 203 36 0 0 0 0 0 0 0 7