QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Streptococcus sp. HMT423 (SP298) 294
Stenotrophomonas maltophilia (SP2) 294
Shuttleworthia satelles (SP136) 294
Gemella haemolysans (SP124) 294
Bergeyella zoohelcum_nov_92.593% (SPN105) 294
multigenus multispecies_spp11_2 (SPP11) 294
Aggregatibacter sp. HMT512 (SP127) 294
Leptotrichia sp. HMT417 (SP141) 294
Phocaeicola abscessus (SP198) 294
Peptidiphaga sp. HMT183 (SP98) 294
Streptococcus mitis (SP97) 294
Prevotella histicola (SP96) 294
Fusobacterium nucleatum_subsp._animalis (SP209) 294
Scardovia wiggsiae (SP227) 294
Streptococcus chosunense (SP81) 294
Klebsiella aerogenes (SP70) 294
Klebsiella michiganensis (SP142) 294
Fusobacterium multispecies_spp13_2 (SPP13) 293
Dialister pneumosintes (SP345) 293
Enterobacter cloacae (SP16) 293
Streptococcus mutans (SP248) 293
Absconditabacteria_(SR1)_[G-1] bacterium HMT345 (SP15) 293
Cardiobacterium hominis_nov_88.719% (SPN374) 293
Fusobacterium hwasookii (SP193) 292
Bacteroidetes_[G-3] bacterium HMT280 (SP155) 292
Streptococcus cristatus_clade_578 (SP363) 292
Peptostreptococcaceae_[XI][G-7] bacterium HMT081 (SP128) 292
Absconditabacteria_(SR1)_[G-1] bacterium HMT345 nov_97.934% (SPN235) 292
Neisseria subflava (SP106) 292
Streptococcus oralis_subsp._tigurinus_clade_071 (SP121) 292
Selenomonas sputigena (SP57) 292
Streptococcus cristatus (SP89) 291
Desulfovibrio legallii_nov_94.343% (SPN40) 291
Prevotella baroniae (SP375) 291
Bacteroidaceae_[G-1] bacterium HMT272 (SP364) 291
Veillonella dispar (SP60) 291
Haemophilus sputorum (SP278) 291
Streptococcus sanguinis (SP31) 290
Selenomonas sp. HMT936 nov_97.030% (SPN439) 290
Solobacterium moorei (SP27) 290
Prevotella nanceiensis_nov_91.353% (SPN39) 290
Propionibacterium acidifaciens (SP6) 290
Bergeyella sp. HMT322 (SP64) 289
Mogibacterium diversum (SP66) 289
Bifidobacterium dentium (SP401) 289
Peptostreptococcus stomatis (SP110) 288
Bulleidia extructa (SP294) 288
Campylobacter showae (SP55) 288
Tannerella forsythia_nov_97.308% (SPN427) 288
Parvimonas sp. HMT393 (SP302) 287
Megasphaera micronuciformis (SP267) 287
Capnocytophaga gingivalis_nov_96.218% (SPN451) 287
Porphyromonas gingivalis (SP380) 287
Peptoanaerobacter [Eubacterium] yurii (SP146) 287
Peptoniphilus lacrimalis (SP301) 286
Megasphaera sp. HMT123 (SP268) 285
Streptococcus oralis_subsp._tigurinus_clade_070 (SP33) 285
Selenomonas sp. HMT892 nov_97.041% (SPN28) 285
Corynebacterium matruchotii (SP100) 284
Rothia dentocariosa (SP78) 284
Aggregatibacter segnis (SP252) 283
Saccharibacteria_(TM7)_[G-4] bacterium HMT355 (SP216) 283
Prevotella veroralis (SP223) 283
Leptotrichia sp. HMT219 (SP240) 282
Peptostreptococcaceae_[XI][G-2] bacterium HMT091 (SP173) 282
Prevotella sp. HMT305 nov_93.661% (SPN371) 282
Peptostreptococcaceae_[XI][G-4] bacterium HMT369 (SP296) 282
Bacteroidetes_[G-3] bacterium HMT436 (SP389) 282
Selenomonas sp. HMT442 (SP376) 282
Lachnoanaerobaculum gingivalis (SP262) 282
Fusobacterium nucleatum (SP62) 281
Lachnoanaerobaculum sp. HMT083 (SP259) 281
Prevotella marshii (SP135) 281
Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP47) 281
Prevotella buccae (SP163) 281
Treponema vincentii (SP276) 281
Prevotella intermedia (SP23) 281
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP144) 281
Streptococcus anginosus (SP43) 280
Granulicatella adiacens (SP48) 280
Neisseria sp. HMT020 (SP45) 280
Kingella denitrificans (SP367) 280
Ottowia sp. HMT894 nov_96.988% (SPN120) 280
Neisseria flavescens (SP164) 280
Prevotella sp. HMT304 (SP344) 280
Ruminococcaceae_[G-2] bacterium HMT085 (SP120) 280
Selenomonas dianae (SP354) 279
Streptococcus oralis (SP112) 279
Filifactor alocis (SP69) 279
Bergeyella sp. HMT907 (SP283) 279
Selenomonas sp. HMT146 (SP239) 279
Neisseria flava (SP80) 279
Dialister micraerophilus (SP355) 278
Bacteroides heparinolyticus (SP280) 278
Selenomonas sp. HMT137 nov_97.137% (SPN267) 278
Lachnospiraceae_[G-8] bacterium HMT500 (SP21) 278
Bacteroidetes_[G-7] bacterium HMT911 (SP161) 277
Treponema sp. HMT270 (SP115) 277
Bacteroidales_[G-2] bacterium HMT274 (SP35) 275
Catonella morbi (SP26) 275
Campylobacter rectus (SP293) 275
Peptostreptococcaceae_[XI][G-4] bacterium HMT103 (SP231) 275
Porphyromonas sp. HMT284 (SP229) 274
Streptococcus salivarius (SP37) 274
Actinomyces naeslundii (SP61) 274
Capnocytophaga sp. HMT326 (SP343) 274
Selenomonas sp. HMT892 (SP68) 274
Capnocytophaga gingivalis_nov_90.756% (SPN339) 274
Tannerella multispecies_spp4_2 (SPP4) 273
Erysipelotrichaceae_[G-1] bacterium HMT905 (SP74) 273
Prevotella oralis (SP243) 273
Prevotella saccharolytica (SP94) 273
Prevotella sp. HMT314 (SP201) 273
Prevotella maculosa (SP87) 272
Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP108) 272
Porphyromonas endodontalis (SP32) 271
Saccharibacteria_(TM7)_[G-8] bacterium HMT955 (SP167) 270
Parvimonas micra (SP12) 270
Fusobacterium sp. HMT370 (SP118) 270
Treponema socranskii (SP39) 270
Veillonella atypica (SP114) 270
Prevotella melaninogenica (SP50) 269
Arachnia propionica (SP76) 269
Selenomonas noxia (SP63) 269
Treponema maltophilum (SP58) 268
Streptococcus sp. HMT064 (SP91) 268
Campylobacter gracilis (SP179) 268
Streptococcus oralis_subsp._dentisani_clade_058 (SP129) 267
Corynebacterium matruchotii_nov_97.951% (SPN404) 267
Veillonella rogosae (SP162) 266
Leptotrichia sp. HMT221 (SP152) 265
Fusobacterium nucleatum_subsp._vincentii (SP153) 265
Gemella morbillorum (SP207) 265
Neisseria elongata (SP42) 265
Leptotrichia sp. HMT392 (SP4) 264
Veillonella multispecies_spp25_2 (SPP25) 264
Capnocytophaga haemolytica (SP132) 264
Olsenella sp. HMT807 (SP119) 263
Veillonella parvula (SP38) 263
Leptotrichia hongkongensis (SP130) 263
Lancefieldella parvula (SP275) 263
Bacteroidetes_[G-5] bacterium HMT511 (SP273) 263
Treponema denticola (SP157) 262
Peptidiphaga gingivicola (SP196) 262
Neisseria sicca (SP36) 261
Tannerella forsythia (SP184) 261
Leptotrichia sp. HMT215 (SP191) 261
Prevotella sp. HMT292 (SP154) 260
Fusobacterium sp. HMT204 (SP228) 260
Veillonellaceae_[G-1] bacterium HMT155 (SP168) 259
Peptidiphaga gingivicola_nov_96.920% (SPN213) 259
Rothia aeria (SP208) 259
Prevotella sp. HMT300 nov_97.638% (SPN9) 259
Corynebacterium durum (SP211) 257
Tannerella sp. HMT286 (SP11) 257
Peptostreptococcaceae_[XI][G-4] multispecies_spp14_2 (SPP14) 257
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP258) 257
Streptococcus gordonii (SP3) 256
Alloprevotella rava (SP310) 256
Leptotrichia sp. HMT212 (SP71) 256
Actinomyces sp. HMT171 (SP93) 255
Selenomonas sp. HMT138 (SP210) 255
Neisseria bacilliformis (SP365) 253
Alloprevotella sp. HMT473 (SP224) 251
Selenomonas sp. HMT137 (SP232) 251
Arachnia rubra (SP337) 251
Prevotella salivae (SP170) 250
Treponema sp. HMT247 (SP328) 250
Prevotella micans (SP330) 249
Slackia exigua (SP250) 249
Selenomonas infelix (SP30) 249
Absconditabacteria_(SR1)_[G-1] bacterium HMT874 (SP304) 249
Actinomyces timonensis (SP236) 248
Treponema sp. HMT237 (SP192) 248
Capnocytophaga sp. HMT332 (SP171) 247
Lachnoanaerobaculum orale (SP40) 247
Leptotrichia sp. HMT498 (SP147) 247
Leptotrichia hofstadii (SP67) 247
Cardiobacterium hominis (SP101) 247
Capnocytophaga gingivalis (SP14) 246
Prevotella multispecies_spp9_2 (SPP9) 246
Stomatobaculum longum (SP181) 245
Streptococcus sanguinis_nov_97.782% (SPN146) 244
Prevotella sp. HMT301 (SP219) 243
Leptotrichia wadei (SP188) 242
Capnocytophaga leadbetteri (SP13) 242
Saccharibacteria_(TM7)_[G-1] bacterium HMT869 (SP274) 242
Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP159) 241
Saccharibacteria_(TM7)_[G-5] bacterium HMT356 (SP182) 240
Prevotella pleuritidis (SP99) 240
Mogibacterium timidum (SP126) 240
Selenomonas artemidis (SP125) 239
Actinomyces sp. HMT171 nov_96.929% (SPN416) 239
Leptotrichia sp. HMT223 (SP379) 238
Corynebacterium durum_nov_97.787% (SPN18) 238
Actinomyces massiliensis (SP177) 238
Aggregatibacter sp. HMT898 (SP205) 238
Leptotrichia trevisanii (SP156) 238
Actinomyces sp. HMT170 (SP107) 237
Treponema lecithinolyticum (SP305) 236
Schaalia sp. HMT877 (SP271) 236
Selenomonas noxia_nov_97.446% (SPN49) 236
Selenomonas flueggei (SP264) 235
Johnsonella ignava (SP419) 234
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 nov_92.871% (SPN359) 233
Gracilibacteria_(GN02)_[G-1] bacterium HMT872 (SP41) 233
Porphyromonas catoniae (SP1) 233
Oribacterium sinus (SP261) 233
Cryptobacterium curtum (SP213) 232
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 (SP178) 232
Haemophilus parahaemolyticus (SP24) 232
Prevotella sp. HMT300 (SP25) 232
Aggregatibacter sp. HMT458 (SP72) 230
Porphyromonas pasteri (SP46) 230
Fretibacterium sp. HMT360 (SP5) 230
Actinomyces sp. HMT169 (SP73) 230
Actinomyces sp. HMT175 (SP34) 229
Ruminococcaceae_[G-1] bacterium HMT075 (SP286) 228
Eikenella corrodens (SP9) 228
Neisseria mucosa (SP282) 228
Capnocytophaga endodontalis (SP140) 227
Anaerolineae_[G-1] bacterium HMT439 (SP220) 226
Streptococcus multispecies_spp1_2 (SPP1) 226
Porphyromonas sp. HMT275 (SP52) 225
Streptococcus intermedius (SP54) 225
Capnocytophaga granulosa (SP266) 224
Kingella oralis (SP237) 224
Campylobacter concisus (SP249) 224
Centipeda periodontii_nov_97.436% (SPN383) 224
Actinomyces sp. HMT448 (SP254) 224
Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP215) 224
Tannerella serpentiformis (SP116) 222
Dialister invisus (SP187) 222
Mycoplasma salivarium (SP308) 221
Download table as TSV

Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Gingivitis profile 1 Day 0 Gingivitis profile 1 Day 0 Gingivitis profile 1 Day 0 Gingivitis profile 1 Day 0 Gingivitis profile 1 Day 0 Gingivitis profile 1 day 7 (UR+MR+LR) Gingivitis profile 1 day 7 (UR+MR+LR) Gingivitis profile 1 day 7 (UR+MR+LR) Gingivitis profile 1 day 7 (UR+MR+LR) Gingivitis profile 1 day 7 (UR+MR+LR) Gingivitis profile 2 day 0 Gingivitis profile 2 day 0 Gingivitis profile 2 day 0 Gingivitis profile 2 day 0 Gingivitis profile 2 day 0 Gingivitis profile 2 day 7 (UR+MR+LR) Gingivitis profile 2 day 7 (UR+MR+LR) Gingivitis profile 2 day 7 (UR+MR+LR) Gingivitis profile 2 day 7 (UR+MR+LR) Gingivitis profile 2 day 7 (UR+MR+LR)
Streptococcus sp. HMT423 (SP298) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 1233.0 1576.0 1878.0 1887.0 2075.0 298.0 624.5 1207.0 1584.0 2492.0
Stenotrophomonas maltophilia (SP2) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3989.0 9098.0 13911.0 17986.0 32868.0
Shuttleworthia satelles (SP136) 1.0 41.0 75.0 80.0 86.0 14.0 27.0 74.0 92.5 151.0 12.0 16.0 16.0 20.0 44.0 1.0 1.0 1.0 1.0 1.0
Gemella haemolysans (SP124) 84.0 90.0 137.0 148.0 173.0 1.0 1.0 1.0 1.0 1.0 27.0 32.0 39.0 43.0 77.0 8.0 16.0 31.0 33.5 87.0
Bergeyella zoohelcum_nov_92.593% (SPN105) 294.0 335.0 417.0 440.0 660.0 117.0 424.0 630.0 1154.0 11945.0 1.0 1.0 1.0 9.0 11.0 172.0 492.5 1156.0 3471.5 7833.0
multigenus multispecies_spp11_2 (SPP11) 1.0 1.0 1.0 1.0 1.0 80.0 390.0 1020.0 1745.5 7781.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Aggregatibacter sp. HMT512 (SP127) 1.0 1.0 1.0 1.0 1.0 1.0 35.0 86.0 300.5 923.0 17.0 21.0 24.0 30.0 30.0 535.0 1210.5 1648.0 2253.0 3568.0
Leptotrichia sp. HMT417 (SP141) 180.0 266.0 266.0 285.0 692.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Phocaeicola abscessus (SP198) 1.0 28.0 56.0 76.0 135.0 157.0 415.5 675.0 969.5 1240.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Peptidiphaga sp. HMT183 (SP98) 1506.0 1894.0 2372.0 2678.0 4344.0 1.0 1.0 1.0 1.0 1.0 321.0 333.0 366.0 371.0 384.0 1.0 1.0 1.0 1.0 1.0
Streptococcus mitis (SP97) 1535.0 2012.0 2299.0 2457.0 3643.0 4861.0 6237.5 8828.0 11163.0 15296.0 57.0 105.0 116.0 130.0 165.0 1.0 1.0 1.0 1.0 1.0
Prevotella histicola (SP96) 393.0 406.0 406.0 466.0 834.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum_subsp._animalis (SP209) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 210.0 269.0 325.0 406.0 417.0 183.0 337.5 488.0 595.5 783.0
Scardovia wiggsiae (SP227) 613.0 771.0 818.0 891.0 1494.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 9.0 1.0 1.0 1.0 1.0 1.0
Streptococcus chosunense (SP81) 111.0 225.0 373.0 387.0 509.0 514.0 712.5 976.0 1295.0 1881.0 203.0 216.0 246.0 300.0 312.0 1.0 1.0 1.0 1.0 1.0
Klebsiella aerogenes (SP70) 1.0 1.0 1.0 1.0 1.0 2022.0 22015.5 42663.0 66982.5 115349.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Klebsiella michiganensis (SP142) 1.0 1.0 1.0 1.0 1.0 631.0 1719.5 4711.0 8387.0 37223.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_spp13_2 (SPP13) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 193.0 216.0 273.0 315.0 318.0 283.0 491.0 778.0 932.5 1153.0
Dialister pneumosintes (SP345) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 207.0 224.0 237.0 244.0 329.0 214.0 454.5 1224.0 1806.5 2935.0
Enterobacter cloacae (SP16) 1.0 1.0 1.0 1.0 1.0 81.0 337.5 888.0 1527.0 6912.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus mutans (SP248) 104.0 126.0 217.0 289.0 424.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.0 3.0 1.0 1.0 1.0 1.0 1.0
Absconditabacteria_(SR1)_[G-1] bacterium HMT345 (SP15) 51.0 65.0 73.0 74.0 148.0 472.0 938.0 1933.0 2260.5 3039.0 1.0 1.0 25.0 25.0 39.0 173.0 508.5 741.0 1365.0 1853.0
Cardiobacterium hominis_nov_88.719% (SPN374) 118.0 142.0 162.0 170.0 190.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium hwasookii (SP193) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 149.0 159.0 239.0 275.0 320.0 56.0 108.0 124.0 145.5 271.0
Bacteroidetes_[G-3] bacterium HMT280 (SP155) 1.0 1.0 1.0 1.0 10.0 140.0 303.5 488.0 618.0 840.0 7.0 8.0 10.0 12.0 13.0 81.0 139.0 174.0 260.0 538.0
Streptococcus cristatus_clade_578 (SP363) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 3.0 104.0 114.0 133.0 247.0 288.0 48.0 83.0 141.0 202.5 374.0
Peptostreptococcaceae_[XI][G-7] bacterium HMT081 (SP128) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 50.5 117.0 1.0 49.0 50.0 56.0 76.0 821.0 1669.5 2164.0 4262.0 5225.0
Absconditabacteria_(SR1)_[G-1] bacterium HMT345 nov_97.934% (SPN235) 1.0 1.0 1.0 1.0 1.0 208.0 278.0 407.0 651.0 1149.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Neisseria subflava (SP106) 158.0 225.0 225.0 263.0 321.0 29.0 121.0 231.0 321.5 1006.0 17.0 58.0 58.0 61.0 62.0 533.0 739.0 1016.0 1688.0 6108.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP121) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 65.0 158.0 269.0 336.5 699.0
Selenomonas sputigena (SP57) 283.0 511.0 617.0 628.0 658.0 1.0 29.0 53.0 65.0 121.0 78.0 83.0 88.0 93.0 95.0 1.0 1.0 1.0 1.0 1.0
Streptococcus cristatus (SP89) 611.0 615.0 738.0 821.0 1091.0 1275.0 2547.5 2814.0 3477.5 4016.0 1.0 17.0 25.0 41.0 101.0 1.0 7.0 18.0 38.0 60.0
Desulfovibrio legallii_nov_94.343% (SPN40) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 19.0 23.0 25.0 31.0 35.0 14.0 37.5 62.0 95.0 140.0
Prevotella baroniae (SP375) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 95.0 1.0 1.0 1.0 11.0 13.0 109.0 206.0 291.0 399.5 568.0
Bacteroidaceae_[G-1] bacterium HMT272 (SP364) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 18.0 23.0 25.0 38.0 57.0 8.0 30.5 46.0 83.0 174.0
Veillonella dispar (SP60) 1.0 1.0 1.0 1.0 6.0 1.0 1.0 1.0 1.0 1.0 15.0 17.0 24.0 35.0 37.0 28.0 65.0 121.0 254.5 658.0
Haemophilus sputorum (SP278) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 17.0 1.0 1.0 1.0 1.0 22.0 15.0 29.0 71.0 135.0 479.0
Streptococcus sanguinis (SP31) 167.0 231.0 362.0 382.0 542.0 1.0 1.0 1.0 9.0 87.0 449.0 666.0 694.0 818.0 836.0 14.0 54.0 69.0 132.5 240.0
Selenomonas sp. HMT936 nov_97.030% (SPN439) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 43.0 59.0 61.0 64.0 74.0 1.0 9.5 14.0 22.5 37.0
Solobacterium moorei (SP27) 65.0 100.0 110.0 119.0 162.0 971.0 2521.0 3347.0 4027.0 6041.0 99.0 120.0 121.0 121.0 135.0 1483.0 2718.0 3414.0 3622.0 5578.0
Prevotella nanceiensis_nov_91.353% (SPN39) 51.0 65.0 70.0 108.0 139.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Propionibacterium acidifaciens (SP6) 54.0 63.0 72.0 85.0 102.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Bergeyella sp. HMT322 (SP64) 55.0 126.0 140.0 175.0 302.0 1.0 1.0 1.0 1.0 1.0 236.0 262.0 392.0 451.0 461.0 1.0 9.0 11.0 16.0 26.0
Mogibacterium diversum (SP66) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 108.0 110.0 126.0 160.0 176.0 1.0 1.0 1.0 1.0 1.0
Bifidobacterium dentium (SP401) 1.0 1.0 1.0 1.0 21.0 1.0 1.0 1.0 1.0 1.0 110.0 134.0 140.0 205.0 216.0 1.0 1.0 1.0 1.0 3.0
Peptostreptococcus stomatis (SP110) 1.0 1.0 77.0 88.0 112.0 229.0 427.0 511.0 656.0 810.0 55.0 58.0 77.0 95.0 95.0 692.0 1224.5 1636.0 2137.0 2647.0
Bulleidia extructa (SP294) 20.0 21.0 23.0 34.0 53.0 1.0 1.0 1.0 1.0 1.0 7.0 11.0 14.0 21.0 34.0 6.0 10.0 18.0 26.5 92.0
Campylobacter showae (SP55) 114.0 172.0 175.0 295.0 322.0 730.0 1570.5 1992.0 2557.5 3559.0 112.0 132.0 135.0 161.0 161.0 756.0 1020.0 1387.0 1967.5 3488.0
Tannerella forsythia_nov_97.308% (SPN427) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 6.0 10.0 48.0 12.0 20.5 23.0 34.0 81.0
Parvimonas sp. HMT393 (SP302) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 11.0 15.0 17.0 30.0 14.0 47.0 62.0 77.5 93.0
Megasphaera micronuciformis (SP267) 99.0 179.0 185.0 205.0 322.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 8.0 9.0 14.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga gingivalis_nov_96.218% (SPN451) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 70.0 80.0 109.0 116.0 148.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas gingivalis (SP380) 1.0 37.0 37.0 47.0 93.0 1.0 8.5 33.0 53.0 148.0 53.0 67.0 86.0 87.0 94.0 1336.0 2381.0 2589.0 3159.0 11176.0
Peptoanaerobacter [Eubacterium] yurii (SP146) 113.0 118.0 136.0 176.0 201.0 1.0 40.5 59.0 82.0 159.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 4.0 18.0
Peptoniphilus lacrimalis (SP301) 1.0 1.0 1.0 8.0 8.0 1.0 87.5 134.0 179.5 243.0 1.0 1.0 1.0 1.0 4.0 1.0 1.0 1.0 4.0 8.0
Megasphaera sp. HMT123 (SP268) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 59.0 68.0 71.0 81.0 148.0 1.0 1.0 1.0 1.0 3.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP33) 32.0 41.0 50.0 51.0 78.0 1107.0 1605.5 1999.0 2785.5 4149.0 151.0 169.0 194.0 206.0 210.0 674.0 1009.5 2204.0 2559.5 3529.0
Selenomonas sp. HMT892 nov_97.041% (SPN28) 1.0 1.0 1.0 9.0 14.0 1.0 1.0 1.0 1.0 8.0 12.0 20.0 27.0 28.0 30.0 6.0 9.0 16.0 26.5 87.0
Corynebacterium matruchotii (SP100) 348.0 459.0 463.0 623.0 719.0 1.0 1.0 1.0 1.0 1.0 283.0 348.0 377.0 512.0 723.0 1.0 1.0 1.0 1.0 1.0
Rothia dentocariosa (SP78) 352.0 401.0 531.0 682.0 870.0 1.0 1.0 1.0 1.0 1.0 690.0 767.0 960.0 1035.0 1447.0 1.0 1.0 1.0 5.0 17.0
Aggregatibacter segnis (SP252) 1.0 1.0 34.0 56.0 91.0 53.0 140.0 330.0 609.0 1911.0 267.0 315.0 320.0 556.0 723.0 248.0 629.5 1040.0 1366.5 3274.0
Saccharibacteria_(TM7)_[G-4] bacterium HMT355 (SP216) 1.0 1.0 1.0 1.0 1.0 1.0 76.5 153.0 233.0 356.0 1.0 1.0 7.0 9.0 12.0 22.0 51.0 62.0 109.0 172.0
Prevotella veroralis (SP223) 31.0 40.0 61.0 63.0 73.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 6.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT219 (SP240) 78.0 107.0 116.0 130.0 149.0 1.0 1.0 1.0 1.0 1.0 40.0 55.0 64.0 71.0 91.0 1.0 2.5 7.0 10.0 25.0
Peptostreptococcaceae_[XI][G-2] bacterium HMT091 (SP173) 1.0 1.0 1.0 9.0 15.0 1.0 44.0 50.0 77.5 101.0 1.0 5.0 5.0 9.0 19.0 41.0 76.0 108.0 158.0 206.0
Prevotella sp. HMT305 nov_93.661% (SPN371) 1.0 1.0 1.0 1.0 1.0 17.0 35.5 73.0 125.5 177.0 1.0 1.0 7.0 9.0 24.0 1.0 20.0 28.0 41.5 79.0
Peptostreptococcaceae_[XI][G-4] bacterium HMT369 (SP296) 1.0 1.0 1.0 1.0 42.0 1.0 52.0 91.0 144.0 206.0 1.0 1.0 6.0 8.0 16.0 47.0 74.0 166.0 216.5 318.0
Bacteroidetes_[G-3] bacterium HMT436 (SP389) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 7.5 42.0 168.5 400.0
Selenomonas sp. HMT442 (SP376) 1.0 1.0 1.0 1.0 7.0 1.0 1.0 1.0 1.0 1.0 77.0 101.0 109.0 115.0 115.0 1.0 1.0 1.0 1.0 5.0
Lachnoanaerobaculum gingivalis (SP262) 38.0 57.0 83.0 89.0 100.0 1.0 1.0 1.0 1.0 1.0 69.0 88.0 89.0 101.0 121.0 1.0 12.5 19.0 27.5 44.0
Fusobacterium nucleatum (SP62) 2315.0 2940.0 3289.0 4182.0 4353.0 247.0 677.0 962.0 1908.5 2507.0 696.0 738.0 852.0 1049.0 1144.0 60.0 71.0 80.0 103.0 201.0
Lachnoanaerobaculum sp. HMT083 (SP259) 1.0 1.0 1.0 4.0 11.0 1.0 1.0 1.0 1.0 1.0 35.0 59.0 60.0 62.0 157.0 1.0 1.0 1.0 1.0 1.0
Prevotella marshii (SP135) 1.0 1.0 21.0 32.0 53.0 30.0 129.0 169.0 204.0 376.0 1.0 6.0 9.0 24.0 24.0 1.0 1.0 1.0 7.5 24.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP47) 190.0 227.0 284.0 350.0 376.0 1.0 1.0 1.0 1.0 1.0 583.0 664.0 752.0 830.0 886.0 1.0 1.0 1.0 1.0 7.0
Prevotella buccae (SP163) 1.0 1.0 36.0 56.0 68.0 90.0 134.5 275.0 366.0 682.0 27.0 28.0 32.0 43.0 57.0 40.0 76.5 108.0 142.5 246.0
Treponema vincentii (SP276) 1.0 1.0 1.0 1.0 1.0 1.0 20.5 35.0 46.0 88.0 1.0 5.0 12.0 13.0 31.0 1.0 1.0 1.0 3.0 9.0
Prevotella intermedia (SP23) 109.0 115.0 180.0 242.0 252.0 126.0 296.5 899.0 1274.0 2659.0 301.0 371.0 382.0 433.0 812.0 1008.0 1712.0 2796.0 3611.5 6407.0
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP144) 45.0 61.0 64.0 78.0 101.0 54.0 131.5 282.0 748.0 2139.0 32.0 34.0 39.0 62.0 92.0 341.0 499.5 692.0 748.0 1123.0
Streptococcus anginosus (SP43) 30.0 49.0 51.0 51.0 116.0 175.0 335.5 526.0 635.0 957.0 117.0 143.0 165.0 180.0 203.0 121.0 194.5 269.0 386.5 641.0
Granulicatella adiacens (SP48) 305.0 527.0 610.0 686.0 1061.0 454.0 690.5 763.0 1137.0 1687.0 604.0 756.0 774.0 910.0 960.0 35.0 68.5 86.0 132.0 165.0
Neisseria sp. HMT020 (SP45) 56.0 122.0 132.0 159.0 197.0 1.0 36.0 72.0 1088.5 2731.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Kingella denitrificans (SP367) 42.0 80.0 84.0 96.0 109.0 1.0 1.0 1.0 1.0 1.0 219.0 376.0 498.0 588.0 622.0 1.0 1.0 1.0 1.0 1.0
Ottowia sp. HMT894 nov_96.988% (SPN120) 44.0 60.0 76.0 83.0 144.0 1.0 19.5 53.0 740.5 2858.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Neisseria flavescens (SP164) 83.0 123.0 147.0 230.0 266.0 1.0 23.0 38.0 98.0 289.0 1.0 1.0 1.0 1.0 1.0 1.0 10.5 26.0 42.5 120.0
Prevotella sp. HMT304 (SP344) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 13.0 13.0 17.0 20.0 21.0 1.0 6.5 15.0 34.5 55.0
Ruminococcaceae_[G-2] bacterium HMT085 (SP120) 1.0 95.0 111.0 122.0 147.0 138.0 217.5 243.0 295.0 427.0 1.0 14.0 18.0 40.0 43.0 35.0 84.0 115.0 161.0 186.0
Selenomonas dianae (SP354) 11.0 19.0 55.0 71.0 125.0 1.0 1.0 9.0 21.0 39.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0
Streptococcus oralis (SP112) 606.0 772.0 1005.0 1443.0 1617.0 3083.0 5173.5 6339.0 7239.0 8975.0 335.0 363.0 561.0 619.0 942.0 286.0 690.5 998.0 1198.0 1696.0
Filifactor alocis (SP69) 1.0 66.0 70.0 142.0 146.0 53.0 93.5 157.0 179.5 230.0 159.0 161.0 197.0 210.0 220.0 379.0 549.5 656.0 725.5 1024.0
Bergeyella sp. HMT907 (SP283) 1.0 1.0 1.0 1.0 1.0 1.0 24.0 34.0 50.0 94.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT146 (SP239) 1.0 1.0 1.0 1.0 20.0 1.0 1.0 1.0 1.0 7.0 1.0 20.0 21.0 22.0 66.0 3.0 8.0 16.0 23.5 46.0
Neisseria flava (SP80) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 37.0 48.0 78.0 78.0 141.0 1.0 36.0 58.0 145.5 224.0
Dialister micraerophilus (SP355) 1.0 1.0 1.0 1.0 18.0 1.0 19.5 50.0 59.5 106.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Bacteroides heparinolyticus (SP280) 1.0 1.0 1.0 1.0 1.0 1.0 13.5 37.0 208.5 1824.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT137 nov_97.137% (SPN267) 90.0 90.0 92.0 123.0 137.0 1.0 1.0 1.0 1.0 1.0 3.0 6.0 7.0 8.0 10.0 1.0 1.0 1.0 1.0 1.0
Lachnospiraceae_[G-8] bacterium HMT500 (SP21) 1.0 1.0 11.0 18.0 23.0 21.0 91.0 112.0 163.0 217.0 11.0 21.0 23.0 27.0 29.0 62.0 155.0 183.0 204.0 376.0
Bacteroidetes_[G-7] bacterium HMT911 (SP161) 1.0 1.0 1.0 1.0 3.0 1.0 8.0 24.0 55.5 84.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Treponema sp. HMT270 (SP115) 26.0 40.0 52.0 70.0 82.0 1.0 8.0 17.0 21.5 45.0 1.0 1.0 4.0 6.0 8.0 1.0 1.0 1.0 1.0 1.0
Bacteroidales_[G-2] bacterium HMT274 (SP35) 97.0 170.0 185.0 233.0 244.0 203.0 325.0 478.0 557.5 800.0 501.0 603.0 655.0 757.0 865.0 127.0 181.5 231.0 285.5 416.0
Catonella morbi (SP26) 145.0 155.0 214.0 235.0 256.0 342.0 468.5 504.0 578.0 808.0 102.0 116.0 138.0 143.0 174.0 162.0 222.0 274.0 340.0 852.0
Campylobacter rectus (SP293) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 82.0 61.0 66.0 67.0 67.0 120.0 1.0 1.0 1.0 1.0 57.0
Peptostreptococcaceae_[XI][G-4] bacterium HMT103 (SP231) 1.0 1.0 1.0 1.0 38.0 1.0 30.0 38.0 57.5 102.0 1.0 1.0 1.0 1.0 9.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas sp. HMT284 (SP229) 10.0 28.0 38.0 53.0 64.0 1.0 1.0 1.0 6.5 16.0 102.0 110.0 110.0 158.0 159.0 5.0 11.0 15.0 19.5 45.0
Streptococcus salivarius (SP37) 26.0 30.0 63.0 76.0 123.0 97.0 185.5 533.0 580.5 1055.0 1.0 4.0 10.0 20.0 44.0 1.0 17.0 55.0 129.5 250.0
Actinomyces naeslundii (SP61) 32.0 137.0 192.0 216.0 445.0 1.0 1.0 1.0 1.0 8.0 585.0 612.0 626.0 706.0 781.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT326 (SP343) 1.0 1.0 1.0 1.0 21.0 1.0 1.0 1.0 1.0 12.0 26.0 72.0 74.0 91.0 115.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT892 (SP68) 8.0 26.0 28.0 31.0 39.0 1.0 1.0 1.0 1.0 1.0 11.0 12.0 17.0 18.0 25.0 1.0 4.5 9.0 23.0 63.0
Capnocytophaga gingivalis_nov_90.756% (SPN339) 1.0 1.0 91.0 94.0 104.0 1.0 1.0 1.0 1.0 1.0 229.0 274.0 379.0 425.0 469.0 1.0 1.0 1.0 3.5 13.0
Tannerella multispecies_spp4_2 (SPP4) 167.0 181.0 282.0 299.0 461.0 1.0 1.0 1.0 1.0 1.0 1.0 15.0 21.0 26.0 27.0 1.0 1.0 1.0 1.0 1.0
Erysipelotrichaceae_[G-1] bacterium HMT905 (SP74) 1.0 18.0 34.0 34.0 46.0 1.0 11.5 17.0 24.5 45.0 13.0 16.0 16.0 17.0 26.0 1.0 1.0 1.0 1.0 1.0
Prevotella oralis (SP243) 1.0 1.0 1.0 2.0 3.0 1.0 35.0 66.0 125.0 180.0 13.0 23.0 34.0 35.0 43.0 9.0 26.0 58.0 96.5 141.0
Prevotella saccharolytica (SP94) 123.0 175.0 187.0 229.0 279.0 23.0 98.0 164.0 177.5 228.0 29.0 51.0 59.0 73.0 82.0 78.0 108.5 206.0 269.5 349.0
Prevotella sp. HMT314 (SP201) 90.0 128.0 173.0 205.0 206.0 1.0 1.0 1.0 1.0 1.0 268.0 283.0 304.0 315.0 475.0 1.0 1.0 1.0 1.0 1.0
Prevotella maculosa (SP87) 136.0 136.0 181.0 200.0 263.0 1.0 15.5 35.0 61.0 83.0 50.0 52.0 60.0 65.0 89.0 1.0 1.0 1.0 6.5 20.0
Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP108) 1.0 1.0 1.0 1.0 12.0 1.0 77.0 108.0 177.5 502.0 99.0 110.0 128.0 139.0 176.0 36.0 56.0 63.0 76.5 120.0
Porphyromonas endodontalis (SP32) 194.0 248.0 255.0 293.0 388.0 165.0 287.0 333.0 369.5 673.0 105.0 126.0 180.0 212.0 277.0 163.0 221.0 357.0 434.0 613.0
Saccharibacteria_(TM7)_[G-8] bacterium HMT955 (SP167) 1.0 1.0 1.0 1.0 1.0 1.0 39.5 91.0 115.0 173.0 29.0 34.0 36.0 37.0 42.0 1.0 11.5 21.0 32.0 66.0
Parvimonas micra (SP12) 674.0 686.0 832.0 1194.0 1760.0 155.0 203.5 267.0 358.5 1178.0 169.0 188.0 217.0 222.0 226.0 26.0 73.5 104.0 121.0 295.0
Fusobacterium sp. HMT370 (SP118) 1.0 1.0 1.0 1.0 12.0 1.0 27.0 41.0 58.0 140.0 1.0 1.0 9.0 13.0 15.0 1.0 1.0 1.0 7.0 18.0
Treponema socranskii (SP39) 68.0 147.0 159.0 165.0 236.0 118.0 211.0 289.0 330.5 423.0 56.0 87.0 95.0 111.0 180.0 27.0 53.5 100.0 121.5 171.0
Veillonella atypica (SP114) 146.0 231.0 232.0 234.0 334.0 1.0 6.0 30.0 113.5 282.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 21.0 40.0
Prevotella melaninogenica (SP50) 206.0 297.0 362.0 464.0 2734.0 1.0 1.0 1.0 1.0 1.0 62.0 95.0 106.0 120.0 129.0 1.0 1.0 1.0 1.0 1.0
Arachnia propionica (SP76) 377.0 458.0 528.0 560.0 1038.0 1.0 1.0 1.0 1.0 9.0 402.0 449.0 468.0 472.0 660.0 1.0 1.0 1.0 1.0 4.0
Selenomonas noxia (SP63) 262.0 354.0 370.0 461.0 610.0 1.0 1.0 1.0 1.0 1.0 98.0 124.0 124.0 138.0 149.0 1.0 1.0 1.0 1.0 1.0
Treponema maltophilum (SP58) 58.0 77.0 84.0 111.0 144.0 98.0 135.5 159.0 192.5 212.0 50.0 53.0 56.0 83.0 96.0 17.0 36.0 50.0 70.5 99.0
Streptococcus sp. HMT064 (SP91) 599.0 662.0 887.0 1097.0 1559.0 719.0 1574.0 1681.0 2127.5 3740.0 913.0 1352.0 1625.0 1696.0 1789.0 211.0 547.0 961.0 1267.5 1953.0
Campylobacter gracilis (SP179) 153.0 193.0 206.0 234.0 305.0 1.0 1.0 1.0 1.0 1.0 248.0 321.0 327.0 331.0 339.0 1.0 1.0 1.0 1.0 1.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP129) 640.0 896.0 1128.0 1376.0 1818.0 526.0 997.5 1269.0 1464.0 2155.0 519.0 556.0 748.0 1301.0 1327.0 147.0 261.5 668.0 847.0 1162.0
Corynebacterium matruchotii_nov_97.951% (SPN404) 1.0 1.0 1.0 1.0 8.0 1.0 1.0 1.0 1.0 1.0 8.0 18.0 19.0 152.0 519.0 1.0 1.0 1.0 1.0 1.0
Veillonella rogosae (SP162) 1.0 1.0 7.0 13.0 54.0 1.0 1.0 1.0 1.0 14.0 1.0 17.0 21.0 58.0 80.0 1.0 11.5 37.0 52.5 88.0
Leptotrichia sp. HMT221 (SP152) 1.0 51.0 75.0 211.0 767.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum_subsp._vincentii (SP153) 206.0 262.0 267.0 487.0 507.0 1.0 14.0 92.0 153.5 206.0 286.0 328.0 347.0 478.0 602.0 431.0 477.5 639.0 798.5 2000.0
Gemella morbillorum (SP207) 124.0 298.0 312.0 357.0 399.0 1.0 51.5 72.0 148.0 197.0 306.0 387.0 647.0 688.0 783.0 96.0 157.5 218.0 384.0 527.0
Neisseria elongata (SP42) 616.0 738.0 930.0 1478.0 2191.0 338.0 788.5 1392.0 4087.0 16311.0 629.0 904.0 1359.0 1420.0 1860.0 1169.0 1763.0 2606.0 3612.0 8933.0
Leptotrichia sp. HMT392 (SP4) 287.0 327.0 403.0 510.0 626.0 1.0 1.0 1.0 1.0 4.0 125.0 164.0 171.0 188.0 254.0 1.0 1.0 1.0 1.0 1.0
Veillonella multispecies_spp25_2 (SPP25) 3367.0 3506.0 3720.0 4077.0 6028.0 630.0 768.0 1795.0 2940.5 3983.0 969.0 1031.0 1210.0 1233.0 1501.0 446.0 828.0 1790.0 2224.5 4435.0
Capnocytophaga haemolytica (SP132) 64.0 75.0 100.0 109.0 111.0 1.0 1.0 1.0 1.0 1.0 1.0 8.0 9.0 10.0 10.0 1.0 1.0 1.0 1.0 1.0
Olsenella sp. HMT807 (SP119) 102.0 114.0 149.0 152.0 187.0 1.0 1.0 1.0 1.0 1.0 176.0 184.0 223.0 246.0 268.0 1.0 1.0 1.0 1.0 1.0
Veillonella parvula (SP38) 951.0 1135.0 1141.0 1256.0 2283.0 373.0 551.5 1275.0 2240.5 3352.0 459.0 518.0 574.0 688.0 1210.0 287.0 600.5 885.0 1593.0 2411.0
Leptotrichia hongkongensis (SP130) 298.0 299.0 366.0 452.0 600.0 1.0 1.0 1.0 1.0 4.0 93.0 96.0 110.0 123.0 152.0 1.0 1.0 1.0 1.0 1.0
Lancefieldella parvula (SP275) 93.0 100.0 148.0 226.0 258.0 1.0 1.0 27.0 72.0 100.0 1.0 1.0 1.0 16.0 33.0 7.0 22.0 37.0 45.0 93.0
Bacteroidetes_[G-5] bacterium HMT511 (SP273) 1.0 1.0 13.0 36.0 44.0 1.0 1.0 1.0 1.0 19.0 24.0 46.0 47.0 71.0 72.0 1.0 4.5 6.0 12.0 17.0
Treponema denticola (SP157) 78.0 93.0 97.0 113.0 121.0 28.0 79.5 123.0 142.0 207.0 231.0 258.0 300.0 329.0 332.0 47.0 61.5 86.0 113.5 171.0
Peptidiphaga gingivicola (SP196) 137.0 296.0 323.0 442.0 579.0 1.0 1.0 1.0 1.0 1.0 88.0 93.0 113.0 119.0 227.0 1.0 1.0 1.0 1.0 1.0
Neisseria sicca (SP36) 761.0 1181.0 1285.0 1801.0 3017.0 1.0 214.5 243.0 627.0 1893.0 1.0 15.0 70.0 74.0 112.0 45.0 104.0 225.0 1101.5 2473.0
Tannerella forsythia (SP184) 123.0 144.0 199.0 199.0 247.0 54.0 130.0 216.0 258.0 307.0 225.0 228.0 235.0 323.0 464.0 60.0 92.5 120.0 140.5 386.0
Leptotrichia sp. HMT215 (SP191) 165.0 228.0 273.0 301.0 460.0 1.0 1.0 1.0 1.0 1.0 158.0 183.0 191.0 202.0 283.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT292 (SP154) 1.0 1.0 1.0 10.0 14.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium sp. HMT204 (SP228) 133.0 142.0 267.0 299.0 301.0 1.0 1.0 1.0 1.0 1.0 145.0 157.0 209.0 213.0 266.0 1.0 1.0 1.0 1.0 1.0
Veillonellaceae_[G-1] bacterium HMT155 (SP168) 110.0 142.0 160.0 213.0 229.0 1.0 1.0 1.0 1.0 1.0 11.0 13.0 18.0 29.0 31.0 1.0 1.0 1.0 1.0 1.0
Peptidiphaga gingivicola_nov_96.920% (SPN213) 64.0 68.0 91.0 102.0 219.0 1.0 1.0 1.0 1.0 1.0 153.0 173.0 176.0 239.0 243.0 1.0 1.0 1.0 1.0 1.0
Rothia aeria (SP208) 86.0 160.0 191.0 217.0 220.0 1.0 1.0 1.0 1.0 1.0 189.0 263.0 335.0 449.0 467.0 1.0 1.0 1.0 1.0 6.0
Prevotella sp. HMT300 nov_97.638% (SPN9) 1.0 6.0 14.0 25.0 33.0 1.0 5.0 24.0 42.0 103.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium durum (SP211) 129.0 163.0 195.0 343.0 345.0 1.0 1.0 1.0 1.0 1.0 134.0 173.0 194.0 230.0 296.0 1.0 1.0 1.0 1.0 1.0
Tannerella sp. HMT286 (SP11) 111.0 187.0 193.0 268.0 280.0 1.0 1.0 1.0 1.0 1.0 22.0 26.0 37.0 47.0 81.0 1.0 1.0 1.0 1.0 1.0
Peptostreptococcaceae_[XI][G-4] multispecies_spp14_2 (SPP14) 1.0 1.0 1.0 1.0 1.0 1.0 3.0 18.0 39.0 109.0 1.0 1.0 1.0 1.0 11.0 1.0 1.0 1.0 1.0 32.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP258) 130.0 202.0 210.0 253.0 274.0 1.0 1.0 1.0 1.0 1.0 61.0 63.0 64.0 69.0 98.0 1.0 1.0 1.0 1.0 1.0
Streptococcus gordonii (SP3) 258.0 258.0 319.0 392.0 473.0 128.0 204.5 293.0 356.0 438.0 153.0 185.0 204.0 219.0 382.0 1.0 29.0 70.0 93.5 226.0
Alloprevotella rava (SP310) 1.0 1.0 13.0 29.0 39.0 1.0 1.0 1.0 1.0 1.0 38.0 51.0 54.0 70.0 81.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT212 (SP71) 244.0 290.0 328.0 341.0 418.0 1.0 1.0 1.0 1.0 1.0 94.0 108.0 145.0 213.0 267.0 1.0 1.0 1.0 1.0 4.0
Actinomyces sp. HMT171 (SP93) 11.0 33.0 45.0 53.0 56.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 12.0 17.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT138 (SP210) 53.0 54.0 55.0 84.0 145.0 36.0 72.0 99.0 118.5 161.0 11.0 21.0 22.0 22.0 42.0 1.0 24.0 59.0 90.5 184.0
Neisseria bacilliformis (SP365) 6.0 36.0 39.0 44.0 65.0 1.0 1.0 1.0 1.0 6.0 88.0 149.0 202.0 231.0 490.0 1.0 1.0 1.0 1.0 8.0
Alloprevotella sp. HMT473 (SP224) 100.0 110.0 172.0 180.0 198.0 1.0 1.0 1.0 1.0 1.0 95.0 144.0 145.0 161.0 192.0 1.0 1.0 1.0 1.0 3.0
Selenomonas sp. HMT137 (SP232) 1.0 14.0 23.0 39.0 40.0 1.0 1.0 1.0 1.0 1.0 20.0 24.0 26.0 27.0 38.0 1.0 1.0 1.0 1.0 1.0
Arachnia rubra (SP337) 111.0 151.0 159.0 160.0 186.0 1.0 1.0 1.0 1.0 1.0 85.0 93.0 96.0 111.0 240.0 1.0 1.0 1.0 1.0 1.0
Prevotella salivae (SP170) 35.0 113.0 166.0 169.0 180.0 1.0 1.0 1.0 1.0 3.0 9.0 11.0 13.0 14.0 24.0 1.0 1.0 1.0 1.0 1.0
Treponema sp. HMT247 (SP328) 49.0 50.0 74.0 77.0 143.0 1.0 1.0 1.0 1.0 1.0 103.0 132.0 133.0 147.0 166.0 1.0 1.0 1.0 1.0 1.0
Prevotella micans (SP330) 67.0 74.0 78.0 93.0 132.0 1.0 1.0 1.0 1.0 1.0 78.0 121.0 125.0 129.0 148.0 1.0 1.0 1.0 1.0 1.0
Slackia exigua (SP250) 43.0 60.0 94.0 117.0 142.0 1.0 31.0 59.0 73.0 144.0 25.0 25.0 26.0 27.0 33.0 26.0 41.5 50.0 69.5 99.0
Selenomonas infelix (SP30) 1.0 96.0 100.0 156.0 165.0 17.0 40.0 69.0 103.5 161.0 86.0 115.0 194.0 196.0 298.0 1.0 14.5 23.0 32.5 69.0
Absconditabacteria_(SR1)_[G-1] bacterium HMT874 (SP304) 67.0 97.0 117.0 173.0 176.0 1.0 1.0 1.0 1.0 1.0 56.0 57.0 64.0 67.0 80.0 1.0 1.0 1.0 1.0 1.0
Actinomyces timonensis (SP236) 1.0 1.0 1.0 1.0 50.0 1.0 5.0 18.0 41.0 71.0 17.0 24.0 26.0 29.0 34.0 1.0 9.5 21.0 36.0 81.0
Treponema sp. HMT237 (SP192) 51.0 131.0 179.0 198.0 241.0 1.0 1.0 1.0 1.0 1.0 11.0 12.0 16.0 21.0 39.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT332 (SP171) 136.0 159.0 173.0 192.0 237.0 1.0 1.0 1.0 1.0 1.0 20.0 31.0 33.0 41.0 115.0 1.0 1.0 1.0 1.0 1.0
Lachnoanaerobaculum orale (SP40) 18.0 43.0 49.0 52.0 58.0 1.0 1.0 23.0 93.5 106.0 30.0 35.0 37.0 41.0 48.0 1.0 1.0 1.0 1.0 5.0
Leptotrichia sp. HMT498 (SP147) 75.0 168.0 218.0 233.0 289.0 1.0 1.0 1.0 1.0 1.0 121.0 153.0 167.0 174.0 220.0 1.0 1.0 1.0 1.0 5.0
Leptotrichia hofstadii (SP67) 277.0 286.0 315.0 459.0 519.0 1.0 1.0 1.0 1.0 21.0 39.0 46.0 46.0 60.0 89.0 1.0 1.0 1.0 1.0 1.0
Cardiobacterium hominis (SP101) 179.0 199.0 342.0 435.0 458.0 1.0 1.0 1.0 1.0 1.0 110.0 155.0 177.0 181.0 242.0 1.0 1.0 1.0 1.0 6.0
Capnocytophaga gingivalis (SP14) 369.0 538.0 569.0 633.0 827.0 1.0 1.0 1.0 1.0 15.0 126.0 168.0 196.0 244.0 268.0 1.0 1.0 1.0 1.0 4.0
Prevotella multispecies_spp9_2 (SPP9) 1.0 1.0 29.0 30.0 54.0 1.0 1.0 1.0 25.5 47.0 35.0 42.0 48.0 49.0 65.0 1.0 15.5 34.0 45.0 60.0
Stomatobaculum longum (SP181) 138.0 181.0 244.0 302.0 368.0 1.0 1.0 1.0 7.5 19.0 1.0 12.0 20.0 21.0 29.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sanguinis_nov_97.782% (SPN146) 1.0 8.0 16.0 19.0 105.0 1.0 1.0 1.0 1.0 14.0 15.0 25.0 29.0 41.0 51.0 1.0 1.0 4.0 7.0 21.0
Prevotella sp. HMT301 (SP219) 25.0 27.0 48.0 58.0 70.0 1.0 1.0 6.0 8.5 16.0 17.0 26.0 28.0 29.0 36.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia wadei (SP188) 110.0 249.0 280.0 391.0 702.0 1.0 1.0 1.0 1.0 1.0 90.0 117.0 160.0 203.0 209.0 1.0 1.0 1.0 1.0 7.0
Capnocytophaga leadbetteri (SP13) 252.0 489.0 531.0 578.0 792.0 1.0 1.0 1.0 1.0 7.0 248.0 397.0 402.0 435.0 551.0 1.0 1.0 1.0 5.0 13.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT869 (SP274) 31.0 40.0 47.0 95.0 108.0 1.0 1.0 1.0 1.0 1.0 67.0 72.0 91.0 102.0 118.0 1.0 1.0 1.0 1.0 1.0
Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP159) 46.0 67.0 106.0 124.0 140.0 1.0 1.0 1.0 1.0 1.0 70.0 79.0 81.0 85.0 115.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-5] bacterium HMT356 (SP182) 149.0 243.0 253.0 369.0 474.0 1.0 1.0 1.0 1.0 16.0 523.0 542.0 570.0 588.0 699.0 1.0 1.0 1.0 1.0 6.0
Prevotella pleuritidis (SP99) 74.0 95.0 101.0 133.0 152.0 1.0 1.0 1.0 1.0 1.0 18.0 29.0 29.0 42.0 45.0 1.0 1.0 1.0 1.0 1.0
Mogibacterium timidum (SP126) 59.0 76.0 95.0 101.0 102.0 1.0 1.0 1.0 1.0 1.0 58.0 72.0 79.0 86.0 93.0 1.0 1.0 1.0 1.0 1.0
Selenomonas artemidis (SP125) 40.0 55.0 58.0 76.0 105.0 1.0 1.0 1.0 1.0 1.0 11.0 22.0 30.0 34.0 36.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT171 nov_96.929% (SPN416) 56.0 67.0 110.0 115.0 120.0 1.0 1.0 1.0 1.0 1.0 9.0 21.0 23.0 26.0 57.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT223 (SP379) 34.0 50.0 55.0 79.0 91.0 1.0 1.0 1.0 1.0 1.0 17.0 34.0 34.0 40.0 42.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium durum_nov_97.787% (SPN18) 1.0 1.0 36.0 42.0 80.0 1.0 1.0 1.0 1.0 1.0 13.0 20.0 39.0 53.0 58.0 1.0 1.0 1.0 1.0 1.0
Actinomyces massiliensis (SP177) 2.0 26.0 29.0 41.0 46.0 1.0 1.0 1.0 1.0 1.0 39.0 41.0 48.0 53.0 74.0 1.0 1.0 1.0 1.0 1.0
Aggregatibacter sp. HMT898 (SP205) 1.0 133.0 188.0 207.0 247.0 1.0 43.5 61.0 103.0 157.0 97.0 110.0 295.0 303.0 401.0 57.0 88.0 125.0 207.5 368.0
Leptotrichia trevisanii (SP156) 18.0 49.0 55.0 72.0 110.0 1.0 1.0 1.0 1.0 1.0 72.0 73.0 80.0 136.0 145.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT170 (SP107) 33.0 60.0 68.0 78.0 100.0 1.0 1.0 1.0 1.0 1.0 48.0 84.0 88.0 119.0 169.0 1.0 1.0 1.0 1.0 1.0
Treponema lecithinolyticum (SP305) 35.0 56.0 62.0 64.0 101.0 1.0 1.0 1.0 1.0 1.0 60.0 65.0 68.0 74.0 104.0 1.0 1.0 1.0 1.0 1.0
Schaalia sp. HMT877 (SP271) 1.0 34.0 42.0 44.0 74.0 1.0 1.0 1.0 1.0 1.0 41.0 57.0 62.0 87.0 118.0 1.0 1.0 1.0 1.0 1.0
Selenomonas noxia_nov_97.446% (SPN49) 14.0 29.0 43.0 49.0 88.0 1.0 1.0 1.0 1.0 1.0 34.0 38.0 45.0 48.0 49.0 1.0 1.0 1.0 1.0 1.0
Selenomonas flueggei (SP264) 1.0 1.0 14.0 30.0 38.0 1.0 1.0 1.0 1.0 35.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0
Johnsonella ignava (SP419) 83.0 93.0 95.0 103.0 139.0 1.0 1.0 1.0 1.0 1.0 14.0 26.0 56.0 68.0 70.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 nov_92.871% (SPN359) 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 101.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 5.0 18.0
Gracilibacteria_(GN02)_[G-1] bacterium HMT872 (SP41) 34.0 35.0 62.0 62.0 75.0 1.0 1.0 1.0 1.0 1.0 38.0 40.0 46.0 49.0 99.0 1.0 1.0 1.0 1.0 3.0
Porphyromonas catoniae (SP1) 572.0 641.0 914.0 991.0 1040.0 1.0 111.0 164.0 188.0 256.0 417.0 453.0 717.0 784.0 861.0 20.0 50.5 74.0 87.0 182.0
Oribacterium sinus (SP261) 55.0 61.0 67.0 89.0 165.0 1.0 1.0 1.0 1.0 28.0 1.0 1.0 9.0 11.0 17.0 1.0 1.0 1.0 1.0 1.0
Cryptobacterium curtum (SP213) 44.0 54.0 69.0 74.0 76.0 1.0 1.0 1.0 1.0 6.0 13.0 14.0 21.0 28.0 35.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 (SP178) 1.0 1.0 31.0 41.0 64.0 1.0 45.0 73.0 97.0 203.0 1.0 1.0 12.0 17.0 18.0 1.0 1.0 7.0 9.5 17.0
Haemophilus parahaemolyticus (SP24) 46.0 77.0 92.0 125.0 129.0 1.0 1.0 1.0 1.0 15.0 1.0 1.0 17.0 21.0 24.0 1.0 1.0 1.0 4.5 8.0
Prevotella sp. HMT300 (SP25) 335.0 347.0 349.0 389.0 633.0 1.0 234.5 413.0 532.5 627.0 118.0 127.0 133.0 139.0 165.0 1.0 21.0 37.0 58.5 81.0
Aggregatibacter sp. HMT458 (SP72) 53.0 58.0 191.0 195.0 234.0 1.0 1.0 1.0 1.0 1.0 58.0 66.0 84.0 122.0 276.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas pasteri (SP46) 288.0 489.0 693.0 767.0 961.0 1.0 1.0 1.0 9.5 21.0 71.0 100.0 110.0 162.0 181.0 1.0 1.0 1.0 1.0 4.0
Fretibacterium sp. HMT360 (SP5) 191.0 243.0 285.0 403.0 428.0 1.0 85.5 91.0 135.5 160.0 199.0 228.0 237.0 237.0 336.0 15.0 23.0 38.0 50.0 89.0
Actinomyces sp. HMT169 (SP73) 69.0 150.0 192.0 201.0 238.0 1.0 1.0 1.0 1.0 11.0 177.0 236.0 242.0 248.0 311.0 1.0 1.0 1.0 1.0 5.0
Actinomyces sp. HMT175 (SP34) 31.0 45.0 57.0 75.0 151.0 1.0 1.0 1.0 1.0 1.0 42.0 61.0 63.0 73.0 82.0 1.0 1.0 1.0 1.0 4.0
Ruminococcaceae_[G-1] bacterium HMT075 (SP286) 93.0 94.0 104.0 107.0 167.0 1.0 1.0 1.0 1.0 4.0 13.0 15.0 26.0 60.0 62.0 1.0 1.0 1.0 1.0 1.0
Eikenella corrodens (SP9) 76.0 164.0 174.0 187.0 261.0 1.0 40.5 64.0 76.5 112.0 95.0 113.0 175.0 177.0 222.0 5.0 10.0 13.0 17.0 40.0
Neisseria mucosa (SP282) 738.0 787.0 1544.0 2285.0 2350.0 1.0 110.0 217.0 301.0 1023.0 117.0 132.0 176.0 258.0 404.0 13.0 111.0 224.0 422.5 3778.0
Capnocytophaga endodontalis (SP140) 105.0 106.0 136.0 154.0 184.0 1.0 1.0 14.0 62.5 96.0 118.0 129.0 139.0 149.0 209.0 1.0 1.0 1.0 1.0 3.0
Anaerolineae_[G-1] bacterium HMT439 (SP220) 22.0 26.0 30.0 39.0 56.0 1.0 49.5 68.0 84.0 181.0 7.0 15.0 16.0 26.0 27.0 1.0 8.5 12.0 20.5 60.0
Streptococcus multispecies_spp1_2 (SPP1) 16.0 49.0 104.0 117.0 122.0 1.0 1.0 1.0 1.0 1.0 27.0 31.0 42.0 45.0 67.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas sp. HMT275 (SP52) 1.0 14.0 28.0 35.0 49.0 1.0 1.0 1.0 18.0 25.0 32.0 36.0 44.0 67.0 68.0 1.0 1.0 1.0 1.0 1.0
Streptococcus intermedius (SP54) 174.0 175.0 193.0 230.0 263.0 1.0 1.0 1.0 1.0 6.0 117.0 132.0 165.0 220.0 304.0 1.0 1.0 1.0 1.0 7.0
Capnocytophaga granulosa (SP266) 1.0 98.0 110.0 145.0 222.0 1.0 1.0 1.0 1.0 1.0 181.0 245.0 252.0 384.0 405.0 1.0 1.0 1.0 1.0 8.0
Kingella oralis (SP237) 99.0 103.0 143.0 170.0 264.0 1.0 1.0 1.0 1.0 3.0 145.0 154.0 159.0 165.0 229.0 1.0 1.0 1.0 1.0 5.0
Campylobacter concisus (SP249) 95.0 119.0 135.0 161.0 165.0 1.0 1.0 1.0 1.0 31.0 20.0 22.0 25.0 35.0 37.0 1.0 1.0 1.0 1.0 1.0
Centipeda periodontii_nov_97.436% (SPN383) 17.0 21.0 27.0 45.0 49.0 1.0 42.0 49.0 61.0 95.0 75.0 78.0 83.0 119.0 130.0 1.0 16.5 21.0 26.5 44.0
Actinomyces sp. HMT448 (SP254) 88.0 93.0 112.0 144.0 148.0 1.0 1.0 1.0 1.0 7.0 14.0 16.0 17.0 18.0 107.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP215) 61.0 72.0 82.0 90.0 146.0 1.0 13.5 38.0 50.0 108.0 79.0 138.0 155.0 160.0 243.0 9.0 13.5 19.0 35.0 132.0
Tannerella serpentiformis (SP116) 1.0 19.0 66.0 77.0 85.0 1.0 1.0 1.0 1.0 1.0 45.0 56.0 57.0 63.0 68.0 1.0 1.0 1.0 1.0 1.0
Dialister invisus (SP187) 223.0 278.0 348.0 403.0 532.0 1.0 17.0 45.0 62.0 92.0 361.0 437.0 444.0 472.0 477.0 26.0 36.5 49.0 60.0 159.0
Mycoplasma salivarium (SP308) 44.0 45.0 51.0 68.0 110.0 1.0 1.0 12.0 18.0 27.0 11.0 13.0 14.0 21.0 28.0 1.0 2.0 5.0 7.0 18.0
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