taxon lfc_(Intercept) lfc_GroupAntibiotic TX se_(Intercept) se_GroupAntibiotic TX W_(Intercept) W_GroupAntibiotic TX p_(Intercept) p_GroupAntibiotic TX q_(Intercept) q_GroupAntibiotic TX diff_(Intercept) diff_GroupAntibiotic TX Staphylococcus saprophyticus (SP1) 1.66302579858001 -3.82061336461645 0.539448987541414 0.875074967777813 3.08282309724853 -4.36604120252532 0.00205047006953033 1.26518624350453e-05 0.137381494658532 0.000847674783148032 FALSE TRUE Lachnospiraceae_[G-14] bacterium_MOT-185 (SP11) -0.0662484835689871 -0.36206480031846 1.13359896359414 1.71251335268304 -0.0584408469807898 -0.211423052410776 0.953397479167162 0.832557170060807 1 1 FALSE FALSE Enterococcus faecalis (SP13) -0.605770142650985 0.716978517845537 1.6265023604568 2.40332268995213 -0.372437296974384 0.298328027627375 0.709567289010584 0.765452814712499 1 1 FALSE FALSE Corynebacterium ammoniagenes (SP14) 2.25969314873809 -5.01394806493261 0.572957116751399 0.924694917938999 3.94391322259908 -5.42227276008818 8.01626755992794e-05 5.88459973697048e-08 0.005451061940751 4.00152782113993e-06 TRUE TRUE Staphylococcus equorum (SP16) 3.44162984147695 -7.37782145041033 0.704508108611361 1.11230114586282 4.88515291649469 -6.63293522428881 1.03348612375808e-06 3.29076249710325e-11 7.23440286630657e-05 2.30353374797227e-09 TRUE TRUE Mammaliicoccus lentus (SP18) 3.65765972017759 -7.80988120781162 0.691247773518401 1.09362362191299 5.29138734373114 -7.14128796354123 1.21391957227006e-07 9.24604193863359e-13 8.61882896311746e-06 6.56468977642985e-11 TRUE TRUE Bradyrhizobium pachyrhizi (SP20) -1.36487407051321 2.23518637356998 0.999691274220993 1.52532605966561 -1.36529557245239 1.46538266976176 0.172160170013147 0.1428165429607 1 1 FALSE FALSE Triticum aestivum (SP22) -3.60711848672507 6.71967520599371 1.98995375695877 2.91417262464084 -1.81266447730815 2.3058603835529 0.069883586508737 0.0211184348858107 1 1 FALSE FALSE Moraxella osloensis (SP24) -1.83400160605263 3.17344144464882 1.3831730205738 2.06194909748061 -1.32593795481335 1.53904936282195 0.184860249719464 0.123792245726029 1 1 FALSE FALSE Eubacteriales_[G-4] bacterium_MOT-164 (SP25) -0.0603279970569083 -0.373905773342617 1.0277847430709 1.56458338540163 -0.0586971128571683 -0.238981045581431 0.953193358981237 0.811120280388942 1 1 FALSE FALSE Jeotgalicoccus halotolerans (SP27) 2.38680667024268 -5.26817510794179 1.514727966399 2.24643621585279 1.575732886161 -2.34512561307773 0.115087375140768 0.0190206702659123 1 1 FALSE FALSE Lachnospiraceae_[G-11] bacterium_MOT-177 (SP3) 0.0108812296233313 -0.516324226703097 0.956343954495817 1.46476250254293 0.0113779457403146 -0.352496889978219 0.990921908631968 0.724465650430099 1 1 FALSE FALSE Actinidia eriantha (SP30) -1.89616520149479 3.29776863553316 1.66275058783739 2.45422546544286 -1.14037860841233 1.34371054410768 0.254128601001238 0.179042006345423 1 1 FALSE FALSE Limosilactobacillus reuteri (SP31) 0.625613330609918 -1.74578842867627 0.836685322181056 1.29755717455541 0.747728344246652 -1.34544239198896 0.454624030894997 0.17848241315951 1 1 FALSE FALSE Clostridium disporicum (SP32) -0.327589973469179 0.160618179481924 1.09076324862101 1.65261393852595 -0.300330959888255 0.0971903816962767 0.763924720021246 0.922575206178763 1 1 FALSE FALSE Enterococcus gallinarum (SP33) -0.190716368578528 -0.113129030299378 0.764215058785286 1.19613414271455 -0.249558506321074 -0.0945788823004746 0.80292879052459 0.924649324114326 1 1 FALSE FALSE Cutibacterium acnes (SP34) -2.2778929644345 4.06122416141256 1.84707534078729 2.71323562873132 -1.23324312448651 1.49681956053023 0.217485070475245 0.134440215162805 1 1 FALSE FALSE Mollicutes_[G-1] bacterium_MOT-186 (SP35) -0.0648208747041992 -0.364920018048036 1.04947337847387 1.59489513295374 -0.0617651443416899 -0.228805023294669 0.950749861253433 0.819020462329843 1 1 FALSE FALSE Corynebacterium stationis (SP36) 2.53822252498628 -5.57100681742898 0.547870050689036 0.887696400864559 4.63289154388718 -6.27580196563057 3.60593470846729e-06 3.47836684699503e-10 0.000248809494884243 2.40007312442657e-08 TRUE TRUE Staphylococcus ureilyticus (SP39) 1.4892742401696 -3.47311024779564 1.80546431638021 2.6547418419215 0.824870492680499 -1.30826666192213 0.409445120215193 0.190782878578592 1 1 FALSE FALSE Psychrobacter alimentarius (SP4) -1.86018920267036 3.22581663788428 1.4188917450814 2.11202083556961 -1.31101559306319 1.52736023412112 0.189852495540518 0.126671459031678 1 1 FALSE FALSE Ligilactobacillus murinus (SP40) 0.129081906239038 -0.75272557993451 0.895009702849949 1.37907193913694 0.144224030005493 -0.545820387300163 0.885323566115463 0.585189407743574 1 1 FALSE FALSE Streptococcus thermophilus (SP41) -1.47644721083751 2.45833265421859 1.49160953531613 2.21400252161617 -0.989834923872756 1.11035675443769 0.322254811640053 0.266845325612641 1 1 FALSE FALSE Stenotrophomonas maltophilia (SP45) -1.67281137869846 2.85106098994049 1.70409134015228 2.5122933945496 -0.981644199042158 1.13484396214464 0.326275164691575 0.256440702753761 1 1 FALSE FALSE Lacticaseibacillus rhamnosus (SP47) -1.8388805558325 3.18319934420856 1.8126454439533 2.664835664973 -1.01447338306932 1.19451994209212 0.310356923864586 0.23227464468535 1 1 FALSE FALSE Atopostipes sp._MOT-201 (SP48) 1.42769268980541 -3.34994714706724 0.724629490169762 1.14059511154585 1.97023818264826 -2.93701692489901 0.048811079427574 0.00331386017460063 1 0.218714771523641 FALSE FALSE Massilia aurea (SP54) -1.88564109161034 3.27672041576425 1.45366620424259 2.16078251510558 -1.29716236513377 1.51645081948663 0.194575326909889 0.129405397145789 1 1 FALSE FALSE Akkermansia muciniphila (SP59) 1.49646723432232 -3.48749623610106 1.13203928031642 1.71033199288226 1.32192165090246 -2.03907560088607 0.186194241980845 0.0414424828994668 1 1 FALSE FALSE Pelomonas saccharophila (SP6) -1.80988045505786 3.12519914265928 1.35033131574721 2.01592337541047 -1.34032324804402 1.55025690994974 0.180140276480406 0.121079865267919 1 1 FALSE FALSE Ralstonia sp._HMT_406 (SP61) -3.25150773180921 6.00845369616197 1.86476939637355 2.73811236291956 -1.74365138023632 2.19437806042239 0.0812198981482324 0.0282082418202869 1 1 FALSE FALSE Pseudomonas helleri (SP65) -1.64425938238623 2.79395699731603 1.28505598621461 1.92448180211978 -1.27952353829325 1.45179704699652 0.200712756144242 0.146558045257751 1 1 FALSE FALSE Cutibacterium granulosum (SP68) -1.94433316863741 3.39410456981839 1.53405838477032 2.27355973201463 -1.26744404772346 1.49285920313641 0.204996558269076 0.135474046181189 1 1 FALSE FALSE Delftia acidovorans (SP69) -1.91532203084924 3.33608229424204 1.49428740043902 2.21775911516296 -1.28176281904439 1.50425818179848 0.199925860763289 0.132514902071537 1 1 FALSE FALSE Ligilactobacillus animalis (SP7) 4.62345752267273 -9.74147681280189 0.693342979325618 1.09657665177695 6.668355576586 -8.88353476887941 2.58685435245269e-11 6.47687238332767e-19 1.86253513376593e-09 4.7281168398292e-17 TRUE TRUE Lactobacillus johnsonii (SP72) 1.22618073218291 -2.94692323182225 1.00216679084268 1.52878507534194 1.22352959945107 -1.92762428110644 0.22112973151846 0.0539018764478645 1 1 FALSE FALSE Stenotrophomonas [Pseudomonas] hibiscicola (SP77) -1.71995613112365 2.94535049479087 1.43142078791388 2.12958786665655 -1.20157269312141 1.38306126781943 0.22952912653783 0.166646080557442 1 1 FALSE FALSE Eubacteriales_[G-2] bacterium_MOT-162 (SP78) -0.145708346407623 -0.203145074641189 1.03311470141594 1.57203207850961 -0.141037917869062 -0.129224509740147 0.887839987591519 0.89718000283891 1 1 FALSE FALSE Leptothrix sp._HMT_025 (SP8) -1.8419793721571 3.18939697685776 1.39404754075415 2.07719184387492 -1.32131747182785 1.53543688622812 0.186395530673885 0.124676548960981 1 1 FALSE FALSE Dubosiella newyorkensis (SP81) 1.30087174081049 -3.09630524907742 1.2097603844009 1.81906798303505 1.07531355596068 -1.70213828067676 0.282234369046686 0.0887294493142318 1 1 FALSE FALSE Streptomyces aculeolatus (SP85) -1.81951003343548 3.14445829941452 1.36343531552135 2.03428635684295 -1.33450411084573 1.54573041737077 0.182038700518165 0.122169687967945 1 1 FALSE FALSE Secundilactobacillus paracollinoides (SP9) -1.60929763151891 2.72403349558139 1.08000466447674 1.6375728835527 -1.4900839639416 1.66345786678614 0.136202160099282 0.0962208180485506 1 1 FALSE FALSE Bifidobacterium pseudolongum (SP92) 1.5081395721122 -3.51084091168083 1.28205804325922 1.9202833442996 1.17634266251958 -1.82829316418477 0.239457974076683 0.0675055652019606 1 1 FALSE FALSE Anaerococcus sp._HMT_290 (SP94) -1.82213713663508 3.14971250581372 1.36701192293764 2.03929870006157 -1.33293434099638 1.5445076808604 0.182553351793147 0.122465391970599 1 1 FALSE FALSE Fusobacterium varium_nov_96.696% (SPN102) -1.34259808675986 2.19063440606328 1.53114094030963 2.26946587417872 -0.876861202919932 0.965264307777277 0.38056203134366 0.334412444188551 1 1 FALSE FALSE Duncaniella freteri_nov_93.293% (SPN107) 1.49806454652011 -3.49069086049664 1.20503069511152 1.81244876859111 1.24317542498904 -1.92595284401341 0.213803196488753 0.0541102622023209 1 1 FALSE FALSE Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.867% (SPN118) 1.74929362218178 -3.99314901181999 1.23785469575648 1.85839178964024 1.41316555826671 -2.14871214674974 0.157607050812812 0.031657225215599 1 1 FALSE FALSE Enterococcus faecalis_nov_95.825% (SPN127) -0.421136038267367 0.347710309078299 0.713312883893386 1.12468852565769 -0.590394548839119 0.309161426604726 0.554926164341489 0.757198734585877 1 1 FALSE FALSE Fusicatenibacter saccharivorans_nov_90.526% (SPN15) -0.362223053422508 0.229884339388582 1.04467983392308 1.58819537286307 -0.346731162658951 0.144745629735821 0.728793296471404 0.884911711176759 1 1 FALSE FALSE Duncaniella freteri_nov_89.775% (SPN150) 1.08139608576113 -2.6573539389787 1.09924977070343 1.66447942694932 0.983758300053249 -1.59650753019467 0.325234366993718 0.110375525890557 1 1 FALSE FALSE Alistipes senegalensis_nov_93.443% (SPN173) 0.463023246412951 -1.42060826028234 1.09935846244342 1.66463140023473 0.421175860495802 -0.853407102666703 0.673626670077266 0.393433584066298 1 1 FALSE FALSE Peptococcus sp._HMT_168_nov_84.866% (SPN179) 0.0547983524350887 -0.604158472326612 1.13587103920351 1.71569111000978 0.0482434629845956 -0.352137088548047 0.961522212040924 0.724735454845361 1 1 FALSE FALSE Duncaniella freteri_nov_89.718% (SPN183) 0.60632988252626 -1.70722153250895 1.10963716472471 1.67900373017626 0.546421751002442 -1.01680627733313 0.584776061981482 0.309245595313841 1 1 FALSE FALSE Oscillospiraceae_[G-6] bacterium_MOT-153_nov_91.631% (SPN189) 0.729872233584152 -1.95430623462474 0.91148279033547 1.40208773946819 0.80075262124864 -1.39385444976931 0.423274872419294 0.163361561709395 1 1 FALSE FALSE Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.000% (SPN194) 0.510145833129172 -1.51485343371478 1.06899398802162 1.62218066522275 0.47722048846439 -0.933837682935745 0.633205123031516 0.350387628078524 1 1 FALSE FALSE Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.719% (SPN210) -0.108043479180573 -0.278474809095288 0.957351301801643 1.46616985587895 -0.112856669205177 -0.189933525081476 0.910144189747875 0.849361221399353 1 1 FALSE FALSE Fusobacterium perfoetens_nov_91.126% (SPN218) -1.82884841539063 3.16313506332483 1.37615194599352 2.05210842187277 -1.32895820168337 1.5414073786794 0.18386176026755 0.123217669337157 1 1 FALSE FALSE Actinidia eriantha_nov_97.011% (SPN220) -1.91942577658486 3.34428978571328 1.49990929465454 2.22564592669853 -1.27969456781514 1.50261537362959 0.200652575837512 0.13293825664853 1 1 FALSE FALSE Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.423% (SPN28) -0.0462995475273551 -0.401962672401724 1.03531204506 1.57510296880483 -0.0447203794723281 -0.255197711110105 0.964330189477579 0.798570398827199 1 1 FALSE FALSE Duncaniella freteri_nov_88.934% (SPN33) 1.15838940795606 -2.81134058336856 1.13905543896789 1.72014496029153 1.01697368567564 -1.63436259633148 0.309165947704384 0.102182737177664 1 1 FALSE FALSE Yaniella halotolerans_nov_97.040% (SPN36) 0.785498255282478 -2.06555827802139 0.840092504656662 1.30232081162798 0.935014002539522 -1.58605948670921 0.349781083227814 0.112725815946858 1 1 FALSE FALSE Oscillospiraceae_[G-1] bacterium_MOT-147_nov_96.674% (SPN38) -0.148916340887434 -0.196729085681566 0.995341108236686 1.5192477095875 -0.149613373400451 -0.129491118821552 0.881069656501712 0.896969051941366 1 1 FALSE FALSE Lachnoclostridium [Clostridium] aminophilum_nov_89.792% (SPN43) -0.506135003472658 0.517708239488882 0.856083431391388 1.32467447156151 -0.591221585319131 0.390819216798687 0.554371961728085 0.695930869496732 1 1 FALSE FALSE Duncaniella freteri_nov_93.699% (SPN50) 1.96775283350957 -4.43006743447557 1.00255428195741 1.52932651662746 1.96273944356178 -2.89674401529698 0.0496764574246634 0.00377057282380295 1 0.245087233547192 FALSE FALSE Oscillospiraceae_[G-3] bacterium_MOT-150_nov_92.917% (SPN51) -0.391664663885821 0.288767560315207 1.00569259360455 1.53371171644001 -0.389447696419873 0.188280207564355 0.696944994742407 0.850656999960287 1 1 FALSE FALSE Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.887% (SPN61) 0.646998418977599 -1.78855860541163 0.814390611428242 1.26637849332063 0.794457119100284 -1.41234126672648 0.426929363030335 0.157849501139643 1 1 FALSE FALSE Muribaculaceae_[G-1] bacterium_MOT-129_nov_88.105% (SPN64) 1.26778358349585 -3.03012893444813 1.15210627418466 1.73839973772555 1.10040506844132 -1.74305648389744 0.271155671127983 0.0813237488576216 1 1 FALSE FALSE Parafannyhessea umbonata_nov_92.161% (SPN65) -0.407229994857 0.319898222257566 0.98515644756092 1.50501744421873 -0.413365811963402 0.212554494624896 0.679338618817365 0.831674468314867 1 1 FALSE FALSE Oribacterium parvum_nov_89.770% (SPN8) -0.361999589642366 0.229437411828299 1.04497643464222 1.5886099145081 -0.346418902514591 0.144426526444878 0.729027921391324 0.885163671322365 1 1 FALSE FALSE Turicibacter sanguinis_nov_95.923% (SPN81) 0.896404411078763 -2.28737058961396 1.02245310674433 1.5571325846984 0.876719338193483 -1.46896328038566 0.380639100413509 0.141842749114986 1 1 FALSE FALSE Oscillospiraceae_[G-2] bacterium_MOT-149_nov_95.198% (SPN82) -0.422762090354545 0.350962413252655 0.964719720462897 1.47646426892496 -0.43822271006515 0.237704643884268 0.661224847452159 0.81211018160022 1 1 FALSE FALSE Staphylococcus saprophyticus_xylosus (SPP1) 0.248061307902854 -0.990684383262142 1.75331392809509 2.58145057838499 0.141481399267935 -0.38377042410083 0.887489653462664 0.701148610771732 1 1 FALSE FALSE Sphingomonas aquatilis_melonis (SPP3) -4.19439883204451 7.89423589663259 0.628166951213469 1.00425032050263 -6.67720392475589 7.86082487151362 2.43543961905238e-11 3.81612014967295e-15 1.77787092190824e-09 2.74760650776453e-13 TRUE TRUE Faecalicatena multispecies_sppn3_2_nov_92.067% (SPPN3) 0.503232896898357 -1.50102756125315 0.736609475511655 1.15741837579514 0.683174617797045 -1.29687552283931 0.494496509425716 0.194674019724869 1 1 FALSE FALSE