taxon lfc_(Intercept) lfc_GroupL. rhamnosus TX se_(Intercept) se_GroupL. rhamnosus TX W_(Intercept) W_GroupL. rhamnosus TX p_(Intercept) p_GroupL. rhamnosus TX q_(Intercept) q_GroupL. rhamnosus TX diff_(Intercept) diff_GroupL. rhamnosus TX Streptomyces aculeolatus (SP1) 0.52292702356873 -0.394555760215572 1.46322811843739 2.11760347365735 0.357379014918859 -0.186321832733929 0.720808084542829 0.852192387193207 1 1 FALSE FALSE Triticum aestivum (SP12) 1.69603569277936 -2.74077309863684 2.05548191306024 2.95262852267244 0.825128006236881 -0.928248534345305 0.409298921153324 0.353278663759729 1 1 FALSE FALSE Stenotrophomonas maltophilia (SP17) 1.03107632416605 -1.41085436141021 1.76175866301991 2.53834432685382 0.585254011124678 -0.555816776504435 0.558376932712198 0.578336115611185 1 1 FALSE FALSE Cutibacterium acnes (SP18) 0.726611275122753 -0.801924263323619 2.05865161963517 2.95710063442777 0.35295494788551 -0.271185990083425 0.724122215911324 0.786247987683741 1 1 FALSE FALSE Ligilactobacillus murinus (SP2) -6.17469572370969 13.0006897343413 0.752082919165948 1.11665245018136 -8.21012625915951 11.6425569408188 2.20956027925292e-16 2.50394463536857e-31 8.17537303323581e-15 9.2645951508637e-30 TRUE TRUE Mammaliicoccus lentus (SP25) -0.990544999017921 2.63238828495773 1.22318620776421 1.77960667594256 -0.809807200841875 1.47919667898722 0.41805099335816 0.139087756902581 1 1 FALSE FALSE Streptococcus thermophilus (SP28) 0.543622816943407 -0.435947346964925 1.49105143439164 2.15680011318827 0.364590251150665 -0.202126912132107 0.715417293110297 0.839817509221697 1 1 FALSE FALSE Delftia acidovorans (SP33) 0.618739020982493 -0.586179755043098 1.59245950731782 2.29969159080191 0.388543016723004 -0.254894942168613 0.697614226804899 0.798804242838499 1 1 FALSE FALSE Cutibacterium granulosum (SP34) 0.647750158770665 -0.644202030619442 1.63178462815203 2.35511592993174 0.396958120327579 -0.273533044565714 0.69139834382766 0.784443494601096 1 1 FALSE FALSE Massilia aurea (SP35) 0.589058081743597 -0.526817876565307 1.55231500798455 2.24311939168776 0.379470712267611 -0.234859490100043 0.704338349037618 0.814317792393315 1 1 FALSE FALSE Actinidia eriantha (SP39) 0.800252816961858 -0.949207347001828 1.77007925338474 2.5500763048305 0.452099992376961 -0.372227036972888 0.651196949177516 0.70972381747767 1 1 FALSE FALSE Enterococcus gallinarum (SP40) -2.82011066750101 6.2915196219239 1.17896499621403 1.71737385277675 -2.39202238960201 3.66345371553865 0.0167558201880145 0.000248837197256238 0.55294206620448 0.00821162750945585 FALSE TRUE Moraxella osloensis (SP41) 0.53741859618588 -0.423538905449872 1.48270486485424 2.14504132411156 0.362458240290938 -0.197450231232862 0.71700962437138 0.843475224400886 1 1 FALSE FALSE Enterococcus faecalis (SP47) -3.06101779018964 6.77333386730116 1.55334599410745 2.24457218159021 -1.97059624951652 3.01765027779257 0.0487700759692776 0.00254742700103866 1 0.0789702370321983 FALSE FALSE Pelomonas saccharophila (SP49) 0.107253144136468 0.436791998648951 1.57595951544554 2.27643869984918 0.0680557736955234 0.191875141938982 0.945741236167012 0.847840009496949 1 1 FALSE FALSE Leptothrix sp._HMT_025 (SP54) 0.545396362290349 -0.439494437658812 1.49343826549515 2.1601627833151 0.365195117127607 -0.20345431420883 0.714965762933923 0.838779950815367 1 1 FALSE FALSE Anaerococcus sp._HMT_290 (SP64) 0.525554126768331 -0.399809966614773 1.46675696944843 2.12257460142272 0.358310297967062 -0.188360854947943 0.720111112378306 0.850593783627475 1 1 FALSE FALSE Staphylococcus equorum (SP65) -0.847748293265876 2.34679487345364 1.03826905851435 1.51943404054683 -0.816501547757676 1.54451908462512 0.414213338665558 0.122462631526997 1 1 FALSE FALSE Pseudomonas helleri (SP68) 0.4575376013863 -0.263776915850711 1.37569872229018 1.99432009751991 0.332585611931527 -0.132264081467533 0.739447105678887 0.894775416568303 1 1 FALSE FALSE Jeotgalicoccus halotolerans (SP7) -0.128077721536198 0.907453729994283 1.75337924391884 2.52652965472792 -0.0730462174571779 0.359170029251846 0.941769339504551 0.719467895956537 1 1 FALSE FALSE Stenotrophomonas [Pseudomonas] hibiscicola (SP70) 0.125057772122193 0.401182742677501 1.65367904744905 2.38597647656462 0.0756239684569424 0.168141952201948 0.939718266993927 0.866471606061298 1 1 FALSE FALSE Ralstonia sp._HMT_406 (SP76) 2.22936650646977 -3.80743472601765 1.95132694752141 2.80569236074563 1.14248742851706 -1.35703927461448 0.253251468633294 0.174768731657812 1 1 FALSE FALSE Psychrobacter alimentarius (SP78) 0.563606192803609 -0.475914098685331 1.51796690926845 2.19472136723603 0.371290170663355 -0.216844883268569 0.710421418249415 0.828329232264259 1 1 FALSE FALSE Bradyrhizobium pachyrhizi (SP80) 0.229234851889872 0.192828583142144 1.07625246154564 1.57286343915832 0.212993568033899 0.122597155189348 0.831331979546778 0.90242610728051 1 1 FALSE FALSE Secundilactobacillus paracollinoides (SP84) 0.312714621652169 0.0258690436175507 1.18439562770326 1.72501586029121 0.264028855171117 0.014996409142107 0.791757684230717 0.988035045150721 1 1 FALSE FALSE Staphylococcus ureilyticus (SP9) -1.86193785005166 4.3751739870252 1.94791374208944 2.80087771561116 -0.955862577392386 1.56207247558129 0.339141667833648 0.118270916175371 1 1 FALSE FALSE Fusobacterium varium_nov_96.696% (SPN102) 0.587179682078615 -0.523061077235341 1.54977757384018 2.23954384649685 0.378879970900372 -0.233556971011542 0.704776998221394 0.815328936008676 1 1 FALSE FALSE Enterococcus faecalis_nov_95.825% (SPN117) -3.37085772068861 7.39301372829911 0.616738759497146 0.924702672546834 -5.46561679281681 7.99501715285101 4.61299939323288e-08 1.29555829103793e-15 1.66067978156384e-06 4.66400984773656e-14 TRUE TRUE Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.719% (SPN208) -2.06395254844402 4.77920338380994 0.942537475128922 1.38478362180793 -2.18978300906467 3.45122754814963 0.0285399775546972 0.000558042863822643 0.913279281750311 0.0178573716423246 FALSE TRUE Fusobacterium perfoetens_nov_91.126% (SPN217) 0.532265405523885 -0.413232524125882 1.47577589796376 2.13527993480204 0.360668178859875 -0.193526158978398 0.718347515369795 0.846546921371586 1 1 FALSE FALSE Actinidia eriantha_nov_97.011% (SPN219) 0.313738521382277 0.0238212441573336 1.6647378571399 2.40156479986295 0.188461216303025 0.0099190511780873 0.850515115623854 0.992085871982716 1 1 FALSE FALSE Lachnoclostridium [Clostridium] aminophilum_nov_89.792% (SPN43) -1.22517101466759 3.10164031625707 1.09121850320458 1.59391683384915 -1.12275498543109 1.94592355786024 0.261541568160302 0.0516639226592563 1 1 FALSE FALSE Turicibacter sanguinis_nov_95.923% (SPN82) -3.85316514478143 8.35762857648475 0.719298097352544 1.07036631887495 -5.35684045177296 7.80819466112249 8.46898420896746e-08 5.80129385105232e-15 2.96414447313861e-06 2.03045284786831e-13 TRUE TRUE Staphylococcus saprophyticus_xylosus (SPP1) -2.44716349025228 5.54562526742644 1.84759710013524 2.65938762486387 -1.32451143708396 2.08530159935234 0.18533324720064 0.0370419323480386 1 1 FALSE FALSE Sphingomonas aquatilis_melonis (SPP2) 2.30044360725827 -3.94958892759464 0.648163802103982 0.969549015986115 3.5491701322889 -4.07363512568529 0.000386447311100206 4.62849766206923e-05 0.013139208577407 0.00157368920510354 TRUE TRUE Lacticaseibacillus_Lactobacillus casei_rhamnosus (SPP3) 0.00641598194658917 0.63846632302871 1.92424695991033 2.76749445999206 0.00333428197121233 0.230701933557093 0.997339632823218 0.817546371283964 1 1 FALSE FALSE Faecalicatena multispecies_sppn3_2_nov_92.067% (SPPN3) -0.923749305844783 2.49879689861145 0.900559964435422 1.32573488373391 -1.02574991374827 1.88483906493705 0.305009480291898 0.0594515690114083 1 1 FALSE FALSE