taxon lfc_(Intercept) lfc_GroupL. rhamnosus TX se_(Intercept) se_GroupL. rhamnosus TX W_(Intercept) W_GroupL. rhamnosus TX p_(Intercept) p_GroupL. rhamnosus TX q_(Intercept) q_GroupL. rhamnosus TX diff_(Intercept) diff_GroupL. rhamnosus TX passed_ss_(Intercept) passed_ss_GroupL. rhamnosus TX Eukaryota;Streptophyta;Magnoliopsida;Poales;Poaceae;Triticum;Triticum aestivum (SP1) -0.0974940164097319 -0.13327853193208 0.819909284279513 1.22195433628094 -0.118908296660409 -0.109069977473723 0.909977654790211 0.917389072501037 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus gallinarum (SP11) -1.54569566711014 3.07289092724373 0.470008766828733 0.654872497535486 -3.2886528426679 4.69234994416178 0.0217458117796981 0.00537377432727962 1 0.327800233964057 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus;Staphylococcus saprophyticus (SP13) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus murinus (SP15) -4.38324303182664 7.22762026360529 0.413842110280343 0.673061057105919 -10.591582932093 10.7384318068901 4.16965948921446e-05 3.85297249745502e-05 0.00262688547820511 0.00242737267339666 TRUE TRUE TRUE TRUE Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;Pseudomonas helleri (SP17) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Eubacteriales_[F-1];Eubacteriales_[G-4];Eubacteriales_[G-4] bacterium_MOT-164 (SP18) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas;Stenotrophomonas maltophilia (SP19) 0.585465579433427 -0.510414251208132 0.401166055156309 0.620639002858673 1.45940956845242 -0.822401184677657 0.281860742883971 0.497295487280967 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Eubacteriales_[F-1];Eubacteriales_[G-2];Eubacteriales_[G-2] bacterium_MOT-162 (SP24) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium disporicum (SP26) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Stenotrophomonas;Stenotrophomonas [Pseudomonas] hibiscicola (SP27) -0.547414270161511 1.32708913110523 0.24086756302151 0.571477772897685 -2.27267741365668 2.32220603152457 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Actinobacteria;Actinomycetia;Actinomycetales;Propionibacteriaceae;Cutibacterium;Cutibacterium acnes (SP29) -0.264848107446404 1.41402676887512 0.409510416857577 0.621859837929964 -0.646743273293864 2.27386732930384 0.563869869034945 0.107540980239706 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Lachnospiraceae_[G-11];Lachnospiraceae_[G-11] bacterium_MOT-177 (SP33) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Bacteria;Actinobacteria;Actinomycetia;Corynebacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium stationis (SP35) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus thermophilus (SP36) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus;Staphylococcus equorum (SP39) 1.00711134084165 -3.83360763920274 0.545665686992163 0.71686546033643 1.84565635122319 -5.34773657166241 0.138685893867069 0.00589458739201549 1 0.353675243520929 FALSE FALSE FALSE TRUE Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Jeotgalicoccus;Jeotgalicoccus halotolerans (SP41) 1.79221605297382 -5.45226166978042 0.548218802071503 0.774106742469404 3.2691619590604 -7.04329438132482 0.0222191519311984 0.000891088220025985 1 0.0552474696416111 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Mammaliicoccus;Mammaliicoccus lentus (SP42) 0.841126790821786 -2.83770033908357 0.507305493035192 0.686359885736188 1.65802815536129 -4.13442043752289 0.172651495977645 0.0144418730346728 1 0.823186762976352 FALSE FALSE FALSE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Lachnospiraceae_[G-14];Lachnospiraceae_[G-14] bacterium_MOT-185 (SP44) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Erysipelotrichi;Erysipelotrichales;Erysipelotrichaceae;Dubosiella;Dubosiella newyorkensis (SP50) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Actinobacteria;Actinomycetia;Corynebacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium ammoniagenes (SP51) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecalis (SP53) -1.37713024549421 2.35536682368554 0.320975456035458 0.674852182396006 -4.29045342751092 3.49019664620927 0.00514629958550537 0.0129802499888769 0.313924274715828 0.752854499354863 FALSE FALSE FALSE TRUE Eukaryota;Streptophyta;Magnoliopsida;Ericales;Actinidiaceae;Actinidia;Actinidia eriantha (SP56) -0.740494855393347 1.03184388924629 0.579011731079781 0.756262681938279 -1.27889439133197 1.36439879143805 0.422475053816552 0.402650739469605 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Atopostipes;Atopostipes sp._MOT-201 (SP57) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Mollicutes;Mollicutes_[O-1];Mollicutes_[F-1];Mollicutes_[G-1];Mollicutes_[G-1] bacterium_MOT-186 (SP59) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Ralstonia;Ralstonia sp._HMT_406 (SP6) 0.277929352886124 0.296746227000692 0.437902648277238 0.645180261638963 0.634682968873405 0.459943126974874 0.590554594447987 0.690717049363121 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lactobacillus;Lactobacillus johnsonii (SP66) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Actinobacteria;Actinobacteria;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium pseudolongum (SP67) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus;Staphylococcus ureilyticus (SP7) 1.33240148317773 -2.42293634752525 0.425812561999335 0.848993834297935 3.12907979257739 -2.85389157098987 0.0140347795047483 0.0213509323894876 0.842086770284898 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Lacticaseibacillus;Lacticaseibacillus rhamnosus (SP70) 0.317511634156254 -0.403769040262098 0.476074021760516 0.811571575363262 0.666937534171891 -0.497515009789949 0.534349961217832 0.639929776249023 1 1 FALSE FALSE TRUE TRUE Bacteria;Verrucomicrobia;Verrucomicrobiae;Verrucomicrobiales;Akkermansiaceae;Akkermansia;Akkermansia muciniphila (SP72) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Limosilactobacillus;Limosilactobacillus reuteri (SP8) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Proteobacteria;Betaproteobacteria;Burkholderiales;Comamonadaceae;Pelomonas;Pelomonas saccharophila (SP88) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Lactobacillales;Lactobacillaceae;Ligilactobacillus;Ligilactobacillus animalis (SP9) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Bradyrhizobiaceae;Bradyrhizobium;Bradyrhizobium pachyrhizi (SP94) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Fusobacteria;Fusobacteria;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium varium_nov_96.696% (SPN102) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella;Duncaniella freteri_nov_93.293% (SPN107) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Muribaculaceae;Muribaculaceae_[G-2];Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.867% (SPN116) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecalis_nov_95.825% (SPN117) -1.93885182698355 2.72560575528614 0.278679004982282 0.61363224555846 -6.95729420702796 4.44175770588066 0.000942918742199017 0.00675382554928645 0.058460962016339 0.398475707407901 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Fusicatenibacter;Fusicatenibacter saccharivorans_nov_90.526% (SPN15) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella;Duncaniella freteri_nov_89.775% (SPN150) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Rikenellaceae;Alistipes;Alistipes senegalensis_nov_93.443% (SPN173) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Bacteria;Firmicutes;Clostridia;Clostridiales;Peptococcaceae;Peptococcus;Peptococcus sp._HMT_168_nov_84.866% (SPN179) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella;Duncaniella freteri_nov_89.718% (SPN183) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_[G-6];Oscillospiraceae_[G-6] bacterium_MOT-153_nov_91.631% (SPN190) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Muribaculaceae;Muribaculaceae_[G-2];Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.000% (SPN194) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Lachnospiraceae_[G-14];Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.719% (SPN208) 0.426275681255733 -0.447421553814673 0.305904623728889 0.570880589291662 1.39349211548213 -0.783739300665005 0.23590861458111 0.477001125509458 1 1 FALSE FALSE TRUE TRUE Eukaryota;Streptophyta;Magnoliopsida;Ericales;Actinidiaceae;Actinidia;Actinidia eriantha_nov_97.011% (SPN220) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Muribaculaceae;Muribaculaceae_[G-2];Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.423% (SPN28) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Bacteria;Actinobacteria;Actinomycetia;Micrococcales;Micrococcaceae;Yaniella;Yaniella halotolerans_nov_97.040% (SPN32) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella;Duncaniella freteri_nov_88.934% (SPN33) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_[G-1];Oscillospiraceae_[G-1] bacterium_MOT-147_nov_96.674% (SPN39) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Lachnoclostridium;Lachnoclostridium [Clostridium] aminophilum_nov_89.792% (SPN45) -0.461147132398139 0.03220702433486 0.24086756302151 0.675482817018837 -1.9145256696808 0.0476800053582442 0.306434244785232 0.969668936631818 1 1 FALSE FALSE TRUE TRUE Bacteria;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella;Duncaniella freteri_nov_93.699% (SPN49) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_[G-3];Oscillospiraceae_[G-3] bacterium_MOT-150_nov_92.917% (SPN50) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Muribaculaceae;Muribaculaceae_[G-1];Muribaculaceae_[G-1] bacterium_MOT-129_nov_88.105% (SPN55) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;Muribaculaceae;Muribaculaceae_[G-1];Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.887% (SPN60) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteria;Actinobacteria;Coriobacteriia;Coriobacteriales;Atopobiaceae;Parafannyhessea;Parafannyhessea umbonata_nov_92.161% (SPN66) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Erysipelotrichia;Erysipelotrichales;Turicibacteraceae;Turicibacter;Turicibacter sanguinis_nov_95.923% (SPN81) -1.06892782369253 1.96271848630328 0.624121502754671 0.971034170791517 -1.71269187005196 2.02126613598305 0.130497670032216 0.0829751845294189 1 1 FALSE FALSE TRUE FALSE Bacteria;Firmicutes;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_[G-2];Oscillospiraceae_[G-2] bacterium_MOT-149_nov_95.198% (SPN82) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Clostridiales;Lachnospiraceae_[XIV];Oribacterium;Oribacterium parvum_nov_89.770% (SPN9) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Bacilli;Bacillales;Staphylococcaceae;Staphylococcus;Staphylococcus saprophyticus_xylosus (SPP1) -0.494037089289641 1.22994079740949 0.673099375177383 0.8339991674719 -0.73397347777874 1.47475062971323 0.483918189686907 0.178512368653858 1 1 FALSE FALSE TRUE TRUE Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;Sphingomonas;Sphingomonas aquatilis_melonis (SPP3) -0.188890131726467 0.619646882283141 0.764169079066262 0.900854128036853 -0.247183688663865 0.687843750722972 0.810991441663425 0.510998303885085 1 1 FALSE FALSE TRUE TRUE Bacteria;Firmicutes;Clostridia;Eubacteriales;Lachnospiraceae;Faecalicatena;Faecalicatena multispecies_sppn3_2_nov_92.067% (SPPN3) 0.565022222307931 -1.29835048982923 0.401954408825274 0.674219002584672 1.40568733643009 -1.92571031794105 0.232531875808157 0.126437793056604 1 1 FALSE FALSE TRUE TRUE