Taxon F18249.S01 F18249.S02 F18249.S03 F18249.S04 F18249.S05 F18249.S06 F18249.S07 F18249.S08 F18249.S09 F18249.S10 F18249.S11 F18249.S12 F18249.S13 F18249.S14 F18249.S15 F18249.S16 Bifidobacterium pseudolongum (SP105) 146 161 864 1397 1297 657 163 160 50 132 49 78 54 28 171 96 Streptococcus agalactiae (SP110) 76 19 102 122 2261 651 224 75 974 179 191 956 308 192 593 1337 Lactobacillus intestinalis (SP119) 33 173 93 193 167 45 458 121 20 97 57 29 96 122 390 20 Clostridium disporicum (SP123) 0 0 6 0 11 10 0 0 0 0 0 0 6 5 0 0 Shigella dysenteriae (SP136) 0 0 0 0 0 0 0 0 22 153 14 1039 170 57 2319 91 Actinidia eriantha (SP14) 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 15 Salmonella enterica (SP144) 0 18 0 75 106 22 16 0 0 380 120 348 61 105 3736 1996 Mammaliicoccus sciuri (SP155) 125 388 0 0 3 0 0 66 2 0 1122 3973 59 0 0 32 Phocaeicola vulgatus (SP162) 0 0 0 0 10 8 13 0 208 270 0 25 11 2 1208 0 Bacteroides uniformis (SP167) 0 0 0 6 4 4 0 0 44 57 0 0 0 0 29 0 Parasutterella excrementihominis (SP17) 0 7 0 3 0 0 0 0 0 21 0 0 0 0 12 0 Longicatena caecimuris (SP176) 0 0 0 0 0 0 3 0 30 12 0 0 0 0 9 0 Collinsella aerofaciens (SP189) 21 55 22 64 0 0 225 17 0 0 0 0 0 0 0 6 Shigella flexneri (SP191) 0 0 0 0 0 0 0 0 23 92 0 400 84 43 1001 34 Roseburia hominis (SP196) 0 0 0 0 7 0 0 0 0 0 0 0 0 0 21 0 Akkermansia muciniphila (SP199) 0 3 33 59 105 28 37 10 0 81 0 0 0 0 22 0 Bacteroides intestinalis (SP202) 0 0 0 0 19 0 0 0 0 80 0 0 0 0 75 0 Enterococcus faecalis (SP207) 4 9 14 90 46 10 0 0 851 782 51 869 62 803 4228 8 Monoglobus pectinilyticus (SP217) 0 0 0 6 0 0 3 0 0 0 0 0 0 0 0 0 Corynebacterium amycolatum (SP226) 17 128 6 58 187 19 69 16 45 67 120 94 0 30 229 259 Parabacteroides goldsteinii (SP227) 0 0 0 0 0 3 0 0 0 0 0 0 0 0 36 0 Erysipelatoclostridium [Clostridium] saccharogumia (SP240) 0 0 0 0 0 0 0 0 11 0 0 0 0 0 15 0 Cutibacterium acnes (SP249) 0 0 0 0 0 0 0 0 0 7 0 3 0 0 0 5 Bacteroides xylanisolvens (SP26) 0 0 0 0 0 0 2 0 0 16 0 0 0 0 63 0 Enterococcus gallinarum (SP27) 0 0 0 0 0 0 0 0 6 0 0 0 130 51 1833 272 Streptococcus mutans (SP28) 29638 37587 30523 51511 40962 27046 40008 21272 2396 1034 1696 9095 829 251 0 0 Lachnospiraceae_[G-3] bacterium_MOT-168 (SP3) 0 0 0 0 0 0 0 0 0 46 0 0 0 0 24 0 Haemophilus parainfluenzae (SP30) 1088 3065 560 1562 4060 6215 1679 1404 1506 275 717 705 504 179 2380 1566 Escherichia coli (SP35) 0 0 0 0 0 0 0 30 0 137 23 1440 260 80 2989 116 Romboutsia ilealis (SP37) 0 0 18 4 228 50 23 4 29 156 8 32 17 81 353 13 Citrobacter koseri (SP43) 0 20 21 77 126 56 0 7 38 1187 191 1031 113 152 10555 5336 Bacteroides thetaiotaomicron (SP44) 0 0 0 0 3 0 0 0 22 35 0 0 0 0 31 0 Veillonella parvula (SP51) 376 289 210 628 727 678 378 244 102 30 53 330 16 7 48 76 Blautia glucerasea (SP52) 0 12 0 0 0 0 23 0 0 0 0 0 0 0 0 0 Staphylococcus haemolyticus (SP54) 0 0 115 0 11 0 160 3 0 0 0 0 0 0 0 0 Lactiplantibacillus plantarum (SP57) 0 0 92 554 0 0 120 0 0 0 0 0 0 0 0 0 Staphylococcus ureilyticus (SP60) 0 37 26 47 51 0 0 33 1651 1393 206 2929 735 668 3085 4467 Adlercreutzia equolifaciens (SP7) 0 0 0 0 19 3 0 0 0 0 0 0 0 0 0 0 Ligilactobacillus murinus (SP72) 2109 1392 1208 1606 429 122 2134 424 7889 10673 222 79 1431 407 5610 406 Streptococcus sp._HMT_064 (SP76) 6 39 0 12 259 41 376 151 23 29 31 0 8 0 934 308 Granulicatella adiacens (SP82) 26 153 48 95 56 33 138 161 214 5 0 0 0 0 0 234 Shigella sonnei (SP83) 0 0 0 0 0 17 0 19 14 65 30 551 152 89 1115 78 Alistipes finegoldii (SP96) 0 0 0 0 8 0 0 0 0 10 0 0 0 0 0 0 Enterococcus avium (SP98) 1 0 0 2 0 80 24 8 88 66 72 73 144 38 868 640 Eubacterium coprostanoligenes_nov_91.379% (SPN1016) 0 0 0 0 0 0 0 0 69 0 0 0 0 0 173 0 Blautia schinkii_nov_94.340% (SPN1050) 0 0 0 0 0 0 0 0 0 55 0 0 0 0 20 0 Lachnospiraceae_[G-14] bacterium_MOT-183_nov_92.060% (SPN1059) 0 0 0 0 0 0 0 0 0 32 0 0 0 0 5 0 Faecalicatena fissicatena_nov_93.946% (SPN107) 0 0 0 0 0 0 0 0 0 34 0 0 0 0 99 0 Mediterraneibacter [Ruminococcus] torques_nov_93.515% (SPN1114) 0 0 0 0 0 0 0 0 19 0 0 0 0 0 79 0 Duncaniella freteri_nov_89.024% (SPN13) 0 0 0 7 27 0 10 0 51 216 0 0 5 0 199 0 Gluceribacter canis_nov_94.561% (SPN14) 0 0 0 0 0 0 0 0 36 20 0 0 0 0 0 0 Erysipelatoclostridium [Clostridium] saccharogumia_nov_96.042% (SPN24) 0 0 0 0 0 0 0 0 11 13 0 0 0 0 0 0 Agathobaculum desmolans_nov_86.345% (SPN243) 0 0 0 0 0 0 0 0 0 25 0 0 0 0 28 0 Anaerocolumna cellulosilytica_nov_88.655% (SPN256) 0 0 0 0 0 0 0 0 0 6 0 0 0 0 87 0 Turicibacter sanguinis_nov_96.137% (SPN269) 0 0 0 0 0 0 0 0 0 26 0 0 15 15 0 0 Oscillospiraceae_[G-4] bacterium_MOT-151_nov_93.347% (SPN277) 0 0 0 0 0 0 0 0 0 4 0 0 0 0 11 0 Eubacterium coprostanoligenes_nov_91.379% (SPN284) 0 0 0 0 0 0 0 0 27 76 0 0 0 0 0 11 Eubacterium coprostanoligenes_nov_90.129% (SPN340) 0 0 0 0 33 3 0 0 0 0 0 0 0 0 0 0 Rothia nasimurium_nov_97.228% (SPN341) 11177 42436 12936 29560 37560 48509 19783 30468 35436 49992 33253 35753 55514 31810 91026 59006 Blautia faecicola_nov_93.111% (SPN415) 0 0 0 0 0 0 0 0 45 146 0 0 0 0 101 0 Raoultibacter timonensis_nov_90.476% (SPN425) 0 0 0 0 0 0 0 0 42 5 0 0 0 0 23 0 Butyricicoccus pullicaecorum_nov_87.216% (SPN440) 0 0 0 0 7 0 0 0 0 0 6 6 0 0 0 0 Gluceribacter canis_nov_93.946% (SPN447) 0 0 0 0 0 0 0 0 0 0 0 0 7 0 44 0 Eubacteriales_[G-1] bacterium_MOT-158_nov_91.507% (SPN449) 0 3 0 0 9 0 0 0 0 6 0 0 0 0 18 0 Oscillospiraceae_[G-2] bacterium_MOT-149_nov_93.555% (SPN51) 0 0 0 0 0 0 0 0 0 10 0 0 0 0 17 0 Blautia producta_nov_89.834% (SPN520) 0 0 0 0 0 0 0 0 0 25 0 0 0 0 84 0 Oscillospiraceae_[G-2] bacterium_MOT-149_nov_87.885% (SPN54) 0 0 0 0 0 0 0 0 0 14 0 0 0 0 25 0 Barnesiella viscericola_nov_90.447% (SPN6) 0 0 0 0 0 0 0 0 0 4 0 0 0 0 20 0 Lachnospiraceae_[G-3] bacterium_MOT-168_nov_93.946% (SPN609) 0 0 0 0 0 0 0 0 7 14 0 0 0 0 6 0 Lachnospiraceae_[G-12] bacterium_MOT-180_nov_90.184% (SPN682) 0 0 0 0 0 0 0 0 0 12 0 0 0 0 10 0 Eubacteriales_[G-1] bacterium_MOT-161_nov_92.308% (SPN685) 0 0 0 0 0 0 0 0 10 15 0 0 0 0 51 0 Ruminococcus champanellensis_nov_91.810% (SPN712) 0 0 0 0 0 0 0 0 121 353 0 0 6 4 534 0 Fusicatenibacter saccharivorans_nov_89.263% (SPN733) 0 0 0 0 0 0 0 0 0 64 0 0 0 0 7 0 Ruminococcus albus_nov_91.045% (SPN74) 0 0 6 0 65 6 0 0 0 0 0 0 0 0 0 0 Streptococcus sp._MOT-045_nov_97.764% (SPN780) 5372 23322 5105 14836 16621 26814 12226 15658 21103 26749 23947 26538 35359 15306 28355 23572 Oscillospiraceae_[G-6] bacterium_MOT-153_nov_97.831% (SPN789) 0 0 0 0 0 0 0 0 0 74 0 0 0 0 658 0 Blautia luti_nov_96.429% (SPN807) 0 0 0 0 0 0 25 11 0 0 0 0 0 0 0 0 Pseudoflavonifractor phocaeensis_nov_91.097% (SPN816) 0 0 0 0 0 0 0 0 0 6 0 0 0 0 25 0 Eubacteriales_[G-1] bacterium_MOT-159_nov_92.797% (SPN824) 0 0 0 0 0 0 0 0 0 31 0 0 0 0 35 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_86.228% (SPN827) 0 0 0 0 42 0 0 0 7 0 0 0 0 0 0 0 Anaerotignum aminivorans_nov_92.812% (SPN831) 0 0 0 0 0 0 0 0 0 5 0 0 0 0 24 0 Paludicola psychrotolerans_nov_87.037% (SPN842) 0 0 0 0 0 0 0 0 0 6 0 0 0 0 13 0 Oscillospiraceae_[G-4] bacterium_MOT-151_nov_95.417% (SPN843) 0 0 0 0 0 0 0 0 11 0 0 0 0 0 27 0 Drancourtella massiliensis_nov_92.276% (SPN848) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 8 Lachnospiraceae_[G-6] bacterium_MOT-171_nov_94.549% (SPN850) 0 0 0 0 0 0 0 0 0 26 0 0 0 0 39 0 Lachnospiraceae_[G-4] bacterium_MOT-169_nov_97.484% (SPN861) 0 0 0 0 0 0 13 0 0 0 0 3 0 0 0 0 Chryseobacterium culicis_nov_97.280% (SPN879) 0 0 15 121 72 13 5 41 0 0 0 0 0 0 0 0 Blautia producta_nov_96.226% (SPN880) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 22 Lacrimispora saccharolytica_nov_90.625% (SPN886) 0 0 0 0 0 0 0 0 11 213 0 0 0 0 30 0 Oscillospiraceae_[G-1] bacterium_MOT-147_nov_90.760% (SPN926) 0 0 0 0 0 0 0 0 50 167 0 0 0 0 0 0 Eubacterium xylanophilum_nov_91.313% (SPN948) 0 0 0 0 0 0 0 0 22 201 0 0 0 0 225 0 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP10) 362 417 886 1450 825 723 941 666 431 30 347 70 54 11 23 2194 Lactiplantibacillus_Lactobacillus pentosus_plantarum (SPP15) 0 0 0 469 0 0 85 0 0 0 0 0 0 0 0 0 Staphylococcus saprophyticus_xylosus (SPP19) 82 259 23 24 29 0 333 441 0 0 9 51 0 6 0 0 Staphylococcus argenteus_aureus_roterodami (SPP2) 64 276 135 82 2848 685 271 377 592 30 0 0 9 31 415 59 Veillonella dispar_parvula (SPP21) 1031 643 554 1966 1846 1606 961 603 276 70 129 833 85 37 122 162