taxon lfc_(Intercept) lfc_GroupPlaque Group 9 se_(Intercept) se_GroupPlaque Group 9 W_(Intercept) W_GroupPlaque Group 9 p_(Intercept) p_GroupPlaque Group 9 q_(Intercept) q_GroupPlaque Group 9 diff_(Intercept) diff_GroupPlaque Group 9 Bifidobacterium pseudolongum (SP105) 0.758422889598453 -0.873084617538224 1.25010340709304 1.77029327801212 0.606688122994619 -0.493186427572396 0.544057905700898 0.621880867006055 1 1 FALSE FALSE Streptococcus agalactiae (SP110) 0.203092547603503 0.237576066451675 1.13196682244403 1.60326121838506 0.179415636197717 0.148183005817967 0.857611354680488 0.882198343140817 1 1 FALSE FALSE Streptococcus mitis (SP117) -0.263792864554263 1.17134689076721 0.982668454782681 1.39217002391801 -0.268445438815476 0.841382065870561 0.788356467433708 0.400133929175981 1 1 FALSE FALSE Lactobacillus intestinalis (SP119) -0.665746373746797 1.97525390915228 1.6044844712471 2.27136485794966 -0.41492852419403 0.869633032420568 0.678194227899912 0.384500979914048 1 1 FALSE FALSE Rubellimicrobium mesophilum (SP122) -0.0364677093537926 0.716696580366267 1.14843428571138 1.62654429356153 -0.0317542847749475 0.44062530802464 0.974668003698324 0.659484277952331 1 1 FALSE FALSE Clostridium disporicum (SP123) -0.671164449594133 1.98609006084695 0.78828321985989 1.11730473164422 -0.851425519007528 1.77757240670074 0.394533021001889 0.0754741090308403 1 1 FALSE FALSE Moraxella osloensis (SP125) -0.309435452179327 1.26263206601733 0.852985006377305 1.2088024306221 -0.36276775074104 1.04453137587384 0.716778384307689 0.296239610605393 1 1 FALSE FALSE Shigella dysenteriae (SP136) -0.691032536420979 2.02582623450064 1.2679485593408 1.79552453365453 -0.545000450791351 1.12826430189587 0.585753207571828 0.259208314842009 1 1 FALSE FALSE Actinidia eriantha (SP14) 0.816327071227507 -0.988892980796332 0.955679739288893 1.35401031239426 0.854184762601459 -0.730343758643682 0.393002624522414 0.465180086840514 1 1 FALSE FALSE Salmonella enterica (SP144) -0.517842251023561 1.6794456637058 1.30958684757271 1.8543971331362 -0.395424138523817 0.905655877964763 0.692529897591039 0.365118022904806 1 1 FALSE FALSE Pseudonocardia profundimaris (SP151) -0.155864816407256 0.955490794473193 1.04114628499426 1.47485156213082 -0.14970501134537 0.647855566625788 0.880997354259462 0.517078371804008 1 1 FALSE FALSE Mammaliicoccus sciuri (SP155) 0.157473718806266 0.328813724046148 1.38600897872757 1.96245171602331 0.113616665709363 0.167552516763293 0.909541675576716 0.866935329103117 1 1 FALSE FALSE Corynebacterium falsenii (SP160) 0.412613735220383 -0.181466308782085 0.864472414605808 1.22504612014552 0.477301216613756 -0.148130185303169 0.633147644758496 0.882240027797337 1 1 FALSE FALSE Phocaeicola vulgatus (SP162) 0.213514995365657 0.216731170927367 1.03413057452468 1.46493213188252 0.206468119815329 0.147946219630568 0.836425264931723 0.882385211545596 1 1 FALSE FALSE Bacteroides uniformis (SP167) 0.00263877122360301 0.638483619211476 0.990989286039113 1.40393488322877 0.00266276463406574 0.454781505067451 0.99787542372008 0.649266437230836 1 1 FALSE FALSE Parasutterella excrementihominis (SP17) 0.253806824385527 0.136147512887627 1.01726443586906 1.44108525163656 0.249499358707745 0.0944756826377982 0.802974536899118 0.924731298475336 1 1 FALSE FALSE Staphylococcus pasteuri (SP172) 0.175890591544545 0.291979978569592 0.958974077322546 1.35866824516504 0.183415376602912 0.214901599127405 0.854472111737019 0.829844038096615 1 1 FALSE FALSE Atopostipes sp._MOT-200 (SP177) -0.395452916563605 1.43466699478589 1.09068222098752 1.54488964607526 -0.362573909204789 0.928653382091473 0.716923203292564 0.353068747410041 1 1 FALSE FALSE Ralstonia sp._HMT_406 (SP180) -0.419354347645371 1.48246985694942 1.02977425461108 1.45877277736196 -0.407229395925953 1.01624453098879 0.683839513273615 0.309512955591281 1 1 FALSE FALSE Collinsella aerofaciens (SP189) 1.81339461642902 -2.98302807119936 1.10012785873393 1.55824466620594 1.64834896419761 -1.91435153663161 0.0992810823988694 0.0555752534903305 1 1 FALSE FALSE Shigella flexneri (SP191) -0.944823610658353 2.53340838297539 1.09841220721809 1.55581893699096 -0.860172168926703 1.6283439690451 0.389694143734281 0.103451971212251 1 1 FALSE FALSE Akkermansia muciniphila (SP199) 0.355415592496779 -0.0670700233348771 0.802693769993897 1.13768454438593 0.442778561118621 -0.0589530935142293 0.65792591176297 0.95298946904265 1 1 FALSE FALSE Micrococcus aloeverae (SP201) -0.763530636404174 2.17082243446703 1.17395817699104 1.6626321486516 -0.650389980979707 1.30565407160421 0.515440347388481 0.191670223363432 1 1 FALSE FALSE Bacteroides intestinalis (SP202) -0.253971836293288 1.15170483424526 0.925039719226958 1.31068735703227 -0.274552358146878 0.878702940152725 0.783660172776523 0.379562364081476 1 1 FALSE FALSE Corynebacterium pilbarense (SP205) -0.24072796765182 1.12521709696232 0.995522812431652 1.41034484308179 -0.241810599059826 0.797831184679328 0.808926925739832 0.42496846187855 1 1 FALSE FALSE Rothia aerolata (SP206) 0.295136518485699 0.0534881246872829 0.96813966206412 1.37162761882267 0.304849114286315 0.0389960977405765 0.76048107296401 0.968893499800838 1 1 FALSE FALSE Enterococcus faecalis (SP207) -0.0113130050836684 0.666387171826018 1.3424216998276 1.90082275289742 -0.0084273109449298 0.350578280279024 0.993276058296624 0.725904753404143 1 1 FALSE FALSE Enterobacter cancerogenus (SP211) 0.515425953423056 -0.38709074518743 0.913731852241002 1.29469856718188 0.564088854031882 -0.298981365237774 0.572693663161412 0.764954263993542 1 1 FALSE FALSE Corynebacterium tuberculostearicum (SP22) -0.565753377053657 1.775267915766 1.26389335851009 1.78979088122671 -0.447627462589551 0.991885663507929 0.65442207992862 0.321253303394709 1 1 FALSE FALSE Corynebacterium amycolatum (SP226) -0.190958975781967 1.02567911322262 1.30601979582809 1.84935364609708 -0.146214457385685 0.554614913911805 0.883752092872019 0.579158085761804 1 1 FALSE FALSE Cutibacterium acnes (SP249) 0.259229246350062 0.125302668958558 1.07645301184424 1.52477121297077 0.240817986013098 0.08217801326038 0.809696188976938 0.934505157175613 1 1 FALSE FALSE Enterococcus gallinarum (SP27) -0.544302472529382 1.73236610671745 0.78509885255373 1.11280118928635 -0.693291641885481 1.55676155219463 0.488126547194733 0.119527108692633 1 1 FALSE FALSE Acidovorax ebreus (SP275) 0.517463170813646 -0.39116517996861 0.914971052511055 1.29645074445383 0.565551412138686 -0.301720047323048 0.571698765374902 0.762865484536459 1 1 FALSE FALSE Streptococcus mutans (SP28) 3.60464112416529 -6.56552108667191 1.02719842869926 1.45513084238035 3.50919649354393 -4.51197988211961 0.000449462714397582 6.42252811862056e-06 0.0341591662942163 0.000488112137015162 TRUE TRUE Haemophilus parainfluenzae (SP30) 0.452010623147952 -0.260260084637222 0.980528757688185 1.389144691703 0.460986605037131 -0.187352754678248 0.644808215349832 0.851384062933208 1 1 FALSE FALSE Escherichia coli (SP35) -0.617175143925396 1.87811144950947 1.29872834560431 1.83904420598543 -0.475214963940916 1.02124323243394 0.634633762385591 0.307139214319361 1 1 FALSE FALSE Romboutsia ilealis (SP37) -1.32163681824341 3.28703479814551 1.11950531899237 1.58564211402992 -1.18055430003046 2.0729991774698 0.237779827338174 0.03817235611457 1 1 FALSE FALSE Staphylococcus warneri (SP38) -0.82807027429836 2.2999017102554 1.33300078129617 1.88750237226853 -0.621207643624311 1.21848944088543 0.534463010885348 0.223038034938902 1 1 FALSE FALSE Romboutsia timonensis (SP40) -0.184216942749451 1.01219504715758 1.00109986653723 1.41823023706976 -0.18401455130211 0.713702909937181 0.854002039562406 0.47541090665122 1 1 FALSE FALSE Staphylococcus hominis (SP41) -0.716567660422577 2.07689648250384 1.14111266360613 1.6161923703203 -0.627955225874093 1.28505524505863 0.530033271461532 0.198772979504681 1 1 FALSE FALSE Citrobacter koseri (SP43) -0.504437862851364 1.65263688736141 1.61664864997809 2.28856467188502 -0.312026897655344 0.722128112726737 0.755020081743245 0.470215715499001 1 1 FALSE FALSE Mycolicibacterium iranicum (SP45) -0.357739616540923 1.35924039474053 0.968558153472282 1.37221932961639 -0.369352748989233 0.990541646954144 0.711864812669403 0.321909443426127 1 1 FALSE FALSE Veillonella parvula (SP51) 1.60058952183785 -2.55741788201701 1.01926680693743 1.4439163897574 1.57033419605521 -1.77116756909082 0.11633738261207 0.0765328405101824 1 1 FALSE FALSE Blautia glucerasea (SP52) 0.368195021028806 -0.0926288803989301 0.828158158632179 1.17369517212697 0.444595053723714 -0.0789207305258557 0.6566124226427 0.937095674094247 1 1 FALSE FALSE Staphylococcus haemolyticus (SP54) 0.717227073976641 -0.7906929862946 1.27296433995386 1.80261635504034 0.563430609535092 -0.438636309985608 0.57314169869953 0.660925082835712 1 1 FALSE FALSE Lactiplantibacillus plantarum (SP57) 0.545300377942647 -0.446839594226611 0.954232107254424 1.35196347316245 0.571454653220188 -0.330511587847404 0.56769149080657 0.741013438294011 1 1 FALSE FALSE Anaerococcus sp._HMT_295 (SP58) -0.116245298844432 0.876251759347545 0.952713450592834 1.34981620906508 -0.122014965540895 0.649163755378565 0.902887166041169 0.516232536179174 1 1 FALSE FALSE Staphylococcus ureilyticus (SP60) -2.10937064576324 4.86250245318516 1.46345256672525 2.07195182433197 -1.44136591354194 2.34682215874054 0.149481334826811 0.0189342897663756 1 1 FALSE FALSE Fusicatenibacter saccharivorans (SP63) 0.555029978899588 -0.466298796140494 0.861087214791227 1.22025932960887 0.644568830387473 -0.382130900232458 0.519206639435019 0.702364272818041 1 1 FALSE FALSE Staphylococcus caprae (SP68) -0.534617631479557 1.7129964246178 1.02766137453096 1.4557853970657 -0.520227425812871 1.17668196704716 0.602905072081892 0.239322468058853 1 1 FALSE FALSE Adlercreutzia equolifaciens (SP7) -0.245084238605504 1.13392963886969 0.892515105945409 1.26469869094309 -0.274599541198684 0.896600626686914 0.783623918859641 0.369932063551227 1 1 FALSE FALSE Ligilactobacillus murinus (SP72) -0.847272110606158 2.338305382871 0.888237582515462 1.25865032216723 -0.953880051108296 1.85778793497208 0.34014436240952 0.0631991351276468 1 1 FALSE FALSE Kosakonia sacchari (SP75) 0.550764410116206 -0.457767658573731 0.938451513821112 1.32965084015209 0.58688637825693 -0.344276591079633 0.557280018882168 0.73063828710049 1 1 FALSE FALSE Streptococcus sp._HMT_064 (SP76) 0.596204494883186 -0.548647828107691 0.980289211775654 1.38880599597483 0.608192447413807 -0.395050013967275 0.543059843177238 0.692805977748758 1 1 FALSE FALSE Granulicatella adiacens (SP82) 0.58631848634133 -0.528875811023978 1.4269834978357 2.0203868138957 0.4108796543412 -0.261769581639767 0.68116078181376 0.793499091854144 1 1 FALSE FALSE Shigella sonnei (SP83) -0.689043910631348 2.02184898292138 1.12894815617581 1.59899317767368 -0.610341499618023 1.26445128794289 0.541635611757652 0.206068094221403 1 1 FALSE FALSE Paracraurococcus ruber_nov_97.448% (SPN1006) -0.217422325159121 1.07860581197692 1.16624754337804 1.65173019008412 -0.186428967326574 0.653015739769211 0.852108377963422 0.513746131400399 1 1 FALSE FALSE Duncaniella freteri_nov_89.024% (SPN13) -0.0352876374122965 0.714336436483275 0.879980843361744 1.24697531080506 -0.0401004609117273 0.572855316615767 0.968013034344289 0.566742661243306 1 1 FALSE FALSE Turicibacter sanguinis_nov_96.137% (SPN269) -0.803173943843219 2.25010904934512 0.906530486852567 1.28451610363401 -0.885986688248955 1.75171727546222 0.375624700490042 0.0798224348430737 1 1 FALSE FALSE Corynebacterium mycetoides_nov_97.629% (SPN320) -0.25696953449644 1.15770023065156 1.0340122178293 1.46476478866132 -0.24851692278443 0.790365961561382 0.803734478208781 0.429314074905774 1 1 FALSE FALSE Rothia nasimurium_nov_97.228% (SPN341) -0.491698802466551 1.62715876659178 0.731149817685456 1.03649416330454 -0.672500752339764 1.56986775632589 0.501264961330135 0.116445880308019 1 1 FALSE FALSE Blautia faecicola_nov_93.111% (SPN415) -0.99670852508528 2.63717821182924 1.02034765620357 1.44544459433186 -0.976832277729493 1.82447547430778 0.328652193456392 0.068080220856305 1 1 FALSE FALSE Amaricoccus kaplicensis_nov_95.833% (SPN483) -0.861509773012339 2.36678070768336 1.40890594049457 1.99482637050658 -0.611474299490798 1.18645950478503 0.540885627667179 0.23544088447516 1 1 FALSE FALSE Coprococcus eutactus_nov_92.704% (SPN549) 0.35306220551997 -0.0623632493812589 0.811566854786985 1.15023271793958 0.43503773402949 -0.0542179407772114 0.663535038197196 0.956761527034231 1 1 FALSE FALSE Nocardioides terrigena_nov_95.217% (SPN594) -0.176392747488081 0.996546656634845 1.02074661779905 1.44600868302283 -0.172807574781313 0.689170589592587 0.862802682809487 0.490715922344777 1 1 FALSE FALSE Streptococcus sp._MOT-045_nov_97.764% (SPN780) -0.383785994667076 1.41133315099283 0.713950316483242 1.01216198513592 -0.537552804174832 1.39437478557674 0.590885820702506 0.163204458140702 1 1 FALSE FALSE Truepera radiovictrix_nov_90.260% (SPN802) 0.538432965715608 -0.433104769772534 0.931761646474175 1.32019178434755 0.577865560095826 -0.328062009556117 0.56335488868366 0.74286477775539 1 1 FALSE FALSE Blautia luti_nov_96.429% (SPN807) 1.01780452655328 -1.39184789144787 0.995588055951423 1.41043709093187 1.02231492279266 -0.986820256214539 0.306631872557418 0.323730762629437 1 1 FALSE FALSE Muribaculaceae_[G-2] bacterium_MOT-104_nov_86.228% (SPN827) 0.666411908656602 -0.689062655654522 0.868463532729012 1.23068967222248 0.767345874112303 -0.559899600368104 0.442875900347401 0.575547921366403 1 1 FALSE FALSE Fusicatenibacter saccharivorans_nov_97.689% (SPN839) 1.06697378663793 -1.49018641161719 0.970666997114247 1.37520105129503 1.09921712575992 -1.08361349070659 0.271673370487018 0.278536206728962 1 1 FALSE FALSE Streptococcus parasanguinis_parasanguinis_clade_721 (SPP10) 1.35313241759227 -2.06250367352587 1.26890592857873 1.79687815940618 1.06637725233729 -1.14782611315587 0.286253140448402 0.251040354983467 1 1 FALSE FALSE Staphylococcus capitis_epidermidis (SPP14) -0.985981396705904 2.61572395507049 1.27072019256333 1.799443350353 -0.775923293323098 1.45362950967996 0.43779427826243 0.146049050896707 1 1 FALSE FALSE Staphylococcus pettenkoferi_pseudolugdunensis (SPP17) 0.0456463989959324 0.552468363666817 0.971162148726376 1.37590115228646 0.0470018308021941 0.40153201612538 0.962511768373943 0.688028471305878 1 1 FALSE FALSE Staphylococcus saprophyticus_xylosus (SPP19) 1.87589967417214 -3.1080381866856 0.930012548042977 1.3177186615417 2.01706920849572 -2.3586508087009 0.0436882914145441 0.0183415055564622 1 1 FALSE FALSE Staphylococcus argenteus_aureus_roterodami (SPP2) 1.23299917578853 -1.82223718991837 1.39955621271388 1.98160651536631 0.880992963760717 -0.919575695673124 0.37832162837494 0.357794532321291 1 1 FALSE FALSE Veillonella dispar_parvula (SPP21) 1.98031552573513 -3.31686988981158 1.15859244738578 1.64090676158473 1.70924256428865 -2.02136402107836 0.087406027479089 0.0432420962964065 1 1 FALSE FALSE