Taxon F19489.S01 F19489.S02 F19489.S03 F19489.S04 F19489.S05 F19489.S06 F19489.S07 F19489.S08 F19489.S09 F19489.S10 F19489.S11 F19489.S12 Bacteroides intestinalis (SP10) 14 0 0 0 0 147 0 0 0 0 0 0 Bacteroides thetaiotaomicron (SP107) 4 0 13 0 60 228 0 0 0 0 0 0 Haemophilus parainfluenzae (SP11) 6331 16777 12023 14150 28771 13574 2711 40967 2364 774 8305 46522 Kosakonia sacchari (SP115) 8 0 13 48 5 1413 0 0 0 0 0 0 Corynebacterium marinum (SP119) 0 8 0 0 0 0 49 0 0 471 0 0 Clostridium disporicum (SP12) 24 0 4 2 0 50 0 0 43 0 0 0 Corynebacterium amycolatum (SP129) 33 0 281 351 95 475 137 0 0 1935 853 0 Enterococcus avium (SP13) 114 12 24 0 1868 423 63 0 0 0 379 0 Odoribacter laneus (SP138) 0 0 9 0 0 9 0 0 0 0 0 0 Collinsella aerofaciens (SP14) 37 0 1515 670 398 7941 1160 1075 3845 4082 12965 0 Erysipelatoclostridium [Clostridium] saccharogumia (SP147) 25 0 0 0 12 150 0 0 0 0 1039 0 Phocaeicola vulgatus (SP15) 32 0 54 29 148 1900 155 0 17 7 106 0 Enterobacter cancerogenus (SP17) 0 23 43 87 0 3099 0 0 0 0 0 723 Shigella sonnei (SP18) 81 427 70 144 469 87 76 0 29 0 464 0 Shigella flexneri (SP19) 30 412 73 110 95 52 0 0 3 378 0 3673 Escherichia coli (SP22) 114 1218 219 375 340 92 0 0 52 64 190 5146 Ligilactobacillus murinus (SP23) 16363 3305 7087 4781 3640 3513 8346 32822 2382 15205 22399 11970 Blautia glucerasea (SP25) 59 0 258 92 11 1368 1514 19513 518 0 1660 0 Cutibacterium acnes (SP27) 3 0 0 0 0 0 25 2986 34 1637 178 2292 Granulicatella adiacens (SP31) 40 98 3066 561 2151 331 0 0 575 1812 0 0 Bacteroides xylanisolvens (SP36) 0 0 7 0 13 283 30 0 0 0 0 0 Bifidobacterium pseudolongum (SP37) 4475 305 1556 419 1029 22568 31456 29580 2105 5492 89048 32639 Longicatena caecimuris (SP4) 9 0 26 0 26 881 0 0 24 0 3527 0 Lactobacillus intestinalis (SP41) 1257 35 299 90 139 4359 9074 10632 624 21494 20024 23553 Shigella dysenteriae (SP42) 108 920 166 262 210 54 0 2963 33 0 0 0 Rothia aerolata (SP44) 0 0 0 0 0 0 0 40550 0 0 0 4400 Eisenbergiella massiliensis (SP45) 0 0 0 0 4 281 0 0 23 0 0 0 Staphylococcus ureilyticus (SP5) 14 37 35 1432 19 113 0 0 0 17736 0 0 Fusicatenibacter saccharivorans (SP53) 0 0 39 12 22 958 41 0 348 403 3112 0 Parasutterella excrementihominis (SP54) 20 0 33 23 37 196 236 171 9 0 701 0 Streptococcus agalactiae (SP58) 893 550 3362 403 702 1523 36 0 212 3886 1363 6750 Veillonella parvula (SP61) 1636 325 1190 1785 1466 1496 11537 0 1722 321 1498 0 Enterococcus faecalis (SP64) 120 1603 111 116 110 268 0 0 54 83 0 1361 Bilophila wadsworthia (SP66) 0 0 0 0 11 6 0 0 0 0 0 0 Streptococcus sp._HMT_064 (SP69) 0 0 94 0 3899 0 0 0 0 0 7356 0 Streptococcus mutans (SP7) 95483 36236 82742 84179 37877 64996 194838 12812 267575 112034 22099 33743 Mammaliicoccus sciuri (SP75) 7 0 0 2427 0 969 432 0 0 1722 0 15818 Alistipes finegoldii (SP79) 0 0 8 6 0 43 0 0 13 0 170 0 Romboutsia ilealis (SP8) 122 16 75 19 12 322 187 0 0 0 777 0 Parabacteroides goldsteinii (SP80) 8 0 41 13 11 198 15 0 0 0 0 0 Staphylococcus haemolyticus (SP83) 0 181 32 15 177 1331 0 0 0 0 0 0 Akkermansia muciniphila (SP87) 103 11 131 39 72 3646 240 0 118 0 4560 2343 Adlercreutzia equolifaciens (SP91) 14 0 8 4 2 102 18 0 0 0 172 0 Monoglobus pectinilyticus (SP93) 0 0 0 4 0 274 0 0 0 0 309 0 Bacteroides uniformis (SP99) 16 0 35 19 64 725 172 0 25 0 364 0 Rothia nasimurium_nov_97.228% (SPN110) 137022 145191 101024 70084 120552 85707 17832 106748 9713 48779 33120 50473 Streptococcus sp._MOT-045_nov_97.764% (SPN12) 49880 61648 59333 35970 47089 35843 5882 99275 2862 39865 51758 30512 Blautia luti_nov_96.008% (SPN132) 0 0 98 15 62 6927 0 0 413 0 11343 3391 Frisingicoccus caecimuris_nov_96.451% (SPN133) 0 0 0 0 0 27 41 0 0 0 0 0 Blautia glucerasea_nov_97.899% (SPN144) 0 0 30 5 5 136 0 0 68 0 171 0 Turicibacter sanguinis_nov_96.137% (SPN164) 35 0 14 3 0 93 135 0 35 0 0 0 Eubacterium coprostanoligenes_nov_91.379% (SPN180) 0 0 0 0 0 132 28 0 0 0 0 0 Coprococcus eutactus_nov_92.704% (SPN202) 0 0 8 0 0 0 0 0 39 0 0 0 Agathobaculum desmolans_nov_86.345% (SPN213) 0 0 3 0 0 24 0 0 17 0 0 0 Butyricicoccus pullicaecorum_nov_87.216% (SPN218) 0 0 15 4 13 410 103 0 100 0 428 0 Oscillospiraceae_[G-6] bacterium_MOT-153_nov_97.831% (SPN226) 0 0 5 0 0 0 110 0 0 0 0 0 Longibaculum muris_nov_92.754% (SPN238) 3 0 0 0 0 12 54 0 0 0 299 0 Gluceribacter canis_nov_95.388% (SPN25) 0 0 21 0 0 43 0 0 0 0 0 0 Blautia faecicola_nov_93.111% (SPN250) 7 3 10 8 0 30 274 0 0 0 0 0 Ruminococcus albus_nov_91.045% (SPN284) 0 0 52 6 0 125 0 0 131 0 554 0 Barnesiella viscericola_nov_90.447% (SPN309) 0 0 0 4 0 7 0 0 0 0 0 0 Oscillospiraceae_[G-1] bacterium_MOT-147_nov_95.218% (SPN334) 9 0 5 0 0 35 15 0 0 0 0 0 Erysipelatoclostridium [Clostridium] saccharogumia_nov_96.042% (SPN355) 6 0 7 0 3 41 0 0 21 0 0 0 Anaerostipes hadrus_nov_92.754% (SPN36) 0 0 0 0 0 95 0 0 0 0 346 0 Fusicatenibacter saccharivorans_nov_97.479% (SPN364) 0 0 94 37 9 1121 43 0 986 0 3282 0 Faecalimonas umbilicata_nov_96.033% (SPN365) 0 0 0 0 0 28 0 0 38 0 0 0 Lachnospiraceae_[G-4] bacterium_MOT-169_nov_97.065% (SPN478) 0 0 90 22 34 1428 0 0 296 0 3502 3932 Mediterraneibacter [Ruminococcus] gnavus_nov_94.990% (SPN489) 0 0 6 0 0 16 0 0 0 0 0 0 Caproiciproducens galactitolivorans_nov_91.083% (SPN519) 0 0 0 0 0 6 162 0 0 0 0 0 Lachnospira multipara_nov_84.298% (SPN531) 0 0 4 0 0 4 55 0 0 0 0 0 Muribaculaceae_[G-2] bacterium_MOT-104_nov_86.228% (SPN580) 8 0 134 28 31 918 204 0 65 0 599 0 Eubacterium coprostanoligenes_nov_91.845% (SPN582) 7 0 7 0 0 0 32 0 0 0 0 0 Blautia schinkii_nov_94.340% (SPN59) 0 0 24 11 14 112 0 0 53 0 0 0 Duncaniella freteri_nov_89.024% (SPN592) 36 0 50 9 11 319 162 0 28 0 0 0 Alistipes finegoldii_nov_94.835% (SPN603) 6 0 17 0 0 61 0 0 0 0 0 0 Blautia producta_nov_96.017% (SPN616) 0 0 6 0 0 264 0 0 90 0 475 0 Chryseobacterium culicis_nov_97.280% (SPN639) 5 8 88 73 0 617 0 0 0 0 0 2728 Blautia producta_nov_95.178% (SPN83) 0 0 0 0 0 73 0 0 0 0 386 0 Staphylococcus argenteus_aureus_roterodami (SPP4) 3268 6381 765 887 1384 13297 588 0 0 7424 529 17620 Streptococcus parasanguinis_parasanguinis_clade_721 (SPP5) 1846 2387 6826 4763 451 2106 2852 26742 3631 4903 2981 44261 Veillonella dispar_parvula (SPP7) 3741 1124 2768 4529 3951 3795 29001 1137 3999 0 3934 11566 Staphylococcus saprophyticus_xylosus (SPP8) 0 0 332 32 17 0 0 0 19 1108 0 0