taxon lfc_(Intercept) lfc_GroupRat dental plaque se_(Intercept) se_GroupRat dental plaque W_(Intercept) W_GroupRat dental plaque p_(Intercept) p_GroupRat dental plaque q_(Intercept) q_GroupRat dental plaque diff_(Intercept) diff_GroupRat dental plaque Bacteroides intestinalis (SP10) 0.272567950759974 -0.701528080045425 0.660521466251856 0.935684348780332 0.412655704146403 -0.749748652908291 0.67985888288249 0.453406099056942 1 1 FALSE FALSE Bacteroides thetaiotaomicron (SP107) 0.759688283540305 -1.67576874560609 0.692666658906688 0.981133825349031 1.0967588431922 -1.70799202138398 0.272746825955598 0.0876378229299586 1 1 FALSE FALSE Haemophilus parainfluenzae (SP11) 0.0116511369616347 -0.179694452448747 0.543174583440052 0.769763350297387 0.0214500775935524 -0.233441163936065 0.982886626597285 0.815418851784111 1 1 FALSE FALSE Kosakonia sacchari (SP115) 1.08498547482447 -2.32636312817441 0.77223628947875 1.09363594376718 1.40499156748619 -2.12718239687782 0.160023785799039 0.0334049311540049 1 1 FALSE FALSE Corynebacterium marinum (SP119) -1.02715927981013 1.89792638109478 0.872842812990569 1.23588398384737 -1.17679754535737 1.53568328896571 0.239276322591926 0.124616075560829 1 1 FALSE FALSE Clostridium disporicum (SP12) 0.0874703128740048 -0.331332804273486 0.707383872825727 1.00194218675833 0.123653247174825 -0.330690541482714 0.901589830812365 0.740878247527551 1 1 FALSE FALSE Corynebacterium amycolatum (SP129) 0.17646354698694 -0.509319272499358 1.30211516197089 1.84286970844363 0.135520691364843 -0.276372914572185 0.892200205823757 0.782261657901142 1 1 FALSE FALSE Enterococcus avium (SP13) 0.794984107301437 -1.74636039312835 1.15423359429588 1.63376125790313 0.688754955002332 -1.06892018933644 0.490977486680305 0.285105633748763 1 1 FALSE FALSE Odoribacter laneus (SP138) 0.00298122061651117 -0.162354619758499 0.550721721878579 0.780435243104192 0.00541329767480726 -0.208030866356998 0.995680834456906 0.835204866668637 1 1 FALSE FALSE Collinsella aerofaciens (SP14) -1.0021827346722 1.84797329081893 1.40569310886716 1.98933441215265 -0.712945612630809 0.928940493629346 0.475879412602287 0.352919925918412 1 1 FALSE FALSE Erysipelatoclostridium [Clostridium] saccharogumia (SP147) -0.0491892274684231 -0.0580137235886305 1.08315788335936 1.53326026634317 -0.0454127955158904 -0.0378368401386891 0.963778282163587 0.969817771208495 1 1 FALSE FALSE Phocaeicola vulgatus (SP15) 0.377014583904331 -0.91042134633414 1.01087123917919 1.43104851247457 0.372960046039553 -0.636191812085979 0.709178180583482 0.524651409269336 1 1 FALSE FALSE Enterobacter cancerogenus (SP17) 0.704946123219331 -1.56628442496414 1.23032038476689 1.74134936226474 0.572977682843887 -0.899465930792362 0.566659804725804 0.36840453487403 1 1 FALSE FALSE Shigella sonnei (SP18) 1.00745536390449 -2.17130290633446 0.86984966321218 1.23165190787265 1.15819480826625 -1.76291928949698 0.246784546537674 0.0779141031924052 1 1 FALSE FALSE Shigella flexneri (SP19) 0.609778009229399 -1.37594819698427 1.13355945204014 1.6045278975291 0.537932093576513 -0.857540837465755 0.59062393067352 0.391146055725013 1 1 FALSE FALSE Escherichia coli (SP22) 0.603841289407743 -1.36407475734096 1.04269631195178 1.47604828253566 0.579115205919771 -0.924139659576485 0.562511440481603 0.3554136068845 1 1 FALSE FALSE Ligilactobacillus murinus (SP23) -0.75755962268216 1.35872706683884 0.544647833072514 0.771846585884999 -1.39091643568753 1.76035897765995 0.164250768237958 0.078346960160096 1 1 FALSE FALSE Blautia glucerasea (SP25) -0.954440273093295 1.75248836766111 1.46572421160666 2.07422244602758 -0.651173164457097 0.844889308288686 0.51493471125863 0.398172644513455 1 1 FALSE FALSE Cutibacterium acnes (SP27) -3.19388106264063 6.23136994675578 0.691176610941355 0.979027077493613 -4.62093336504933 6.3648596550655 3.82017469831628e-06 1.95468382919148e-10 0.000313254325261935 1.60284073993702e-08 TRUE TRUE Granulicatella adiacens (SP31) 1.4910226973091 -3.13843757314367 1.20960314800456 1.71205467392217 1.23265444519451 -1.83314097437892 0.217704714648232 0.0667816090465395 1 1 FALSE FALSE Bacteroides xylanisolvens (SP36) 0.199702876268636 -0.555797931062748 0.817597363911115 1.15777179034409 0.244255773175837 -0.480058277199488 0.807032734082162 0.631185954731873 1 1 FALSE FALSE Bifidobacterium pseudolongum (SP37) -1.54901972996037 2.94164728139527 0.662056401356278 0.937854568777923 -2.33970961807344 3.13657082806389 0.019298738319443 0.00170936143262753 1 0.136748914610202 FALSE FALSE Longicatena caecimuris (SP4) -0.0175379990452449 -0.121316180434987 1.26886734729254 1.79585598714878 -0.01382177505211 -0.0675534014437296 0.988972170212943 0.946141150872531 1 1 FALSE FALSE Lactobacillus intestinalis (SP41) -2.07669041295584 3.99698864738621 0.70421318835816 0.997459221996061 -2.94895132225164 4.00716997672111 0.00318854193987147 6.14506394175654e-05 0.258271897129589 0.00497750179282279 FALSE TRUE Shigella dysenteriae (SP42) 1.30614909585436 -2.7686903702342 1.04912442490638 1.48513749383611 1.24498969316334 -1.86426535032974 0.213135538886122 0.0622844501522653 1 1 FALSE FALSE Rothia aerolata (SP44) -1.94652711556035 3.73666205259523 1.49350047780984 2.11350015854206 -1.30333210098122 1.76799705336803 0.192461406296777 0.0770613962692803 1 1 FALSE FALSE Eisenbergiella massiliensis (SP45) -0.039126641062485 -0.0781388964005069 0.806280477319418 1.1417708321593 -0.0485273328117363 -0.0684365848203809 0.961295981663639 0.945438099609822 1 1 FALSE FALSE Staphylococcus ureilyticus (SP5) 0.883495932548152 -1.92338404362178 1.31513401857831 1.8612789476435 0.671791558934221 -1.03336689326278 0.501716403230995 0.301432233538616 1 1 FALSE FALSE Fusicatenibacter saccharivorans (SP53) -0.988503997812603 1.82061581709973 1.27916304597163 1.81041448617037 -0.772774042312765 1.0056348040779 0.439656118180951 0.314591275388386 1 1 FALSE FALSE Parasutterella excrementihominis (SP54) -0.433094642529086 0.709797106532694 1.02982808113132 1.45785292322207 -0.420550430177926 0.486878405377093 0.6740833969967 0.62634450305104 1 1 FALSE FALSE Streptococcus agalactiae (SP58) 0.292287243836359 -0.740966666198195 1.04774831972753 1.48319171011832 0.278967036580283 -0.499575787231903 0.780270121900884 0.617373810337106 1 1 FALSE FALSE Veillonella parvula (SP61) 0.675583500033027 -1.50755917859153 1.2375689813654 1.75159908175243 0.545895631035985 -0.860675935661747 0.585137681729974 0.389416550403614 1 1 FALSE FALSE Enterococcus faecalis (SP64) 0.994936455818911 -2.1462650901633 0.995365275564826 1.409123625675 0.999569183538504 -1.52312050629 0.317519042716008 0.127728559363525 1 1 FALSE FALSE Bilophila wadsworthia (SP66) -0.0140849804373233 -0.12822221765083 0.543442704590901 0.770142485159413 -0.0259180596562178 -0.166491552046099 0.979322695362397 0.867770130881524 1 1 FALSE FALSE Streptococcus sp._HMT_064 (SP69) -0.0375146601454933 -0.0813628582344907 1.52193121365764 2.15370346080479 -0.0246493795572632 -0.0377781155647524 0.980334632057806 0.969864593163634 1 1 FALSE FALSE Streptococcus mutans (SP7) -0.358115741048739 0.559839303572002 0.402272331609862 0.570424324632012 -0.89023209629056 0.981443601538488 0.373341273728113 0.326374033604843 1 1 FALSE FALSE Mammaliicoccus sciuri (SP75) -0.910888302076065 1.66538442562665 1.70673177045181 2.4150286606313 -0.533703255453511 0.689591992333255 0.593546856488073 0.490450804515385 1 1 FALSE FALSE Alistipes finegoldii (SP79) -0.368918431265387 0.581444684005298 0.821603328976 1.16343583821794 -0.44902256144116 0.499765148111569 0.653415381394638 0.617240453573671 1 1 FALSE FALSE Romboutsia ilealis (SP8) 0.571064298375971 -1.29852077527742 1.0331963013989 1.46261549823959 0.552716165943273 -0.887807340234205 0.580457781881632 0.374644393860005 1 1 FALSE FALSE Parabacteroides goldsteinii (SP80) 0.748116713413506 -1.65262560535249 0.652609733281616 0.924498065654877 1.14634623920124 -1.78759228033845 0.251651917708602 0.07384181185081 1 1 FALSE FALSE Staphylococcus haemolyticus (SP83) 1.6152870149052 -3.38696620833588 0.774688230128072 1.09710271850605 2.08508010330576 -3.08719151926629 0.0370620299992255 0.00202057368655915 1 0.159625321238173 FALSE FALSE Akkermansia muciniphila (SP87) -0.228735674290394 0.30107917005531 1.26164976122898 1.78565006695918 -0.181298868608021 0.168610398882925 0.856132994033729 0.86610310055371 1 1 FALSE FALSE Adlercreutzia equolifaciens (SP91) -0.0811356263103938 0.00587907409531033 0.84755318886662 1.20012655996249 -0.0957292443426369 0.00489871176211122 0.92373561393025 0.996091409149849 1 1 FALSE FALSE Monoglobus pectinilyticus (SP93) -0.257716109722008 0.359040040918538 0.996763852236928 1.41110116070171 -0.25855282486784 0.25443961844663 0.795980286007755 0.799155946718061 1 1 FALSE FALSE Bacteroides uniformis (SP99) 0.116269318709773 -0.388930815945024 1.06574220312947 1.508634726893 0.109097039010332 -0.257803170649544 0.91312552340012 0.796558817361887 1 1 FALSE FALSE Rothia nasimurium_nov_97.228% (SPN110) 0.209481580872054 -0.575355340269585 0.5040306081191 0.714408879133141 0.415612816955263 -0.805358607759351 0.677693346370021 0.420612770392856 1 1 FALSE FALSE Streptococcus sp._MOT-045_nov_97.764% (SPN12) 0.0248263265127861 -0.206044831551049 0.431762896080878 0.612177667287146 0.057499907329081 -0.336576851070267 0.954146979928787 0.73643590919886 1 1 FALSE FALSE Blautia luti_nov_96.008% (SPN132) -0.632002014339962 1.10761185015445 1.65882858189415 2.34728868614452 -0.380992961682817 0.471868610236318 0.703208471154124 0.637020574613991 1 1 FALSE FALSE Frisingicoccus caecimuris_nov_96.451% (SPN133) -0.39803414233119 0.639676106136904 0.636797824573422 0.902141765867728 -0.625055750775885 0.709063841558903 0.531934468277672 0.478284860175208 1 1 FALSE FALSE Blautia glucerasea_nov_97.899% (SPN144) -0.182259806390555 0.208127434255634 0.957193987813239 1.35515110124035 -0.19041052149412 0.153582455908523 0.848987453539473 0.877938970958729 1 1 FALSE FALSE Turicibacter sanguinis_nov_96.137% (SPN164) -0.0828066811896765 0.00922118385387542 0.903571707202769 1.27933237578305 -0.0916437295785026 0.00720780934526992 0.926981106437041 0.994249050002295 1 1 FALSE FALSE Eubacterium coprostanoligenes_nov_91.379% (SPN180) -0.234006424571928 0.31162067061838 0.752428031421822 1.06562929563984 -0.311001736777056 0.292428776023159 0.755799301304726 0.769958809205279 1 1 FALSE FALSE Coprococcus eutactus_nov_92.704% (SPN202) -0.495232884310343 0.834073590095209 0.542162886174001 0.768332764631686 -0.913439294609709 1.08556295981343 0.361011547048746 0.277672394664053 1 1 FALSE FALSE Agathobaculum desmolans_nov_86.345% (SPN213) -0.242935144359539 0.329478110193601 0.545078402934682 0.772455428064563 -0.445688442344413 0.426533490766101 0.655822314363273 0.669719149549379 1 1 FALSE FALSE Butyricicoccus pullicaecorum_nov_87.216% (SPN218) -0.58185381647432 1.00731545442316 1.1069337005936 1.56687909557367 -0.525644685099297 0.642880141338769 0.599135103300001 0.520301876117189 1 1 FALSE FALSE Oscillospiraceae_[G-6] bacterium_MOT-153_nov_97.831% (SPN226) -0.620809746719385 1.08522731491329 0.637191770883616 0.902698764094742 -0.974290276628159 1.20220316907335 0.329912431135784 0.229284821800706 1 1 FALSE FALSE Longibaculum muris_nov_92.754% (SPN238) -0.87204859906443 1.58770501960338 0.853801496904941 1.20896112752373 -1.02137159776088 1.31328045497659 0.307078416462176 0.18908846202719 1 1 FALSE FALSE Gluceribacter canis_nov_95.388% (SPN25) 0.20392067051189 -0.564233519549257 0.55846415424282 0.791383117090952 0.365145495843634 -0.712971388148037 0.715002801282538 0.475863462283232 1 1 FALSE FALSE Blautia faecicola_nov_93.111% (SPN250) 0.0713286533664239 -0.299049485258324 0.797386553751412 1.12919573121819 0.0894530426063102 -0.264834055771453 0.928721870484343 0.791137300588623 1 1 FALSE FALSE Ruminococcus albus_nov_91.045% (SPN284) -0.414976632675913 0.673561086826349 1.11225160482705 1.57439859448981 -0.373096007121913 0.427821194190419 0.709076990336546 0.668781305225295 1 1 FALSE FALSE Barnesiella viscericola_nov_90.447% (SPN309) -0.0855391664249252 0.0146861543243735 0.5015002020339 0.710830289694939 -0.170566564236684 0.0206605634808785 0.864564590468952 0.983516428082645 1 1 FALSE FALSE Oscillospiraceae_[G-1] bacterium_MOT-147_nov_95.218% (SPN334) 0.0246071535736015 -0.20560648567268 0.583126041696693 0.826254343266274 0.0421986874432897 -0.248841639802939 0.966340308898458 0.803483280065914 1 1 FALSE FALSE Erysipelatoclostridium [Clostridium] saccharogumia_nov_96.042% (SPN355) 0.0955547523881713 -0.34750168330182 0.589722358092438 0.83558116294859 0.162033457061489 -0.415880226494766 0.871279507070269 0.677497649398575 1 1 FALSE FALSE Anaerostipes hadrus_nov_92.754% (SPN36) -0.470936365894291 0.785480553263105 0.932543801949817 1.3202970787115 -0.505001872201209 0.594927131119358 0.613557521012083 0.551892180748293 1 1 FALSE FALSE Fusicatenibacter saccharivorans_nov_97.479% (SPN364) -0.478027129491494 0.799662080457512 1.392517619991 1.97070346274767 -0.343282643342483 0.405774940559842 0.731385836975459 0.684907972974115 1 1 FALSE FALSE Faecalimonas umbilicata_nov_96.033% (SPN365) -0.388671346402124 0.620950514278771 0.632828762497787 0.896529928862843 -0.614180911859997 0.692615488103541 0.539095785530302 0.488550887972717 1 1 FALSE FALSE Lachnospiraceae_[G-4] bacterium_MOT-169_nov_97.065% (SPN478) -0.675482013708913 1.19457184889235 1.50384883937488 2.12813354389513 -0.44916882337037 0.561323725345693 0.653309875774156 0.574576870624372 1 1 FALSE FALSE Mediterraneibacter [Ruminococcus] gnavus_nov_94.990% (SPN489) 0.0171394736827943 -0.190671125891065 0.568089081032794 0.804992647395431 0.0301703980151044 -0.236860704887163 0.975931156741648 0.812764855533068 1 1 FALSE FALSE Caproiciproducens galactitolivorans_nov_91.083% (SPN519) -0.63787594777322 1.11935971702096 0.6894816640204 0.976630627133178 -0.925152880866672 1.14614439269302 0.354886389367372 0.251735411897382 1 1 FALSE FALSE Lachnospira multipara_nov_84.298% (SPN531) -0.46611824752225 0.775844316519023 0.56281949243573 0.797541539448959 -0.828184264736491 0.972794867907536 0.407566153731421 0.330655263881495 1 1 FALSE FALSE Muribaculaceae_[G-2] bacterium_MOT-104_nov_86.228% (SPN580) 0.0266022564818319 -0.20959669148914 1.15522864465488 1.63516826786956 0.0230276981140639 -0.128180503259289 0.98162817890418 0.898006128927293 1 1 FALSE FALSE Eubacterium coprostanoligenes_nov_91.845% (SPN582) -0.327715842663617 0.499039506801757 0.547078693170736 0.775283906972717 -0.599028707852348 0.6436861417005 0.549153740935496 0.51977897821845 1 1 FALSE FALSE Blautia schinkii_nov_94.340% (SPN59) 0.38371157360252 -0.923815325730517 0.767188717337263 1.0864992359566 0.500152785007443 -0.850267809822388 0.616967500954323 0.395176209026927 1 1 FALSE FALSE Duncaniella freteri_nov_89.024% (SPN592) 0.423114795343484 -1.00262176921244 0.915232815517703 1.29582040825219 0.462302911532021 -0.773735127821286 0.643864112007709 0.43908744227364 1 1 FALSE FALSE Alistipes finegoldii_nov_94.835% (SPN603) 0.364764347515273 -0.885920873556023 0.553531595802214 0.784408450721576 0.658976561196354 -1.12941270933665 0.509910820026571 0.258723773913256 1 1 FALSE FALSE Blautia producta_nov_96.017% (SPN616) -0.637840867438737 1.119289556352 1.09803741374438 1.55429979319435 -0.580891743263698 0.720124625411979 0.561313417476843 0.47144826682087 1 1 FALSE FALSE Chryseobacterium culicis_nov_97.280% (SPN639) 0.550962183950688 -1.25831654642685 1.21195547295885 1.71538091486721 0.454605962218707 -0.733549344942 0.649392744630561 0.463223443199562 1 1 FALSE FALSE Blautia producta_nov_95.178% (SPN83) -0.502004369632562 0.847616560739647 0.92413181965897 1.3084030401992 -0.543217275883667 0.647825276079001 0.586980213206546 0.517097965261678 1 1 FALSE FALSE Staphylococcus argenteus_aureus_roterodami (SPP4) 0.942759014669271 -2.04191020786402 1.33974556420642 1.89608085444716 0.703685117425789 -1.07691093608947 0.481628890577637 0.281520056913726 1 1 FALSE FALSE Streptococcus parasanguinis_parasanguinis_clade_721 (SPP5) -0.961789245081245 1.76718631163701 0.480494292403662 0.681121111351743 -2.00166632629478 2.594525822478 0.0453206303395734 0.00947214979796698 1 0.738827684241424 FALSE FALSE Veillonella dispar_parvula (SPP7) 0.0435093722220947 -0.243410922969666 1.13860165511389 1.6116575923027 0.0382129887363836 -0.151031412709622 0.969517864946336 0.879950936357154 1 1 FALSE FALSE Staphylococcus saprophyticus_xylosus (SPP8) -0.184111761497962 0.211831344470447 1.14614519812591 1.62232420409579 -0.16063563482097 0.130572757242756 0.872380386820647 0.896113294755784 1 1 FALSE FALSE