taxon lfc_(Intercept) lfc_GroupM3 se_(Intercept) se_GroupM3 W_(Intercept) W_GroupM3 p_(Intercept) p_GroupM3 q_(Intercept) q_GroupM3 diff_(Intercept) diff_GroupM3 passed_ss_(Intercept) passed_ss_GroupM3 Roseburia faecis (SP1005) 0.615205664386388 -1.36969614835012 0.494188316048085 0.775494336432111 1.24488103908658 -1.76622327720897 0.248405077145191 0.115348128633183 1 1 FALSE FALSE TRUE TRUE Subdoligranulum variabile (SP1036) 0.548796231045018 -2.1179480851764 0.727130462021652 0.817952637723666 0.754742456421356 -2.5893285105976 0.588406614462087 0.234628737812551 1 1 FALSE FALSE TRUE TRUE Faecalibaculum rodentium (SP105) -0.228027705001083 0.489847766762486 0.561046318227728 0.739093649267243 -0.406432940726521 0.662768198925987 0.693919178568289 0.524087721214385 1 1 FALSE FALSE TRUE TRUE Uruburuella testudinis (SP1148) 0.0279526740059853 0.0205504052495276 0.335156481880119 0.445550095888568 0.0834018600779547 0.0461236692330715 0.935357592502572 0.964218908357781 1 1 FALSE FALSE TRUE TRUE Streptococcus entericus (SP1171) 0.253373292023175 -0.392720727781988 0.326633284068794 0.460298779055185 0.775711797851597 -0.853186551109459 0.45781720350834 0.415684412606632 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-14] bacterium_MOT-184 (SP119) 0.422826289639974 -0.833764571192423 0.296885691286732 0.501365762627019 1.42420568605851 -1.66298665234683 0.24958609938262 0.194902219060467 1 1 FALSE FALSE TRUE TRUE Eubacteriales_[G-4] bacterium_MOT-164 (SP120) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Prevotella stercorea (SP130) 2.75822790953935 -5.74298238336142 4.85336017654139e-06 0.297739916307762 568313.04688063 -19.2885873502602 1 1 1 1 FALSE FALSE TRUE TRUE Nitrincola lacisaponensis (SP1395) -0.0960291345910822 0.247850387677483 0.309577099847063 0.454047627404999 -0.310194567487461 0.545868699048188 0.763475785977068 0.598423864083159 1 1 FALSE FALSE TRUE TRUE Streptococcus pseudoporcinus (SP1532) 0.150461490358578 -0.204049091396893 0.208104958081528 0.45697206278494 0.72300771565295 -0.446524214529331 0.488037785941113 0.665769071828163 1 1 FALSE FALSE TRUE TRUE Austwickia chelonae (SP1660) 0.160747998055603 -0.222907688841439 0.250996827868593 0.443209199486163 0.640438364981094 -0.502940121955654 0.537849761805162 0.627083263452079 1 1 FALSE FALSE TRUE TRUE Mesonia hippocampi (SP1789) -0.00303550419402295 0.0773620652828755 0.273291841152437 0.388403911977006 -0.0111071892275401 0.199179418376855 0.991380242609159 0.846549559413844 1 1 FALSE FALSE TRUE TRUE Lachnoclostridium [Clostridium] scindens (SP18) 0.364358358309431 -1.07825786985792 0.125747758828478 0.447967453363392 2.89753361573961 -2.40700046791844 0.0274225692601086 0.0527890682561156 1 1 FALSE FALSE FALSE TRUE Eubacteriales_[G-1] bacterium_MOT-159 (SP215) -0.941999087280252 1.35054723581219 0.353094246460017 0.58712479567683 -2.6678403761159 2.30027286491162 0.0444635384311777 0.0697487066217364 1 1 FALSE FALSE FALSE TRUE Cutibacterium acnes (SP216) -0.212599763891717 -0.203064746916888 0.364140172243817 0.538512965006864 -0.583840455123877 -0.377084230301307 0.584672939501485 0.721585454875653 1 1 FALSE FALSE TRUE TRUE Epilithonimonas hominis (SP233) -0.0834239399813012 0.15598580458071 0.250287648823792 0.400642040837396 -0.333312252415754 0.38933958167415 0.747466306951897 0.707183942240227 1 1 FALSE FALSE TRUE TRUE Rodentibacter heylii (SP238) 1.41685044607371 -2.02482958661668 4.85336017654139e-06 0.352628793078868 291931.856391377 -5.74209941547175 1.1733755165852e-11 0.0290154940976021 9.50434168434014e-10 1 TRUE FALSE FALSE FALSE Eubacteriales_[G-4] bacterium_MOT-165 (SP285) -0.656069929007742 0.813235352969224 0.340783300958159 0.466699851166417 -1.92518215289045 1.74252327472725 0.126514656380879 0.156376211927453 1 1 FALSE FALSE TRUE TRUE Mollicutes_[G-1] bacterium_MOT-186 (SP366) -0.308081327153606 0.483764521137895 0.35650786526852 0.720103548869212 -0.864164180281299 0.671798551607691 0.420697262883878 0.526718189462274 1 1 FALSE FALSE TRUE FALSE Oceanotoga teriensis (SP367) 0.0524829191221411 -0.0244217107967587 0.342075115675455 0.471347778748834 0.153425130087318 -0.0518125085082287 0.881447989192214 0.959809855150218 1 1 FALSE FALSE TRUE TRUE Prevotella copri (SP385) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Streptococcus danieliae (SP391) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Erysipelatoclostridium [Clostridium] saccharogumia (SP417) -1.26689412400369 1.89411693890154 0.211501332426931 0.741047413176417 -5.99000540311666 2.55599966374975 0.009316322769978 0.0835047217801168 0.717356853288306 1 FALSE FALSE FALSE TRUE Lachnoclostridium pacaense (SP425) 0.0111460968954038 -1.18841272474021 0.663904956497452 0.754054806683128 0.0167886936018779 -1.57602963896975 0.98740921912906 0.190145562828501 1 1 FALSE FALSE TRUE TRUE Acutalibacter muris (SP479) 0.139533125041056 -0.52183099894598 0.424257591685572 0.533740617682277 0.328887750686303 -0.97768650475204 0.758739372458264 0.383587897991861 1 1 FALSE FALSE TRUE TRUE Pasteurella testudinis (SP496) 0.10988037300446 -0.129650376247677 0.248517545483653 0.37117018647269 0.442143321473001 -0.349301697638414 0.668819372612991 0.734896379869879 1 1 FALSE FALSE TRUE TRUE Faecalibacterium prausnitzii (SP52) -0.176625787912068 -0.284223243993522 0.819043777479813 0.903681553234351 -0.215648775765739 -0.314517036423133 0.84925578440972 0.782906844159025 1 1 FALSE FALSE TRUE TRUE Turicibacter sanguinis (SP572) -0.1183824398194 0.288831447262732 0.548986642032923 0.723672861732222 -0.215638106204231 0.399118804277627 0.83407755182766 0.699110405289405 1 1 FALSE FALSE TRUE TRUE Porphyromonas pogonae (SP577) 0.0111321227948271 0.0513880824699833 0.240212602262488 0.385385707564045 0.0463427925511697 0.133341951871537 0.964049055162218 0.896856855770571 1 1 FALSE FALSE TRUE TRUE Dubosiella newyorkensis (SP583) -0.822183337581556 1.57913309316002 0.634367334625092 0.923424423329465 -1.29606821269803 1.71008374184685 0.227200129921938 0.121417047146566 1 1 FALSE FALSE TRUE TRUE Akkermansia muciniphila (SP657) -0.603610425485579 1.17841608765073 0.475232073668293 0.714232957667893 -1.27013823125687 1.64990438343602 0.235888150405078 0.133360768377036 1 1 FALSE FALSE TRUE TRUE Romboutsia timonensis (SP687) -0.0202650042249792 0.0507209116535065 0.185301523062422 0.423633894043165 -0.109362318722834 0.119728171817004 0.915608603891479 0.907650614500487 1 1 FALSE FALSE TRUE TRUE Idiomarina loihiensis (SP694) 0.190970742325691 -0.286182596006693 0.337740775794468 0.492271322469222 0.565435849066403 -0.581351346186911 0.587280627931798 0.577012078291413 1 1 FALSE FALSE TRUE TRUE Eubacteriales_[G-2] bacterium_MOT-162 (SP706) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Corynebacterium falsenii (SP75) -0.0825366861523973 0.223114232206562 0.372677574285988 0.474932915065554 -0.221469419807535 0.469780520846331 0.829670254375981 0.649685928250268 1 1 FALSE FALSE TRUE TRUE Lawsonibacter asaccharolyticus (SP77) -0.59903050822872 1.02311539924209 0.385108204529566 0.618722798849149 -1.55548622746294 1.65359253149411 0.180552890119813 0.159117178551921 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-3] bacterium_MOT-168 (SP818) -0.313393996434972 0.642493141164804 0.220844803478296 0.386518716040872 -1.41906891853026 1.66225622331019 0.215097790691736 0.15734996095717 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-11] bacterium_MOT-177 (SP877) -0.584013411146421 0.38140493548753 0.342095323330758 0.586811947185018 -1.7071657263837 0.649961094550238 0.229913026206135 0.582400469205184 1 1 FALSE FALSE TRUE TRUE Clostridioides difficile (SP975) 0.330642741423902 -1.49831362674978 1.05991073594449 1.13768420915832 0.311953384573717 -1.31698551732406 0.807494579921654 0.413441760808114 1 1 FALSE FALSE TRUE TRUE Rhodanobacter spathiphylli_umsongensis_xiangquanii (SPP102) 0.0086160448267116 -0.0841626832198291 0.329405733198344 0.450462484512618 0.0261563292874555 -0.186836165304397 0.979773340763338 0.856440285551627 1 1 FALSE FALSE TRUE TRUE Pseudomonas alcaliphila_chengduensis_composti_indoloxydans_men ...(8 species) (SPP106) 0.16200939774941 -0.225220254946752 0.294860801493111 0.426936674925785 0.549443659275934 -0.527526137186275 0.5960688872607 0.610584264326522 1 1 FALSE FALSE TRUE TRUE Mammaliicoccus fleurettii_lentus (SPP111) -2.01606014192933 4.74855029452253 0.200680337468566 0.36702616583044 -10.0461269268352 12.9379067123958 0.0631616110065619 0.0491081416395078 1 1 FALSE FALSE TRUE FALSE Clostridium disporicum_saudiense (SPP117) -0.0807573581134318 0.151541501467594 0.254931507623855 0.439451762101265 -0.316780608509904 0.34484217503871 0.759518686132734 0.739103728443624 1 1 FALSE FALSE TRUE TRUE Enterococcus caccae_crotali_haemoperoxidus_moraviensis_phoenicu ...(14 species) (SPP124) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Catenococcus_Vibrio alginolyticus_azureus_diabolicus_galatheae_harveyi ...(12 species) (SPP131) 0.250082599955243 -0.386687792324113 0.335007852249023 0.485359982032478 0.746497726176723 -0.796703079443903 0.47441446992285 0.446130313411605 1 1 FALSE FALSE TRUE TRUE Staphylococcus argenteus_aureus_capitis_caprae_croceilyticus_epid ...(17 species) (SPP141) -1.05490024889894 1.65698927809417 4.85336017654139e-06 0.297739916307762 -217354.618352411 5.56522383240483 1 1 1 1 FALSE FALSE TRUE TRUE Carnobacterium_Enterococcus_Vagococcus bulliens_diestrammenae_divergens_fessus_italicus_s ...(6 species) (SPP168) -0.205961261208967 -0.697062285302005 0.330676345762891 0.452626134011926 -0.622848485681072 -1.54003985391537 0.567135269282749 0.198393017418011 1 1 FALSE FALSE FALSE FALSE Malaciobacter canalis_marinus (SPP219) -0.086480881925143 0.230345257789928 0.36210994077954 0.465626722918884 -0.238824931839676 0.494699394282952 0.816590779319385 0.632663416321001 1 1 FALSE FALSE TRUE TRUE Lactobacillus gasseri_hominis_johnsonii_taiwanensis (SPP222) 0.50278411902078 -0.84997391061093 0.843171288192547 1.0326280640586 0.596301280726205 -0.823117190201304 0.5656681782257 0.431710126756398 1 1 FALSE FALSE TRUE TRUE Lacticaseibacillus casei_rhamnosus (SPP226) 0.261089281878232 -0.609953881982644 0.995294211481626 1.22099342324743 0.262323721836548 -0.499555419684712 0.801846036406967 0.635175038873004 1 1 FALSE FALSE TRUE TRUE Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP228) 0.484603540425536 -0.22776668986842 0.249052617672395 0.396595848423161 1.94578778153212 -0.574304271650865 0.19108502337007 0.623746664158907 1 1 FALSE FALSE TRUE TRUE Staphylococcus casei_cohnii_cohnii_subsp._cohnii_edaphicus_gallin ...(9 species) (SPP229) -1.57764946638771 2.96415432930464 0.437400903756441 0.790957507796818 -3.60687290044147 3.74755192293602 0.00568698459500512 0.00457190826515207 0.443584798410399 0.365752661212165 FALSE FALSE TRUE TRUE Streptococcus alactolyticus_macedonicus_pasteurianus (SPP235) 0.853752200040604 -1.49341539248061 0.466248336298257 0.615635592354659 1.83111044817641 -2.42581067603426 0.100318553109534 0.0382444314203239 1 1 FALSE FALSE TRUE TRUE Vibrio cincinnatiensis_injensis_metschnikovii (SPP237) 0.425861690090206 -0.708949457571544 0.493564421767017 0.766022514646254 0.862828987076444 -0.925494282500213 0.41063364289862 0.378856578740585 1 1 FALSE FALSE TRUE TRUE Salinivibrio costicola_kushneri_proteolyticus_sharmensis (SPP239) -0.0243665517437197 0.116468985790653 0.362471244443371 0.476333102995506 -0.0672234063177568 0.244511634942474 0.947873562362219 0.812317955610881 1 1 FALSE FALSE TRUE TRUE Halomonas alkaliantarctica_boliviensis_glaciei_neptunia_prof ...(10 species) (SPP241) 0.161575279653135 -0.224424371770249 0.15600921191125 0.320340347505095 1.03567781462194 -0.700581033635418 0.327377538186678 0.501273187075894 1 1 FALSE FALSE TRUE TRUE Ligilactobacillus animalis_apodemi_faecis_murinus (SPP259) 0.323740061407997 -0.521726471654161 0.669430507083165 0.782761191130184 0.483605180795529 -0.666520616461414 0.640214684839262 0.521796002078409 1 1 FALSE FALSE TRUE TRUE Aliarcobacter cryaerophilus_lanthieri (SPP264) -0.238223185994266 0.0237641598315474 0.335769135046202 0.481558140766287 -0.709485063186307 0.0493484749187965 0.504646975742907 0.96224332017553 1 1 FALSE FALSE TRUE TRUE Paracoccus aestuarii_beibuensis_hibisci_marinus_pacificus_pue ...(8 species) (SPP268) 0.055001461509862 -0.0290390385075798 0.304908132502811 0.427469266264675 0.180386994136193 -0.0679324592416424 0.860845214404554 0.94732468177949 1 1 FALSE FALSE TRUE TRUE Enterococcus casseliflavus_gallinarum_saccharolyticus (SPP279) 0.329522402620714 -0.64741525556438 0.433779887952052 0.573129173323787 0.759653482729329 -1.12961490305891 0.469253061504661 0.291368318836236 1 1 FALSE FALSE TRUE TRUE Pseudoalteromonas aestuariivivens_arabiensis_atlantica_carrageenovor ...(19 species) (SPP281) 0.186560475147704 -0.148727022877893 0.0968617289275851 0.291264738968147 1.92604940272312 -0.510624881696229 0.102403593195621 0.627850906850634 1 1 FALSE FALSE TRUE TRUE Pseudoalteromonas agarivorans_antarctica_arctica_distincta_elyakovii ...(11 species) (SPP282) -0.732589577999147 1.67261682032337 0.495907431201952 0.5993923160641 -1.47727082093434 2.79052095847103 0.236111073116299 0.0683892246648141 1 1 FALSE FALSE TRUE TRUE Enterococcus canintestini_canis_dispar_durans_faecalis_faecium_ ...(15 species) (SPP288) -2.03389973651322 3.80061315786808 0.214326564233859 0.357126828616339 -9.48972304848766 10.6421944623798 5.52382044661938e-06 2.12648473036342e-06 0.000436381815282931 0.000172245263159437 TRUE TRUE TRUE TRUE Adlercreutzia caecimuris_mucosicola (SPP30) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Limosilactobacillus antri_caviae_frumenti_oris_panis_reuteri_reuteri_c ...(8 species) (SPP304) 0.0948235707820033 -1.88528435963667 0.709070574376202 0.799064225402408 0.133729383517887 -2.35936524212086 0.905859003129066 0.142281723184333 1 1 FALSE FALSE TRUE TRUE Aeromonas [Haemophilus] piscium_allosaccharophila_aquatica_a ...(25 species) (SPP313) -0.0248534675599848 0.117361664787139 0.239410212871908 0.410015837203118 -0.10381122535187 0.286236906329544 0.919595678355004 0.781176192990713 1 1 FALSE FALSE TRUE TRUE Streptococcus acidominimus_cuniculi_sp._MOT-012 (SPP316) 0.228338279327144 -0.457527477828238 0.558054887352351 0.720726974361862 0.40916813829994 -0.634813867253042 0.699353746718292 0.553458120947919 1 1 FALSE FALSE TRUE TRUE Bifidobacterium choerinum_pseudolongum (SPP320) -0.532328958814803 1.0477333987543 0.422784249774675 0.948430987984172 -1.25910309832618 1.10470177801887 0.23966834150977 0.297945688595744 1 1 FALSE FALSE TRUE TRUE Sporosarcina sp._MOT-204_sp._MOT-205 (SPP321) -0.145898880108583 0.859578317199904 0.222361761984762 0.381486640747983 -0.656132955622925 2.25323307656206 0.630331107829352 0.265910780829252 1 1 FALSE FALSE TRUE TRUE Corynebacterium freneyi_xerosis (SPP336) -0.42005181074801 0.942088591014865 0.268374162713019 0.414457248509044 -1.56517231950225 2.27306578520198 0.361942285545482 0.2638483221452 1 1 FALSE FALSE TRUE TRUE Aliarcobacter_Arcobacter butzleri_lacus (SPP338) -0.054430575671782 0.0342585263840849 4.85336017654139e-06 0.293671303912174 -11215.0291121749 0.116656023001588 7.95058681753915e-09 0.917790949001934 6.36046945403132e-07 1 TRUE FALSE FALSE TRUE Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP339) -0.267589989862672 0.718532981654783 0.345075220976028 0.469419397592411 -0.775454085360885 1.53068446966623 0.481364150679464 0.200596384110059 1 1 FALSE FALSE TRUE TRUE Lactococcus allomyrinae_cremoris_lactis_taiwanensis (SPP35) 0.320158931838808 -0.913043120720402 0.303218167117887 0.448102175445042 1.05586988695943 -2.0375779693852 0.368539310076239 0.134359526010425 1 1 FALSE FALSE TRUE TRUE Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP351) 0.648782636929426 -1.11763786011011 0.843796261630128 1.16212392459366 0.768885412784413 -0.961720033860327 0.461660925569575 0.361315164565693 1 1 FALSE FALSE TRUE TRUE Lactobacillus acidophilus_crispatus_gallinarum (SPP358) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Corynebacterium lowii_mastitidis (SPP368) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Lactiplantibacillus fabifermentans_paraplantarum_pentosus_plantarum (SPP369) -0.304033493175133 0.258009031623588 0.863595961858807 1.0796168997199 -0.352055251069876 0.238982023799856 0.742561797772983 0.822864622545228 1 1 FALSE FALSE TRUE TRUE Bacillus glycinifermentans_haynesii_licheniformis_paraliche ...(7 species) (SPP5) -0.040250787056265 -0.163364827681357 0.211905059897902 0.36767074592845 -0.189947267307625 -0.444323703994521 0.858600331468162 0.679788836713792 1 1 FALSE FALSE TRUE TRUE Buttiauxella_Enterobacter_Erwinia_Klebsiella_Kluyv ...(10 species) adecarboxylata_aerogenes_agglomerans_agrestis_amni ...(30 species) (SPP54) 0.636299388136859 -0.888841895724185 0.5732163070671 0.714575012052484 1.11005109291557 -1.24387486370556 0.29922567693774 0.248756053886037 1 1 FALSE FALSE TRUE TRUE Pseudomonas antarctica_azotoformans_canadensis_costantinii_ext ...(14 species) (SPP65) 0.0348870072451698 0.00783746097768869 0.398082513207739 0.611165568452326 0.0876376280988864 0.0128237933912667 0.932083667495036 0.990048144069599 1 1 FALSE FALSE TRUE TRUE Halomonas alkaliphila_andesensis_aquamarina_axialensis_hydro ...(10 species) (SPP81) -0.506986174812817 0.0271284565352709 0.0964740908906832 0.305726289510035 -5.25515369082144 0.0887344578012824 0.0343549328363513 0.937378409611228 1 1 FALSE FALSE FALSE TRUE