Taxon	F20250829.S01	F20250829.S05	F20250829.S07	F20250829.S12	F20250829.S14	F20250829.S15	F20250829.S17	F20250829.S18	F20250829.S19	F20250829.S22	F20250829.S31	F20250829.S54	F20250829.S57	F20250829.S63
Roseburia faecis (SP1005)	30	31	24	0	0	0	0	67	0	0	0	0	0	16
Subdoligranulum variabile (SP1036)	45	55	13	0	0	0	0	0	0	0	0	5	11	21
Faecalibaculum rodentium (SP105)	14	8499	0	655	1190	173	900	363	8	55	23	633	245	466
Uruburuella testudinis (SP1148)	488	802	169	67	151	88	90	312	201	89	115	21	181	328
Streptococcus entericus (SP1171)	167	181	78	31	14	42	21	74	72	0	23	0	21	64
Lachnospiraceae_[G-14] bacterium_MOT-184 (SP119)	0	14	0	0	0	0	8	73	0	0	0	0	0	0
Eubacteriales_[G-4] bacterium_MOT-164 (SP120)	0	0	0	6	113	10	0	17	0	14	31	0	24	30
Carnobacteriaceae_[G-1] bacterium_MOT-198 (SP1382)	0	0	0	356	0	0	5306	0	0	0	0	0	0	0
Nitrincola lacisaponensis (SP1395)	52	58	17	11	20	11	9	37	41	6	21	0	44	40
Atopostipes sp._MOT-200 (SP1446)	15	301	14	10	9	0	0	30	0	0	0	0	16	8
Streptococcus pseudoporcinus (SP1532)	53	80	22	0	0	18	0	43	26	0	0	0	0	25
Austwickia chelonae (SP1660)	100	255	60	12	13	11	32	54	39	0	19	7	56	53
Mesonia hippocampi (SP1789)	89	130	29	14	22	26	42	50	32	15	8	8	49	30
Lachnoclostridium [Clostridium] scindens (SP18)	0	315	0	0	185	94	10	32	0	0	73	0	0	105
Cutibacterium acnes (SP216)	43	15	0	0	8634	988	0	21	0	16903	13403	31	4951	0
Epilithonimonas hominis (SP233)	77	106	26	31	27	28	31	84	50	0	12	0	35	40
Rodentibacter heylii (SP238)	96	7	0	75933	102	0	118854	40	0	160	0	68261	120	0
Eubacteriales_[G-4] bacterium_MOT-165 (SP285)	0	237	0	0	66	11	10	0	0	0	0	0	0	29
Mollicutes_[G-1] bacterium_MOT-186 (SP366)	0	1073	0	0	31	96	3	0	0	0	7	0	0	4
Oceanotoga teriensis (SP367)	94	111	28	16	15	5	17	46	15	7	8	5	22	32
Prevotella copri (SP385)	0	0	0	0	0	10	0	3	0	0	0	0	0	0
Streptococcus danieliae (SP391)	0	0	0	761	0	0	1075	0	0	0	0	839	0	0
Erysipelatoclostridium [Clostridium] saccharogumia (SP417)	15	121	0	0	17	120	0	0	0	0	0	0	0	0
Mammaliicoccus sciuri (SP42)	0	0	0	0	0	0	0	0	0	2699	4747	0	1503	3445
Lachnoclostridium pacaense (SP425)	11	0	0	0	0	0	0	0	14	0	0	0	0	0
Acutalibacter muris (SP479)	0	100	0	7	393	1138	14	67	0	3	268	0	6	295
Pasteurella testudinis (SP496)	152	320	72	23	42	31	23	137	73	48	35	13	76	131
Faecalibacterium prausnitzii (SP52)	51	119	7	0	0	0	0	0	0	0	0	9	16	39
Turicibacter sanguinis (SP572)	31	9532	0	45	74	177	302	568	0	21	99	87	37	35
Porphyromonas pogonae (SP577)	147	178	60	28	34	13	60	64	41	28	37	6	85	141
Dubosiella newyorkensis (SP583)	14	35566	23	124	883	680	411	2307	0	77	3794	288	54	292
Akkermansia muciniphila (SP657)	4	808	0	0	5007	3702	8	34	6	92	1073	6	34	2707
Romboutsia timonensis (SP687)	0	10	0	0	0	6	25	0	0	0	3	0	0	0
Idiomarina loihiensis (SP694)	25	23	11	0	4	0	0	24	22	0	0	0	15	21
Eubacteriales_[G-2] bacterium_MOT-162 (SP706)	0	2026	0	0	0	0	0	39	0	0	59	0	0	5
Corynebacterium falsenii (SP75)	1494	2102	634	352	475	376	685	1384	1017	202	323	68	743	1071
Acinetobacter albensis (SP765)	0	0	0	0	0	0	0	13	0	0	0	0	0	14
Lawsonibacter asaccharolyticus (SP77)	0	0	0	0	151	22	27	80	5	4	0	0	0	186
Lachnospiraceae_[G-3] bacterium_MOT-168 (SP818)	0	352	0	0	266	179	9	49	0	0	46	12	0	172
Ligilactobacillus salivarius (SP826)	64	0	0	0	0	39	0	0	0	0	0	0	0	0
Lachnospiraceae_[G-11] bacterium_MOT-177 (SP877)	0	22	0	0	0	0	89	22	5	0	0	0	0	0
Clostridioides difficile (SP975)	7	0	0	0	0	14	0	0	0	0	0	0	0	0
Rhodanobacter spathiphylli_umsongensis_xiangquanii (SPP102)	22	16	0	14	6	0	14	0	11	0	11	0	0	22
Pseudomonas alcaliphila_chengduensis_composti_indoloxydans_men ...(8 species) (SPP106)	75	211	28	0	12	9	27	55	49	13	24	0	52	46
Mammaliicoccus fleurettii_lentus (SPP111)	64	852	93	18	4122	452	854	49	0	377	1080	0	4886	9979
Clostridium disporicum_saudiense (SPP117)	0	5614	0	0	5	27	14	455	6	0	0	0	0	0
Catenococcus_Vibrio alginolyticus_azureus_diabolicus_galatheae_harveyi ...(12 species) (SPP131)	52	118	25	0	0	28	22	53	0	0	24	0	30	53
Staphylococcus argenteus_aureus_capitis_caprae_croceilyticus_epid ...(17 species) (SPP141)	0	51	0	0	206	31	0	0	0	695	0	0	1194	0
Carnobacterium_Enterococcus_Vagococcus bulliens_diestrammenae_divergens_fessus_italicus_s ...(6 species) (SPP168)	165	362	98	0	0	45	0	130	124	0	0	0	0	0
Malaciobacter canalis_marinus (SPP219)	445	550	128	85	125	122	150	280	269	81	142	18	216	295
Lactobacillus gasseri_hominis_johnsonii_taiwanensis (SPP222)	330	6904	877	13	5996	2024	36	325	38	7770	21910	28	406	1491
Lacticaseibacillus casei_rhamnosus (SPP226)	4137	7146	2210	0	0	0	0	12	0	0	0	141	663	1622
Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP228)	0	0	0	33707	0	44	55012	0	46	0	0	31417	0	0
Staphylococcus casei_cohnii_cohnii_subsp._cohnii_edaphicus_gallin ...(9 species) (SPP229)	54	731	40	123	484	110	0	24	0	475	1463	0	739	521
Streptococcus alactolyticus_macedonicus_pasteurianus (SPP235)	166	245	98	10	7	26	19	67	53	0	13	0	20	48
Vibrio cincinnatiensis_injensis_metschnikovii (SPP237)	13392	22037	6987	89	173	164	125	388	312	88	126	331	4414	6829
Salinivibrio costicola_kushneri_proteolyticus_sharmensis (SPP239)	9409	13310	4016	1293	2806	2605	2042	7630	5680	1579	2519	290	4391	5223
Halomonas alkaliantarctica_boliviensis_glaciei_neptunia_prof ...(10 species) (SPP241)	1833	3413	1010	170	282	223	286	582	481	203	290	107	874	1454
Ligilactobacillus animalis_apodemi_faecis_murinus (SPP259)	125	93	58	3401	53	137	2197	117	139	51	0	386	98	65
Aliarcobacter cryaerophilus_lanthieri (SPP264)	38	49	36	16	23	16	13	45	27	0	9	0	22	51
Paracoccus aestuarii_beibuensis_hibisci_marinus_pacificus_pue ...(8 species) (SPP268)	303	351	87	69	73	62	78	127	125	57	57	12	125	187
Enterococcus casseliflavus_gallinarum_saccharolyticus (SPP279)	2495	3728	857	651	2458	846	1375	2258	1712	2377	909	253	5073	2652
Pseudoalteromonas aestuariivivens_arabiensis_atlantica_carrageenovor ...(19 species) (SPP281)	88	62	0	6	0	13	14	33	0	0	0	0	0	0
Pseudoalteromonas agarivorans_antarctica_arctica_distincta_elyakovii ...(11 species) (SPP282)	794	1405	399	0	26	0	0	28	16	0	19	22	414	487
Enterococcus canintestini_canis_dispar_durans_faecalis_faecium_ ...(15 species) (SPP288)	4074	6397	5812	6953	60126	10071	19403	3390	2233	49386	62898	4791	116002	64536
Limosilactobacillus antri_caviae_frumenti_oris_panis_reuteri_reuteri_c ...(8 species) (SPP304)	0	28	0	0	0	8	0	0	0	0	0	7	0	0
Levilactobacillus_Limosilactobacillus_Secundilactobacillus acidifarinae_antri_caviae_collinoides_frumenti_ori ...(12 species) (SPP305)	21	0	4	0	0	0	0	0	0	0	0	0	0	0
Muribacter muris_sp._MOT-142_sp._MOT-143 (SPP311)	0	0	0	103	16	10	575	0	0	0	0	280	0	26
Aeromonas [Haemophilus] piscium_allosaccharophila_aquatica_a ...(25 species) (SPP313)	59	117	39	0	15	8	0	23	5	10	13	12	14	49
Streptococcus acidominimus_cuniculi_sp._MOT-012 (SPP316)	101	0	42	54452	62432	6844	96280	57	82	41310	40	34151	114333	75993
Bifidobacterium choerinum_pseudolongum (SPP320)	84	10167	59	366	26932	2447	170	237	103	44834	49687	568	60830	34252
Sporosarcina sp._MOT-204_sp._MOT-205 (SPP321)	55	307	62	0	13	0	0	44	0	15	0	0	91	15
Corynebacterium freneyi_xerosis (SPP336)	80	128	42	0	0	0	0	0	0	0	0	0	24	82
Aliarcobacter_Arcobacter butzleri_lacus (SPP338)	49	98	0	0	0	0	15	17	0	0	0	0	0	39
Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP339)	76	0	10	0	32	0	49	42	0	19	25	0	47	11
Lactococcus allomyrinae_cremoris_lactis_taiwanensis (SPP35)	110	196	49	0	0	11	0	0	0	0	0	0	38	49
Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP351)	6531	16233	4260	0	27	58	27	46	24	18	26	227	3186	4395
Corynebacterium lowii_mastitidis (SPP368)	0	0	0	0	162	8	26	0	0	10	2397	4372	31	172
Lactiplantibacillus fabifermentans_paraplantarum_pentosus_plantarum (SPP369)	3608	4860	1884	0	0	6	7	0	37	0	0	59	672	1298
Bacillus glycinifermentans_haynesii_licheniformis_paraliche ...(7 species) (SPP5)	68	55	31	0	0	0	0	44	26	0	0	0	17	17
Buttiauxella_Enterobacter_Erwinia_Klebsiella_Kluyv ...(10 species) adecarboxylata_aerogenes_agglomerans_agrestis_amni ...(30 species) (SPP54)	206	195	147	21	53	183	17	102	124	0	29	0	43	70
Pseudomonas antarctica_azotoformans_canadensis_costantinii_ext ...(14 species) (SPP65)	43	270	32	10	44	32	12	51	25	0	0	6	0	43
Halomonas alkaliphila_andesensis_aquamarina_axialensis_hydro ...(10 species) (SPP81)	84	108	0	0	0	0	0	68	49	0	0	0	0	0