taxon lfc_(Intercept) lfc_GroupM3wk se_(Intercept) se_GroupM3wk W_(Intercept) W_GroupM3wk p_(Intercept) p_GroupM3wk q_(Intercept) q_GroupM3wk diff_(Intercept) diff_GroupM3wk passed_ss_(Intercept) passed_ss_GroupM3wk Roseburia faecis (SP1005) -0.0385100120586039 -0.0781805370982473 0.400515215251685 0.450566212319485 -0.0961511837556636 -0.173516200195703 0.932167444031489 0.878218737802122 1 1 FALSE FALSE FALSE TRUE Subdoligranulum variabile (SP1036) -0.389968688873025 1.51528574916699 0.0542135570915931 0.235249444532189 -7.19319501972869 6.44118736254725 1 1 1 1 FALSE FALSE TRUE TRUE Faecalibaculum rodentium (SP105) -1.53035035876207 3.55995318459771 0.273839484744107 0.559784638549172 -5.58849415084215 6.3595049585931 0.00011828481656257 3.6129462303344e-05 0.00851650679250504 0.00269847785020112 TRUE TRUE TRUE TRUE Uruburuella testudinis (SP1148) 0.823119767670802 -0.101000345408984 0.264170909370181 0.354001927482465 3.11586074951716 -0.285310156719377 0.00892316293938223 0.780271211467276 0.455081309908494 1 FALSE FALSE TRUE TRUE Streptococcus entericus (SP1171) 0.996526212613936 -0.829062522749245 0.232869717752776 0.32098097620447 4.27932932727598 -2.58290236559415 0.00205197735664405 0.0295555727245392 0.125170618755287 1 FALSE FALSE FALSE FALSE Lachnospiraceae_[G-14] bacterium_MOT-184 (SP119) -0.181238135581263 0.440742733298584 0.3317735841296 0.390864817153505 -0.546270541871911 1.12760912201901 0.639675420914893 0.376573924157111 1 1 FALSE FALSE TRUE TRUE Eubacteriales_[G-4] bacterium_MOT-164 (SP120) -0.157370055598862 1.32984248086695 0.534287254918873 0.62022029498205 -0.294542035487552 2.14414538128818 0.780180629904024 0.0848710821779846 1 1 FALSE FALSE TRUE TRUE Nitrincola lacisaponensis (SP1395) 0.720642271303434 -0.040782452344867 0.22754453277301 0.355364748823514 3.16703839253444 -0.114762233676478 0.00896579498800546 0.910701618059898 0.455081309908494 1 FALSE FALSE FALSE TRUE Atopostipes sp._MOT-200 (SP1446) -0.397967174131523 1.72282332124936 0.418795090627279 0.522876810010881 -0.95026704715053 3.29489334440652 0.385614264264701 0.0215966776634943 1 1 FALSE FALSE TRUE FALSE Streptococcus pseudoporcinus (SP1532) 0.186330692230156 -0.5316034340806 0.263846047003175 0.332322760414032 0.706209906673015 -1.59966002153536 0.519019780321441 0.184923189811984 1 1 FALSE FALSE FALSE FALSE Austwickia chelonae (SP1660) 0.78475150076026 -0.169626988376081 0.222403760038511 0.354468480450971 3.52849925120139 -0.478538989306675 0.00472729102837603 0.641636739318073 0.27418287964581 1 FALSE FALSE FALSE TRUE Mesonia hippocampi (SP1789) 0.696259887340568 0.0963372462158256 0.237250217000238 0.320405775142764 2.93470706220627 0.300672627304861 0.0124942385823898 0.768809820730131 0.612217690537101 1 FALSE FALSE TRUE TRUE Lachnoclostridium [Clostridium] scindens (SP18) 0.466659074198925 0.300453813372859 0.0542135570915931 0.281201169708189 8.60779294394039 1.06846573108017 0.0132291283602866 0.397185293615096 0.634998161293757 1 FALSE FALSE FALSE TRUE Cutibacterium acnes (SP216) -2.63559053395237 5.15184028621143 0.297549400276014 0.959436459340139 -8.85765701933034 5.36965239965412 4.77471845731184e-06 0.000314682561772331 0.0003628786027557 0.0220277793240631 TRUE TRUE FALSE TRUE Epilithonimonas hominis (SP233) 0.501306003629116 0.145387306870546 0.193914383542185 0.290587955475789 2.58519246727285 0.500321173437826 0.0294447543274939 0.628853976375422 1 1 FALSE FALSE FALSE TRUE Rodentibacter heylii (SP238) 0.0504574461749003 1.17173143408888 0.599745712983594 0.687222606258583 0.0841313994957736 1.70502457779742 0.935019167723355 0.126586263877154 1 1 FALSE FALSE TRUE TRUE Eubacteriales_[G-4] bacterium_MOT-165 (SP285) -0.394275038337937 1.53586047424384 0.054213557091593 0.302438908084772 -7.27262809322426 5.07825029514175 0.00536536378836526 0.0147501494418818 0.295095008360089 0.899759115954789 FALSE FALSE FALSE FALSE Mollicutes_[G-1] bacterium_MOT-186 (SP366) -0.74666585955104 2.1295279864163 0.31999445399673 0.446128937747139 -2.33337125136135 4.77334646160812 0.0418093118239843 0.000753240249710234 1 0.0519735772300061 FALSE FALSE FALSE FALSE Oceanotoga teriensis (SP367) 0.644618874338993 0.176667710884942 0.314997727965604 0.381878762100236 2.04642388534746 0.462627745814705 0.0632698054608597 0.651907693624167 1 1 FALSE FALSE FALSE TRUE Streptococcus danieliae (SP391) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Erysipelatoclostridium [Clostridium] saccharogumia (SP417) -0.0903290372548624 1.03883066471434 0.372356006669589 0.449912312238174 -0.242587834322265 2.30896251659903 0.816404442911699 0.0603545610016727 1 1 FALSE FALSE TRUE TRUE Acutalibacter muris (SP479) -0.172011085872495 1.10374840364227 0.221679338962134 0.377803569822477 -0.775945501632325 2.92148749192842 0.472868444377503 0.0329567603129738 1 1 FALSE FALSE TRUE FALSE Pasteurella testudinis (SP496) 0.983223362822362 -0.350050382311409 0.201108993804214 0.353342715476544 4.8890074194273 -0.990682323362195 0.000372801436465711 0.341396923776867 0.0253504976796683 1 TRUE FALSE TRUE TRUE Faecalibacterium prausnitzii (SP52) 0.424614650381234 -0.120269337651025 0.158558425342066 0.28745801009505 2.67796964724638 -0.41838923747944 0.115729864757113 0.716308759473916 1 1 FALSE FALSE TRUE TRUE Turicibacter sanguinis (SP572) -0.449358212768462 1.87840984638543 0.537626388488801 0.834375574351593 -0.835818744000923 2.25127616882262 0.419588423102322 0.0438960929739779 1 1 FALSE FALSE TRUE FALSE Porphyromonas pogonae (SP577) 0.595751437333655 0.252683724004356 0.144715202918294 0.297449046090383 4.1167163181191 0.849502552876148 0.00142901310630751 0.412229334861591 0.0885988125910658 1 FALSE FALSE TRUE TRUE Dubosiella newyorkensis (SP583) 0.0333374762042864 1.12754988576115 0.623909806874202 0.679850508747794 0.0534331658790678 1.65852620723631 0.958266026673603 0.123100515484902 1 1 FALSE FALSE TRUE TRUE Akkermansia muciniphila (SP657) -1.07857701872766 2.85719465565528 0.473655907960779 0.660109085488852 -2.27713198674378 4.32836741451506 0.0418948249644178 0.000981527513356349 1 0.0667438709082317 FALSE FALSE FALSE TRUE Romboutsia timonensis (SP687) -0.855402954014328 2.13223562106857 0.0542135570915931 0.381991802061914 -15.7783956616079 5.58188843205326 1.85985237643109e-05 0.00254426580376575 0.00139488928232332 0.16792154304854 TRUE FALSE FALSE TRUE Idiomarina loihiensis (SP694) 0.570284373584547 -0.493286647715125 0.161733208189967 0.263344292045288 3.52608088324514 -1.87316248202674 0.0243163036649718 0.13433886756364 1 1 FALSE FALSE FALSE TRUE Eubacteriales_[G-2] bacterium_MOT-162 (SP706) 0.201410464775538 0.916584905102246 0.0542135570915931 0.338193986179999 3.7151309668771 2.71023419267546 0.0205616951190189 0.0535243205280005 0.925276280355849 1 FALSE FALSE FALSE TRUE Corynebacterium falsenii (SP75) 0.967303961746749 -0.325286869527123 0.252584463927687 0.373407898007674 3.82962572877673 -0.87113012676673 0.00239719685210852 0.400775413290907 0.143831811126511 1 FALSE FALSE TRUE TRUE Acinetobacter albensis (SP765) 2.00391539802341 -3.74592078594943 0.0542135570915931 0.235249444532189 36.9633631425037 -15.9231865282338 1 1 1 1 FALSE FALSE TRUE TRUE Lawsonibacter asaccharolyticus (SP77) 0.157627766759485 0.811063928735027 0.394365555583047 0.548199624931301 0.399699630274355 1.47950471297142 0.70321793628349 0.189494902600559 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-3] bacterium_MOT-168 (SP818) -0.815335154944963 2.4390064416124 0.304166796334598 0.377521458360442 -2.68055279133116 6.46057697542516 0.0551968679539859 0.00295595812460505 1 0.189181319974723 FALSE FALSE TRUE FALSE Lachnospiraceae_[G-11] bacterium_MOT-177 (SP877) -0.428405519184372 1.31549203114414 0.516491552702671 0.5574092101865 -0.829453099363645 2.36001129350554 0.559176504347003 0.255151939618246 1 1 FALSE FALSE TRUE TRUE Rhodanobacter spathiphylli_umsongensis_xiangquanii (SPP102) 0.387565118519569 0.273984744421325 0.240779664022595 0.34200073942719 1.60962563052335 0.801123251605292 0.146145793433485 0.44619919056904 1 1 FALSE FALSE TRUE TRUE Pseudomonas alcaliphila_chengduensis_composti_indoloxydans_men ...(8 species) (SPP106) 0.715991214715504 -0.310400963745705 0.194780740941823 0.306256357196416 3.6758830018485 -1.01353312821726 0.00510799071625458 0.337276610145002 0.286047480110257 1 FALSE FALSE FALSE TRUE Mammaliicoccus fleurettii_lentus (SPP111) -1.76432688691596 3.92391667283708 0.527392069200165 0.604465182473421 -3.34538001223968 6.49155118708532 0.00582976714789297 2.97311692782101e-05 0.314807425986221 0.00225956886514397 FALSE TRUE TRUE TRUE Clostridium disporicum_saudiense (SPP117) -0.548530669289387 2.28481306171857 0.646252325908568 0.707413950665798 -0.848787149072471 3.2298105791781 0.418003100615103 0.0103257821509446 1 0.640198493358563 FALSE FALSE TRUE FALSE Enterococcus caccae_crotali_haemoperoxidus_moraviensis_phoenicu ...(14 species) (SPP124) -1.63851955305575 3.26785893218445 0.0542135570915931 0.235249444532189 -30.2234282522265 13.8910378244796 1 1 1 1 FALSE FALSE TRUE TRUE Catenococcus_Vibrio alginolyticus_azureus_diabolicus_galatheae_harveyi ...(12 species) (SPP131) 0.111510247957067 0.269779475831102 0.164528690364734 0.277101634580756 0.677755640732729 0.973575909212039 0.52318818154826 0.367866528502368 1 1 FALSE FALSE TRUE TRUE Staphylococcus argenteus_aureus_capitis_caprae_croceilyticus_epid ...(17 species) (SPP141) -3.29301254392307 6.24315427016764 0.152508649642919 0.377312990878808 -21.5923001851584 16.5463538788489 2.72126570418479e-05 7.81340173216317e-05 0.00201373662109675 0.00570378326447911 TRUE TRUE FALSE FALSE Carnobacterium_Enterococcus_Vagococcus bulliens_diestrammenae_divergens_fessus_italicus_s ...(6 species) (SPP168) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Mannheimia_Muribacter caviae_glucosida_sp._MOT-141 (SPP194) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Malaciobacter canalis_marinus (SPP219) 0.78273593295082 -0.0381810469556778 0.227216467482987 0.337268665532605 3.4448908638606 -0.113206623850998 0.00485049438375596 0.911738602703683 0.27647817987409 1 FALSE FALSE TRUE TRUE Lactobacillus gasseri_hominis_johnsonii_taiwanensis (SPP222) -1.94344474027233 4.20254444472477 0.417834675494877 0.660538312163459 -4.65122895310338 6.36230233331991 0.000559263782536217 3.59797046693482e-05 0.0374706734299265 0.00269847785020112 TRUE TRUE TRUE TRUE Lacticaseibacillus casei_rhamnosus (SPP226) 0.0739811574934839 0.582527885711044 0.826723764369781 0.852302542852491 0.089487154817523 0.683475475459027 0.932996369135325 0.531843612258698 1 1 FALSE FALSE TRUE TRUE Staphylococcus casei_cohnii_cohnii_subsp._cohnii_edaphicus_gallin ...(9 species) (SPP229) -0.433370185994476 2.11442993547907 0.339669912665911 0.608088955237791 -1.27585685347624 3.47717207699033 0.233948713101123 0.00696953998679147 1 0.439081019167863 FALSE FALSE TRUE FALSE Streptococcus alactolyticus_macedonicus_pasteurianus (SPP235) 0.509530036218633 -0.0848292760441938 0.234918379675357 0.320471672370487 2.16896624658647 -0.264701324197308 0.0667187885817079 0.798864374417485 1 1 FALSE FALSE FALSE FALSE Vibrio cincinnatiensis_injensis_metschnikovii (SPP237) 1.06795164453129 -0.481849931636413 0.662762769815975 0.851392051179984 1.61136336132433 -0.565955403234731 0.133074323665028 0.581853239851261 1 1 FALSE FALSE TRUE TRUE Salinivibrio costicola_kushneri_proteolyticus_sharmensis (SPP239) 1.0002295600879 -0.376504466946686 0.187338821431166 0.300171614934282 5.33914728643368 -1.25429736928695 0.0001766998391808 0.233616212228299 0.0125456885818368 1 TRUE FALSE TRUE TRUE Halomonas alkaliantarctica_boliviensis_glaciei_neptunia_prof ...(10 species) (SPP241) 0.818821569608046 -0.0943142595335853 0.184697847452734 0.310762548671325 4.43330326206207 -0.303493004343119 0.000816357047074398 0.766711731119545 0.0530632080598359 1 FALSE FALSE TRUE TRUE Ligilactobacillus animalis_apodemi_faecis_murinus (SPP259) -2.24632015421757 4.48049881900983 0.154825190987603 1.10967071988655 -14.5087510623348 4.03768319620789 4.8127392348638e-08 0.00237003622296736 3.70580921084512e-06 0.158792426938813 TRUE FALSE FALSE FALSE Aliarcobacter cryaerophilus_lanthieri (SPP264) 0.348810875851037 0.523611688953011 0.163933790897053 0.270827403688915 2.12775458886376 1.93337779641552 0.0622482519031657 0.0852097257758608 1 1 FALSE FALSE TRUE TRUE Paracoccus aestuarii_beibuensis_hibisci_marinus_pacificus_pue ...(8 species) (SPP268) 0.959375900947252 -0.312954330505684 0.217727514262175 0.351001264679838 4.40631448991802 -0.891604566699046 0.000855864716676163 0.390132840909938 0.0547753418672744 1 FALSE FALSE TRUE TRUE Enterococcus casseliflavus_gallinarum_saccharolyticus (SPP279) 1.14587883502221 -0.756458906551752 0.239850250384759 0.429258352865119 4.77747608428189 -1.7622462125727 0.000573738029519478 0.105754414041487 0.0378667099482856 1 TRUE FALSE FALSE TRUE Pseudoalteromonas aestuariivivens_arabiensis_atlantica_carrageenovor ...(19 species) (SPP281) 0.592892432566214 0.192841798421725 0.173249558868074 0.307048612461557 3.42218725657876 0.62804973087403 0.0187936606228357 0.557537713442117 0.864508388650441 1 FALSE FALSE FALSE TRUE Pseudoalteromonas agarivorans_antarctica_arctica_distincta_elyakovii ...(11 species) (SPP282) 0.0555709947392783 0.91223131216885 0.669265418190415 0.743827712809879 0.0830328196091967 1.22640135135973 0.93614998450734 0.259696615567279 1 1 FALSE FALSE TRUE TRUE Enterococcus canintestini_canis_dispar_durans_faecalis_faecium_ ...(15 species) (SPP288) -1.24235789657666 3.11196491008706 0.246221333417013 0.419932194977087 -5.04569559158602 7.41063663922425 0.000286568247441126 8.1565893192891e-06 0.0197732090734377 0.000628057377585261 TRUE TRUE TRUE TRUE Adlercreutzia caecimuris_mucosicola (SPP30) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Muribacter muris_sp._MOT-142_sp._MOT-143 (SPP311) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Aeromonas [Haemophilus] piscium_allosaccharophila_aquatica_a ...(25 species) (SPP313) 0.451219677847843 -0.0639714355627998 0.203583515688064 0.289244933502323 2.21638611713148 -0.221167004684236 0.0622081494367464 0.831275377530874 1 1 FALSE FALSE TRUE TRUE Streptococcus acidominimus_cuniculi_sp._MOT-012 (SPP316) -2.90179671146324 5.37571399848062 0.551045902985779 0.90766574182189 -5.26598001317166 5.92257011671538 0.000265958454898936 9.98011121210161e-05 0.0186170918429255 0.00718568007271316 TRUE TRUE TRUE TRUE Bifidobacterium choerinum_pseudolongum (SPP320) -2.15057952188366 4.52475410500907 0.508093156495472 0.83616366197292 -4.23264807720909 5.41132592910454 0.00116251893188059 0.000157176813479182 0.0732386927084775 0.0111595537570219 FALSE TRUE TRUE TRUE Sporosarcina sp._MOT-204_sp._MOT-205 (SPP321) 0.423726563766227 -0.194462067178722 0.392228364767005 0.451065121724733 1.08030576528532 -0.431117499032422 0.329337142535891 0.684337039682687 1 1 FALSE FALSE FALSE TRUE Corynebacterium freneyi_xerosis (SPP336) 0.569549669283651 -0.0721737895188094 0.0593258713345963 0.241732094546102 9.60035910928988 -0.298569330044194 0.00239828002952129 0.784754888507082 0.143831811126511 1 FALSE FALSE FALSE TRUE Aliarcobacter_Arcobacter butzleri_lacus (SPP338) 0.0020442167779553 0.0472506041229037 0.139919346970839 0.248176721545301 0.0146099651135546 0.190390959428799 0.989043013405165 0.858274966444633 1 1 FALSE FALSE FALSE FALSE Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP339) -2.30540669008988 5.17744830811731 0.369866817289494 1.32330000097451 -6.23307250697606 3.91252800143921 9.71694563286618e-05 0.00290134433706252 0.00709337031199231 0.188587381909064 TRUE FALSE FALSE FALSE Lactococcus allomyrinae_cremoris_lactis_taiwanensis (SPP35) 0.258606363304676 0.05606391883074 0.477810448866158 0.522342835519573 0.541232122316178 0.107331650820813 0.617082185301363 0.919693877813494 1 1 FALSE FALSE TRUE TRUE Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP351) 0.352053713867637 0.480205249072762 1.00505909137163 1.17869488783134 0.350281607210957 0.407404201061976 0.733393304334225 0.692295558598093 1 1 FALSE FALSE TRUE TRUE Corynebacterium lowii_mastitidis (SPP368) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Lactiplantibacillus fabifermentans_paraplantarum_pentosus_plantarum (SPP369) -0.241415807474559 0.989994737624797 0.899761795836821 0.922163195547423 -0.268310800249115 1.07355698254375 0.799178004225122 0.332077478846899 1 1 FALSE FALSE TRUE TRUE Bacillus glycinifermentans_haynesii_licheniformis_paraliche ...(7 species) (SPP5) 0.537147225011978 -0.317647148639802 0.16273246569772 0.263237093909099 3.30079939924061 -1.20669600139824 0.0163915349117858 0.272962119916461 0.770402140853931 1 FALSE FALSE TRUE FALSE Buttiauxella_Enterobacter_Erwinia_Klebsiella_Kluyv ...(10 species) adecarboxylata_aerogenes_agglomerans_agrestis_amni ...(30 species) (SPP54) 0.648163794551751 0.0523280342127458 0.193489525077157 0.334882345217251 3.34986503426108 0.15625796629798 0.00647913811709224 0.878660537888141 0.343394320205889 1 FALSE FALSE FALSE TRUE Pseudomonas antarctica_azotoformans_canadensis_costantinii_ext ...(14 species) (SPP65) 0.960620857867922 -0.641598162769943 0.281008317491185 0.345378582619338 3.41847837973001 -1.85766632633699 0.00764631853219295 0.0961701640337745 0.397608563674033 1 FALSE FALSE FALSE FALSE Halomonas alkaliphila_andesensis_aquamarina_axialensis_hydro ...(10 species) (SPP81) -0.368923058610654 0.855120791079809 0.117414586263654 0.24295555791161 -3.14205475103611 3.51965930901202 0.0881098765865625 0.0721016813277145 1 1 FALSE FALSE TRUE TRUE