taxon lfc_(Intercept) lfc_GroupFemale Healthy Baseline se_(Intercept) se_GroupFemale Healthy Baseline W_(Intercept) W_GroupFemale Healthy Baseline p_(Intercept) p_GroupFemale Healthy Baseline q_(Intercept) q_GroupFemale Healthy Baseline diff_(Intercept) diff_GroupFemale Healthy Baseline passed_ss_(Intercept) passed_ss_GroupFemale Healthy Baseline Lachnospiraceae_[G-3] -0.461337043600975 0.528558076545102 0.270167679793359 0.438555540134938 -1.70759523846018 1.20522494455884 0.111465671308235 0.249597505277172 1 1 FALSE FALSE TRUE TRUE Gemella 0.00694895688935379 -0.5208225301748 0.369927180848941 0.605581120048015 0.0187846615471908 -0.860037595183789 0.985168187147142 0.398278312832837 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-2] 0.185752857687328 -1.39837760586405 0.324909954985804 0.446193501483942 0.571705652095035 -3.13401607422194 0.585402932106877 0.0165167193632809 1 1 FALSE FALSE FALSE TRUE Actinomyces -0.198362622776597 -0.222447740459861 0.520328468620392 0.653382550221891 -0.381225773216943 -0.340455588206813 0.706019197144098 0.736148235011295 1 1 FALSE FALSE TRUE TRUE Prevotella 0.925005140151234 -2.16967706678404 0.370768755649165 0.714826837898046 2.4948303384725 -3.03524847103389 0.0195688456242428 0.00554697755455426 1 0.449305181918895 FALSE FALSE TRUE TRUE Dialister 0.341108977844111 -0.968724779186144 0.356188690059953 0.56309025710235 0.957663697257475 -1.72037211968678 0.350260572395457 0.101610874144106 1 1 FALSE FALSE TRUE FALSE Haemophilus -0.27017892076559 0.0636294717287391 0.611592983963803 0.824288638666844 -0.441762622936793 0.0771931927044993 0.663922406196185 0.939321441983232 1 1 FALSE FALSE TRUE TRUE Aggregatibacter -0.222216732502552 0.324430811295743 0.513638191686842 0.69671644034859 -0.432632806709268 0.46565689067624 0.671056425318761 0.64773681098699 1 1 FALSE FALSE TRUE TRUE Granulicatella 0.125092226570728 -0.727388898032726 0.452131790011852 0.656478652379829 0.276672044156526 -1.10801607241277 0.784400757800517 0.278836014254373 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-5] 0.2605853164686 -1.14241215688629 0.33092777404068 0.559445985371439 0.787438640422385 -2.04204192497297 0.445145263117773 0.0619792411027984 1 1 FALSE FALSE TRUE FALSE Slackia -0.115738249474093 0.370035919395978 0.355080397944125 0.507609953006437 -0.325949419185639 0.728976879204899 0.751913670574324 0.484552559563098 1 1 FALSE FALSE TRUE TRUE Streptococcus 0.0652639041735919 -0.672163580551359 0.277968485544131 0.515366118376401 0.2347888612115 -1.30424480109195 0.816144109918656 0.203159590258539 1 1 FALSE FALSE TRUE TRUE Veillonellaceae_[G-1] 0.0507065531275243 -0.327459330897188 0.470059785282425 0.604656420204836 0.107872561565883 -0.541562646082971 0.915359712534895 0.595146985949941 1 1 FALSE FALSE TRUE FALSE Peptococcus 0.0552653696039795 -0.706458915774645 0.260655723007997 0.454390884052367 0.212024385907245 -1.55473831137252 0.835376086375526 0.144008424205499 1 1 FALSE FALSE TRUE FALSE Bacteroidales_[G-2] -0.185780300783817 -0.0946212834466597 0.300051308314856 0.544876070978523 -0.619161775454983 -0.173656522072501 0.548418475811286 0.865289883304348 1 1 FALSE FALSE TRUE TRUE Eggerthia 0.437461208538908 -0.502603702172522 0.268003066156143 0.426495562276849 1.63229926736747 -1.17845001596117 0.201119248513145 0.323579078744696 1 1 FALSE FALSE TRUE TRUE Riemerella -0.760609111688946 0.725669429321906 0.22954164686078 0.44342088902857 -3.31359961075066 1.63652513284089 0.00439164871037573 0.121245149192309 0.386465086513064 1 FALSE FALSE FALSE TRUE Rothia -1.92962265182536 2.67225184245842 0.440025093074082 0.813198670512469 -4.3852559369847 3.28609962037247 0.000170227427005839 0.00290789618988608 0.015831150711543 0.252986968520089 TRUE FALSE TRUE TRUE Solobacterium 0.506084559604532 -1.58490822717622 0.388477722826788 0.571042809892081 1.3027376600181 -2.77546306462689 0.21110343767822 0.0135075082490685 1 1 FALSE FALSE FALSE TRUE Abiotrophia -0.436158029778515 0.409883929407388 0.401085883533596 0.583310643689008 -1.08744298337286 0.702685496728082 0.294006476643603 0.49301367989554 1 1 FALSE FALSE TRUE TRUE Treponema 0.037146204188852 -0.557821240850044 0.326487235612018 0.575578934339442 0.113775364354503 -0.969148117782007 0.910403196389343 0.342553096978369 1 1 FALSE FALSE TRUE FALSE Peptostreptococcus 0.657606749516978 -1.60976841870974 0.412723708537744 0.599133223626301 1.59333407777043 -2.68682883076736 0.135098905045807 0.0186565462750228 1 1 FALSE FALSE TRUE FALSE Erysipelotrichaceae_[G-1] 0.531611189227396 -0.678024363217005 0.285793373287911 0.438686202745518 1.86012426779345 -1.5455794118292 0.112204433969446 0.173162320630713 1 1 FALSE FALSE TRUE TRUE Oribacterium 0.327377141007805 -0.733927546201555 0.454675264343145 0.65716508009389 0.720024084619507 -1.11680849824933 0.480274780193475 0.27800078302048 1 1 FALSE FALSE TRUE FALSE Saccharibacteria_(TM7)_[G-6] -0.451775395324643 0.585110712544298 0.214205296136764 0.364582088584296 -2.10907668238136 1.60488057659753 0.0887257176990915 0.169426585281569 1 1 FALSE FALSE TRUE TRUE Megasphaera -0.234866620560576 0.653277619893317 0.291139238423802 0.453753404821331 -0.806715789435048 1.43971948849739 0.443150007394819 0.187905133377685 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-7] 0.0200723441480969 -0.243431979585074 0.275046528327783 0.43538019942198 0.0729779949237388 -0.559125058760733 0.943419779011478 0.58971634034624 1 1 FALSE FALSE TRUE TRUE Campylobacter 0.0126673880036862 -0.390572449703756 0.281195628417586 0.516137647569571 0.0450483105835297 -0.756721489980267 0.964441536118576 0.456581588062565 1 1 FALSE FALSE TRUE TRUE Mycoplasma -0.406999386810252 1.6386000949906 0.0980431329995335 0.287779708273093 -4.15122787653255 5.69393896749531 0.0142460896803498 0.00469986794701621 1 0.392051816554615 FALSE FALSE FALSE FALSE Anaeroglobus -0.524632507516275 2.22172621777569 0.233893145373723 0.391279460234276 -2.24304353459353 5.67810591551484 0.0749279144334907 0.00235942292175693 1 0.209988640036367 FALSE FALSE TRUE FALSE Schaalia 0.765892509164537 -1.69083298635164 0.270876208166911 0.472069473914282 2.8274631956329 -3.58174607718578 0.00910280138773935 0.00143748110738835 0.746429713794626 0.13081078077234 FALSE FALSE FALSE FALSE Butyrivibrio -0.324453796465585 0.541785525361976 0.0817144949946489 0.286288576248831 -3.97057824914456 1.89244549140193 0.157067732506232 0.309474729165977 1 1 FALSE FALSE TRUE TRUE Neisseria 0.0110440889206607 -0.179076804991529 0.655270731987212 0.897616155052019 0.0168542380752574 -0.199502653760895 0.986719905327999 0.843883948448021 1 1 FALSE FALSE TRUE TRUE Capnocytophaga -0.0825258611998215 -0.225570817751009 0.291076415260957 0.563509734227255 -0.283519573806195 -0.400296222141284 0.779209964958837 0.692479243207626 1 1 FALSE FALSE TRUE TRUE Phocaeicola -0.737457955412114 1.9914058044876 0.0769990141325906 0.327648006134198 -9.57749866955736 6.0778816510544 0.0107266461078572 0.026018592118945 0.858131688628574 1 FALSE FALSE FALSE FALSE Parvimonas 0.137360292974698 -0.74592282589611 0.431334424439031 0.651939177671782 0.318454278610711 -1.14416014782232 0.753285868873243 0.265431862936737 1 1 FALSE FALSE FALSE FALSE Bacteroidetes_[G-3] -0.775574111760221 2.8451697337538 0.196027324718721 0.350195047357756 -3.95645919706902 8.12452875967487 0.0167271837454104 0.0012483058813221 1 0.116092446962956 FALSE FALSE FALSE FALSE Stomatobaculum 0.226699701767758 -1.13825859327393 0.570718305551528 0.706027226472095 0.3972182065348 -1.61220212280145 0.695877182440999 0.124312912214982 1 1 FALSE FALSE FALSE FALSE Olsenella 0.410469032152195 -1.2000881618107 0.385589125125693 0.620127819750445 1.0645244002107 -1.9352270992997 0.30289343098995 0.070840339533896 1 1 FALSE FALSE TRUE FALSE Absconditabacteria_(SR1)_[G-1] 0.0108534664384664 -0.729807616833269 0.177468005984562 0.374208397473766 0.0611573132760088 -1.95027054913815 0.95294343562441 0.0921308253242019 1 1 FALSE FALSE TRUE TRUE Mogibacterium 0.341329099766321 -1.25134209230057 0.448916465913789 0.611925699270572 0.760339897694621 -2.04492488841732 0.456896122607318 0.0557672667438441 1 1 FALSE FALSE FALSE FALSE Filifactor -0.539264118996593 2.33588211685273 0.334155655436714 0.453840814784339 -1.61381113927825 5.14691945007793 0.15060300562039 0.00132852631112209 1 0.122224420623233 FALSE FALSE TRUE TRUE Anaerolineae_[G-1] -0.114648535705757 -0.655860634527225 0.239385573023492 0.38862661974779 -0.47892834249667 -1.68763692758068 0.664731358896616 0.190065243024869 1 1 FALSE FALSE TRUE TRUE Lautropia -0.403804212519955 0.224204172048326 0.60095640642279 0.827657606209712 -0.671935947773002 0.270890003748141 0.510157705643935 0.789557583045804 1 1 FALSE FALSE TRUE TRUE Johnsonella -0.427182381263208 0.463379965928264 0.222539525763355 0.445663616292208 -1.91957981305967 1.03975273948421 0.0812106490304403 0.320769629230494 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-3] -0.337653373483956 0.570136755280082 0.235939825921918 0.393209803732553 -1.4310995278758 1.44995559588811 0.186194220511906 0.181008255366071 1 1 FALSE FALSE TRUE TRUE Cardiobacterium -0.763911399710389 0.915403856265672 0.461860804049176 0.713815719068656 -1.65398620756104 1.28240921544854 0.114557099125506 0.215125089068926 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-1] -0.504231956443118 0.410242728929833 0.380324994119817 0.498470208184314 -1.32579232035501 0.823003505914926 0.21757164056539 0.431771504929953 1 1 FALSE FALSE TRUE FALSE Fretibacterium -0.384738494255134 0.812678862395145 0.48764761705129 0.664371896577275 -0.788968264792459 1.22322883701421 0.442422959300831 0.240113212223579 1 1 FALSE FALSE FALSE FALSE Weeksellaceae_[G-1] -0.694000246892754 1.45647939124387 0.271821490683055 0.405199099771437 -2.55314708615869 3.59447834920027 0.0433065802699284 0.0114421360840804 1 0.915370886726433 FALSE FALSE FALSE FALSE Shuttleworthia 0.52606239629135 -1.27720467791607 0.31761171693461 0.472969013646479 1.65630664185999 -2.70039821016842 0.125877602346848 0.0206420519696164 1 1 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-1] 0.269350933020213 -0.720256222911725 0.377992243582875 0.553871841394209 0.712583227812076 -1.30040231165876 0.487041247754383 0.213088970308381 1 1 FALSE FALSE TRUE TRUE Lancefieldella 0.539572614928481 -1.24790892309363 0.455476820573671 0.658751830180676 1.18463243475023 -1.89435363352443 0.251569282835033 0.0743607092565999 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-4] -0.590806649990348 -0.0279458654841819 0.0772858262914071 0.290204744897526 -7.64443725765065 -0.0962970660388404 0.0166852388436109 0.93206500189279 1 1 FALSE FALSE FALSE TRUE Ottowia -1.92398191645234 2.91461751768706 0.3304073784902 0.49516360038956 -5.82305977924584 5.88617078354314 0.000115334595140674 0.000105207392342404 0.0108414519432234 0.00999470227252835 TRUE TRUE FALSE FALSE Pseudoramibacter -0.500083008833973 1.44318608203537 0.193840277467326 0.421705148056572 -2.57987150744905 3.4222633721364 0.0417766705290388 0.014104475597187 1 1 FALSE FALSE FALSE TRUE Peptoanaerobacter -1.4009351632783 1.33467963206714 0.213795179270388 0.372177416532766 -6.55269762423656 3.58613815018957 0.00060453930797462 0.0115574274460926 0.0544085377177158 0.915370886726433 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-1] 0.568972260120347 -1.32238531545873 0.189934931992596 0.518092353680734 2.99561673122102 -2.55241233742205 0.00645641531230148 0.0178030787580111 0.555251716857927 1 FALSE FALSE FALSE FALSE Kingella -0.506756750147077 0.315199944675598 0.588231854598316 0.772375816135053 -0.861491512548441 0.408091421418203 0.398697815443866 0.687337475229286 1 1 FALSE FALSE TRUE TRUE Arachnia -0.862457887739268 1.05700830842353 0.528556769255671 0.742525608499046 -1.63172233883941 1.42353111640175 0.115272641058691 0.166943650958938 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-9] -0.450067746418928 0.556694376636301 0.468228378459778 0.626537948407624 -0.96121415771383 0.888524594641339 0.349180010417521 0.385978634713877 1 1 FALSE FALSE TRUE TRUE Porphyromonas 0.205756212663738 -0.875028997306545 0.48316877400373 0.729018219918997 0.425847496225302 -1.20028412651164 0.673862892527807 0.241279654371949 1 1 FALSE FALSE TRUE TRUE Tannerella -0.231940076579855 0.134018840116621 0.33149641122294 0.550697378485614 -0.699675980576061 0.243362044840607 0.492188260679446 0.810203650869608 1 1 FALSE FALSE TRUE TRUE Desulfobulbus -1.61901836657044 2.80559001462705 0.221918605572661 0.410129917502533 -7.29555037709688 6.84073483766207 0.00187667648069042 0.00238929637599448 0.167024206781448 0.210258081087515 FALSE FALSE FALSE FALSE Catonella 0.142961329567029 -0.545572989884777 0.393237645718815 0.543358500741101 0.363549449355755 -1.00407555810879 0.720429252434653 0.328650048495576 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-8] -1.68962163909444 2.32583317846372 0.138879538881497 0.311927242285999 -12.166094823631 7.45633232101997 0.00668841804680964 0.0175154434132757 0.568515533978819 1 FALSE FALSE FALSE FALSE Bifidobacterium 0.160054241467844 -0.771933001504322 0.240894987619068 0.379496042401378 0.664414992813968 -2.0341002678702 0.574777977933925 0.178941042176661 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia -0.897818530638691 0.791559951408157 0.300270245341597 0.510120957921605 -2.99003495873294 1.55171031324262 0.00915662833370081 0.141571570727158 0.746429713794626 1 FALSE FALSE FALSE TRUE Cryptobacterium 0.248038784733587 -0.712964167218529 0.359636654977122 0.519884294296801 0.689692725424125 -1.37139008629389 0.512595502501943 0.212595454301219 1 1 FALSE FALSE TRUE FALSE Peptidiphaga -0.740283858603539 0.786537173489172 0.55720078594198 0.779507886899088 -1.32857647957558 1.00901759521388 0.197019887452755 0.323464241693595 1 1 FALSE FALSE TRUE TRUE Gracilibacteria_(GN02)_[G-1] -1.87283170761268 2.41039627190749 0.114077677564813 0.315756822148046 -16.4171619513259 7.63371082692663 0.000491819657838357 0.00466728353041208 0.0447555888632905 0.392051816554615 TRUE FALSE FALSE FALSE Peptostreptococcaceae_[G-6] -0.616980059147152 1.49470252895185 0.377713318036143 0.523493767301616 -1.63346122491798 2.85524417350065 0.141014119751142 0.0213065841432621 1 1 FALSE FALSE TRUE TRUE Scardovia 0.909272995279451 -2.34982565381635 0.211105630993056 0.365246677205788 4.30719441732636 -6.4335305437766 0.0125738822767286 0.00300227747554906 0.993336699861563 0.258195862897219 FALSE FALSE FALSE FALSE Cutibacterium -0.263254177509004 -0.0785707014358079 0.308408489882351 0.470434400963537 -0.853589269249456 -0.167017338176971 0.426091720836525 0.872843091549245 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-7] 0.0317535335759321 0.0463492208452825 0.30444639495241 0.461716095538796 0.104299259581956 0.100384676412885 0.918994101794358 0.922023004381528 1 1 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-4] -0.395210756775243 1.06231666957466 0.285340572096383 0.420611748854219 -1.38504928994727 2.52564668597227 0.1994024799944 0.0324664486382901 1 1 FALSE FALSE TRUE TRUE Selenomonas 1.0608015370509 -2.22971286833754 0.254912106998783 0.56704276624151 4.16144038641507 -3.93217760825448 0.000376514619581959 0.000665644574363841 0.0346393450015403 0.062570589990201 TRUE FALSE FALSE FALSE Leptotrichia 0.177511794411335 -0.82418904445222 0.491316215157686 0.705441563613686 0.361298465092105 -1.16833071222829 0.720911844732457 0.253694487328383 1 1 FALSE FALSE TRUE TRUE Mitsuokella -0.497802587595145 2.52005863300672 0.333280931093967 0.454784811775538 -1.49364257343242 5.54121106896268 0.232115421987501 0.0115863000432368 1 0.915370886726433 FALSE FALSE TRUE FALSE Saccharibacteria_(TM7)_[G-2] 0.14294734799169 -1.55430603068792 0.321480580980643 0.444714288848191 0.44465313443084 -3.49506653971828 0.686693109559718 0.0396217032760232 1 1 FALSE FALSE TRUE TRUE Colibacter 0.143442730843967 -2.47678238150625 0.270458717850939 0.40288833130898 0.530368301616455 -6.14756543943384 0.648854376089568 0.025454285674037 1 1 FALSE FALSE TRUE FALSE Bacteroidetes_[G-5] -0.542798348392886 1.17707017066257 0.215030591279475 0.433832388391028 -2.52428431305112 2.71319108983084 0.0450258044553612 0.0349575164811808 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-2] -0.0488751635230072 1.1960003851016 0.249399705419746 0.383855541685879 -0.195971215927257 3.11575646361341 0.851101393578323 0.020696465332423 1 1 FALSE FALSE FALSE TRUE Peptostreptococcaceae_[G-5] -0.0747175307533764 1.45736713303144 0.270537547452005 0.432776475282396 -0.276181740601576 3.36748232925663 0.793460353519575 0.0199443909888687 1 1 FALSE FALSE TRUE FALSE Lachnospiraceae_[G-8] -0.394811969501538 0.486851488029284 0.242096631041078 0.418004144583276 -1.63080323672305 1.16470493017395 0.163860526731707 0.296681326342554 1 1 FALSE FALSE TRUE TRUE Fusobacterium 0.206326143519155 -0.912799165317319 0.18194989845028 0.542972793684698 1.1339722927932 -1.68111400043255 0.266774482687533 0.104274662341128 1 1 FALSE FALSE TRUE TRUE Alloprevotella 0.90923977016757 -1.93554586325114 0.287595693878031 0.586020230247436 3.16152080689073 -3.30286526530645 0.00540011756887938 0.00395620467503426 0.469810228492506 0.336277397377912 FALSE FALSE FALSE FALSE Corynebacterium -0.281005057618155 0.0758066575941564 0.459622859312453 0.763221468058002 -0.611381814295548 0.0993245876417032 0.546466592086662 0.92167272890828 1 1 FALSE FALSE TRUE TRUE Eikenella -0.0952417120464587 -0.210838162467202 0.313572748448875 0.543053417410372 -0.303730832853247 -0.388245715260598 0.764470216999794 0.701935987426875 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum 0.755018310737431 -1.62380382639049 0.302287539971877 0.519122209048838 2.49768254029813 -3.12797988235894 0.0200965669639585 0.0047234077732002 1 0.392051816554615 FALSE FALSE FALSE FALSE Propionivibrio -1.04214361118645 0.825414273779725 0.0773892388556687 0.332077879403027 -13.4662599942358 2.48560450718236 4.04338879847882e-05 0.0554588640470791 0.00384121935855488 1 TRUE FALSE FALSE TRUE Bergeyella -2.06342125617224 1.45604864185015 0.0720485535477268 0.311064748181132 -28.6393154972275 4.68085390698884 0.0222198480749771 0.133990817545593 1 1 FALSE FALSE FALSE TRUE Enterocloster 0.524035984370978 -1.3118542800784 0.118312015027273 0.298479703246115 4.42927106135567 -4.39512055865554 0.0473791962390719 0.0480658948456116 1 1 FALSE FALSE FALSE FALSE Brachymonas -1.1259212507859 1.81001850109644 0.0931203626426702 0.28885969666584 -12.0910316372627 6.26608184522992 0.0067708773490066 0.0245353184402381 0.568753697316554 1 FALSE FALSE FALSE FALSE Veillonella 0.795418863183447 -1.81617289470676 0.278291566309584 0.529398756183454 2.85822123081728 -3.43063309744044 0.00866914151884771 0.00218643164059478 0.71953874606436 0.19677884765353 FALSE FALSE FALSE FALSE