taxon lfc_(Intercept) lfc_GroupFemale Healthy Baseline se_(Intercept) se_GroupFemale Healthy Baseline W_(Intercept) W_GroupFemale Healthy Baseline p_(Intercept) p_GroupFemale Healthy Baseline q_(Intercept) q_GroupFemale Healthy Baseline diff_(Intercept) diff_GroupFemale Healthy Baseline passed_ss_(Intercept) passed_ss_GroupFemale Healthy Baseline Lachnospiraceae_[G-3] 0.478793345675931 -1.23581685580798 0.281794662260748 0.403968585185851 1.69908592957271 -3.05919049432871 0.103401929839564 0.00574721634662997 1 0.471271740423657 FALSE FALSE FALSE TRUE Ruminococcaceae_[G-2] 0.263596667139149 -0.637556735944215 0.379768384690817 0.453587137729674 0.694098502574804 -1.40558821648991 0.499836662695928 0.183293402073854 1 1 FALSE FALSE FALSE FALSE Actinomyces -0.089463946134341 0.441076671396019 0.179027748836311 0.354272670646222 -0.499721114273406 1.24502031328428 0.620490222524723 0.221637404604529 1 1 FALSE FALSE TRUE TRUE Dialister 0.138468181935575 0.197449666983351 0.339953235501548 0.508587466618938 0.407315381867999 0.388231484145658 0.687110542763843 0.701005444536801 1 1 FALSE FALSE FALSE FALSE Haemophilus -0.101214630355088 0.560573587934623 0.326575182193161 0.582215294716626 -0.309927501763506 0.962828687294214 0.758911091161113 0.343875603276711 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum 0.818383860552502 -1.47480260749487 0.343222129035371 0.504608657649093 2.38441461467702 -2.92266608021706 0.0234097186123681 0.00642731740840456 1 0.520612710080769 FALSE FALSE TRUE TRUE Granulicatella 0.181864448607425 -0.0480935042231285 0.283150232909938 0.49986002449159 0.642289595662354 -0.0962139436376106 0.525407048742338 0.923969973110643 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-5] -0.314681600061897 0.74837200909257 0.229999271556578 0.461402938691465 -1.36818520307569 1.6219489438341 0.201207876567808 0.135880093239009 1 1 FALSE FALSE TRUE TRUE Slackia -0.0725241702590406 1.35955371706564 0.161935801717206 0.335265087892606 -0.44785754286561 4.05516042726505 0.661628433726544 0.00136309933976845 1 0.117226543220087 FALSE FALSE TRUE FALSE Streptococcus 0.00518867396117797 0.240635828840801 0.252718552784126 0.457209032955728 0.0205314327104831 0.526314686490679 0.983739457634937 0.602086328300426 1 1 FALSE FALSE TRUE TRUE Veillonellaceae_[G-1] 0.188853668173303 0.151452894775068 0.224119324162322 0.372538213323843 0.842647856802042 0.406543246728387 0.408493393959771 0.688271266271875 1 1 FALSE FALSE TRUE FALSE Tannerella 0.362113932770416 -0.436548591423167 0.342369854754052 0.51609861063046 1.05766885647846 -0.845862752643114 0.299934805883925 0.405347062507285 1 1 FALSE FALSE TRUE FALSE Peptococcus 0.165966833181654 -0.304211154868891 0.305960404140521 0.445145261073294 0.542445463320243 -0.683397491720801 0.594987221558082 0.504132718591701 1 1 FALSE FALSE TRUE TRUE Bacteroidales_[G-2] 0.52005245983924 -1.01655952475663 0.280620238533493 0.48887453955608 1.85322506515213 -2.07938733254489 0.0794459429735164 0.0513651963633344 1 1 FALSE FALSE TRUE FALSE Eggerthia 0.450661531753914 0.141327266699849 0.250280255737734 0.375019948426561 1.80062758216995 0.376852664219073 0.213561741406036 0.742510194633097 1 1 FALSE FALSE TRUE TRUE Riemerella -0.186938225883991 0.707108514470594 0.302622916824662 0.446938641410114 -0.617726601294713 1.58211541575289 0.542573184514869 0.126713526378251 1 1 FALSE FALSE TRUE TRUE Rothia -0.709975879885101 1.75510194286822 0.368180587483584 0.731094709578962 -1.9283359960328 2.40064921804588 0.0621978223969477 0.0219845266423438 1 1 FALSE FALSE TRUE TRUE Solobacterium 0.429014113702282 -0.593881813471319 0.276466987595954 0.449185259856941 1.55177338687999 -1.32213112616488 0.135657532435812 0.200345525480547 1 1 FALSE FALSE TRUE FALSE Abiotrophia 0.339225223576749 -0.561153294212632 0.26323093913553 0.444502229510846 1.28869814730286 -1.26243077527452 0.210315474598177 0.219444586451278 1 1 FALSE FALSE TRUE FALSE Peptostreptococcus 0.238548218761381 -0.126522984660347 0.321623688680511 0.491819545599179 0.741699778831734 -0.257254893166569 0.469017434837422 0.800261119853442 1 1 FALSE FALSE TRUE TRUE Erysipelotrichaceae_[G-1] 0.487725557407464 0.0607952048770783 0.171726249615924 0.322161774956649 2.84013398358313 0.18871017483455 0.0250398018156244 0.855674540979739 1 1 FALSE FALSE FALSE TRUE Oribacterium 0.144745145107341 0.389122316540076 0.263373216092794 0.487899225630506 0.549581871895217 0.797546493412074 0.587684336309722 0.432954170830307 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-6] -0.126130697045117 0.485790937179778 0.209768082801246 0.319981621902984 -0.601286408116841 1.51818387034449 0.5624858455872 0.163282191171457 1 1 FALSE FALSE TRUE FALSE Megasphaera -0.058308085041895 0.646896260237979 0.278461031561509 0.404291247062498 -0.209394056737219 1.60007485924615 0.837968116706603 0.137886960989512 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-7] 0.12854634623551 -0.043452983692483 0.26593854847611 0.386551693065329 0.483368608921537 -0.112411831255747 0.635000878340814 0.911813584587532 1 1 FALSE FALSE FALSE FALSE Leptotrichia 0.760638674814623 -1.37703606384427 0.293077806024031 0.53155891071142 2.59534723947078 -2.59056152779245 0.0141471219995467 0.0143100163017599 1 1 FALSE FALSE TRUE TRUE Fretibacterium 0.0602988969240132 0.773572414382684 0.292253663368654 0.48395807520307 0.206323836043591 1.59842857061139 0.839312328031355 0.13079499164213 1 1 FALSE FALSE TRUE TRUE Gemella 0.238061715661986 -0.19337268148657 0.359439104082814 0.555680889767152 0.662314458716036 -0.347992319058514 0.512511876811979 0.730124802453156 1 1 FALSE FALSE TRUE TRUE Campylobacter 0.445290722852636 -0.662247372730434 0.212447325147214 0.43336326043044 2.09600531587807 -1.52815762940461 0.0440777054920281 0.136298910267034 1 1 FALSE FALSE TRUE FALSE Mycoplasma 0.244289642480311 0.614338099513595 0.204082630413318 0.312546886310909 1.1970133959248 1.96558700924787 0.317266047892494 0.144065041907738 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-1] 0.578248103897615 -0.906252005535531 0.259378143486436 0.502774055192289 2.22936326139544 -1.80250352255931 0.0334259847730846 0.0815218001868513 1 1 FALSE FALSE FALSE TRUE Anaeroglobus -0.0416743166582214 1.21635333264928 0.282142945442874 0.38856126023703 -0.147706392562132 3.13040299464563 0.888346100215731 0.0259456345420749 1 1 FALSE FALSE TRUE FALSE Butyrivibrio 0.632904464358917 -1.45258573244106 0.249847371069091 0.347254917402076 2.53316439412884 -4.18305302429787 0.0851876338880631 0.024897090747701 1 1 FALSE FALSE TRUE FALSE Neisseria 0.785441458091948 -1.37091683266178 0.294744053437971 0.620731486571139 2.66482546104104 -2.20855049618087 0.0130579447441904 0.0362250335262335 1 1 FALSE FALSE FALSE FALSE Capnocytophaga 0.486718117754141 -0.75614946784051 0.234743644799624 0.489075446046891 2.07340274608755 -1.54607939112939 0.0462663458797048 0.131919014223814 1 1 FALSE FALSE TRUE FALSE Phocaeicola -0.29233603738404 1.46055306061494 0.120743656939164 0.299166416654232 -2.42112956319794 4.88207559173664 0.136514305754892 0.0394873103083185 1 1 FALSE FALSE TRUE FALSE Parvimonas 0.280343281722393 -0.200491382239386 0.462299783627229 0.632984325716924 0.606410151271983 -0.316739884533961 0.549501064816148 0.753970220188676 1 1 FALSE FALSE TRUE TRUE Stomatobaculum 0.0471084924161087 0.4456593952438 0.46608306032265 0.576550356042533 0.101073170055778 0.772975665651871 0.920407878159348 0.447762691691971 1 1 FALSE FALSE TRUE FALSE Olsenella 0.201987532760231 -0.0792998029732395 0.343750202378083 0.550647210973998 0.587599749361223 -0.144011994236695 0.562784194499903 0.886802050882223 1 1 FALSE FALSE TRUE FALSE Mogibacterium 0.126668328266849 0.098518376593576 0.266171753730089 0.435966246883784 0.475889445411617 0.225977073449538 0.6388448294522 0.823305473229037 1 1 FALSE FALSE TRUE TRUE Filifactor 0.320001247357078 0.0757437231467404 0.166380624249955 0.286121846081165 1.92330837078925 0.264725410464652 0.126787755419735 0.804302324466124 1 1 FALSE FALSE TRUE TRUE Lautropia 0.362931546095595 -0.629057494462627 0.398680707207517 0.641439619428324 0.910331349208444 -0.980696351471503 0.370703495805951 0.335448936778883 1 1 FALSE FALSE TRUE TRUE Johnsonella 0.578553473979684 -1.1825779153942 0.249323470422029 0.419143867918887 2.32049342567055 -2.82141289878791 0.0359252270740842 0.0135948385964037 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-3] 0.312719509040441 -0.299920946322276 0.282330510697631 0.386851822788096 1.10763625322577 -0.775286372339421 0.288092460171976 0.452043399612626 1 1 FALSE FALSE TRUE TRUE Cardiobacterium 0.116717204072699 -0.00592743810802547 0.326205277081078 0.583703996362253 0.357802930464823 -0.0101548698397926 0.723174000527498 0.991969734843538 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-1] -0.0664673264610382 0.72569541261799 0.405566946702325 0.480162100346719 -0.163887434618343 1.51135504466924 0.871872134517529 0.150195735506044 1 1 FALSE FALSE FALSE FALSE Weeksellaceae_[G-1] 0.218600823316375 -0.220510595517756 0.250127235833632 0.344233579325142 0.873958497913331 -0.640584210146086 0.395917890136443 0.531457788475587 1 1 FALSE FALSE FALSE FALSE Shuttleworthia -0.111362794013294 0.895879047862306 0.173329294381214 0.333767928059147 -0.642492628905343 2.68413760744426 0.530934928765906 0.0178008619217989 1 1 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-1] -0.0519767959344745 0.730258091763934 0.315137611501278 0.46653126077266 -0.164933648150924 1.56529294640298 0.870738338659025 0.134017672637562 1 1 FALSE FALSE TRUE TRUE Lancefieldella 0.220252407735749 -0.0489548055980137 0.369659057462689 0.555231734778598 0.595825811079928 -0.0881700424013672 0.557110122961154 0.930504734747275 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-4] 0.272339018045486 -0.773997310370998 0.185300991836704 0.30085918257395 1.46971160459564 -2.57262319118598 0.19203452521205 0.0421858690998831 1 1 FALSE FALSE TRUE FALSE Ottowia 0.216711194478082 -0.446976129571205 0.390744264849972 0.50050571298891 0.554611325034518 -0.893049006178096 0.585310008341925 0.382451136890847 1 1 FALSE FALSE FALSE FALSE Peptoanaerobacter -0.0995300285581514 0.0194691872198589 0.177526139076462 0.304829126266807 -0.560649992592263 0.0638691829035332 0.585352258598324 0.950125993217628 1 1 FALSE FALSE TRUE TRUE Kingella -0.185543799060776 0.647599696431459 0.495691432422985 0.657618539261185 -0.374313104734977 0.984764962920629 0.710894503288152 0.332884768426206 1 1 FALSE FALSE TRUE TRUE Peptidiphaga 0.112511088487147 -0.106843579699766 0.455151577824037 0.663608242990005 0.247194767565199 -0.161003997205283 0.806627522844953 0.873288911120855 1 1 FALSE FALSE TRUE TRUE Arachnia -0.0552565610378617 0.391980233447785 0.32199465265054 0.558155181103984 -0.171607076648666 0.70227823142747 0.864827069624331 0.487582963423295 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-9] 0.713244215962822 -1.39248197813015 0.215846813271137 0.402734620231082 3.30440002867625 -3.45756711288236 0.0029797276288748 0.00204598002217394 0.256256576083233 0.173908301884785 FALSE FALSE FALSE TRUE Desulfobulbus -0.656842446189836 1.62574403419209 0.120167137814643 0.319962924416347 -5.46607382130557 5.08103880209764 0.00544836391189991 0.00707558921702526 0.463110932511493 0.558971548144995 FALSE FALSE FALSE FALSE Aggregatibacter 0.42585865418289 -0.577825336459857 0.345793123422004 0.530253810036477 1.23154170900957 -1.08971463386582 0.230564381556721 0.287124883278526 1 1 FALSE FALSE TRUE FALSE Catonella 0.380291409173183 -0.555564653244457 0.207147779316693 0.367284530350928 1.83584593775337 -1.51262742461174 0.0793431058848279 0.143994658064857 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-8] 0.193640346397322 -0.178627838046602 0.192109455118218 0.30405953337945 1.00796884920715 -0.58747652494646 0.352375468428259 0.578306203756268 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia 0.00544914460246843 0.269557578760663 0.440030747809237 0.569481391413909 0.0123835541711525 0.473338695214263 0.990210657320159 0.639776274870967 1 1 FALSE FALSE TRUE TRUE Cryptobacterium 0.000155698357633997 1.01829719820463 0.252369994961203 0.40077997028091 0.000616944806207775 2.54078864642585 0.999524963082389 0.0386195089592243 1 1 FALSE FALSE TRUE FALSE Gracilibacteria_(GN02)_[G-1] -0.22309023546359 1.27725514539538 0.155823220963248 0.293577943614316 -1.43168799928868 4.35065090268962 0.195330014189875 0.00335219012765443 1 0.281583970722972 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-6] 0.0459937138736947 0.866332401024501 0.249095768978871 0.388870303364426 0.184642694102106 2.22781835879256 0.862492851725782 0.0898283095136191 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] 0.499172401878372 -1.4883241480983 0.218755435292318 0.353273769101879 2.28187428216967 -4.21294836546183 0.0356524181126531 0.000585046831509951 1 0.0508990743413657 FALSE FALSE TRUE TRUE Scardovia 0.242621817868779 -0.00712969439695819 0.25642649564039 0.358809707444699 0.946165166212112 -0.0198704055353827 0.375571686005839 0.984701278037901 1 1 FALSE FALSE TRUE TRUE Cutibacterium -2.09891778332524 3.06244444690326 0.119054135306332 0.319680698958485 -17.6299443771913 9.57969766983323 2.13793999987798e-06 7.3949568108062e-05 0.00019027665998914 0.00658151156161752 TRUE TRUE FALSE FALSE Lachnospiraceae_[G-7] -0.0182682585288275 0.897254476830273 0.158177040480576 0.327229126606563 -0.115492479017969 2.74197619916967 0.910590578867955 0.0227738157755322 1 1 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-4] 0.314249047447084 0.298401781681634 0.211525528505169 0.326282529231825 1.4856317800875 0.91455028984901 0.1756808702783 0.387161950731529 1 1 FALSE FALSE TRUE TRUE Selenomonas 0.998080349281662 -1.95822602431633 0.200190398179013 0.497624598727922 4.98565544781606 -3.93514715575184 2.23790593608503e-05 0.000437322151900691 0.00194697816439398 0.0384843493672608 TRUE TRUE TRUE TRUE Saccharibacteria_(TM7)_[G-2] 0.0338849365538755 0.120982251029145 0.143055931490102 0.273429434887287 0.236864953455076 0.442462425740725 0.834812126667142 0.701404900493904 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-5] 0.737648537046332 -0.909772013627589 0.185265660646897 0.376633387586607 3.98157183835722 -2.41553734642919 0.00727018226963151 0.0521790548133059 0.610695310649047 1 FALSE FALSE FALSE TRUE Porphyromonas 0.816063442253224 -1.42995171084328 0.360028616842701 0.607526343630849 2.26666271534123 -2.35372790963639 0.0307827320313307 0.025331880428812 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-2] 0.163268207235063 1.42772050869252 0.219129897559282 0.322417183127287 0.745074994574363 4.42817747752878 0.489745285107028 0.00683967429776969 1 0.547173943821575 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-5] -0.302383600847565 1.52686224944354 0.161467757986595 0.325092600482593 -1.872718148924 4.69669948555257 0.201983277358567 0.0424662004806964 1 1 FALSE FALSE TRUE FALSE Lachnospiraceae_[G-8] 0.339191355939567 -0.0578284972245258 0.292406259523523 0.414803843600652 1.16000032452206 -0.139411671604952 0.284079378446949 0.893051140119853 1 1 FALSE FALSE TRUE TRUE Fusobacterium 0.536663594694917 -0.88484047388947 0.209961356793599 0.506855788572476 2.55601127221939 -1.7457440436491 0.0152277471891808 0.0898873737471785 1 1 FALSE FALSE TRUE FALSE Alloprevotella 0.528915236324458 -0.778658353875101 0.44788054608893 0.644886428548422 1.18092924763792 -1.20743485892204 0.249699204713893 0.239535408577068 1 1 FALSE FALSE TRUE TRUE Treponema 0.452940932888307 -0.698218152193124 0.236926394766175 0.481634648172392 1.91173690603496 -1.44968422608834 0.0655033977344837 0.157521081027392 1 1 FALSE FALSE FALSE FALSE Corynebacterium 0.313666176320205 -0.391980583438107 0.425783908579912 0.699657755336497 0.736679263822709 -0.560246178146894 0.466684312951406 0.579212988290713 1 1 FALSE FALSE TRUE TRUE Schaalia 0.693282597211184 -1.15273741943851 0.312778208139893 0.456932978306595 2.2165310087751 -2.52277133445387 0.0338848941335677 0.0168111687675467 1 1 FALSE FALSE FALSE FALSE Eikenella 0.603865751312512 -1.14322279491722 0.252777334417909 0.461394939636602 2.38892364579714 -2.47775321467035 0.0236244676709389 0.0192899420585719 1 1 FALSE FALSE TRUE TRUE Prevotella 0.968929493310541 -1.84916191910169 0.175167688387082 0.587153817408668 5.53143962926211 -3.14936540353725 4.23120515079087e-06 0.00353426668392138 0.000372346053269597 0.293344134765474 TRUE FALSE TRUE TRUE Bacteroidetes_[G-3] 0.163138772970891 0.611734994820618 0.190106331503026 0.307274000491179 0.858144869142851 1.99084528415277 0.439190971407103 0.117337250121973 1 1 FALSE FALSE TRUE TRUE Propionivibrio 0.072704319011671 0.143574240505392 0.313644161426107 0.421152049800826 0.231805108952426 0.340908326513648 0.820945212631619 0.739594957491609 1 1 FALSE FALSE TRUE TRUE Bergeyella -0.100762079609995 -0.379657300490981 0.16532194779725 0.304630942883791 -0.60949003415789 -1.24628606961903 0.585258729397565 0.301112247562438 1 1 FALSE FALSE TRUE TRUE Brachymonas 0.109447342650294 -0.0391619243005789 0.151689747800346 0.277389137218792 0.721521027211073 -0.141180453903967 0.510510923033972 0.894552058413081 1 1 FALSE FALSE TRUE TRUE Veillonella 0.240386464102866 -0.219215433387232 0.441159464548482 0.597805206756579 0.544896989456854 -0.36670044173184 0.589852553835604 0.716416281056695 1 1 FALSE FALSE TRUE TRUE