taxon lfc_(Intercept) lfc_GroupMale Diseased Baseline se_(Intercept) se_GroupMale Diseased Baseline W_(Intercept) W_GroupMale Diseased Baseline p_(Intercept) p_GroupMale Diseased Baseline q_(Intercept) q_GroupMale Diseased Baseline diff_(Intercept) diff_GroupMale Diseased Baseline passed_ss_(Intercept) passed_ss_GroupMale Diseased Baseline Lachnospiraceae_[G-3] 0.606045521851333 -0.694544944434712 0.457428771562393 0.627396337079572 1.32489593905807 -1.10702741375206 0.19821886461874 0.279726158938779 1 1 FALSE FALSE TRUE TRUE Fretibacterium 0.329712789139575 -0.323075985170493 0.348033766711848 0.58113871140715 0.947358620557524 -0.555936093791116 0.353304112090393 0.583622845216739 1 1 FALSE FALSE TRUE TRUE Ruminococcaceae_[G-2] -0.105331961717658 0.0105842052587051 0.238400778602857 0.38233287074355 -0.441827255493683 0.0276832207445864 0.669039690386725 0.978518936451126 1 1 FALSE FALSE TRUE FALSE Dialister 0.419144808639694 -0.612463891876061 0.408138969304364 0.574951654432719 1.02696591152295 -1.06524415949434 0.314676374039501 0.297365522891669 1 1 FALSE FALSE TRUE TRUE Haemophilus -1.29742122669091 2.60744686141971 0.492539094457572 0.823288141604339 -2.63414872299579 3.1671133466572 0.0135847781731676 0.00370010070036698 1 0.358909767935597 FALSE FALSE FALSE FALSE Lachnoanaerobaculum -0.153386416200908 0.487391859847985 0.409608657582217 0.612700838742995 -0.374470640113656 0.795480973794501 0.710875358883024 0.433025972633424 1 1 FALSE FALSE TRUE TRUE Veillonellaceae_[G-1] 0.0975292181897967 -0.0541495220362148 0.304934282597769 0.457679384019974 0.319836842741769 -0.118313220841626 0.752252292422709 0.906943887517301 1 1 FALSE FALSE FALSE FALSE Prevotella 0.699463291162058 -0.849426210397203 0.316228961045774 0.555079757717014 2.21188878099249 -1.5302777638493 0.034234666706515 0.135774715540957 1 1 FALSE FALSE FALSE TRUE Granulicatella -1.28491008273687 2.48922572453979 0.371968703673137 0.621833846951341 -3.45434997635169 4.00303993863263 0.00177479987519346 0.000416795584252116 0.168605988143379 0.0416795584252116 FALSE TRUE FALSE FALSE Mogibacterium 0.108024559904989 -0.155741894252645 0.410623599115148 0.583407426295243 0.263074407164545 -0.266952197097726 0.794835576143574 0.791884941417991 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-5] -0.51320072740753 1.02935827885105 0.404101975061639 0.632164148565259 -1.26997827053246 1.62830853534997 0.230299342117587 0.131736338258312 1 1 FALSE FALSE TRUE TRUE Slackia -0.14712844125933 0.588828623096849 0.265189637596122 0.436531051491603 -0.554804639400743 1.34888141653349 0.585857084914987 0.194101327230277 1 1 FALSE FALSE TRUE FALSE Peptococcus 0.483635242253578 -0.665352396631076 0.298202083913828 0.487582158666999 1.62183723167184 -1.36459545289779 0.120497356577367 0.187538151850623 1 1 FALSE FALSE TRUE TRUE Capnocytophaga -0.395452307960536 1.06073318412563 0.350993819293247 0.569068252110986 -1.1266645912934 1.86398236097479 0.268530471092158 0.071819374353064 1 1 FALSE FALSE TRUE TRUE Bacteroidales_[G-2] 0.116569421537267 -0.153505984784106 0.346026608673595 0.537463071748828 0.336879935286209 -0.285612152449134 0.739399983266205 0.777847049451469 1 1 FALSE FALSE TRUE FALSE Eggerthia 0.311541525093892 -1.98041719068524 0.49322188332234 0.6044616487652 0.631645787886275 -3.27633224495029 0.572466947986457 0.0465542641293524 1 1 FALSE FALSE TRUE FALSE Riemerella -0.466229371739626 1.23215824985516 0.251272170399389 0.533504330993789 -1.85547556260835 2.3095562271443 0.074899584835246 0.0291135245003719 1 1 FALSE FALSE TRUE FALSE Solobacterium 0.155896562656418 -0.180747616832118 0.270525358868342 0.428593618506017 0.576273378985846 -0.421722603948619 0.571981920065472 0.678512108921289 1 1 FALSE FALSE TRUE TRUE Abiotrophia -0.71015997268629 1.63043681658449 0.380764835121624 0.627905220764179 -1.8650881257442 2.59662885841306 0.0769099253928665 0.017252261209014 1 1 FALSE FALSE TRUE FALSE Peptostreptococcus 0.273061409074102 -0.629709257861364 0.382134306596022 0.510316361514669 0.71456920868079 -1.2339585899075 0.485171157137219 0.235037260910953 1 1 FALSE FALSE TRUE FALSE Johnsonella -0.230422801441769 0.658029534751106 0.434276369153521 0.627609720800722 -0.530590236560424 1.0484693161087 0.603470176726617 0.311023104553777 1 1 FALSE FALSE TRUE TRUE Erysipelotrichaceae_[G-1] 0.585733874133988 -1.56012476126155 0.275140931746554 0.411026087090979 2.12885036921201 -3.79568307282701 0.0773320666558977 0.00901321159825127 1 0.802175832244363 FALSE FALSE TRUE FALSE Oribacterium -0.0962499431211494 0.376988725472956 0.4624228616871 0.623724779068066 -0.208142700319772 0.604415181382133 0.837222540306659 0.552363334192629 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-6] 0.202538298287013 -0.429968872047401 0.234629008718827 0.38917626813482 0.863227865100557 -1.10481780944168 0.413141832008638 0.301355948128041 1 1 FALSE FALSE TRUE TRUE Megasphaera -0.579924653987303 2.15372798507594 0.213862479833099 0.417763300362598 -2.71167085708481 5.15537861560988 0.0265892431515741 0.00086856967744724 1 0.0859883980672768 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-7] -0.135214490102667 0.49930038263428 0.440609177053149 0.599904345431724 -0.306880784932805 0.832299993218012 0.762272043191776 0.415578860592899 1 1 FALSE FALSE TRUE TRUE Leptotrichia 0.166717163173794 0.155417951569925 0.561581906715508 0.716040748728315 0.296870609932687 0.217051825396734 0.7687564524755 0.829741774509648 1 1 FALSE FALSE TRUE TRUE Streptococcus -0.558628770934765 1.2893302951674 0.192336324987696 0.445362679567653 -2.90443716739675 2.8950119853308 0.00661908946854794 0.00677795788299834 0.622194410043506 0.636635151412027 FALSE FALSE FALSE FALSE Gemella 0.0873757918274402 0.172699351151136 0.280002423698263 0.532542211129254 0.31205369822655 0.324292323767027 0.757089014370832 0.747894821413722 1 1 FALSE FALSE TRUE TRUE Campylobacter 0.0235920132160619 0.383334082046904 0.250884932482268 0.437338942919935 0.0940351936748104 0.876514859361798 0.925727908940751 0.387953374764552 1 1 FALSE FALSE TRUE TRUE Mycoplasma -0.288291154431057 0.355711556743392 0.246131164204841 0.415908757392791 -1.17129074395118 0.855263445216307 0.264214605413274 0.40915713517318 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-1] 0.247385469275852 -0.0247598672385964 0.314164065198882 0.527869475125248 0.787440374885793 -0.0469052832288165 0.437412969296313 0.962910247473653 1 1 FALSE FALSE TRUE TRUE Anaeroglobus -0.395035470520295 1.31511358285902 0.472723857101321 0.619040443822912 -0.835657994801869 2.12443887306858 0.414938563569237 0.0486006091294843 1 1 FALSE FALSE TRUE FALSE Butyrivibrio -0.222691812344349 0.740519598997385 0.305140664288225 0.440218979979467 -0.729800509754421 1.68216190731241 0.48920817808273 0.136418419890767 1 1 FALSE FALSE TRUE TRUE Phocaeicola 0.104416707169748 -0.117788731354252 0.237549578322333 0.390540376221777 0.439557535345584 -0.301604490920456 0.669604538038919 0.769132317984924 1 1 FALSE FALSE TRUE FALSE Parvimonas 0.440099831939353 -0.396996636760411 0.412190231853877 0.699358713365316 1.06771048396744 -0.567658097587806 0.294168052816186 0.574491202736995 1 1 FALSE FALSE TRUE TRUE Stomatobaculum -0.094848701102482 0.472831896828529 0.516040877232873 0.675182627223939 -0.183800751620845 0.700302226040103 0.855780577820706 0.49076249272243 1 1 FALSE FALSE FALSE FALSE Lachnospiraceae_[G-2] -0.402328955620478 1.17117776339866 0.316951965905554 0.497608278268937 -1.26936885995011 2.35361390584761 0.260184027000991 0.0652664875754427 1 1 FALSE FALSE TRUE TRUE Pseudoleptotrichia -0.305300461282365 0.812563800861809 0.275475432376015 0.505932809574747 -1.10826747288898 1.60607057989537 0.277893517333863 0.120337134926382 1 1 FALSE FALSE TRUE TRUE Olsenella 0.051506919078431 0.394504056489843 0.404441743421334 0.605181284279367 0.127353122955888 0.651877489832833 0.899721964412621 0.520674721678625 1 1 FALSE FALSE TRUE TRUE Filifactor -0.136995533338078 0.500337636648465 0.560544687850622 0.712509112921609 -0.244397166376476 0.702219280532224 0.809543069354802 0.491056421835375 1 1 FALSE FALSE TRUE TRUE Anaerolineae_[G-1] 0.179395089226306 -0.411814034612244 0.230137877526334 0.433780072009148 0.779511357081055 -0.94936134964623 0.449637482909029 0.359752967380201 1 1 FALSE FALSE TRUE TRUE Lautropia -0.980549140646444 2.16703912031483 0.363143099727118 0.568617944896355 -2.70017285577854 3.81106354409872 0.0134047446312131 0.00101975819794835 1 0.0999363033989381 FALSE FALSE FALSE FALSE Neisseria -0.54387547476924 1.36538032263476 0.505737024777268 0.787366908513752 -1.07541162328142 1.73410935596985 0.290763687475672 0.0931653038846687 1 1 FALSE FALSE TRUE TRUE Saccharibacteria_(TM7)_[G-3] 0.161853659876785 -0.403956759604239 0.291994268444568 0.494628498037482 0.554304235966575 -0.816687192927626 0.588779747985107 0.428819884296516 1 1 FALSE FALSE FALSE FALSE Cardiobacterium -0.365484979783152 1.14731133050992 0.35248709881959 0.554825679885899 -1.0368747707564 2.06787712267728 0.309341958508832 0.0487364698915311 1 1 FALSE FALSE TRUE FALSE Ruminococcaceae_[G-1] 0.382928600861763 -0.729892737129624 0.313403041133663 0.470040410331081 1.22184073095337 -1.55282975907436 0.239464681232428 0.140018301090889 1 1 FALSE FALSE TRUE FALSE Weeksellaceae_[G-1] 0.20152015502284 0.030012296778912 0.264443191796784 0.434621544348702 0.762054616167626 0.0690538634569684 0.456470808227149 0.945752500123146 1 1 FALSE FALSE TRUE TRUE Shuttleworthia -0.405826820616282 1.48951075664948 0.166705068795777 0.327382401730269 -2.43440000683748 4.54975816897052 0.0590596084139594 0.00611385822876979 1 0.58081653173313 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-1] -0.00604887399428621 0.063029175694758 0.35482546520798 0.534544728276971 -0.0170474630132329 0.117911883441304 0.986657613181217 0.907939852058794 1 1 FALSE FALSE TRUE TRUE Lancefieldella 0.167369739452979 -0.159528772272834 0.398880834913454 0.56927207175345 0.419598348186606 -0.280232915311406 0.680726718398153 0.78312662337761 1 1 FALSE FALSE TRUE TRUE Peptoniphilaceae_[G-1] -0.590787750836919 1.13468703380346 0.256241124445532 0.402962559901951 -2.30559303123297 2.81586218352284 0.0545397636360087 0.0259267860641506 1 1 FALSE FALSE TRUE FALSE Saccharibacteria_(TM7)_[G-4] 0.243016082697299 -0.561503611050543 0.147776466728427 0.320796004916618 1.6444843220125 -1.75034477501205 0.175421374713436 0.15495380057649 1 1 FALSE FALSE TRUE TRUE Ottowia 0.866370895522801 -1.0630403366257 0.294180342303949 0.485199295583889 2.94503327019608 -2.19093544920843 0.0100341870723106 0.0446610740779211 0.933179397724883 1 FALSE FALSE FALSE FALSE Pseudoramibacter 0.144108424474843 -0.0233122441935794 0.0853346957300912 0.297940386087506 1.68874363753109 -0.0782446599459414 0.16653806880573 0.941391233629771 1 1 FALSE FALSE TRUE TRUE Peptoanaerobacter -0.17296517147781 0.375709520598268 0.290977523408344 0.458832158552417 -0.594427945677022 0.818838683373033 0.561709889516894 0.426597774009513 1 1 FALSE FALSE TRUE TRUE Centipeda 0.0356533945109994 0.0290493980901498 0.257634161802845 0.403633434103632 0.138387682213833 0.0719697518483848 0.892681102016846 0.944045064010078 1 1 FALSE FALSE TRUE FALSE Rothia -1.77001116809439 3.14627290872478 0.455519058001313 0.732027889582009 -3.88570167812669 4.29802327684716 0.000522256693435778 0.000167369769633459 0.0511811559567062 0.0169043467329794 FALSE TRUE FALSE TRUE Kingella -1.42668274796822 2.61740889989255 0.308244846800832 0.518793493023046 -4.628407458471 5.04518451964525 0.000106830535668208 3.70727439604612e-05 0.0108967146381573 0.00378141988396704 TRUE TRUE FALSE FALSE Arachnia -0.990999268132022 2.01530715948722 0.47879531505141 0.704066579924469 -2.06977645139576 2.8623815090093 0.0468936871886855 0.00747131914042414 1 0.679890041778597 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-9] 0.0552325317653311 0.119390185400823 0.538068570662225 0.67710764266178 0.102649615266236 0.176323789422148 0.918972709543084 0.86130870921695 1 1 FALSE FALSE TRUE TRUE Porphyromonas 0.711590443551178 -0.870042369458706 0.311424004227066 0.523367045291198 2.28495695223398 -1.66239425521074 0.0290880200573381 0.106200175483976 1 1 FALSE FALSE FALSE TRUE Tannerella 0.909757322956879 -1.30490136146055 0.221527637118291 0.527871108283394 4.10674412814275 -2.47200754309895 0.000315415842546629 0.019778974951365 0.0318570000972095 1 TRUE FALSE TRUE TRUE Desulfobulbus 0.641280643419081 -0.940157048599303 0.350275984182879 0.547632599769173 1.83078678635378 -1.71676603802545 0.0920634895875807 0.111697188804793 1 1 FALSE FALSE TRUE TRUE Catonella 0.564205605117574 -0.542202957763292 0.378684052836954 0.542939157168114 1.48991118292615 -0.998644048057498 0.147426961553765 0.326519799959267 1 1 FALSE FALSE TRUE FALSE Saccharibacteria_(TM7)_[G-8] -0.0523209198288807 0.565053630609206 0.0940661095542456 0.2871551155462 -0.556214348364312 1.96776445906044 0.607710082607543 0.120477665710262 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-3] 0.0517086323079366 -0.385162624972148 0.251615776190845 0.408484864374018 0.205506320353763 -0.942905499234078 0.84174962702069 0.370349966754334 1 1 FALSE FALSE TRUE TRUE Bifidobacterium -0.08090154608254 0.876196670816814 0.192427048574735 0.346229746534473 -0.42042710046098 2.53067993026871 0.715038929558464 0.127057997342171 1 1 FALSE FALSE TRUE TRUE Cryptobacterium -0.11295542657351 0.659214668590123 0.253635070638745 0.395736841991747 -0.445346246041794 1.66579049166181 0.686244744734776 0.194345077979813 1 1 FALSE FALSE TRUE TRUE Peptidiphaga -1.0125963604146 1.96196421188659 0.397588649342594 0.640768668136224 -2.54684423735162 3.06189161463414 0.0180247417596215 0.00552374448053937 1 0.53027947013178 FALSE FALSE FALSE FALSE Gracilibacteria_(GN02)_[G-1] 0.0279503928827162 0.20099038919333 0.178379810695794 0.340342444248835 0.156690338293846 0.590553404636124 0.879912384978186 0.573383429578706 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-6] 0.50334129706823 -0.756813959894126 0.383511931191835 0.53823743218509 1.31245277168823 -1.40609685361659 0.206811915226691 0.177710586122815 1 1 FALSE FALSE TRUE TRUE Absconditabacteria_(SR1)_[G-1] 0.0435165967664753 -0.573675153304679 0.221309963520719 0.369296382005732 0.196631891642787 -1.55342749416856 0.847701405337267 0.148602030577892 1 1 FALSE FALSE FALSE FALSE Scardovia 1.19585026801029 -1.0652188846997 0.0853204482358677 0.307133534420165 14.0159867034966 -3.4682597805893 0.000786498322548934 0.0403972932603757 0.0762903372872466 1 FALSE FALSE FALSE FALSE Actinomyces -0.318974139197888 0.881917421214704 0.20192656704715 0.417028643248484 -1.5796541478537 2.11476462226893 0.124021485208449 0.0423312354285205 1 1 FALSE FALSE TRUE FALSE Odoribacter 0.0550497331422793 -0.0566480708275467 0.339239181640575 0.46948674248171 0.162274100757043 -0.120659575024642 0.886002896941055 0.91498964600901 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-7] -0.00695815400335751 0.0428366740680602 0.224855341993916 0.400444155919696 -0.030945024217151 0.106972903549254 0.976177205614968 0.917811786638321 1 1 FALSE FALSE TRUE TRUE Selenomonas 0.91649722419613 -1.21838389655513 0.234679038758446 0.499798970476962 3.90532204769884 -2.43774791171021 0.000456622130127043 0.0205146409023493 0.0452055908825772 1 TRUE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-2] -1.00053790761507 2.13246081791759 0.251942402347637 0.413169026290753 -3.97129621013336 5.16123107547986 0.0285409222395978 0.0141066779357522 1 1 FALSE FALSE FALSE FALSE Propionibacteriaceae_[G-1] -2.35339758676237 3.86112166896352 0.0853204482358677 0.347797126571689 -27.5830429331128 11.1016491338598 0.0013117783157236 0.00801637898014386 0.125930718309465 0.721474108212948 FALSE FALSE FALSE FALSE Bacteroidetes_[G-5] -0.236165550853695 0.876992319663648 0.338206821700061 0.4830359411877 -0.698287366489428 1.81558398637434 0.497299136993938 0.0925607273488404 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-5] 0.0189078965786077 0.569201140063944 0.370445634513762 0.545802799913065 0.0510409485684067 1.04286958614834 0.9600139867856 0.314683246793565 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-8] 0.283576673751335 -0.286625430173936 0.455146818308155 0.629164188331611 0.623044394346047 -0.455565392133961 0.543272219217982 0.655688239611532 1 1 FALSE FALSE TRUE TRUE Fusobacterium 0.0497390815651612 0.207708973171054 0.187126225400756 0.383439069658826 0.265804974469176 0.541700075988262 0.7921492430848 0.591897619924043 1 1 FALSE FALSE TRUE TRUE Alloprevotella 0.239576467623455 -0.424821776643413 0.465386634047636 0.679907695184682 0.514790176803686 -0.624822721749046 0.611048533909895 0.537532767845061 1 1 FALSE FALSE TRUE TRUE Corynebacterium -0.416150138800043 1.0924391991816 0.436503377732096 0.614192833644322 -0.95337209293133 1.77865832901305 0.348859457435953 0.0865590552351371 1 1 FALSE FALSE TRUE TRUE Aggregatibacter -0.102361186210638 0.358789639395132 0.499194542953783 0.69327796164191 -0.205052694696854 0.517526388038356 0.839014354591781 0.608853594929408 1 1 FALSE FALSE TRUE TRUE Schaalia -0.24374693435901 0.754031172988613 0.49696986143129 0.687361402747565 -0.490466229998357 1.09699376481506 0.627150432705159 0.280830871563279 1 1 FALSE FALSE TRUE TRUE Eikenella -0.360255045521768 0.96815546015113 0.339979034415366 0.513612889818374 -1.05963900433234 1.88499058209675 0.297766163266689 0.069150756109576 1 1 FALSE FALSE TRUE TRUE Treponema 0.766733721133937 -0.963785941349399 0.36742783239539 0.668477316202278 2.0867600479129 -1.44176312043737 0.0449616340100548 0.159085077965222 1 1 FALSE FALSE FALSE TRUE Bacteroidetes_[G-3] -0.347893630927248 0.484010096737591 0.387598560883126 0.5202739458621 -0.897561719874779 0.930298548653212 0.385740615565602 0.369170607078142 1 1 FALSE FALSE TRUE TRUE Desulfovibrio -0.698298432494072 1.86726075965474 0.282107573807205 0.492238086429415 -2.47529133326742 3.7934097566473 0.04250223393283 0.00677271437672369 1 0.636635151412027 FALSE FALSE FALSE FALSE Sneathia -0.353003900664527 1.22797667313974 0.197992334472596 0.387795514414568 -1.78291700840259 3.16655718670069 0.172611324908816 0.0506146812716889 1 1 FALSE FALSE TRUE TRUE Lacrimispora 0.853625386033066 -1.74960140372745 0.198694321723093 0.35653433140143 4.29617403572662 -4.907245248586 0.0231951584185508 0.0162018130418446 1 1 FALSE FALSE FALSE FALSE Micavibrio -0.656822012387372 1.03320361014064 0.0853204482358677 0.284989437754692 -7.69829537898808 3.62541018460472 0.0164583037116833 0.0683718561062577 1 1 FALSE FALSE FALSE TRUE Propionivibrio 0.0461404924808849 0.066289000029553 0.173550245827503 0.355394572503396 0.265862443817829 0.186522263304738 0.795262179312906 0.85543064429378 1 1 FALSE FALSE TRUE TRUE Schnuerera 1.24787530627286 -1.41756029610212 0.173759602142004 0.355550946767478 7.18161926529414 -3.98694001236669 0.000368413693059911 0.00722576894489722 0.0368413693059911 0.664770742930544 TRUE FALSE FALSE FALSE Enterocloster 0.0363237676412853 -0.631265962910536 0.166166091991739 0.329629036444469 0.218599157059619 -1.91507996297796 0.835604741134833 0.113643398981742 1 1 FALSE FALSE TRUE TRUE Brachymonas 0.0818580603004261 -0.0669092298144931 0.119063238155036 0.41203501138874 0.687517503881728 -0.16238724371742 0.504828412109318 0.873703274474642 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-2] 0.0995563603738816 -0.502734197878132 0.248786856852129 0.402176185595857 0.400167282281534 -1.2500347257839 0.695531328254163 0.233321908182411 1 1 FALSE FALSE TRUE FALSE Veillonella -0.904022440644435 1.86424214332456 0.508000857790313 0.737197574244707 -1.77956872863704 2.5288229484946 0.0849530425988763 0.0167492797626473 1 1 FALSE FALSE TRUE FALSE Peptostreptococcaceae_[G-4] 0.135862238531025 -0.0873125749281838 0.40295147058479 0.575809527088277 0.337167744626549 -0.151634474284754 0.739503136216465 0.880994374505452 1 1 FALSE FALSE TRUE TRUE