taxon lfc_(Intercept) lfc_DayD22 se_(Intercept) se_DayD22 W_(Intercept) W_DayD22 p_(Intercept) p_DayD22 q_(Intercept) q_DayD22 diff_(Intercept) diff_DayD22 passed_ss_(Intercept) passed_ss_DayD22 Streptococcus salivarius (SP1) -3.16161495137197 6.25932980396582 0.233309362146199 0.479476217324548 -13.5511705243564 13.0545156940057 3.92110709593137e-05 4.70518336411665e-05 0.00925381274639804 0.0111042327393153 TRUE TRUE TRUE TRUE Porphyromonas endodontalis (SP10) 0.212566846343183 0.354511657964304 0.188574427774889 0.421393538523685 1.1272304991265 0.841284038683421 0.310815409389658 0.438559886010271 1 1 FALSE FALSE TRUE TRUE Capnocytophaga sputigena (SP100) 1.16063442290929 -2.61511589883331 0.359014298067571 0.429269685754505 3.23283621058136 -6.09201158529713 0.0481119920756343 0.0088835622136168 1 1 FALSE FALSE FALSE TRUE Mogibacterium diversum (SP101) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella nigrescens (SP104) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fusobacterium simiae (SP105) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Capnocytophaga sp._HMT_864 (SP107) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Schaalia sp._HMT_178 (SP109) 0.867666288634993 -3.67050154423926 0.248648366380466 0.356400705466218 3.48953142650994 -10.2988054960154 0.0732180762170627 0.00929687203000855 1 1 FALSE FALSE FALSE TRUE Schaalia sp._HMT_180 (SP11) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP110) -1.21784826180313 2.85773809722034 0.137505196567802 0.372285662407727 -8.85674354279855 7.67619703304758 0.000305049983935963 0.000597968419021881 0.0677210964337837 0.131553052184814 FALSE FALSE TRUE TRUE Alloprevotella tannerae (SP112) 1.25898644649438 -3.96461002370427 0.172798036174275 0.320263527204049 7.28588399711112 -12.3792117644989 0.0183219031915854 0.00646231687251358 1 1 FALSE FALSE TRUE TRUE Bacteroidales_[G-2] bacterium_HMT_274 (SP113) 0.00855666869852223 0.71152946884246 0.174239678107186 0.312444171008629 0.0491086117207958 2.27730114645924 0.962734057716727 0.0717799866938839 1 1 FALSE FALSE TRUE FALSE Tannerella serpentiformis (SP114) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Ruminococcaceae_[G-1] bacterium_HMT_075 (SP115) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Neisseria bacilliformis (SP116) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Streptococcus anginosus (SP120) 0.838664794968823 -0.741159752130567 0.425364324731033 0.546621410279938 1.97163877224337 -1.35589228338312 0.105702218324729 0.233154072346635 1 1 FALSE FALSE TRUE TRUE Campylobacter concisus (SP121) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella melaninogenica (SP122) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Porphyromonas sp._HMT_284 (SP123) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Streptococcus oralis (SP124) 0.158579330433113 0.448989810806926 0.188816648537302 0.521392213357158 0.839858834809183 0.861136394646085 0.43928771209885 0.428516967373282 1 1 FALSE FALSE TRUE TRUE Capnocytophaga gingivalis (SP125) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bifidobacterium dentium (SP126) 0.4378781002628 -1.16800944417965 1.09728903536465 1.11428067775927 0.399054475302659 -1.04821834165555 0.728430322058847 0.40453304519572 1 1 FALSE FALSE TRUE FALSE Prevotella sp._HMT_317 (SP127) 1.22583995303574 -4.46970086568122 0.214699272477813 0.33773063502561 5.70956733522428 -13.2345141427348 0.0293326383226487 0.00566088111206891 1 1 FALSE FALSE TRUE TRUE Slackia exigua (SP129) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Streptococcus intermedius (SP13) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella maculosa (SP130) 0.983292893026003 -4.1330079618033 0.167628895909018 0.318663153753739 5.86589136493324 -12.9698332333624 0.0278538965337487 0.00589222773632619 1 1 FALSE FALSE TRUE TRUE Streptococcus mitis (SP132) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Solobacterium moorei (SP133) -2.55913450991272 5.20498903141214 0.226056188006066 0.339853460344222 -11.3207894571948 15.3153921873864 9.40332904621044e-05 2.15291779132716e-05 0.021592406389479 0.00510625166878261 TRUE TRUE TRUE TRUE Gemella morbillorum (SP134) 0.494341004512004 -0.138593118831132 0.286051316899715 0.356096367340973 1.72815496838042 -0.389201158849298 0.144534751309426 0.713151086409374 1 1 FALSE FALSE FALSE TRUE Aggregatibacter sp._HMT_512 (SP136) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Selenomonas infelix (SP137) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptostreptococcus stomatis (SP139) -2.50623489418313 5.11241470388535 0.221308787085852 0.303903527764153 -11.3246063438542 16.822492129321 9.38800277803436e-05 1.35690286269019e-05 0.021592406389479 0.00324299784182954 TRUE TRUE TRUE TRUE Fusobacterium nucleatum_subsp._vincentii (SP14) 1.00689275307704 -1.30270622292729 0.231255004187963 0.474879579040165 4.35403660393284 -2.74323487558749 0.0121186483492301 0.0517330274963567 1 1 FALSE FALSE FALSE TRUE Selenomonas sp._HMT_442 (SP141) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Alloprevotella sp._HMT_473 (SP144) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Treponema sp._HMT_268 (SP145) -0.302227459237882 1.04203880653463 0.411580381445425 0.532863336840127 -0.73430968253757 1.95554607437229 0.515947851661934 0.145483352587169 1 1 FALSE FALSE TRUE TRUE Fusobacterium sp._HMT_370 (SP146) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Gemella haemolysans (SP147) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Streptococcus oralis_subsp._tigurinus_clade_071 (SP148) -0.502242611446366 1.60542820909602 0.145644539639935 0.643722176008691 -3.44841360127897 2.4939768566779 0.0182688479020636 0.0548931732605493 1 1 FALSE FALSE FALSE TRUE Porphyromonas pasteri (SP15) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia sp._HMT_498 (SP155) 0.648145588763069 -2.00907939818072 0.202773482845044 0.332037767701683 3.19640211170201 -6.05075564773031 0.0855091538549703 0.0262432780149682 1 1 FALSE FALSE FALSE TRUE Eikenella corrodens (SP156) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Veillonella atypica (SP157) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Ruminococcaceae_[G-2] bacterium_HMT_085 (SP158) -1.11755022212633 2.68221652778595 0.25773659432223 0.329769778972396 -4.33601687437963 8.13360319476233 0.00745687638472035 0.000456041932733268 1 0.101697350999519 FALSE FALSE TRUE TRUE Prevotella sp._HMT_314 (SP159) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia sp._HMT_212 (SP16) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia sp._HMT_225 (SP160) 0.345054352703849 0.122658521833139 0.158240937203053 0.811593883048105 2.18056312609599 0.151132881106089 0.0810554003087667 0.885779204955376 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-8] bacterium_HMT_500 (SP161) -0.828827623252418 1.94107056342635 0.227561859598814 0.322199195566033 -3.64220799001037 6.02444261232968 0.021921824057374 0.00382509385973217 1 0.772668959665899 FALSE FALSE FALSE FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP162) -1.39503542325247 3.1678156297567 0.211887442342257 0.687735342942396 -6.5838513497138 4.60615505988622 0.00121376005018295 0.00580780026088587 0.257317130638785 1 FALSE FALSE FALSE TRUE Parvimonas sp._HMT_110 (SP164) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Capnocytophaga sp._HMT_335 (SP165) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Veillonellaceae_[G-1] bacterium_HMT_155 (SP167) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Filifactor alocis (SP168) -0.264073713831226 1.18863263826952 0.145419896255782 0.330365664432267 -1.8159393633918 3.59793031249838 0.129081918016983 0.0155772038461372 1 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum umeaense (SP169) 1.08258880799317 -1.5040463362295 0.143367883562712 0.461443451309046 7.55112498762408 -3.25943803506746 0.00164800938913594 0.0310973022808169 0.342785952940276 1 FALSE FALSE FALSE FALSE Granulicatella adiacens (SP17) 2.1326521420083 -3.00563760944965 0.161494135802329 0.429270925833878 13.2057559329504 -7.00172648220016 4.44804209283816e-05 0.000915707682455791 0.0104528989181697 0.200539982457818 TRUE FALSE TRUE TRUE Campylobacter showae (SP173) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia trevisanii (SP174) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Streptococcus gordonii (SP175) 1.74894943236209 -2.99937852010123 0.216377630896703 0.403733316991351 8.08285692524761 -7.42910826000888 0.00127299209527015 0.00175261021265639 0.268601332102003 0.378563805933781 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-8] bacterium_HMT_955 (SP177) -1.03193849499527 2.53239600530659 0.200717822149518 0.43740839067906 -5.14123999525343 5.78954601528139 0.00364154264551735 0.00216470385539661 0.735591614394505 0.456752513488685 FALSE FALSE TRUE TRUE Prevotella marshii (SP178) 0.498804774990003 -0.250033697843897 0.2115925717486 0.354091812442885 2.35738320522258 -0.706126741872145 0.0996360123723213 0.531007277490807 1 1 FALSE FALSE TRUE TRUE Neisseria sp._HMT_018 (SP179) 0.791379645243134 -2.73185963451081 0.196521894539943 0.329264768518707 4.02692863864227 -8.29684769129983 0.0564920023042962 0.0142178541537208 1 1 FALSE FALSE FALSE TRUE Capnocytophaga sp._HMT_412 (SP18) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Bacteroidetes_[G-3] bacterium_HMT_436 (SP180) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Streptococcus cristatus_clade_578 (SP181) 1.47785504937077 -3.40816746498701 0.212310854580389 0.322506367925593 6.96080778484741 -10.567752466126 0.00608316899570482 0.00181007815593285 1 0.389166803525563 FALSE FALSE FALSE TRUE Fretibacterium fastidiosum (SP182) -0.756356773118218 2.05012799202176 0.244328047583936 0.365015169525352 -3.0956608567765 5.61655559325834 0.0269855962341019 0.00247577158075772 1 0.519912031959121 FALSE FALSE TRUE TRUE Porphyromonas gingivalis (SP184) -3.23886595357713 6.39451905782485 0.302256001916577 0.417228391373868 -10.715638177703 15.3261839079759 0.00012260842692545 2.14548389444647e-05 0.0278321129120771 0.00510625166878261 TRUE TRUE TRUE TRUE Prevotella loescheii (SP185) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia sp._HMT_215 (SP187) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Kingella oralis (SP188) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia buccalis (SP190) 1.94485519451114 -2.67699295132962 0.188968803542211 0.559940876444173 10.2919379180845 -4.78084930739383 0.000148889014938668 0.00496690679593641 0.0335000283612003 0.973513732003537 TRUE FALSE TRUE TRUE Streptococcus sanguinis (SP191) 1.9664138007292 -2.71472051221122 0.270124635196826 0.550377091933815 7.27965370243398 -4.93247366577837 0.000765106732946184 0.00435028513814786 0.166793267782268 0.857006172215129 FALSE FALSE TRUE TRUE Streptococcus oralis_subsp._dentisani_clade_058 (SP192) 1.74605593073106 -2.32909423971448 0.206217392999763 0.448208495926958 8.46706432145162 -5.19645267967888 0.000377424368158803 0.00347729564746933 0.0830333609949366 0.712845607731212 FALSE FALSE TRUE TRUE Dialister pneumosintes (SP193) -0.0954791674295032 0.68947867948195 0.158347151370744 0.344809612394468 -0.60297369799823 1.99959239736384 0.579044989429269 0.116170578271445 1 1 FALSE FALSE TRUE TRUE Cardiobacterium hominis (SP194) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fusobacterium sp._HMT_203 (SP196) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Veillonella rogosae (SP2) -0.410318761458027 1.44456147161642 0.177923730373455 0.341676477711805 -2.3061497226749 4.22786339080348 0.0692390194285503 0.00826518647341857 1 1 FALSE FALSE TRUE TRUE Arachnia propionica (SP20) 1.25130950242942 -1.4632879901866 0.194689966839921 0.4747988229319 6.42719048515877 -3.08191157920474 0.00135416975197792 0.0274100327433844 0.283021478163385 1 FALSE FALSE TRUE TRUE Oribacterium sp._HMT_102 (SP203) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Lachnoanaerobaculum saburreum (SP208) 0.612841920262761 -0.345969721394956 0.17500847589123 0.409874725835784 3.50178422583172 -0.844086496647193 0.0172514795527417 0.437131394649882 1 1 FALSE FALSE FALSE TRUE Lautropia mirabilis (SP209) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Johnsonella ignava (SP21) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptococcus sp._HMT_168 (SP210) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Tannerella forsythia (SP212) -1.84906099179599 3.96236037470786 0.159692024841171 0.339868393296312 -11.578918819741 11.6585138626095 8.43080263195603e-05 8.15546897069252e-05 0.0194751540798184 0.0190837973914205 TRUE TRUE TRUE TRUE Peptidiphaga gingivicola (SP213) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-1] [Eubacterium]_infirmum (SP217) 0.633494952725614 -0.382112528204949 0.459136440966392 0.548500689576486 1.37975315440489 -0.696649130012926 0.22617299445961 0.517073238023187 1 1 FALSE FALSE TRUE TRUE Selenomonas noxia (SP22) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP220) -0.78952122913587 2.10816579005265 0.159977493546325 0.261157777331784 -4.93520189392919 8.0723837198781 0.00434003683333133 0.00047251244939284 0.872347403499596 0.10489776376521 FALSE FALSE TRUE TRUE Prevotella oralis (SP221) -0.567040245541602 1.71882406876268 0.175132486387384 0.481665680873577 -3.23777876531335 3.56850017972075 0.0230059715891152 0.0160691846260647 1 1 FALSE FALSE FALSE TRUE Treponema sp._HMT_231 (SP222) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Neisseria subflava (SP225) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Treponema parvum (SP227) -2.10398817106849 3.35467237331455 0.126745054055025 0.32547307831766 -16.6001599569721 10.3070656124757 0.00360926909413052 0.00928218365956977 0.732681626108496 1 FALSE FALSE FALSE FALSE Prevotella denticola (SP229) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_300 (SP23) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Oribacterium sinus (SP230) 0.526524601732828 -1.03476264465807 0.407844372044179 0.472784028921632 1.29099391293254 -2.1886582061967 0.325800290162691 0.160083969043292 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_869 (SP231) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP232) 2.29484060069081 -3.92854992162477 0.20865126949232 0.317764456881268 10.9984502192318 -12.3630879305443 0.000388384326214175 0.000245999591636413 0.0850561674409044 0.0558419073014657 FALSE FALSE FALSE TRUE Bulleidia extructa (SP233) -1.88455477609543 4.02447449723188 0.259217184040595 0.387226399399877 -7.27017687145425 10.3930788382946 0.000769734309390085 0.000142050040939144 0.167032345137648 0.0329556094978814 FALSE TRUE TRUE TRUE Prevotella baroniae (SP235) 0.354187476778615 -0.209854608934287 0.221259646484041 0.379261925744083 1.60077755888561 -0.553323691859044 0.184679914610411 0.609511343870966 1 1 FALSE FALSE TRUE TRUE Shuttleworthia satelles (SP236) 0.131356085985052 0.496630488591034 0.388169674096253 0.617830143914703 0.338398630163158 0.803830135972773 0.748809907003569 0.457991316791483 1 1 FALSE FALSE TRUE TRUE Prevotella micans (SP239) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella oulorum (SP24) 1.72834344130985 -2.95816653799676 0.231174417819818 0.391442448002925 7.47636117183587 -7.5570918613677 0.00171115519031311 0.00164309482047141 0.354209124394814 0.356551576042297 FALSE FALSE FALSE TRUE Corynebacterium durum (SP242) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Aggregatibacter sp._HMT_898 (SP244) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella buccae (SP245) -2.83729885973625 4.95377741815211 0.158790927443137 0.49326994909911 -17.8681421251367 10.0427310181768 5.76526375974877e-05 0.000552800746606247 0.0134330645602146 0.122168964999981 TRUE FALSE FALSE TRUE Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP246) -0.314205675736845 1.27636357160435 0.17704597685425 0.408731016463561 -1.77471231665156 3.12274703947784 0.136118832441194 0.0261708774187904 1 1 FALSE FALSE TRUE TRUE Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP249) 1.1212519259365 -4.68484409344529 0.444387235944421 0.503315863154672 2.52314160993754 -9.30796034140813 0.127678908430254 0.0113461950719142 1 1 FALSE FALSE FALSE TRUE Treponema socranskii (SP25) -0.77581975361638 2.08418820789354 0.200470827603486 0.319843435034934 -3.86998828154131 6.5162763389716 0.0117604024850517 0.00127210812202802 1 0.277319570602109 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_223 (SP254) 1.21264642252752 -1.39562760035829 0.22149136957223 0.476585929755531 5.47491500400005 -2.92838607525444 0.0027700801873895 0.0326939077414303 0.567866438414848 1 FALSE FALSE TRUE TRUE Leptotrichia sp._HMT_417 (SP255) -0.118866288244887 1.0589681098511 0.210008171159137 0.33543093007449 -0.566007920495692 3.15703775324456 0.628426820435564 0.087381699052915 1 1 FALSE FALSE TRUE TRUE Fusobacterium nucleatum (SP26) 1.45760481304114 -2.41668928145935 0.17554131197333 0.895265630129797 8.30348592394365 -2.69941032038611 0.00114879294926202 0.0541273780931274 0.245841691142072 1 FALSE FALSE FALSE TRUE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP260) 0.564553488926225 -0.261464966556019 0.146501072714591 0.644393257411789 3.85357921594247 -0.405753728097955 0.0119576132018759 0.701704028949091 1 1 FALSE FALSE FALSE TRUE Prevotella pleuritidis (SP261) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Actinomyces sp._HMT_170 (SP264) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Schaalia sp._HMT_877 (SP266) 0.737834922454889 -2.367836732948 0.225613368569318 0.343362855263192 3.27035107508797 -6.8960188810552 0.0821437505286925 0.0203873901500833 1 1 FALSE FALSE FALSE TRUE Veillonella tobetsuensis (SP269) -1.26036817273763 2.2298457088734 0.126745054055025 0.411502408946031 -9.94412115040363 5.41879138589889 0.0099618419090612 0.0324095906163243 1 1 FALSE FALSE FALSE FALSE Streptococcus sp._HMT_423 (SP270) -0.27389711904395 1.20582359739179 0.169586373892218 0.497716813041061 -1.61508918881672 2.42271019543057 0.167212645786886 0.0599167643830975 1 1 FALSE FALSE TRUE TRUE Olsenella uli (SP274) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Abiotrophia defectiva (SP277) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Campylobacter gracilis (SP282) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Serratia marcescens (SP283) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Fretibacterium sp._HMT_359 (SP284) -0.731645901617257 2.00688396689508 0.305288402952518 0.405119346805078 -2.39657286205874 4.95380924836622 0.0618824678620472 0.00427088681543924 1 0.845635589456969 FALSE FALSE FALSE TRUE Schaalia odontolytica (SP285) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Selenomonas sputigena (SP29) 1.20010064995743 -5.00023898952902 0.158759124103878 0.316261484128325 7.55925466792191 -15.8104582456843 0.0170537786236912 0.00397662391258206 1 0.799301406428994 FALSE FALSE TRUE TRUE Actinomyces gerencseriae (SP291) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Actinomyces sp._HMT_448 (SP292) 2.28217090857615 -3.90321053739545 0.709097434427521 0.782530727429593 3.218416535971 -4.98793261475683 0.0323291182894135 0.00755471621987474 1 1 FALSE FALSE FALSE TRUE Streptococcus constellatus (SP293) 0.781322378067296 -0.901513476377751 0.341823437574442 0.540744957085962 2.28574840745711 -1.66716945681 0.084250853254785 0.170807862151981 1 1 FALSE FALSE TRUE TRUE Lancefieldella rimae (SP295) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP296) -0.222072834327753 1.11513109913844 0.233300608814497 0.625791685867224 -0.951874216943551 1.78195256396398 0.384873332084461 0.134855363610549 1 1 FALSE FALSE TRUE TRUE Bacteroidetes_[G-3] bacterium_HMT_280 (SP297) -3.5302742476966 5.99324050009263 0.140818228487519 0.404232015977915 -25.0697248901232 14.8262390488636 1.50300431100169e-05 0.000120495098710479 0.00359218030329405 0.0280753579995417 TRUE TRUE TRUE TRUE Phocaeicola abscessus (SP298) -1.00256795945259 2.20168106772662 0.221473997403256 0.359751737085977 -4.52679759794616 6.12000121406068 0.0106031957489354 0.00361029748014008 1 0.736500685948577 FALSE FALSE FALSE FALSE Veillonella parvula (SP3) 0.100300974731991 0.55097693328389 0.163293198231761 0.691258072240545 0.614238534232361 0.797064013296846 0.565927444146034 0.461569075614291 1 1 FALSE FALSE TRUE TRUE Peptoanaerobacter [Eubacterium] yurii (SP30) -1.87489207097529 4.00756476327163 0.177302545971583 0.389421838412899 -10.5745355245817 10.2910632326235 0.000130695282517309 0.000148949850163162 0.0295371338489118 0.0344074153876905 TRUE TRUE TRUE TRUE Tannerella sp._HMT_808 (SP303) 1.68078662744434 -2.43932885960823 0.271814227999394 0.584231840098767 6.18358589914612 -4.17527545091662 0.00347555245122318 0.0139715018651913 0.709012700049528 1 FALSE FALSE FALSE FALSE Fusobacterium sp._HMT_204 (SP31) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP311) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Actinomyces massiliensis (SP312) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Neisseria perflava (SP314) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Capnocytophaga sp._HMT_878 (SP318) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Actinomyces johnsonii (SP32) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Lacticaseibacillus rhamnosus (SP322) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Streptococcus downii (SP323) 0.548253503812436 -0.232939992606889 0.207365283969247 0.378935143747228 2.6439020713503 -0.614722588945915 0.0457608082630418 0.56563204710774 1 1 FALSE FALSE FALSE TRUE Cardiobacterium valvarum (SP324) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Rothia dentocariosa (SP328) -0.552134890869646 1.69273969808676 0.323618006568799 0.478808820744124 -1.70613154911782 3.53531435669051 0.148696758637708 0.0166453316315322 1 1 FALSE FALSE TRUE TRUE Streptococcus sp._HMT_056 (SP329) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fusobacterium nucleatum_subsp._animalis (SP33) -0.00275945478502191 0.504039254192989 0.177794560354816 0.634586199575667 -0.0155204680025925 0.794280201066503 0.988360233124683 0.471494469081205 1 1 FALSE FALSE TRUE TRUE Peptidiphaga sp._HMT_183 (SP332) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Mogibacterium timidum (SP333) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Anaeroglobus geminatus (SP336) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP337) 0.457194094790805 -0.415867844958667 0.298308080088214 0.430892538111991 1.53262390564683 -0.965131229194273 0.200137563761052 0.389133164502313 1 1 FALSE FALSE TRUE TRUE Capnocytophaga endodontalis (SP34) 0.507879841639383 -0.983229445658532 0.176168110294312 0.444331211053333 2.88292722667516 -2.21283002678944 0.0633774329079131 0.113800863532937 1 1 FALSE FALSE TRUE TRUE Neisseria sicca (SP340) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Rothia aeria (SP341) -0.101850208134822 0.904741503300814 0.165803810681589 0.440378387578803 -0.614281467453221 2.05446390835635 0.56590123995129 0.0951008811784912 1 1 FALSE FALSE TRUE TRUE Streptococcus cristatus (SP344) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Pseudoleptotrichia sp._HMT_221 (SP347) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Olsenella sp._HMT_807 (SP349) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP35) 1.22959511329681 -5.11821684288654 0.20404815024209 0.332621619997435 6.02600470446791 -15.387505006217 0.0264508059637283 0.00419684444564444 1 0.835172044683244 FALSE FALSE TRUE TRUE Arachnia rubra (SP351) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Neisseria flava (SP354) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-2] bacterium_HMT_091 (SP356) -0.955047454330588 4.8915255795956 0.161589966912769 0.316978664629181 -5.91031406576219 15.4317186783469 0.0274537824331622 0.00417298010839189 1 0.834596021678378 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-2] bacterium_HMT_350 (SP359) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Oribacterium sp._HMT_078 (SP36) 1.41995257090348 -3.26341126881876 0.205806608487023 0.319135071399434 6.89945080647404 -10.225799547848 0.00623908329687851 0.00199354345430193 1 0.424624755766311 FALSE FALSE FALSE TRUE Porphyromonas catoniae (SP37) 2.06122331885019 -2.88063716892296 0.130457321686277 0.293301776990539 15.7999818807181 -9.82141055700414 1.84739517448276e-05 0.000186365775758119 0.00439680051526897 0.0426777626486092 TRUE TRUE TRUE TRUE Neisseria elongata (SP38) 0.207838299586144 0.402460485460838 0.298592318949515 0.474912863617926 0.696060435570963 0.847440691319371 0.536470258708115 0.459003511605825 1 1 FALSE FALSE TRUE TRUE Dialister invisus (SP39) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Capnocytophaga leadbetteri (SP4) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Streptococcus sp._HMT_064 (SP40) -0.276856761245784 1.211002971245 0.219118320389323 0.57841919191582 -1.26350348411704 2.09364244508201 0.262116780897745 0.0904804347540869 1 1 FALSE FALSE TRUE TRUE Weeksellaceae_[G-1] sp._HMT_900 (SP42) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Corynebacterium matruchotii (SP43) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fretibacterium sp._HMT_360 (SP44) -1.77379911320782 3.83065208717856 0.266563983927101 0.374131385387081 -6.65430898456602 10.2387883957271 0.00115625785397728 0.000152640022008511 0.246282922897161 0.0351072050619576 FALSE TRUE TRUE TRUE Streptococcus chosunense (SP47) 0.42954551032915 -0.0252010040111388 0.232327755316239 0.317625770020462 1.84887728865827 -0.0793418116216305 0.123727185103803 0.93983836096644 1 1 FALSE FALSE FALSE TRUE Prevotella sp._HMT_472 (SP48) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Veillonella dispar (SP49) 0.922196123857052 -0.887339577684967 0.347390153074434 0.450838989415486 2.65464094389416 -1.96819618204585 0.0451737645369092 0.106168701855777 1 1 FALSE FALSE TRUE TRUE Tannerella sp._HMT_286 (SP50) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Capnocytophaga sp._HMT_380 (SP51) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Capnocytophaga granulosa (SP53) 0.983819012240163 -0.995179632355411 0.216546164313817 0.356190700423419 4.54322991754506 -2.79395175441806 0.00615048201582167 0.0382658484724976 1 1 FALSE FALSE TRUE TRUE Catonella morbi (SP54) 2.32683605978345 -4.15515177494395 0.200576650869051 0.31841428919625 11.6007324367109 -13.0495141578994 0.000315497654193575 0.000199049083959565 0.06972498157678 0.0453831911427809 FALSE TRUE TRUE TRUE Aggregatibacter segnis (SP56) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia sp._HMT_392 (SP59) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Leptotrichia wadei (SP6) 0.547615581342052 -0.231823628283717 0.175665701673115 0.650113584502398 3.11737337525953 -0.356589423463835 0.0263302871083115 0.735953531231776 1 1 FALSE FALSE FALSE TRUE Leptotrichia hongkongensis (SP60) 1.9361084801521 -4.23496263403457 0.155617407081195 0.449876506785354 12.4414647208581 -9.41361144705244 0.00111904314598842 0.00254000410485474 0.241713319533499 0.528320853809785 FALSE FALSE TRUE TRUE Prevotella saccharolytica (SP62) 1.66178859894901 -2.1816264090959 0.248319012034156 0.571026724160413 6.6921521044085 -3.82053293968609 0.00112670343061604 0.0123664099229723 0.242241237582448 1 FALSE FALSE TRUE TRUE Lachnoanaerobaculum orale (SP64) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-4] bacterium_HMT_355 (SP66) -2.04838548974999 4.31117824612735 0.137317919978517 0.342219995301377 -14.9171025170674 12.597680747236 2.45016018286812e-05 5.59717475542115e-05 0.00580687963339744 0.0131533606752397 TRUE TRUE TRUE TRUE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP67) 2.02271638250549 -3.54691242038803 0.162882766767143 0.583802258262021 12.4182344311302 -6.07553734195408 0.000241750054459461 0.00370834852189819 0.0539102621444597 0.752794749945332 FALSE FALSE FALSE TRUE Lachnoanaerobaculum gingivalis (SP68) 0.131919659296835 0.234681026029275 0.257568532179235 0.447475660999118 0.512173044512423 0.524455398323301 0.635512370157255 0.627682315703112 1 1 FALSE FALSE TRUE TRUE Leptotrichia hofstadii (SP69) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptococcus sp._HMT_167 (SP7) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fusobacterium canifelinum (SP70) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP72) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Treponema denticola (SP73) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP74) 1.70950229082372 -2.26512536987664 0.167284436038582 0.575523921052714 10.2191353320487 -3.93576233240385 0.000154055485543364 0.0110065253666526 0.0345084287617135 1 TRUE FALSE TRUE TRUE Prevotella intermedia (SP75) 1.04583737939047 -1.10371177486845 0.272657366949223 0.604686292991091 3.83572023412535 -1.82526342611295 0.0121765771986927 0.127542490980336 1 1 FALSE FALSE FALSE TRUE Riemerella sp._HMT_322 (SP76) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Aggregatibacter sp._HMT_458 (SP78) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fusobacterium hwasookii (SP79) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Neisseria flavescens (SP80) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptoniphilus lacrimalis (SP81) -1.49013288112194 3.33423618102827 0.468893028575331 0.937935072218927 -3.17798045675686 3.55486886010167 0.0245938225292006 0.0163030457467187 1 1 FALSE FALSE FALSE TRUE Parvimonas micra (SP83) 1.26405137936605 -5.2560419071635 0.337607266099639 0.417256297992305 3.74414743488663 -12.5966748314017 0.0645079072195628 0.00624318512935985 1 1 FALSE FALSE FALSE TRUE Porphyromonas sp._HMT_275 (SP84) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Haemophilus parainfluenzae (SP86) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Peptostreptococcaceae_[G-7] bacterium_HMT_081 (SP87) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Porphyromonas sp._HMT_278 (SP89) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Treponema maltophilum (SP9) -1.18711921959361 2.80396227335369 0.249758372570032 0.512632111726422 -4.75307076747044 5.46973591629019 0.00509062588899299 0.00278159673493087 1 0.575790524130691 FALSE FALSE TRUE TRUE Fusobacterium periodonticum (SP90) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Capnocytophaga sp._HMT_336 (SP92) 1.03426384758572 -1.08345809421013 0.594547447143826 0.625224899770864 1.73958168108242 -1.73290938125977 0.142421733061747 0.143651756649051 1 1 FALSE FALSE FALSE TRUE Actinomyces sp._HMT_897 (SP94) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Serratia nematodiphila (SP95) -4.220503645776 6.04025904673509 0.126745054055025 0.585652052590469 -33.2991585134653 10.313733248296 5.95336844229636e-05 0.00194409323600499 0.0138118147861276 0.416035952505068 TRUE FALSE TRUE TRUE Prevotella oris (SP97) 1.37579311789308 -3.15301263629277 0.17971769117181 0.352735977811623 7.65530153944511 -8.93873274808565 0.00462944095290847 0.00295402089614294 0.925888190581693 0.608528304605446 FALSE FALSE FALSE TRUE Actinomyces sp._HMT_169 (SP98) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Actinomyces naeslundii (SP99) 1.73851993770469 -4.0598296858218 0.306305942214308 0.404634436631838 5.67576301372674 -10.0333271671479 0.0108361561583853 0.00210774946709084 1 0.446842887023258 FALSE FALSE TRUE TRUE Corynebacterium glucuronolyticum_nov_97.419% (SPN109) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Porphyromonas sp._HMT_284_nov_97.746% (SPN121) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Desulfovibrio legallii_nov_94.343% (SPN132) 0.565131872333828 -0.469132464910816 0.258451700782248 0.40387426077055 2.18660535265723 -1.16158049789001 0.094047871546297 0.309995722531761 1 1 FALSE FALSE TRUE TRUE Selenomonas noxia_nov_97.446% (SPN14) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella shahii_nov_89.775% (SPN141) -1.11983782328169 2.68621982980783 0.233488125215428 0.320699861451345 -4.79612323859499 8.37611783694321 0.0049003740326529 0.000397149181349152 0.975174432497927 0.0889614166222101 FALSE FALSE TRUE TRUE Lacrimispora xylanolytica_nov_88.613% (SPN151) 1.26286864701421 -1.86460601427157 0.158282668502817 0.419423402926777 7.97856555591071 -4.44564132869118 0.00133747360629076 0.0112846427938919 0.28086945732106 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_300_nov_97.751% (SPN154) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Corynebacterium matruchotii_nov_97.959% (SPN163) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella veroralis_nov_97.755% (SPN174) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Capnocytophaga gingivalis_nov_97.689% (SPN184) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_305_nov_93.456% (SPN194) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Porphyromonas catoniae_nov_97.951% (SPN203) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Lachnospiraceae_[G-2] bacterium_HMT_088_nov_93.096% (SPN22) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE TRUE Capnocytophaga gingivalis_nov_96.218% (SPN26) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_305_nov_93.661% (SPN3) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Capnocytophaga gingivalis_nov_90.546% (SPN4) 0.582904627714142 -0.535205334859157 0.24595223839079 0.502973383592258 2.36999114758196 -1.06408281694092 0.0985047705467077 0.365343739815186 1 1 FALSE FALSE TRUE TRUE Tannerella forsythia_nov_97.308% (SPN64) -4.60346269901717 6.49881109189833 0.126745054055025 0.360393887855119 -36.3206496169754 18.0325230557487 4.59014098493226e-05 0.000371975162294088 0.0107409299047415 0.0836944115161698 TRUE FALSE TRUE TRUE Bacteroides zoogleoformans_nov_96.926% (SPN76) -3.38724163186293 4.97853475795553 0.126745054055025 0.527708880420099 -26.7248426939989 9.43424479419829 0.000114958355404344 0.00252380916504233 0.0262105050321904 0.527476115493847 TRUE FALSE TRUE TRUE Mollicutes_[G-2] bacterium_MOT-188_nov_81.973% (SPN84) -0.905734439363779 2.31153890795149 0.495951079663039 0.617697306554834 -1.82625762197989 3.74218712534776 0.127379456700375 0.0134012583575044 1 1 FALSE FALSE TRUE TRUE Lachnospiraceae_[G-8] bacterium_HMT_500_nov_97.895% (SPN96) -1.27149082804772 2.34511338274858 0.126745054055025 0.366608430310617 -10.0318772793747 6.39677974879529 0.00979085730208255 0.0235777731652259 1 1 FALSE FALSE FALSE FALSE Tannerella serpentiformis_sp._HMT_286 (SPP1) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP10) 0.66981621584772 -0.445674738668636 0.154857618667785 0.849940878046444 4.32536817762047 -0.524359693927185 0.00753226635720048 0.622435169677482 1 1 FALSE FALSE FALSE TRUE Serratia marcescens_nematodiphila (SPP12) -4.0113183439673 7.74631074100765 0.716156982865944 0.888958619201623 -5.60117186585916 8.7139160065343 0.00250589558866833 0.000329480403457988 0.516214491265675 0.0744625711815053 FALSE FALSE TRUE TRUE Streptococcus infantis_infantis_clade_638 (SPP13) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Veillonella denticariosi_dispar_parvula (SPP15) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE TRUE FALSE Veillonella dispar_parvula (SPP16) 0.189483856209964 0.394906890697438 0.176047723657579 0.655497814466752 1.07632096725385 0.6024534056131 0.330952819814884 0.573149544134218 1 1 FALSE FALSE TRUE TRUE Fretibacterium sp._HMT_358_sp._HMT_360 (SPP4) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Prevotella sp._HMT_292_sp._HMT_300 (SPP9) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE Fusobacterium multispecies_sppn3_3_nov_97.845% (SPPN3) NA NA NA NA NA NA 1 1 1 1 FALSE FALSE FALSE FALSE