ANCOM Volcano Plot


ANCOM statistical results

W
Prevotella vespertina (SP265) 24
Streptococcus cristatus (SP19) 17
Prevotella histicola (SP262) 7
Alloprevotella rava (SP78) 6
Catonella morbi (SP8) 6
Prevotella melaninogenica (SP90) 5
Streptococcus oralis (SP283) 3
Streptococcus sp. HMT074 (SP98) 3
Prevotella pleuritidis (SP150) 3
Lachnoanaerobaculum multispecies_spp17_2 (SPP17) 2
Lachnoanaerobaculum sp. HMT089 (SP200) 2
Hallella seregens (SP231) 2
Selenomonas noxia (SP27) 2
Lancefieldella rimae (SP193) 2
Slackia exigua (SP46) 2
Prevotella oris (SP116) 2
Bulleidia extructa (SP251) 2
Capnocytophaga leadbetteri (SP183) 2
Porphyromonas endodontalis (SP99) 2
Olsenella sp. HMT807 (SP34) 2
Prevotella sp. HMT305 nov_93.865% (SPN69) 2
Rothia dentocariosa (SP74) 1
Leptotrichia sp. HMT215 (SP83) 1
Streptococcus constellatus (SP82) 1
Fusobacterium nucleatum (SP80) 1
Olsenella uli (SP197) 1
Porphyromonas pasteri (SP75) 1
Actinomyces massiliensis (SP58) 1
Leptotrichia trevisanii (SP205) 1
Bifidobacterium longum (SP206) 1
Leptotrichia wadei (SP7) 1
Campylobacter showae (SP69) 1
Stomatobaculum sp. HMT910 (SP170) 1
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP235) 1
Streptococcus sp. HMT057 (SP236) 1
Parvimonas micra (SP240) 1
Fusobacterium sp. HMT204 (SP45) 1
Prevotella veroralis (SP246) 1
Peptidiphaga gingivicola (SP43) 1
Mogibacterium diversum (SP261) 1
Shuttleworthia satelles (SP35) 1
Solobacterium moorei (SP290) 1
Dialister invisus (SP18) 1
Prevotella nigrescens (SP266) 1
Streptococcus sp. HMT066 (SP298) 1
Porphyromonas sp. HMT284 nov_97.131% (SPN102) 1
Oribacterium multispecies_spp14_2 (SPP14) 1
Alloprevotella tannerae (SP12) 1
Veillonella rogosae (SP168) 1
Oribacterium sp. HMT078 (SP115) 1
Fusobacterium periodonticum (SP132) 1
Fretibacterium fastidiosum (SP111) 1
Mogibacterium timidum (SP109) 1
Actinomyces israelii_nov_97.410% (SPN80) 1
Prevotella sp. HMT317 (SP128) 1
Haemophilus parainfluenzae (SP148) 1
Actinomyces sp. HMT175 nov_97.746% (SPN11) 1
Selenomonas dianae_nov_97.830% (SPN103) 1
Prevotella denticola (SP152) 1
Bifidobacterium dentium_nov_97.240% (SPN58) 1
Corynebacterium matruchotii (SP163) 1
Streptococcus gordonii (SP102) 1
Streptococcus downii (SP97) 1
Actinomyces dentalis (SP16) 1
Actinomyces sp. HMT175 (SP127) 1
Gemella sanguinis (SP159) 1
Leptotrichia sp. HMT225 (SP327) 0
Porphyromonas sp. HMT278 (SP4) 0
Streptococcus parasanguinis_clade_411 (SP48) 0
Prevotella pallens (SP47) 0
Streptococcus australis (SP3) 0
Tannerella multispecies_spp16_2 (SPP16) 0
Peptostreptococcaceae_[G-4] bacterium HMT369 (SP303) 0
Porphyromonas multispecies_sppn6_2_nov_97.536% (SPPN6) 0
Prevotella multispecies_spp2_2 (SPP2) 0
Lachnoanaerobaculum orale (SP44) 0
Streptococcus sobrinus (SP319) 0
Veillonella multispecies_spp5_2 (SPP5) 0
Treponema sp. HMT237 (SP42) 0
Actinomyces sp. HMT897 (SP41) 0
Eggerthia catenaformis (SP39) 0
Capnocytophaga endodontalis (SP328) 0
Veillonella multispecies_spp6_3 (SPP6) 0
Neisseria flavescens (SP321) 0
Leptotrichia sp. HMT417 (SP306) 0
Schaalia meyeri (SP38) 0
Streptococcus intermedius (SP37) 0
Veillonella multispecies_spp8_2 (SPP8) 0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP31) 0
Haemophilus multispecies_spp9_2 (SPP9) 0
Bacteroidetes_[G-5] bacterium HMT511 (SP318) 0
Parvimonas multispecies_sppn4_2_nov_96.842% (SPPN4) 0
Neisseria subflava (SP333) 0
Peptostreptococcaceae_[G-1] [Eubacterium]_infirmum (SP324) 0
Treponema denticola (SP96) 0
Stomatobaculum longum (SP50) 0
Treponema multispecies_spp13_2 (SPP13) 0
Streptococcus mutans (SP73) 0
Prevotella jejuni_nov_97.755% (SPN38) 0
Porphyromonas uenonis_nov_94.456% (SPN119) 0
Lacrimispora xylanolytica_nov_88.613% (SPN112) 0
Actinomyces johnsonii (SP299) 0
Schaalia lingnae (SP84) 0
Actinomyces timonensis (SP85) 0
Lachnoanaerobaculum saburreum (SP86) 0
Streptococcus cristatus_clade_578 (SP87) 0
Prevotella jejuni (SP88) 0
Ruminococcaceae_[G-2] bacterium HMT085 (SP89) 0
Gemella morbillorum (SP9) 0
Actinomyces sp. HMT169 (SP93) 0
Lachnoanaerobaculum umeaense (SP94) 0
Lachnoanaerobaculum gingivalis (SP95) 0
Streptococcus multispecies_spp1_2 (SPP1) 0
Selenomonas sputigena (SP72) 0
Corynebacterium durum (SP71) 0
Selenomonas infelix (SP59) 0
Fusobacterium nucleatum_subsp._vincentii (SP52) 0
Veillonella atypica (SP53) 0
Oribacterium sinus (SP54) 0
Streptococcus sp. HMT423 (SP55) 0
Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP57) 0
Streptococcus multispecies_spp11_2 (SPP11) 0
Actinomyces graevenitzii (SP6) 0
Granulicatella elegans (SP70) 0
Actinomyces sp. HMT170 (SP60) 0
Aggregatibacter sp. HMT512 (SP63) 0
Treponema socranskii (SP65) 0
Haemophilus sputorum (SP66) 0
Streptococcus infantis_clade_431 (SP67) 0
Fusobacterium multispecies_spp10_2 (SPP10) 0
Granulicatella adiacens (SP56) 0
Porphyromonas gingivalis (SP1) 0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP296) 0
Neisseria oralis (SP185) 0
Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP160) 0
Leptotrichia sp. HMT392 (SP165) 0
Prevotella maculosa (SP166) 0
Streptococcus mitis (SP17) 0
Bacteroides zoogleoformans (SP172) 0
Haemophilus haemolyticus (SP178) 0
Saccharibacteria_(TM7)_[G-5] bacterium HMT356 (SP179) 0
Alloprevotella sp. HMT473 (SP181) 0
Treponema maltophilum (SP182) 0
Lachnospiraceae_[G-2] bacterium HMT096 (SP188) 0
Desulfobulbus sp. HMT041 (SP295) 0
Rothia mucilaginosa (SP189) 0
Ruminococcaceae_[G-1] bacterium HMT075 (SP190) 0
Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP191) 0
Veillonella sp. HMT780 (SP192) 0
Arachnia propionica (SP194) 0
Riemerella sp. HMT322 (SP195) 0
Actinomyces sp. HMT448 (SP196) 0
Prevotella sp. HMT376 (SP199) 0
Pseudoleptotrichia sp. HMT221 (SP2) 0
Schaalia sp. HMT180 (SP154) 0
Prevotella baroniae (SP151) 0
Veillonella dispar (SP15) 0
Prevotella loescheii (SP147) 0
Johnsonella ignava (SP101) 0
Peptococcus sp. HMT167 (SP104) 0
Leptotrichia buccalis (SP106) 0
Actinomyces sp. HMT525 (SP108) 0
Alloscardovia omnicolens (SP112) 0
Peptostreptococcaceae_[G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP113) 0
Streptococcus salivarius (SP117) 0
Treponema sp. HMT270 (SP118) 0
Schaalia odontolytica (SP123) 0
Prevotella sp. HMT300 (SP126) 0
Scardovia wiggsiae (SP129) 0
Stomatobaculum sp. HMT097 (SP13) 0
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 (SP135) 0
Prevotella buccae (SP139) 0
Veillonella parvula (SP14) 0
Megasphaera micronuciformis (SP140) 0
Capnocytophaga gingivalis (SP142) 0
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP143) 0
Porphyromonas sp. HMT275 (SP144) 0
Prevotella salivae (SP20) 0
Actinomyces oricola (SP201) 0
Prevotella koreensis (SP204) 0
Streptococcus oralis_subsp._dentisani_clade_058 (SP242) 0
Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP248) 0
Prevotella oralis (SP253) 0
Peptostreptococcaceae_[G-5] [Eubacterium]_saphenum (SP258) 0
Schaalia cardiffensis (SP259) 0
Gemella haemolysans (SP26) 0
Streptococcus oralis_subsp._dentisani_clade_398 (SP260) 0
Leptotrichia hofstadii (SP100) 0
Treponema lecithinolyticum (SP268) 0
Streptococcus sanguinis (SP270) 0
Cryptobacterium curtum (SP271) 0
Fretibacterium sp. HMT362 (SP275) 0
Bacteroidetes_[G-3] bacterium HMT365 (SP277) 0
Pseudoramibacter alactolyticus (SP279) 0
Actinomyces sp. HMT414 (SP28) 0
Aggregatibacter aphrophilus (SP280) 0
Anaeroglobus geminatus (SP281) 0
Prevotella intermedia (SP282) 0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP284) 0
Filifactor alocis (SP29) 0
Prevotella oulorum (SP243) 0
Peptostreptococcus stomatis (SP238) 0
Olsenella phocaeensis (SP207) 0
Aggregatibacter segnis (SP237) 0
Streptococcus sp. HMT061 (SP208) 0
Fusobacterium sp. HMT203 (SP21) 0
Lancefieldella sp. HMT199 (SP210) 0
Fretibacterium sp. HMT360 (SP211) 0
Tannerella forsythia (SP212) 0
Alloprevotella sp. HMT308 (SP213) 0
Campylobacter concisus (SP214) 0
Fusobacterium nucleatum_subsp._animalis (SP215) 0
Neisseria flava (SP217) 0
Mycoplasma salivarium (SP218) 0
Peptococcus sp. HMT168 (SP219) 0
Leptotrichia sp. HMT498 (SP220) 0
Neisseria perflava (SP225) 0
Haemophilus parahaemolyticus (SP226) 0
Peptidiphaga sp. HMT183 (SP227) 0
Lancefieldella parvula (SP228) 0
Bacteroidetes_[G-4] bacterium HMT509 (SP229) 0
Clostridiales_[F-1][G-1] bacterium HMT093 (SP230) 0
Campylobacter gracilis (SP234) 0
Prevotella multispecies_sppn8_2_nov_97.755% (SPPN8) 0
Download table as TSV

Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group DIET_1 DIET_1 DIET_1 DIET_1 DIET_1 DIET_2 DIET_2 DIET_2 DIET_2 DIET_2
Prevotella vespertina (SP265) 262.0 307.00 435.5 792.25 1522.0 14.0 21.50 46.5 75.25 94.0
Streptococcus cristatus (SP19) 18.0 22.50 28.0 34.25 41.0 85.0 86.50 209.0 332.50 337.0
Prevotella histicola (SP262) 233.0 251.75 273.0 512.25 1185.0 59.0 59.75 61.0 67.75 85.0
Alloprevotella rava (SP78) 122.0 122.75 132.5 166.75 241.0 27.0 28.50 63.0 101.25 114.0
Catonella morbi (SP8) 30.0 39.00 43.0 49.50 66.0 60.0 73.50 105.5 134.75 140.0
Prevotella melaninogenica (SP90) 1506.0 4374.00 5927.5 6536.75 6572.0 1112.0 1113.50 1213.0 1388.75 1619.0
Streptococcus oralis (SP283) 112.0 135.25 149.0 170.00 215.0 168.0 204.75 323.0 437.00 461.0
Streptococcus sp. HMT074 (SP98) 249.0 576.00 1270.5 2002.25 2441.0 273.0 281.25 427.0 596.75 677.0
Prevotella pleuritidis (SP150) 37.0 37.75 47.0 67.75 103.0 53.0 65.00 103.5 147.75 177.0
Lachnoanaerobaculum multispecies_spp17_2 (SPP17) 7.0 11.50 14.0 15.75 18.0 12.0 17.25 29.5 42.00 48.0
Lachnoanaerobaculum sp. HMT089 (SP200) 6.0 6.75 9.5 16.75 31.0 9.0 16.50 20.0 23.00 29.0
Hallella seregens (SP231) 63.0 71.25 77.5 82.00 85.0 73.0 85.75 160.0 242.25 279.0
Selenomonas noxia (SP27) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 8.0 16.50 21.0
Lancefieldella rimae (SP193) 146.0 154.25 170.5 224.75 347.0 26.0 54.50 133.5 206.50 217.0
Slackia exigua (SP46) 14.0 17.00 22.5 27.50 29.0 7.0 8.50 15.5 22.75 25.0
Prevotella oris (SP116) 244.0 270.25 296.0 402.75 672.0 109.0 131.50 279.0 432.00 471.0
Bulleidia extructa (SP251) 11.0 11.00 11.5 14.00 20.0 5.0 6.50 8.5 11.25 15.0
Capnocytophaga leadbetteri (SP183) 10.0 10.75 11.5 12.00 12.0 13.0 16.75 33.5 50.00 53.0
Porphyromonas endodontalis (SP99) 146.0 157.25 166.0 225.25 388.0 174.0 195.75 245.0 296.00 323.0
Olsenella sp. HMT807 (SP34) 23.0 41.75 53.0 63.75 81.0 20.0 24.50 57.0 101.00 140.0
Prevotella sp. HMT305 nov_93.865% (SPN69) 26.0 56.75 79.5 93.00 96.0 13.0 15.25 22.0 33.50 50.0
Rothia dentocariosa (SP74) 23.0 68.75 95.0 110.25 123.0 67.0 73.00 94.0 114.00 117.0
Leptotrichia sp. HMT215 (SP83) 60.0 160.50 202.5 249.75 366.0 335.0 356.00 374.5 440.75 605.0
Streptococcus constellatus (SP82) 351.0 384.75 397.5 434.75 542.0 214.0 307.00 528.5 791.50 1009.0
Fusobacterium nucleatum (SP80) 204.0 233.25 277.5 339.00 420.0 266.0 314.75 497.5 677.50 718.0
Olsenella uli (SP197) 13.0 13.00 15.5 20.25 27.0 5.0 5.75 12.5 21.75 30.0
Porphyromonas pasteri (SP75) 41.0 74.75 180.5 313.75 430.0 212.0 237.50 312.5 397.00 451.0
Actinomyces massiliensis (SP58) 4.0 10.75 14.0 17.25 24.0 8.0 11.00 30.5 49.50 51.0
Leptotrichia trevisanii (SP205) 21.0 22.50 27.0 35.75 50.0 20.0 26.00 40.5 57.25 70.0
Bifidobacterium longum (SP206) 7.0 10.75 13.5 15.50 17.0 1.0 1.00 9.5 18.25 19.0
Leptotrichia wadei (SP7) 25.0 28.00 29.5 66.00 174.0 26.0 28.25 42.5 56.00 56.0
Campylobacter showae (SP69) 6.0 7.50 8.5 10.50 15.0 7.0 8.50 18.5 29.25 33.0
Stomatobaculum sp. HMT910 (SP170) 10.0 14.50 23.0 41.25 75.0 1.0 6.25 8.0 11.25 21.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP235) 16.0 16.75 19.0 23.75 32.0 5.0 14.75 33.5 50.25 54.0
Streptococcus sp. HMT057 (SP236) 71.0 98.75 114.0 122.75 131.0 101.0 199.25 252.5 295.75 364.0
Parvimonas micra (SP240) 456.0 468.75 499.0 597.00 813.0 369.0 414.00 700.0 999.00 1083.0
Fusobacterium sp. HMT204 (SP45) 10.0 13.75 31.0 52.75 70.0 23.0 23.00 38.5 65.00 98.0
Prevotella veroralis (SP246) 851.0 863.75 877.0 1025.25 1443.0 143.0 174.50 646.0 1122.75 1170.0
Peptidiphaga gingivicola (SP43) 5.0 8.00 12.5 19.00 28.0 5.0 8.75 18.5 35.75 62.0
Mogibacterium diversum (SP261) 226.0 251.50 299.5 465.75 846.0 120.0 156.75 177.0 194.50 223.0
Shuttleworthia satelles (SP35) 44.0 49.25 66.5 111.00 198.0 9.0 11.25 47.5 83.50 85.0
Solobacterium moorei (SP290) 197.0 224.75 252.5 330.50 509.0 128.0 143.00 167.5 192.75 210.0
Dialister invisus (SP18) 53.0 53.00 54.5 75.75 135.0 20.0 31.25 46.5 61.50 72.0
Prevotella nigrescens (SP266) 222.0 279.00 312.0 341.00 386.0 47.0 51.50 187.0 410.75 680.0
Streptococcus sp. HMT066 (SP298) 29.0 83.00 189.5 290.25 327.0 112.0 132.25 210.0 310.75 400.0
Porphyromonas sp. HMT284 nov_97.131% (SPN102) 12.0 24.00 31.5 35.75 38.0 1.0 1.00 10.5 25.25 41.0
Oribacterium multispecies_spp14_2 (SPP14) 15.0 24.75 31.5 51.25 100.0 49.0 50.50 59.0 73.00 91.0
Alloprevotella tannerae (SP12) 299.0 302.75 332.0 430.00 640.0 111.0 149.25 290.5 490.50 705.0
Veillonella rogosae (SP168) 92.0 330.50 457.5 517.00 553.0 391.0 478.00 528.5 565.50 612.0
Oribacterium sp. HMT078 (SP115) 21.0 21.00 21.5 30.00 54.0 15.0 15.75 24.0 36.75 51.0
Fusobacterium periodonticum (SP132) 195.0 346.50 437.5 569.00 842.0 494.0 681.50 769.0 820.00 898.0
Fretibacterium fastidiosum (SP111) 8.0 15.50 19.5 21.50 23.0 12.0 14.25 34.5 56.50 64.0
Mogibacterium timidum (SP109) 54.0 54.75 60.0 69.00 81.0 38.0 43.25 53.0 62.50 67.0
Actinomyces israelii_nov_97.410% (SPN80) 15.0 24.00 28.5 30.75 33.0 13.0 13.75 23.0 33.50 38.0
Prevotella sp. HMT317 (SP128) 57.0 80.25 93.5 101.25 108.0 53.0 66.50 109.5 175.75 259.0
Haemophilus parainfluenzae (SP148) 430.0 1255.00 1836.0 2209.50 2412.0 2068.0 2138.50 3130.5 4368.50 5177.0
Actinomyces sp. HMT175 nov_97.746% (SPN11) 13.0 25.75 33.5 46.00 73.0 25.0 25.75 39.0 59.75 83.0
Selenomonas dianae_nov_97.830% (SPN103) 1.0 1.00 1.0 3.00 9.0 1.0 11.50 17.5 21.50 26.0
Prevotella denticola (SP152) 201.0 224.25 236.0 293.50 454.0 63.0 96.75 182.5 292.00 397.0
Bifidobacterium dentium_nov_97.240% (SPN58) 7.0 7.75 18.5 36.00 57.0 6.0 6.75 16.0 30.25 46.0
Corynebacterium matruchotii (SP163) 35.0 41.00 44.0 52.25 74.0 21.0 26.25 60.0 125.00 224.0
Streptococcus gordonii (SP102) 230.0 246.50 282.0 390.50 626.0 260.0 323.75 366.0 392.25 408.0
Streptococcus downii (SP97) 60.0 112.50 143.0 160.00 172.0 56.0 62.00 91.0 120.50 128.0
Actinomyces dentalis (SP16) 34.0 37.75 54.0 74.00 89.0 23.0 28.25 80.0 151.75 217.0
Actinomyces sp. HMT175 (SP127) 18.0 40.50 65.5 100.25 152.0 51.0 54.00 77.5 134.00 236.0
Gemella sanguinis (SP159) 695.0 2104.25 2607.0 2715.25 2941.0 2577.0 3393.75 3769.5 4014.50 4439.0
Leptotrichia sp. HMT225 (SP327) 1.0 11.50 17.5 21.00 24.0 1.0 1.00 1.0 6.50 23.0
Porphyromonas sp. HMT278 (SP4) 18.0 18.75 29.0 41.25 48.0 9.0 10.50 26.5 50.00 74.0
Streptococcus parasanguinis_clade_411 (SP48) 3794.0 4950.50 5546.5 7268.50 11803.0 2307.0 3624.00 5094.5 6830.25 8943.0
Prevotella pallens (SP47) 112.0 151.00 170.5 265.00 529.0 35.0 101.00 133.0 208.50 405.0
Streptococcus australis (SP3) 146.0 213.50 297.5 383.75 458.0 477.0 531.75 599.0 670.25 737.0
Tannerella multispecies_spp16_2 (SPP16) 1.0 1.00 6.0 12.00 15.0 1.0 7.00 30.0 51.75 54.0
Peptostreptococcaceae_[G-4] bacterium HMT369 (SP303) 14.0 17.00 26.5 35.00 35.0 20.0 28.25 33.0 37.00 43.0
Porphyromonas multispecies_sppn6_2_nov_97.536% (SPPN6) 10.0 17.50 29.0 43.00 58.0 1.0 4.75 21.5 42.75 60.0
Prevotella multispecies_spp2_2 (SPP2) 6.0 6.00 12.0 21.00 30.0 7.0 9.25 11.0 13.25 17.0
Lachnoanaerobaculum orale (SP44) 126.0 187.50 242.0 336.75 519.0 100.0 112.75 161.5 206.75 209.0
Streptococcus sobrinus (SP319) 5.0 9.50 13.0 21.75 42.0 3.0 3.75 10.0 17.50 22.0
Veillonella multispecies_spp5_2 (SPP5) 781.0 837.25 996.5 1515.50 2651.0 571.0 683.50 801.5 911.25 999.0
Treponema sp. HMT237 (SP42) 100.0 103.00 127.0 157.25 179.0 131.0 226.25 299.0 349.25 377.0
Actinomyces sp. HMT897 (SP41) 1.0 4.00 5.5 9.50 20.0 6.0 9.75 15.0 23.00 35.0
Eggerthia catenaformis (SP39) 28.0 44.50 66.0 88.00 106.0 9.0 20.25 35.0 60.00 102.0
Capnocytophaga endodontalis (SP328) 1.0 5.50 10.0 13.25 14.0 5.0 8.00 12.5 17.50 22.0
Veillonella multispecies_spp6_3 (SPP6) 562.0 721.00 813.0 1121.25 1929.0 289.0 379.75 575.0 771.75 867.0
Neisseria flavescens (SP321) 128.0 182.00 207.0 222.00 246.0 88.0 100.00 305.0 573.00 774.0
Leptotrichia sp. HMT417 (SP306) 40.0 46.75 72.5 132.75 243.0 41.0 41.75 50.0 59.25 63.0
Schaalia meyeri (SP38) 8.0 13.25 18.0 22.75 28.0 1.0 7.75 14.0 23.50 40.0
Streptococcus intermedius (SP37) 1.0 1.00 4.0 9.50 17.0 1.0 2.50 12.5 23.75 29.0
Veillonella multispecies_spp8_2 (SPP8) 28.0 67.75 85.0 94.00 109.0 43.0 56.50 74.0 94.25 116.0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP31) 192.0 236.25 258.0 287.50 355.0 155.0 215.00 250.0 301.50 411.0
Haemophilus multispecies_spp9_2 (SPP9) 1.0 1.00 12.5 30.25 49.0 1.0 10.00 13.5 15.25 19.0
Bacteroidetes_[G-5] bacterium HMT511 (SP318) 16.0 19.00 20.5 23.75 32.0 17.0 23.75 31.5 38.00 41.0
Parvimonas multispecies_sppn4_2_nov_96.842% (SPPN4) 23.0 33.50 114.5 196.50 210.0 85.0 220.00 275.5 300.00 342.0
Neisseria subflava (SP333) 1.0 1.00 24.5 76.00 160.0 1.0 1.00 14.5 58.25 149.0
Peptostreptococcaceae_[G-1] [Eubacterium]_infirmum (SP324) 7.0 10.00 16.0 21.25 22.0 1.0 1.00 1.0 3.50 11.0
Treponema denticola (SP96) 37.0 49.00 60.0 81.00 123.0 53.0 93.50 112.0 123.75 144.0
Stomatobaculum longum (SP50) 10.0 24.25 46.0 110.75 254.0 1.0 1.00 15.5 32.75 41.0
Treponema multispecies_spp13_2 (SPP13) 1.0 7.75 11.5 14.75 20.0 1.0 10.75 18.0 23.50 28.0
Streptococcus mutans (SP73) 6.0 8.25 24.5 43.00 52.0 20.0 30.50 55.0 102.50 182.0
Prevotella jejuni_nov_97.755% (SPN38) 13.0 22.75 32.0 57.25 115.0 1.0 4.00 28.5 57.75 75.0
Porphyromonas uenonis_nov_94.456% (SPN119) 5.0 8.00 12.5 17.75 23.0 3.0 9.00 13.0 15.00 15.0
Lacrimispora xylanolytica_nov_88.613% (SPN112) 1.0 1.00 3.0 5.50 7.0 5.0 5.00 5.5 7.25 11.0
Actinomyces johnsonii (SP299) 14.0 19.25 23.0 27.25 34.0 1.0 13.00 31.5 54.00 78.0
Schaalia lingnae (SP84) 360.0 699.00 899.5 1081.00 1363.0 187.0 254.50 494.5 798.75 1059.0
Actinomyces timonensis (SP85) 2.0 2.75 3.0 3.75 6.0 8.0 12.50 14.5 18.00 27.0
Lachnoanaerobaculum saburreum (SP86) 1.0 7.75 12.0 17.75 29.0 1.0 6.25 16.0 33.50 62.0
Streptococcus cristatus_clade_578 (SP87) 346.0 462.25 519.5 543.50 560.0 305.0 542.00 848.0 1194.25 1552.0
Prevotella jejuni (SP88) 11.0 60.50 110.0 190.50 333.0 1.0 24.25 96.0 171.00 204.0
Ruminococcaceae_[G-2] bacterium HMT085 (SP89) 17.0 36.50 52.0 64.00 73.0 14.0 28.25 33.0 35.75 44.0
Gemella morbillorum (SP9) 47.0 85.25 104.0 114.00 126.0 61.0 95.50 244.5 430.75 577.0
Actinomyces sp. HMT169 (SP93) 37.0 47.50 54.0 75.50 131.0 42.0 68.25 83.5 105.25 151.0
Lachnoanaerobaculum umeaense (SP94) 21.0 27.75 32.5 45.25 76.0 19.0 29.50 33.5 35.75 41.0
Lachnoanaerobaculum gingivalis (SP95) 1.0 19.75 36.0 53.25 75.0 34.0 44.50 63.0 88.50 120.0
Streptococcus multispecies_spp1_2 (SPP1) 208.0 264.25 322.5 436.75 661.0 214.0 272.50 320.0 380.25 477.0
Selenomonas sputigena (SP72) 13.0 14.50 18.0 22.25 26.0 1.0 1.00 20.0 41.50 49.0
Corynebacterium durum (SP71) 8.0 10.25 12.0 17.25 30.0 14.0 14.00 55.5 103.25 122.0
Selenomonas infelix (SP59) 1.0 1.00 1.0 6.50 23.0 1.0 1.00 8.0 16.75 22.0
Fusobacterium nucleatum_subsp._vincentii (SP52) 517.0 601.75 680.5 797.75 998.0 683.0 896.75 1094.5 1227.75 1248.0
Veillonella atypica (SP53) 372.0 408.75 497.0 854.00 1697.0 330.0 400.50 455.0 548.25 735.0
Oribacterium sinus (SP54) 97.0 148.00 200.5 275.25 393.0 169.0 178.00 296.5 438.25 517.0
Streptococcus sp. HMT423 (SP55) 153.0 304.50 358.5 442.75 685.0 320.0 328.25 340.5 350.75 353.0
Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP57) 249.0 288.75 318.0 347.75 389.0 237.0 277.50 345.0 413.25 456.0
Streptococcus multispecies_spp11_2 (SPP11) 504.0 2458.50 3642.5 4492.25 5444.0 806.0 1074.50 1350.0 1564.50 1650.0
Actinomyces graevenitzii (SP6) 221.0 231.50 444.5 723.75 933.0 283.0 292.00 325.0 388.50 489.0
Granulicatella elegans (SP70) 1.0 10.75 25.5 62.00 137.0 1.0 6.25 12.0 21.00 36.0
Actinomyces sp. HMT170 (SP60) 1.0 14.50 23.0 30.50 41.0 9.0 13.50 20.5 28.75 37.0
Aggregatibacter sp. HMT512 (SP63) 21.0 26.25 28.5 29.50 31.0 12.0 22.50 55.5 87.00 93.0
Treponema socranskii (SP65) 17.0 23.00 28.5 35.50 46.0 34.0 37.00 38.0 41.00 50.0
Haemophilus sputorum (SP66) 1.0 1.00 3.5 14.00 38.0 11.0 14.00 40.5 67.75 73.0
Streptococcus infantis_clade_431 (SP67) 264.0 669.75 823.5 872.50 964.0 608.0 771.50 922.0 1112.75 1397.0
Fusobacterium multispecies_spp10_2 (SPP10) 1.0 29.50 47.0 60.00 75.0 1.0 48.25 68.5 73.25 74.0
Granulicatella adiacens (SP56) 1070.0 2383.25 3032.0 3564.25 4528.0 1389.0 1721.25 1874.5 1958.75 2084.0
Porphyromonas gingivalis (SP1) 1143.0 1154.25 1271.0 1399.25 1445.0 1398.0 1719.00 1829.5 1981.50 2427.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP296) 22.0 33.25 46.0 58.50 69.0 31.0 37.75 43.0 47.50 52.0
Neisseria oralis (SP185) 7.0 7.75 9.0 11.00 14.0 1.0 10.00 17.5 23.25 27.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP160) 14.0 25.25 29.5 30.25 31.0 14.0 15.50 52.0 90.75 99.0
Leptotrichia sp. HMT392 (SP165) 1.0 1.00 4.0 7.25 8.0 5.0 11.00 17.5 22.25 23.0
Prevotella maculosa (SP166) 1.0 1.00 1.5 7.50 24.0 1.0 1.00 7.0 15.50 23.0
Streptococcus mitis (SP17) 334.0 379.00 679.5 1139.75 1664.0 211.0 293.50 755.5 1233.25 1363.0
Bacteroides zoogleoformans (SP172) 50.0 58.25 75.5 93.50 104.0 78.0 117.00 145.0 160.75 163.0
Haemophilus haemolyticus (SP178) 3.0 5.25 8.5 11.25 12.0 2.0 8.75 12.5 14.25 15.0
Saccharibacteria_(TM7)_[G-5] bacterium HMT356 (SP179) 18.0 30.75 37.0 45.25 64.0 12.0 22.50 37.5 62.75 104.0
Alloprevotella sp. HMT473 (SP181) 132.0 142.50 159.0 176.75 191.0 113.0 134.00 177.0 215.50 223.0
Treponema maltophilum (SP182) 1.0 1.00 4.5 8.75 11.0 1.0 1.00 6.5 12.00 12.0
Lachnospiraceae_[G-2] bacterium HMT096 (SP188) 107.0 128.00 163.0 289.25 584.0 48.0 78.00 103.5 139.00 199.0
Desulfobulbus sp. HMT041 (SP295) 5.0 8.00 12.5 16.00 16.0 15.0 17.25 19.5 21.50 23.0
Rothia mucilaginosa (SP189) 4869.0 11394.00 13960.0 14631.50 15473.0 7133.0 8186.75 9678.5 11836.00 14887.0
Ruminococcaceae_[G-1] bacterium HMT075 (SP190) 16.0 23.50 27.5 34.25 50.0 9.0 9.75 22.0 34.75 37.0
Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP191) 72.0 89.25 96.5 98.50 100.0 73.0 78.25 100.5 122.00 125.0
Veillonella sp. HMT780 (SP192) 13.0 19.75 41.0 86.75 167.0 1.0 4.75 36.0 99.25 199.0
Arachnia propionica (SP194) 27.0 27.75 29.0 35.00 50.0 25.0 40.75 47.5 65.00 113.0
Riemerella sp. HMT322 (SP195) 1.0 6.25 11.0 17.75 29.0 14.0 15.50 17.5 20.75 26.0
Actinomyces sp. HMT448 (SP196) 5.0 7.25 14.0 28.00 52.0 9.0 10.50 16.0 52.50 147.0
Prevotella sp. HMT376 (SP199) 16.0 19.00 22.5 26.75 32.0 23.0 27.50 30.5 36.75 51.0
Pseudoleptotrichia sp. HMT221 (SP2) 1.0 10.00 14.5 29.25 69.0 1.0 4.75 7.5 12.00 21.0
Schaalia sp. HMT180 (SP154) 334.0 398.50 524.5 884.25 1650.0 397.0 455.50 610.5 825.00 1062.0
Prevotella baroniae (SP151) 18.0 21.75 35.0 53.75 74.0 16.0 22.75 44.5 64.25 65.0
Veillonella dispar (SP15) 1019.0 1291.25 1516.5 2119.50 3525.0 527.0 665.00 979.0 1306.00 1483.0
Prevotella loescheii (SP147) 1.0 1.00 5.0 11.75 20.0 5.0 8.75 25.5 46.50 63.0
Johnsonella ignava (SP101) 1.0 1.00 3.5 8.50 16.0 1.0 6.25 11.5 18.25 28.0
Peptococcus sp. HMT167 (SP104) 65.0 83.75 99.5 109.25 110.0 50.0 66.50 75.5 82.25 92.0
Leptotrichia buccalis (SP106) 1.0 1.00 5.5 14.50 28.0 10.0 10.75 19.5 28.25 29.0
Actinomyces sp. HMT525 (SP108) 1.0 4.75 12.0 21.00 30.0 1.0 1.00 11.5 22.75 25.0
Alloscardovia omnicolens (SP112) 1.0 4.75 6.5 8.50 13.0 1.0 1.00 3.5 8.75 17.0
Peptostreptococcaceae_[G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP113) 5.0 8.75 10.5 13.25 20.0 1.0 4.00 13.5 22.00 22.0
Streptococcus salivarius (SP117) 4488.0 4878.00 5806.0 8737.00 15136.0 1570.0 2239.00 4261.0 6612.75 8271.0
Treponema sp. HMT270 (SP118) 1.0 5.50 8.5 11.50 16.0 7.0 13.00 17.0 20.75 26.0
Schaalia odontolytica (SP123) 2138.0 3760.25 5172.0 6053.75 6086.0 2128.0 3282.25 3846.0 4651.50 6531.0
Prevotella sp. HMT300 (SP126) 1.0 1.00 1.0 17.75 68.0 1.0 1.00 1.0 1.00 1.0
Scardovia wiggsiae (SP129) 10.0 16.75 20.0 39.25 94.0 1.0 1.00 6.5 13.50 18.0
Stomatobaculum sp. HMT097 (SP13) 498.0 713.25 1067.5 1423.25 1643.0 434.0 584.00 770.5 977.00 1187.0
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 (SP135) 31.0 32.50 44.0 58.75 70.0 20.0 36.50 46.0 53.50 64.0
Prevotella buccae (SP139) 1.0 16.00 22.0 39.25 88.0 1.0 4.75 12.5 23.25 36.0
Veillonella parvula (SP14) 485.0 512.00 575.5 1018.75 2185.0 493.0 700.00 780.0 791.50 793.0
Megasphaera micronuciformis (SP140) 55.0 59.50 148.5 309.75 531.0 27.0 27.00 57.0 90.00 99.0
Capnocytophaga gingivalis (SP142) 1.0 7.00 13.0 23.75 44.0 32.0 38.75 49.0 62.50 79.0
Saccharibacteria_(TM7)_[G-6] bacterium HMT870 (SP143) 32.0 47.00 54.0 91.00 196.0 1.0 7.75 13.5 21.25 34.0
Porphyromonas sp. HMT275 (SP144) 1.0 12.25 18.0 25.50 42.0 1.0 1.00 13.5 51.00 126.0
Prevotella salivae (SP20) 102.0 114.75 126.5 254.50 616.0 32.0 39.50 54.5 71.25 84.0
Actinomyces oricola (SP201) 7.0 9.25 14.0 20.00 26.0 9.0 15.75 18.5 22.50 33.0
Prevotella koreensis (SP204) 87.0 100.50 138.0 172.50 177.0 146.0 158.75 169.0 195.00 255.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP242) 106.0 164.50 197.5 218.50 241.0 77.0 153.50 223.0 379.25 716.0
Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP248) 29.0 34.25 50.0 78.25 121.0 12.0 42.00 55.5 59.75 62.0
Prevotella oralis (SP253) 4.0 10.75 19.0 25.00 25.0 8.0 17.75 23.5 29.00 38.0
Peptostreptococcaceae_[G-5] [Eubacterium]_saphenum (SP258) 118.0 133.75 162.0 193.50 219.0 120.0 157.50 187.0 221.75 275.0
Schaalia cardiffensis (SP259) 58.0 72.25 85.5 96.25 103.0 70.0 70.00 91.5 113.50 115.0
Gemella haemolysans (SP26) 48.0 116.25 196.0 297.75 432.0 102.0 108.00 211.5 324.75 360.0
Streptococcus oralis_subsp._dentisani_clade_398 (SP260) 55.0 83.50 99.5 106.25 107.0 50.0 92.00 165.5 241.00 289.0
Leptotrichia hofstadii (SP100) 1.0 1.00 5.5 12.25 19.0 1.0 1.00 17.0 39.75 60.0
Treponema lecithinolyticum (SP268) 27.0 30.00 33.0 35.00 35.0 26.0 50.00 59.0 64.25 77.0
Streptococcus sanguinis (SP270) 21.0 23.25 30.0 38.00 44.0 25.0 31.00 48.0 65.00 71.0
Cryptobacterium curtum (SP271) 10.0 17.50 20.5 30.25 58.0 3.0 5.25 9.5 15.50 23.0
Fretibacterium sp. HMT362 (SP275) 12.0 20.25 24.5 29.00 38.0 23.0 37.25 61.0 86.50 106.0
Bacteroidetes_[G-3] bacterium HMT365 (SP277) 12.0 18.75 23.0 27.25 34.0 13.0 13.00 32.5 54.00 60.0
Pseudoramibacter alactolyticus (SP279) 10.0 10.00 13.0 17.00 20.0 10.0 12.25 16.0 19.25 20.0
Actinomyces sp. HMT414 (SP28) 1.0 1.00 1.0 3.75 12.0 1.0 7.75 24.0 44.50 64.0
Aggregatibacter aphrophilus (SP280) 1.0 1.00 6.5 12.75 15.0 6.0 12.75 18.0 31.25 62.0
Anaeroglobus geminatus (SP281) 14.0 17.00 23.5 38.25 66.0 7.0 16.00 34.0 54.00 69.0
Prevotella intermedia (SP282) 1885.0 1956.25 2029.5 2272.25 2852.0 1322.0 2114.75 2603.5 2856.50 2942.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP284) 74.0 79.25 83.5 94.75 121.0 38.0 57.50 67.5 110.25 228.0
Filifactor alocis (SP29) 132.0 162.00 187.0 214.00 250.0 209.0 253.25 269.5 275.75 290.0
Prevotella oulorum (SP243) 1.0 7.75 12.5 25.50 57.0 1.0 4.00 11.5 18.00 18.0
Peptostreptococcus stomatis (SP238) 112.0 150.25 173.0 200.25 252.0 71.0 234.50 315.5 345.50 356.0
Olsenella phocaeensis (SP207) 12.0 16.50 20.5 24.25 28.0 1.0 7.75 11.0 12.50 14.0
Aggregatibacter segnis (SP237) 29.0 29.00 43.5 61.50 72.0 33.0 37.50 137.5 254.50 310.0
Streptococcus sp. HMT061 (SP208) 6.0 21.75 48.0 98.25 186.0 20.0 37.25 45.5 52.75 67.0
Fusobacterium sp. HMT203 (SP21) 1.0 1.00 9.0 19.75 28.0 1.0 7.00 23.5 41.75 53.0
Lancefieldella sp. HMT199 (SP210) 8.0 11.00 14.0 17.25 21.0 1.0 1.00 4.5 8.75 11.0
Fretibacterium sp. HMT360 (SP211) 1.0 8.50 11.5 15.75 27.0 13.0 15.25 20.5 31.50 51.0
Tannerella forsythia (SP212) 89.0 93.50 109.0 127.00 139.0 129.0 132.00 163.0 208.25 254.0
Alloprevotella sp. HMT308 (SP213) 19.0 50.50 84.5 135.50 218.0 36.0 46.50 57.5 72.75 96.0
Campylobacter concisus (SP214) 39.0 64.50 75.5 86.25 111.0 53.0 62.75 73.0 85.75 103.0
Fusobacterium nucleatum_subsp._animalis (SP215) 47.0 52.25 57.0 80.50 142.0 1.0 56.50 75.0 82.25 104.0
Neisseria flava (SP217) 1.0 22.00 50.0 73.50 81.0 11.0 43.25 66.5 81.00 87.0
Mycoplasma salivarium (SP218) 1.0 3.25 5.5 7.00 7.0 1.0 1.00 5.0 9.75 12.0
Peptococcus sp. HMT168 (SP219) 59.0 77.75 103.0 127.50 144.0 30.0 51.00 189.0 320.75 323.0
Leptotrichia sp. HMT498 (SP220) 5.0 15.50 26.0 34.75 40.0 5.0 11.00 15.0 17.75 20.0
Neisseria perflava (SP225) 70.0 151.00 1497.5 2903.75 3164.0 280.0 568.00 715.0 776.75 809.0
Haemophilus parahaemolyticus (SP226) 1.0 1.00 23.5 50.75 65.0 1.0 7.75 25.5 62.25 126.0
Peptidiphaga sp. HMT183 (SP227) 15.0 17.25 19.5 22.75 28.0 13.0 15.25 16.5 23.50 43.0
Lancefieldella parvula (SP228) 195.0 274.50 342.5 546.50 1034.0 112.0 149.50 186.0 214.00 226.0
Bacteroidetes_[G-4] bacterium HMT509 (SP229) 13.0 13.75 15.0 18.75 27.0 26.0 26.75 33.0 42.00 51.0
Clostridiales_[F-1][G-1] bacterium HMT093 (SP230) 24.0 24.75 32.5 41.50 46.0 18.0 54.75 67.5 69.75 75.0
Campylobacter gracilis (SP234) 6.0 11.25 13.0 13.75 16.0 7.0 7.75 15.5 25.75 34.0
Prevotella multispecies_sppn8_2_nov_97.755% (SPPN8) 16.0 16.00 16.5 31.25 74.0 7.0 15.25 19.0 21.25 25.0
Download table as TSV