Taxon	F28297.S31	F28297.S32	F28297.S33	F28297.S34	F28297.S35	F28297.S36	F28297.S43	F28297.S44	F28297.S45	F28297.S46	F28297.S47	F28297.S48
Veillonella dispar (SP10)	59	90	108	102	69	125	95	94	227	120	62	86
Haemophilus pittmaniae (SP101)	632	405	335	821	369	588	156	330	450	200	391	398
Fusobacterium nucleatum (SP103)	1515	871	877	1298	1010	1808	380	307	545	548	572	617
Actinomyces graevenitzii (SP104)	46	49	18	34	63	49	50	60	72	54	84	89
Ruminococcaceae_[G-1] bacterium_HMT_075 (SP108)	21	0	0	12	0	0	0	0	0	0	0	9
Streptococcus sp._HMT_056 (SP109)	29	42	18	44	19	34	15	0	13	8	8	0
Veillonella parvula (SP11)	703	683	561	731	556	858	1065	1198	1450	1672	1180	1082
Lachnoanaerobaculum orale (SP110)	0	0	0	0	0	45	0	0	45	0	0	0
Prevotella melaninogenica (SP111)	776	1080	881	962	761	1142	826	737	1418	1059	1008	1109
Aggregatibacter sp._HMT_458 (SP116)	31	34	0	29	0	0	10	10	57	46	17	15
Fusobacterium hwasookii (SP117)	3051	2651	2459	2607	2510	4342	194	97	139	72	34	187
Campylobacter concisus (SP12)	1889	1573	1543	1887	1381	2308	1824	1652	2231	1541	2350	2501
Prevotella pallens (SP121)	0	23	0	0	11	0	50	40	22	45	39	0
Prevotella salivae (SP125)	194	209	215	253	191	375	99	92	165	123	156	131
Actinomyces sp._HMT_169 (SP126)	0	19	13	27	0	0	18	9	21	34	23	43
Aggregatibacter aphrophilus (SP13)	233	574	607	522	447	321	99	86	412	119	185	87
Actinomyces sp._HMT_175 (SP130)	26	29	0	22	18	0	25	0	0	33	15	36
Gemella sanguinis (SP131)	2203	1936	1395	2198	2367	2280	1931	2050	3865	2613	2714	3046
Campylobacter sp._HMT_044 (SP132)	0	0	0	0	0	0	114	166	271	72	196	297
Streptococcus sp._HMT_061 (SP135)	0	7	3	11	10	10	14	12	32	25	13	13
Haemophilus haemolyticus (SP14)	194	112	253	131	240	512	0	0	0	0	0	0
Neisseria subflava (SP140)	3091	4092	2196	2550	2932	1792	7721	8598	10553	8901	7158	6715
Streptococcus oralis (SP143)	1023	1234	930	1042	1025	1028	633	600	883	810	720	579
Lautropia mirabilis (SP144)	0	28	19	0	44	0	92	64	130	81	174	146
Prevotella sp._HMT_306 (SP145)	0	0	0	0	0	1	0	0	3	5	0	0
Catonella morbi (SP148)	219	160	222	344	237	257	83	100	113	97	136	116
Prevotella jejuni (SP149)	71	118	131	83	59	78	85	78	147	36	53	79
Stomatobaculum longum (SP15)	204	564	361	564	377	144	348	413	510	376	432	291
Parvimonas sp._HMT_110 (SP151)	595	766	590	700	970	820	2898	2287	1839	3897	2740	2313
Streptococcus sp._HMT_057 (SP152)	90	46	0	61	74	45	6	7	8	0	0	0
Granulicatella elegans (SP153)	10	28	12	29	11	28	22	12	27	12	30	8
Streptococcus sp._HMT_423 (SP154)	1710	2120	1733	2027	2053	1845	3288	2750	4018	4187	3024	2254
Neisseria perflava (SP156)	881	683	582	777	892	684	734	549	1256	1838	557	820
Schaalia sp._HMT_172 (SP158)	39	75	44	48	0	65	147	73	176	156	151	132
Aggregatibacter paraphrophilus (SP160)	37	0	40	56	0	39	65	55	61	0	0	30
Selenomonas sp._HMT_136 (SP161)	0	0	8	7	0	11	0	4	0	0	5	0
Prevotella vespertina (SP164)	0	0	0	0	6	0	4	0	0	0	0	0
Alloprevotella tannerae (SP167)	0	34	19	46	22	54	0	8	18	10	0	16
Neisseria sicca (SP175)	0	53	51	0	116	0	120	119	371	158	198	183
Aggregatibacter segnis (SP178)	6636	4991	4225	5206	5737	11055	11981	11970	22822	15761	15762	18240
Streptococcus australis (SP179)	67	66	77	63	22	98	50	93	160	79	134	33
Eikenella corrodens (SP18)	60	63	38	39	90	55	129	78	83	132	112	106
Streptococcus anginosus (SP181)	0	0	0	0	37	6	35	0	0	35	73	0
Streptococcus oralis_subsp._tigurinus_clade_071 (SP183)	1062	1150	968	1348	1046	1027	1317	1154	974	1614	1053	652
Gemella morbillorum (SP19)	2684	2159	1845	2001	2298	1907	1950	1973	3326	2322	2461	2717
Fusobacterium sp._HMT_248 (SP191)	0	0	0	0	0	0	19	41	100	32	13	48
Rothia aeria (SP194)	13	17	12	14	10	4	27	21	20	32	30	20
Escherichia coli (SP195)	0	0	0	0	5570	0	0	470	0	1070	0	0
Neisseria flavescens (SP198)	8508	10175	7406	9192	14020	14840	2814	2414	4631	4632	2241	2367
Neisseria elongata (SP199)	45	0	33	31	18	78	2290	2114	4026	2750	2268	1921
Peptostreptococcaceae_[G-7] bacterium_HMT_922 (SP2)	441	364	380	500	446	479	63	130	101	86	91	61
Streptococcus oralis_subsp._tigurinus_clade_070 (SP20)	33	39	27	51	45	51	272	229	294	394	235	162
Streptococcus intermedius (SP200)	29	48	39	67	5	20	1	21	47	7	0	18
Neisseria cinerea (SP205)	0	0	0	0	6	30	31	39	7	14	12	5
Lancefieldella parvula (SP207)	151	124	108	80	90	100	85	105	130	155	153	182
Schaalia meyeri (SP208)	84	90	66	59	0	61	159	154	234	199	225	202
Streptococcus oralis_subsp._dentisani_clade_058 (SP21)	283	461	372	427	308	332	244	169	211	282	201	202
Ruminococcaceae_[G-2] bacterium_HMT_085 (SP212)	0	0	0	0	0	0	28	36	48	14	50	75
Klebsiella aerogenes (SP216)	1697	716	865	596	1665	2831	2348	2355	1636	4109	0	3893
Haemophilus sp._HMT_036 (SP218)	220	58	173	75	117	191	0	0	0	0	0	0
Streptococcus cristatus_clade_578 (SP22)	1348	1576	1372	1529	1519	1906	676	661	888	850	764	374
Alloscardovia omnicolens (SP229)	55	64	75	48	39	53	75	57	139	121	123	125
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP230)	0	0	0	31	0	48	52	66	64	53	0	49
Peptostreptococcus stomatis (SP241)	5344	3159	3342	3963	5723	5645	844	1747	2279	1327	2852	4154
Haemophilus sputorum (SP242)	215	232	248	178	157	210	9	35	59	29	28	45
Corynebacterium argentoratense (SP244)	14	7	0	0	78	33	0	0	0	33	0	0
Streptococcus periodonticum (SP247)	0	4	0	0	0	12	8	0	11	8	0	0
Peptoanaerobacter [Eubacterium] yurii (SP248)	0	0	61	69	14	77	94	107	80	178	81	0
Neisseria flava (SP249)	1212	887	1136	1781	3597	2014	7050	7062	16241	11192	10201	6433
Stomatobaculum sp._HMT_097 (SP25)	1569	1372	2081	2026	1539	2088	679	1140	663	966	881	941
Porphyromonas sp._HMT_278 (SP250)	188	285	234	276	76	386	0	0	9	0	0	0
Shigella dysenteriae (SP253)	0	0	0	0	0	0	0	861	0	2049	0	0
Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP257)	291	225	339	361	305	356	167	221	406	190	332	326
Solobacterium moorei (SP27)	399	385	353	421	389	492	372	351	515	344	482	476
Actinomyces sp._HMT_170 (SP272)	0	0	10	18	0	0	0	0	0	0	19	0
Parvimonas micra (SP277)	0	0	2	0	0	0	0	2	1	0	1	2
Streptococcus oralis_subsp._dentisani_clade_398 (SP281)	30	58	25	31	33	37	68	61	58	68	56	36
Prevotella shahii (SP286)	0	13	0	17	23	0	78	60	113	63	72	159
Shigella sonnei (SP288)	0	0	0	0	1026	0	0	419	0	1009	0	0
Leptotrichia sp._HMT_215 (SP29)	425	443	385	563	462	865	187	447	477	344	486	562
Peptostreptococcaceae_[G-1] [Eubacterium]_sulci (SP292)	107	99	134	139	105	128	245	347	385	188	388	290
Neisseria oralis (SP296)	15	18	0	26	27	0	0	0	0	0	0	0
Schaalia lingnae (SP3)	0	0	0	0	0	0	37	43	0	0	53	43
Haemophilus parainfluenzae (SP30)	4810	3631	3481	3692	3966	4798	2026	1525	3072	2140	2547	2161
Raoultella planticola (SP303)	260	0	0	80	292	417	0	0	0	0	0	0
Streptococcus vestibularis (SP305)	0	20	30	34	0	0	60	58	139	113	88	83
Fusobacterium sp._HMT_204 (SP309)	472	278	279	362	299	511	45	35	64	26	48	49
Prevotella nanceiensis (SP31)	23	18	0	27	18	26	0	35	41	27	48	35
Porphyromonas sp._HMT_277 (SP318)	172	229	200	205	172	339	0	0	0	0	0	0
Veillonella rogosae (SP32)	579	520	489	676	613	867	437	458	803	561	608	622
Streptococcus cristatus (SP33)	169	233	231	266	188	338	0	0	50	49	0	0
Streptococcus mitis (SP34)	429	553	452	512	309	394	301	233	382	383	313	287
Streptococcus gordonii (SP37)	1630	1814	1227	1526	1097	1258	1517	1355	1876	2014	1841	1721
Porphyromonas catoniae (SP38)	408	360	340	338	362	601	260	159	288	174	271	71
Streptococcus parasanguinis_clade_411 (SP39)	171	192	101	134	125	131	306	282	426	337	283	278
Saccharibacteria_(TM7)_[G-1] bacterium_HMT_352 (SP4)	27	48	25	38	30	36	24	26	32	40	0	0
Streptococcus sp._HMT_066 (SP49)	82	74	42	52	66	44	74	71	103	96	91	74
Porphyromonas pasteri (SP5)	6064	4476	4739	4945	4645	7949	3037	3229	5960	4555	4462	4197
Streptococcus chosunense (SP50)	334	368	324	370	368	349	266	235	386	392	269	281
Streptococcus infantis_clade_431 (SP52)	154	188	148	134	163	142	149	156	225	189	188	131
Aggregatibacter sp._HMT_513 (SP58)	1247	618	918	696	788	1605	4167	5989	6564	5829	5948	7408
Actinomyces oris (SP60)	0	25	17	0	10	0	24	18	18	16	25	14
Abiotrophia defectiva (SP61)	89	90	89	86	107	58	46	57	74	73	54	45
Alloprevotella sp._HMT_473 (SP62)	35	63	46	41	0	77	0	0	0	0	0	0
Aggregatibacter sp._HMT_512 (SP63)	1034	679	701	816	1002	1465	800	854	1359	1143	1215	1419
Gemella haemolysans (SP66)	305	255	283	433	389	401	243	254	443	349	299	324
Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP69)	0	0	0	17	15	0	7	12	0	7	0	5
Fusobacterium periodonticum (SP7)	11495	11081	11249	13012	9895	18413	6970	8984	12110	7851	11720	10150
Veillonella tobetsuensis (SP71)	79	53	54	80	64	103	24	20	33	28	22	44
Rothia mucilaginosa (SP77)	1466	1068	1191	2332	3696	1937	4074	3251	5364	4658	6131	6147
Neisseria mucosa (SP78)	703	414	572	452	492	516	277	275	655	428	264	251
Granulicatella adiacens (SP8)	1340	1482	1354	1348	1572	1446	1106	1025	1506	1502	1088	850
Streptococcus salivarius (SP80)	5053	5918	5392	5570	5585	6693	5569	6032	11481	9030	7664	6757
Campylobacter showae (SP81)	159	119	156	180	147	269	93	88	109	199	97	93
Veillonella sp._HMT_780 (SP82)	22	20	29	68	0	54	0	0	6	0	0	0
Prevotella histicola (SP83)	73	105	81	97	79	150	78	67	121	82	113	96
Schaalia odontolytica (SP84)	225	267	191	305	278	175	285	219	347	369	294	224
Veillonella atypica (SP86)	3415	2895	2871	3332	3193	4758	2537	3357	4632	3370	3725	3956
Mogibacterium diversum (SP87)	48	13	23	29	37	78	56	37	93	28	126	78
Rothia dentocariosa (SP88)	214	128	218	184	115	102	174	79	152	204	159	110
Streptococcus sp._HMT_074 (SP89)	0	0	0	0	0	0	21	14	31	48	11	10
Streptococcus sp._HMT_064 (SP90)	18	60	77	16	58	74	190	115	142	200	134	138
Megasphaera micronuciformis (SP91)	205	266	201	270	196	359	637	899	964	494	1106	1112
Alloprevotella sp._HMT_308 (SP92)	0	0	0	0	21	0	0	16	0	41	27	30
Streptococcus sanguinis (SP94)	1649	1977	1904	1973	2481	2376	1071	1000	1387	1083	948	1020
Streptococcus downii (SP96)	19	20	17	17	27	0	9	0	28	14	17	13
Lachnoanaerobaculum gingivalis (SP98)	0	32	119	69	60	46	100	97	89	59	84	111
Actinomyces sp._HMT_175_nov_97.746% (SPN135)	15	34	0	9	15	0	17	16	0	2	0	0
Porphyromonas sp._HMT_284_nov_96.516% (SPN142)	126	196	198	246	158	295	0	0	0	0	0	0
Parvimonas sp._HMT_110_nov_97.684% (SPN40)	27	40	31	59	31	18	0	95	89	105	92	103
Campylobacter concisus_nov_97.831% (SPN65)	598	919	830	1030	560	1448	109	35	22	46	42	12
Streptococcus sanguinis_nov_97.782% (SPN77)	341	470	382	467	503	474	202	215	295	276	212	214
Streptococcus parasanguinis_clade_411_nov_97.976% (SPN88)	0	0	0	0	0	0	0	0	19	18	10	9
Prevotella sp._HMT_305_nov_93.865% (SPN99)	76	43	42	37	37	182	64	127	164	93	164	194
Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP1)	93	57	112	80	56	81	0	0	0	0	0	0
Haemophilus seminalis_sp._HMT_908 (SPP14)	152	62	130	79	118	305	0	0	0	0	0	0
Streptococcus infantis_infantis_clade_638 (SPP17)	88	50	96	96	108	100	139	175	222	216	119	112
Streptococcus infantis_infantis_clade_431_infantis_clade_638 (SPP18)	0	0	0	0	0	0	49	0	57	81	0	62
Veillonella dispar_parvula (SPP2)	2770	3077	2690	3175	2719	3550	3500	3496	4053	4572	3573	3522
Escherichia_Shigella fergusonii_flexneri (SPP23)	0	0	0	0	0	0	0	1264	0	3024	0	0
Streptococcus parasanguinis_parasanguinis_clade_721 (SPP24)	2329	2528	2158	2408	2310	2997	2052	2155	3291	2972	2728	2574
Staphylococcus argenteus_aureus_roterodami (SPP26)	11	54	75	24	45	60	59	17	363	100	81	211
Lachnoanaerobaculum gingivalis_umeaense (SPP27)	0	12	5	0	0	0	0	0	0	0	6	0
Veillonella denticariosi_dispar_parvula (SPP3)	125	158	187	187	125	179	214	239	339	250	227	242
Streptococcus multispecies_sppn1_2_nov_97.976% (SPPN1)	0	0	0	0	0	0	12	14	37	25	24	19
Parvimonas multispecies_sppn9_2_nov_96.842% (SPPN9)	2122	1719	1773	2167	1739	2468	2002	2168	3006	1668	3200	2640
