GroupCF...1 GroupCF...2 GroupCF...3 GroupCF...4 GroupCF...5 GroupCF...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance StreptococcusStreptococcus sp._str._C300 (SP1) -1.31391857343658 0.764941556086033 -1.71767184431644 0.0858564877379357 1 FALSE PorphyromonasPorphyromonas sp._HMT_930 (SP10) -0.999578957322068 0.77975353801527 -1.28191653976502 0.199871925223832 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP100) 0.588527520886119 0.689509312096372 0.853545427975106 0.39335690674395 1 FALSE HaemophilusHaemophilus sp._HMT_908 (SP101) -1.2594590553322 0.711084382211675 -1.77118087084816 0.0765306292208676 1 FALSE LachnoanaerobaculumLachnoanaerobaculum umeaense (SP104) 0.967172079231795 0.733454573958168 1.31865300670544 0.187285144053064 1 FALSE MoraxellaMoraxella sp._Oral_Taxon_B07 (SP105) -0.388730643313649 0.582742508806458 -0.667071026120657 0.504726766276805 1 FALSE PrevotellaPrevotella histicola (SP106) -0.976894656506123 0.621391935912125 -1.57210707131589 0.115925721837092 1 FALSE GemellaGemella moribillum (SP108) 0.105647939778485 0.791480467000166 0.133481423968563 0.893812654328033 1 FALSE HaemophilusHaemophilus haemolyticus (SP109) -0.243936923472576 0.843444289765633 -0.289215217214119 0.772416687566138 1 FALSE PorphyromonasPorphyromonas catoniae (SP11) 1.56472316812309 0.700596627445383 2.23341521615457 0.0255215756754992 1 FALSE LeptotrichiaLeptotrichia sp._HMT_219 (SP110) 1.43596140448743 0.630480572688879 2.27756645754101 0.0227524208679606 1 FALSE AlloprevotellaAlloprevotella sp._HMT_308 (SP112) -0.732680119680684 0.678811992518169 -1.07935647536615 0.280428845785981 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP114) 0.596812357533417 0.60224704831663 0.990975977718107 0.321697310410977 1 FALSE PrevotellaPrevotella pallens (SP116) -1.017779292612 0.554030292063542 -1.83704629005244 0.0662030620802352 1 FALSE AlloprevotellaAlloprevotella sp._HMT_912 (SP117) 0.51836406426433 0.659984840985987 0.785418137013447 0.43220845024246 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP118) -0.813103411772948 0.585497611574888 -1.3887390754436 0.164912107365863 1 FALSE HaemophilusHaemophilus parahaemolyticus (SP12) 0.159187333079528 0.751255508376106 0.211895062737873 0.832188902506055 1 FALSE Ruminococcaceae_[G-1]Ruminococcaceae_[G-1] bacterium_HMT_075 (SP121) -0.590330306170903 0.632767015284246 -0.932934700943159 0.350853684341474 1 FALSE StreptococcusStreptococcus salivarius (SP122) -1.42271727442151 0.617121296844401 -2.30540945790796 0.0211436523038779 1 FALSE HaemophilusHaemophilus paraphrohaemolyticus (SP13) -0.0987725295098018 0.861608823318795 -0.114637323616701 0.908732594747474 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP130) 1.06501455047142 0.786059854319621 1.35487716949144 0.175456694673896 1 FALSE NeisseriaNeisseria cinerea (SP131) 0.408856364950431 0.817959819072183 0.499848960079969 0.617181433305114 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP132) -0.902770625448723 0.487543546169617 -1.85167177894433 0.0640729688490482 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP137) -0.794120902152329 0.530180413043928 -1.49783146003648 0.134177044849614 1 FALSE StreptococcusStreptococcus oralis_subsp._dentisani_clade_058 (SP138) 0.170537701375775 0.577548590879867 0.295278534254528 0.767781113041334 1 FALSE SelenomonasSelenomonas sputigena (SP139) -1.66263565623803 0.464421409104409 -3.58001509759048 0.000343574356140934 0.0443210919421804 TRUE LautropiaLautropia mirabilis (SP14) -0.69805954147947 0.833541385790757 -0.837462366451356 0.40233272223847 1 FALSE ActinomycesActinomyces naeslundii (SP142) 0.471513263321372 0.617460763981034 0.763632753409827 0.445086124965488 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP144) -0.0248665384974375 0.757304307706317 -0.0328355962647987 0.973805691794196 1 FALSE PorphyromonasPorphyromonas sp._HMT_278 (SP145) -0.535461883983725 0.667319578794906 -0.80240697410782 0.42231758018458 1 FALSE CardiobacteriumCardiobacterium valvarum (SP147) 1.69895604225543 0.681587595457219 2.49264519128425 0.0126795478896595 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP148) 0.371397769611114 0.612885985832712 0.605981827283104 0.544526820734876 1 FALSE LeptotrichiaLeptotrichia hofstadii (SP15) 0.0413709352235154 0.850075676041971 0.0486673556125523 0.961184391482001 1 FALSE PrevotellaPrevotella salivae (SP150) -1.41573734719047 0.484202152214759 -2.92385595709319 0.00345724688978396 0.439070355002563 FALSE CorynebacteriumCorynebacterium matruchotii (SP152) 0.277379234031384 0.616297796002794 0.450073383079447 0.652657528292079 1 FALSE HaemophilusHaemophilus sp._HMT_036 (SP155) 0.668186733897212 0.79689028503229 0.838492759226118 0.401754012648784 1 FALSE StreptococcusStreptococcus mutans (SP16) -1.1448398037244 0.75021933926783 -1.52600678735061 0.127008174160881 1 FALSE LeptotrichiaLeptotrichia trevisanii (SP166) 1.48578424767515 0.655573011529561 2.2663901984137 0.0234275031839803 1 FALSE ActinomycesActinomyces johnsonii (SP17) 2.16809777005554 0.672679730630312 3.22307581354354 0.00126821982496374 0.162332137595359 FALSE PrevotellaPrevotella oulorum (SP173) -1.13345855328681 0.611706698248752 -1.85294448553821 0.0638903160293116 1 FALSE PrevotellaPrevotella veroralis (SP175) -0.808666659166624 0.486946867944198 -1.66068766923313 0.0967761911724889 1 FALSE AlloprevotellaAlloprevotella sp._HMT_913 (SP180) -0.0553045017389083 0.663296694132725 -0.0833782261062226 0.933550801267879 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP181) -0.0395395037061453 0.746115143258504 -0.0529938362240774 0.95773681879506 1 FALSE AggregatibacterAggregatibacter sp._HMT_949 (SP183) -0.0871145444912844 0.569139760531917 -0.153063536467506 0.878348170665431 1 FALSE LeptotrichiaLeptotrichia sp._HMT_417 (SP184) -1.2140874368851 0.438956651685967 -2.76584813607899 0 0 TRUE ArachniaArachnia propionica (SP185) 1.53543407156769 0.632605696684339 2.42715814861503 0.0152176206637566 1 FALSE GranulicatellaGranulicatella elegans (SP19) -0.231408421598432 0.707639129369116 -0.327014733914926 0.74365674129738 1 FALSE NeisseriaNeisseria subflava (SP195) 0.129855096304473 0.63607673299566 0.204150049150374 0.838236244238771 1 FALSE HaemophilusHaemophilus parainfluenzae (SP2) -0.31589443368351 0.606912715429855 -0.520494011168925 0.602719300942222 1 FALSE AbiotrophiaAbiotrophia defectiva (SP20) -1.1575445639577 0.698747453513987 -1.65659933089764 0.0976005077303331 1 FALSE BergeyellaBergeyella sp._HMT_206 (SP204) 0.305387019565061 0.758380278991726 0.402683229014177 0.687181273095002 1 FALSE StreptococcusStreptococcus sanguinis (SP21) 0.151436182228989 0.507816269898329 0.298210575764554 0.765542450524729 1 FALSE PorphyromonasPorphyromonas sp._Oral_Taxon_B43 (SP215) -0.467618731662155 0.59127821439341 -0.790860749269924 0.42902525518105 1 FALSE StreptococcusStreptococcus infantis (SP22) 0.491818483192906 0.804009576322285 0.611707245382065 0.54073146733024 1 FALSE LeptotrichiaLeptotrichia sp._HMT_212 (SP23) 0.605512459619629 0.717373131860694 0.844069052389898 0.398630820087257 1 FALSE AggregatibacterAggregatibacter sp._HMT_898 (SP24) -0.0233253886048516 0.594988312088157 -0.039203103877771 0.968728459003937 1 FALSE KingellaKingella oralis (SP25) 1.12798092597078 0.68073356260947 1.65700795131485 0.0975178675376223 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP26) -1.30001964183201 0.50326207467927 -2.58318619113215 0.00978924769627305 1 FALSE LeptotrichiaLeptotrichia shahii (SP27) -1.25005182379091 0.807348360648003 -1.54834255535935 0.121539843812726 1 FALSE FusobacteriumFusobacterium nucleatum (SP29) 1.38910143675427 0.880041248215479 1.57845037328767 0.114462180527508 1 FALSE StreptococcusStreptococcus mitis (SP3) 0.231445001508667 0.298034797095699 0.776570399711919 0.437412270941915 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP30) -0.72772034443414 0.656696104549926 -1.10815389248105 0.267795359534281 1 FALSE GranulicatellaGranulicatella paradiacens (SP33) -0.841527311310705 0.793932650554588 -1.05994798264421 0.289168264717845 1 FALSE NeisseriaNeisseria flavescens|subflava (SP35) -0.267820902183146 0.803006102127281 -0.333522872956568 0.738739626733902 1 FALSE AlloprevotellaAlloprevotella sp._HMT_473 (SP36) -0.648546072451724 0.892050518814728 -0.727028412374504 0.467208550726888 1 FALSE VeillonellaVeillonella parvula (SP37) -0.282405541989471 0.308228567088203 -0.916221181759112 0.35955089792745 1 FALSE StreptococcusStreptococcus cristatus (SP38) 0.141030608624941 0.435890407599639 0.323546024794554 0.746281757451034 1 FALSE LeptotrichiaLeptotrichia sp._HMT_225 (SP39) 0.94083921379969 0.586872378417794 1.6031410718906 0.108903511990141 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP4) -0.697285560045801 0.546913244792958 -1.27494729133826 0.202327898769892 1 FALSE StreptococcusStreptococcus oralis (SP40) -0.884089169125944 0.639017325562843 -1.38351361341767 0.16650743606216 1 FALSE VeillonellaVeillonella sp._HMT_780 (SP41) -0.437673075138463 0.889934918216537 -0.491803463578636 0.622858287788628 1 FALSE GemellaGemella haemolysans (SP42) 0.29617656545208 0.572997273785267 0.516890008037059 0.605232943099594 1 FALSE RothiaRothia dentocariosa (SP44) 0.284771027814195 0.825201299629695 0.345092800922617 0.730024605433832 1 FALSE RothiaRothia mucilaginosa (SP45) 0.173707416824219 0.824155756726444 0.210770131017693 0.833066646948428 1 FALSE NeisseriaNeisseria sicca (SP47) -0.40688004418295 0.788741410100173 -0.515859873683156 0.605952281275068 1 FALSE CardiobacteriumCardiobacterium hominis (SP48) 1.81800367134334 0.702656967823426 2.5873274650287 0.00967236217569998 1 FALSE PorphyromonasPorphyromonas pasteri (SP49) -0.578616743020076 0.657136027801019 -0.88051289008808 0.378581525365626 1 FALSE VeillonellaVeillonella atypica (SP5) -2.38881612287247 0.648689314504645 -3.68252732002628 0.000230933110434692 0.03002130435651 TRUE AlloprevotellaAlloprevotella sp._HMT_914 (SP51) -1.16221204917985 0.750356705518107 -1.54887940713126 0.12141071212678 1 FALSE NeisseriaNeisseria elongata (SP53) -0.129241516770012 0.702666986095142 -0.183929968715667 0.854068394233708 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP54) 1.03863635386304 0.629963266759859 1.64872526489543 0.0992039317568489 1 FALSE LeptotrichiaLeptotrichia wadei (SP55) -0.738191744279501 0.807642327561573 -0.91400824237165 0.360712514715436 1 FALSE LeptotrichiaLeptotrichia sp._HMT_498 (SP57) -0.273459166178084 0.8022790337541 -0.340852938532481 0.733214295025327 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP58) 1.38576684348701 0.897476488232162 1.54407035912069 0.122571288612334 1 FALSE AggregatibacterAggregatibacter sp._HMT_513 (SP6) -1.76399532853693 0.633969200758958 -2.78246218653076 0.00539481515118581 0.679746709049412 FALSE NeisseriaNeisseria mucosa (SP60) 1.11054368268061 0.866519847567057 1.28161367082209 0.199978202122277 1 FALSE RothiaRothia aeria (SP61) -0.0358599286262091 0.817614660056658 -0.0438592045594242 0.965016634033368 1 FALSE CorynebacteriumCorynebacterium durum (SP62) -0.247513505207554 0.668843428796634 -0.370061952545267 0.711336330294752 1 FALSE GemellaGemella morbillorum (SP63) -1.22706229208902 0.771002253741186 -1.59151583038164 0.111493535672625 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP64) 1.71107228453081 0.708863240945326 2.41382566579269 0.0157860134761281 1 FALSE KingellaKingella denitrificans (SP66) -0.0470471159693905 0.814542553060732 -0.0577589418657207 0.953940643194192 1 FALSE CapnocytophagaCapnocytophaga granulosa (SP67) -0.237384834525785 0.706970252423197 -0.335777684721712 0.737038519165564 1 FALSE Saccharibacteria_(TM7)_[G-6]Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP68) -0.767216189194062 0.788880401056946 -0.972538027521208 0.330782956181672 1 FALSE PrevotellaPrevotella melaninogenica (SP7) -1.50586334356318 0.746996392115942 -2.01589105309823 0.0438113693821628 1 FALSE StreptococcusStreptococcus sp._HMT_056 (SP70) 0.460310389444537 0.849081736447227 0.542127300217988 0.587730813033555 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP72) -0.584932380017104 0.660986495018771 -0.884938473668048 0.37618981605107 1 FALSE NeisseriaNeisseria sp._HMT_018 (SP73) 0.844360833011429 0.645779767151954 1.30750586494102 0.191040964347841 1 FALSE HaemophilusHaemophilus sputorum (SP74) -0.168877488990215 0.579298876356781 -0.291520484300415 0.770653279668089 1 FALSE ActinomycesActinomyces odontolyticus (SP75) -0.0353537228419714 0.587871054033114 -0.0601385671218641 0.952045273413763 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP76) 2.4316045148177 0.893031128733538 2.72286646745014 0.00647182106736423 0.802505812353164 FALSE StreptococcusStreptococcus intermedius (SP77) -0.0577962269045515 0.618566678807881 -0.0934357263083392 0.925557409160405 1 FALSE PrevotellaPrevotella loescheii (SP78) 0.223312248496896 0.696701438044301 0.320527899474059 0.748568184339997 1 FALSE NeisseriaNeisseria sp._Oral_Taxon_14 (SP79) 0.456472734926764 0.730085187420069 0.625232154811715 0.531818700856576 1 FALSE StreptococcusStreptococcus gordonii (SP8) -0.464740539918457 0.731184316330489 -0.635599710686899 0.525037358113043 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP80) -0.607538211873969 0.666234628792283 -0.911898279702579 0.361822267243742 1 FALSE LeptotrichiaLeptotrichia buccalis (SP81) 1.0832674700205 0.827135561565747 1.30966134253725 0.190310426630825 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP82) 0.557880084497379 0.658984655505702 0.846575227262711 0.397231926753273 1 FALSE GranulicatellaGranulicatella adiacens (SP84) -1.85554892961811 0.849941124778762 -2.18314995653505 0.0290247686790859 1 FALSE AggregatibacterAggregatibacter aphrophilus (SP85) 0.114302988927669 0.657058684549149 0.173961613498952 0.861895630172943 1 FALSE PrevotellaPrevotella oris (SP86) -0.276344185873227 0.651992620290534 -0.423845573206158 0.671678439395563 1 FALSE EikenellaEikenella corrodens (SP89) 0.903162409663489 0.76134184101302 1.1862771241651 0.23551287752474 1 FALSE PorphyromonasPorphyromonas sp._Oral_Taxon_C34 (SP9) 0.0829028625958033 0.729576637928825 0.113631465545764 0.909529942997038 1 FALSE LeptotrichiaLeptotrichia sp._HMT_221 (SP90) -1.43819133641525 0.574388595682135 -2.50386471323874 0.0122844996807302 1 FALSE PrevotellaPrevotella sp._HMT_306 (SP93) -1.22024663511828 0.470051039872964 -2.5959875239252 0.00943194899502874 1 FALSE LeptotrichiaLeptotrichia sp._HMT_392 (SP94) 0.945542791336519 0.668168921817424 1.41512536794533 0.157031741543018 1 FALSE AggregatibacterAggregatibacter segnis (SP95) 0.278725472698827 0.75770550205023 0.367854624183988 0.712981636089888 1 FALSE FusobacteriumFusobacterium periodonticum (SP96) 0.641989143825575 0.863136266023395 0.743786548076957 0.457005619570743 1 FALSE TannerellaTannerella sp._HMT_286 (SP97) 0.608279448945266 0.660924983590611 0.920345673181642 0.357392148618551 1 FALSE StreptococcusStreptococcus chosunense (SP98) 0.718030220741855 0.762433928233348 0.94176058298667 0.34631523000964 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP99) -0.568099117567433 0.666518159769583 -0.852338543579707 0.394026219235353 1 FALSE CardiobacteriumCardiobacterium hominis_nov_97.313% (SPN100) 1.08286703404554 0.567830447833163 1.90702530689883 0.0565173104639494 1 FALSE PorphyromonasPorphyromonas catoniae_nov_97.909% (SPN53) -0.183607006130856 0.731864015321987 -0.250875848910371 0.801910097172141 1 FALSE StreptobacillusStreptobacillus notomytis_nov_93.922% (SPN65) 0.103982507909428 0.767399767153682 0.135499790800176 0.892216729649285 1 FALSE AlloprevotellaAlloprevotella sp._HMT_473_nov_97.436% (SPN76) -0.79883407837765 0.65001563916543 -1.22894593644438 0.219092076824395 1 FALSE StreptococcusStreptococcus pneumoniae_sp._str._M334 (SPP14) -0.775150964450688 0.995373645387308 -0.778753755479502 0.436124783690698 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP15) -0.553546229593375 0.824643058778022 -0.671255549538771 0.502057746419325 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP19) -0.379941084068445 0.795804146960074 -0.477430389775924 0.63305567834512 1 FALSE PorphyromonasPorphyromonas sp._HMT_930_sp._Oral_Taxon_C34 (SPP2) -0.264692527998171 0.803430011337128 -0.329453125055224 0.74181321883516 1 FALSE StreptococcusStreptococcus pneumoniae_sp._str._C300_sp._str._M334 (SPP8) -0.260008132812098 0.905766623173071 -0.287058637578453 0.774067422312827 1 FALSE PseudoleptotrichiaPseudoleptotrichia goodfellowii (SPPN1) -0.0400027900077526 0.758699825756287 -0.0527254503688294 0.957950660763473 1 FALSE