GroupCF...1 GroupCF...2 GroupCF...3 GroupCF...4 GroupCF...5 GroupCF...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance StreptococcusStreptococcus sp._str._C300 (SP1) -1.37397409845017 0.757450593238027 -1.81394550445405 0.0696861160885976 1 FALSE PorphyromonasPorphyromonas sp._HMT_930 (SP10) -0.91618854007469 0.772494624193237 -1.18601283605245 0.235617230436353 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP100) 0.419187622779701 0.704129300070588 0.59532762340337 0.551624494696341 1 FALSE HaemophilusHaemophilus sp._HMT_908 (SP101) -1.19444256004162 0.702502960577958 -1.70026694130788 0.0890807257414384 1 FALSE LachnoanaerobaculumLachnoanaerobaculum umeaense (SP104) 0.977494810229583 0.726484399128583 1.34551383539975 0.178459356407643 1 FALSE MoraxellaMoraxella sp._Oral_Taxon_B07 (SP105) -0.378485168282865 0.572576645706856 -0.66102096744728 0.508598867153313 1 FALSE PrevotellaPrevotella histicola (SP106) -0.938249632203471 0.609029592981258 -1.54056492987582 0.123422708790772 1 FALSE GemellaGemella moribillum (SP108) 0.149582207005037 0.780690558736134 0.191602428556581 0.848053640047941 1 FALSE HaemophilusHaemophilus haemolyticus (SP109) -0.144313456369502 0.834898823397249 -0.172851431006075 0.862768209330849 1 FALSE PorphyromonasPorphyromonas catoniae (SP11) 1.62696885013215 0.692094974763628 2.3507884169912 0.0187336829427599 1 FALSE LeptotrichiaLeptotrichia sp._HMT_219 (SP110) 1.42450559933493 0.628722375487515 2.26571481288599 0.0234688500003713 1 FALSE AlloprevotellaAlloprevotella sp._HMT_308 (SP112) -0.69026473575314 0.667273944304218 -1.03445480172749 0.3009235962723 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP114) 0.615424710650034 0.594545465715846 1.03511799540688 0.30061380948541 1 FALSE PrevotellaPrevotella pallens (SP116) -0.985456458061216 0.54140815162712 -1.82017292332887 0.0687326751386671 1 FALSE AlloprevotellaAlloprevotella sp._HMT_912 (SP117) 0.532760435152729 0.652424925703086 0.816585041686749 0.414165606233 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP118) -0.970198456247036 0.601170000848878 -1.61385041648298 0.106559875825978 1 FALSE HaemophilusHaemophilus parahaemolyticus (SP12) 0.185423423380793 0.74032101857242 0.250463540449453 0.802228896791703 1 FALSE Ruminococcaceae_[G-1]Ruminococcaceae_[G-1] bacterium_HMT_075 (SP121) -0.710176228577571 0.637492410552601 -1.11401518954863 0.265272670332516 1 FALSE StreptococcusStreptococcus salivarius (SP122) -1.3730186999256 0.603837599204971 -2.27382114285919 0.0229767424986316 1 FALSE HaemophilusHaemophilus paraphrohaemolyticus (SP13) -0.0396669454949641 0.852801760983691 -0.0465136768118407 0.962900833365766 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP130) 1.0925506229374 0.778925656123229 1.40263786967181 0.160724853105837 1 FALSE NeisseriaNeisseria cinerea (SP131) 0.451048705052929 0.809823856855798 0.556971372520636 0.577546988652976 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP132) -0.885535856464239 0.476267495860889 -1.85932456898737 0.0629811465169668 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP137) -0.770712308437235 0.521049210310912 -1.47915454660674 0.139099014519718 1 FALSE StreptococcusStreptococcus oralis_subsp._dentisani_clade_058 (SP138) 0.174936337425213 0.570866171960326 0.306440188642621 0.759269513056504 1 FALSE SelenomonasSelenomonas sputigena (SP139) -1.80030230868673 0.476303440222213 -3.77973820186314 0.000156993340126045 0.0202521408762598 TRUE LautropiaLautropia mirabilis (SP14) -0.748310373375428 0.825752813027047 -0.906215954181579 0.364821560154582 1 FALSE ActinomycesActinomyces naeslundii (SP142) 0.463432824814723 0.613796928758234 0.755026301210547 0.450233201306644 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP144) 0.054030955135229 0.748847269322051 0.0721521695393836 0.942480809087372 1 FALSE PorphyromonasPorphyromonas sp._HMT_278 (SP145) -0.509212037032531 0.656709001450506 -0.775399813171145 0.43810344549483 1 FALSE CardiobacteriumCardiobacterium valvarum (SP147) 1.68375270731672 0.680301987550021 2.4750077732103 0.0133233276001673 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP148) 0.365624458099404 0.60721432459153 0.602134111946977 0.547084869567706 1 FALSE LeptotrichiaLeptotrichia hofstadii (SP15) 0.0955650273307433 0.841756140410124 0.113530537816073 0.909609953910053 1 FALSE PrevotellaPrevotella salivae (SP150) -1.38127656123763 0.470238863287987 -2.93739345910186 0.00330983877335764 0.420349524216421 FALSE CorynebacteriumCorynebacterium matruchotii (SP152) 0.277762778628978 0.611617596529116 0.454144518086565 0.649724813106469 1 FALSE HaemophilusHaemophilus sp._HMT_036 (SP155) 0.721181509510798 0.788172577653054 0.91500456874339 0.360189231654026 1 FALSE StreptococcusStreptococcus mutans (SP16) -1.29868111230792 0.756567416301889 -1.71654380604426 0.086062557439719 1 FALSE LeptotrichiaLeptotrichia trevisanii (SP166) 1.48836212966163 0.650802541774477 2.28696422359301 0.0221979114015495 1 FALSE ActinomycesActinomyces johnsonii (SP17) 2.15306124088109 0.671269310160068 3.20744775352188 0.0013391838316306 0.171415530448716 FALSE PrevotellaPrevotella oulorum (SP173) -1.09084609247033 0.600130840266857 -1.81768044445986 0.069112988340348 1 FALSE PrevotellaPrevotella veroralis (SP175) -0.795294825557904 0.47486697840782 -1.67477390873639 0.0939785999164491 1 FALSE AlloprevotellaAlloprevotella sp._HMT_913 (SP180) -0.00875284979982424 0.655180366947321 -0.0133594506816594 0.989341017621415 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP181) -0.0124082523385451 0.73454336875613 -0.0168924707053814 0.986522399418135 1 FALSE AggregatibacterAggregatibacter sp._HMT_949 (SP183) -0.0841956111697072 0.56254591896487 -0.14966886849812 0.881025870809541 1 FALSE LeptotrichiaLeptotrichia sp._HMT_417 (SP184) -1.19508621727045 0.424087427133879 -2.8180185046919 0 0 TRUE ArachniaArachnia propionica (SP185) 1.60639056823455 0.626366670214165 2.56461693225998 0.0103289769218108 1 FALSE GranulicatellaGranulicatella elegans (SP19) -0.313618444560891 0.706740803023633 -0.443753131585362 0.65722107718276 1 FALSE NeisseriaNeisseria subflava (SP195) 0.134481121822199 0.629331434877245 0.213688867851374 0.830789693005825 1 FALSE HaemophilusHaemophilus parainfluenzae (SP2) -0.113757235619027 0.627363515820882 -0.181325870488627 0.856111800882477 1 FALSE AbiotrophiaAbiotrophia defectiva (SP20) -1.18374500815051 0.691280582253719 -1.71239441485721 0.0868240076404177 1 FALSE BergeyellaBergeyella sp._HMT_206 (SP204) 0.346398910518516 0.751112997498955 0.46118082322094 0.64466887886858 1 FALSE StreptococcusStreptococcus sanguinis (SP21) 0.0865782394477899 0.499301216228304 0.173398815452118 0.862337956134955 1 FALSE PorphyromonasPorphyromonas sp._Oral_Taxon_B43 (SP215) -0.453667502609435 0.583131076289225 -0.777985466829112 0.436577580971363 1 FALSE StreptococcusStreptococcus infantis (SP22) 0.526973377790619 0.792877030692918 0.664634435594738 0.506284338460931 1 FALSE LeptotrichiaLeptotrichia sp._HMT_212 (SP23) 0.706883397737645 0.711938716808806 0.99289922158775 0.320759069173348 1 FALSE AggregatibacterAggregatibacter sp._HMT_898 (SP24) -0.0153172402497898 0.587328401403383 -0.0260795156733274 0.979193915630082 1 FALSE KingellaKingella oralis (SP25) 1.19584269332962 0.670354225704597 1.78389670337752 0.0744404517009467 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP26) -1.27002589843533 0.488254925374908 -2.60115327553559 0.00929109316669591 1 FALSE LeptotrichiaLeptotrichia shahii (SP27) -1.16893287447057 0.79975448085138 -1.46161466107221 0.143846834503912 1 FALSE FusobacteriumFusobacterium nucleatum (SP29) 1.42130867356775 0.869503821126769 1.63462038812654 0.102128650943804 1 FALSE StreptococcusStreptococcus mitis (SP3) 0.204820852559526 0.295871887675927 0.69226195894579 0.488772835039759 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP30) -0.681561282545557 0.644454466046812 -1.05757864745102 0.290247581469523 1 FALSE GranulicatellaGranulicatella paradiacens (SP33) -0.762860395969114 0.783861245955398 -0.97320845992241 0.330449707050698 1 FALSE NeisseriaNeisseria flavescens|subflava (SP35) -0.157132273132269 0.798450041929855 -0.196796624560856 0.843986692675328 1 FALSE AlloprevotellaAlloprevotella sp._HMT_473 (SP36) -0.505407799606444 0.891475303413852 -0.566934156976659 0.570758916619877 1 FALSE VeillonellaVeillonella parvula (SP37) -0.320678806072396 0.307434956398687 -1.04307854197469 0.296911917954244 1 FALSE StreptococcusStreptococcus cristatus (SP38) 0.088870319533049 0.433471981247626 0.205019755319043 0.83755669034556 1 FALSE LeptotrichiaLeptotrichia sp._HMT_225 (SP39) 0.739911543100387 0.620878835024691 1.19171648534446 0.233372431820796 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP4) -0.891499455578607 0.574499452403239 -1.55178469161162 0.120713750048903 1 FALSE StreptococcusStreptococcus oralis (SP40) -0.927596779590831 0.634616072476421 -1.46166606838546 0.143832739888864 1 FALSE VeillonellaVeillonella sp._HMT_780 (SP41) -0.545744351170866 0.88822116736518 -0.614423942169452 0.538935218566463 1 FALSE GemellaGemella haemolysans (SP42) 0.239192966260675 0.565536443601409 0.422948810756498 0.672332609246186 1 FALSE RothiaRothia dentocariosa (SP44) 0.363767757252019 0.818116176566465 0.444640709561212 0.656579422971728 1 FALSE RothiaRothia mucilaginosa (SP45) 0.216555007762517 0.812983552521823 0.266370712040578 0.789953719048831 1 FALSE NeisseriaNeisseria sicca (SP47) -0.246345330157145 0.794130949581762 -0.310207441589936 0.756403211910044 1 FALSE CardiobacteriumCardiobacterium hominis (SP48) 1.86974458056446 0.693902990706675 2.69453310564391 0.00704873239887081 0.859945352662239 FALSE PorphyromonasPorphyromonas pasteri (SP49) -0.616754268535249 0.650498437257365 -0.948125672884952 0.343065480027444 1 FALSE VeillonellaVeillonella atypica (SP5) -2.55445132981393 0.654997026927029 -3.89994339638204 9.62151797544902e-05 0.0125079733680837 TRUE AlloprevotellaAlloprevotella sp._HMT_914 (SP51) -1.09010289079397 0.740759023308355 -1.47160258126238 0.141128228122324 1 FALSE NeisseriaNeisseria elongata (SP53) -0.0767303676953765 0.692699042302741 -0.110770136826379 0.911798626945008 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP54) 0.982615432647225 0.618855135607721 1.58779555361092 0.112332577252121 1 FALSE LeptotrichiaLeptotrichia wadei (SP55) -0.921241264507291 0.818354549425594 -1.12572388722457 0.260282409576682 1 FALSE LeptotrichiaLeptotrichia sp._HMT_498 (SP57) -0.483867481688513 0.821442098598884 -0.589046364331503 0.555830171832337 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP58) 1.43612690903833 0.887553592809972 1.61807345570152 0.105646768253223 1 FALSE AggregatibacterAggregatibacter sp._HMT_513 (SP6) -1.70974495779067 0.620049548574422 -2.75743279181737 0.00582571877973486 0.722389128687123 FALSE NeisseriaNeisseria mucosa (SP60) 0.958972273727828 0.862857460602186 1.11139129869557 0.266399956063734 1 FALSE RothiaRothia aeria (SP61) 0.0287279116238193 0.807605516327169 0.0355717129750032 0.971623863817444 1 FALSE CorynebacteriumCorynebacterium durum (SP62) -0.218749950068706 0.660809941133275 -0.331033079940587 0.740619498700543 1 FALSE GemellaGemella morbillorum (SP63) -1.33326837626383 0.771208370451029 -1.72880433790428 0.0838441195316299 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP64) 1.77037922873474 0.698721339930573 2.53374146109614 0.0112851960196966 1 FALSE KingellaKingella denitrificans (SP66) 0.0297354495691564 0.805313763470182 0.0369240548441929 0.970545559830651 1 FALSE CapnocytophagaCapnocytophaga granulosa (SP67) -0.20876168772927 0.697755245066519 -0.299190424157068 0.764794755275034 1 FALSE Saccharibacteria_(TM7)_[G-6]Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP68) -0.706980263852426 0.778182860311638 -0.9085014588593 0.363613343342957 1 FALSE PrevotellaPrevotella melaninogenica (SP7) -1.32897392130148 0.759968374838616 -1.74872266439205 0.0803389703797997 1 FALSE StreptococcusStreptococcus sp._HMT_056 (SP70) 0.482923676818652 0.841200149529629 0.57408890986133 0.565907637633324 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP72) -0.556875815947608 0.649420718601043 -0.85749622701784 0.39117069909062 1 FALSE NeisseriaNeisseria sp._HMT_018 (SP73) 0.829475923467323 0.643911702134193 1.2881827131237 0.197682368091967 1 FALSE HaemophilusHaemophilus sputorum (SP74) -0.165935367905444 0.571539548632569 -0.290330508715366 0.77156340092521 1 FALSE ActinomycesActinomyces odontolyticus (SP75) -0.0215289717606385 0.579634074444417 -0.0371423501651005 0.970371504760298 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP76) 2.48080333274342 0.881793760244414 2.81336004470682 0.00490267227306627 0.612834034133283 FALSE StreptococcusStreptococcus intermedius (SP77) -0.000919267249095967 0.610755962497642 -0.00150513020836783 0.998799080298176 1 FALSE PrevotellaPrevotella loescheii (SP78) 0.232657143689803 0.688426829513638 0.337954788679824 0.735397258613998 1 FALSE NeisseriaNeisseria sp._Oral_Taxon_14 (SP79) 0.473920110629681 0.720997617765002 0.657311617892402 0.51098056773243 1 FALSE StreptococcusStreptococcus gordonii (SP8) -0.60960448197947 0.735624503842787 -0.828689744285287 0.407279990528097 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP80) -0.551653524222212 0.655643186715877 -0.841392903029237 0.400127859998776 1 FALSE LeptotrichiaLeptotrichia buccalis (SP81) 1.1633589960173 0.817427615143887 1.42319512390405 0.154679598753068 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP82) 0.6471671860333 0.653654522189334 0.990075282988473 0.32213732352096 1 FALSE GranulicatellaGranulicatella adiacens (SP84) -2.00908125243451 0.850652924604825 -2.36181078595344 0.0181859215300118 1 FALSE AggregatibacterAggregatibacter aphrophilus (SP85) 0.128026190691973 0.648508800060255 0.19741627358037 0.843501795734105 1 FALSE PrevotellaPrevotella oris (SP86) -0.246778146842912 0.646028672878785 -0.381992560397107 0.702466882910688 1 FALSE EikenellaEikenella corrodens (SP89) 0.931183623384981 0.755014544207587 1.23333203383822 0.217451911054829 1 FALSE PorphyromonasPorphyromonas sp._Oral_Taxon_C34 (SP9) 0.100197720780421 0.721188458534645 0.138934171220667 0.8895021680898 1 FALSE LeptotrichiaLeptotrichia sp._HMT_221 (SP90) -1.58324928477722 0.581321379698432 -2.72353527681804 0.0064587317511585 0.794424005392495 FALSE PrevotellaPrevotella sp._HMT_306 (SP93) -1.19144299707175 0.457976226297384 -2.60153896350527 0.009280652206613 1 FALSE LeptotrichiaLeptotrichia sp._HMT_392 (SP94) 1.02475648914148 0.662513057670707 1.54677176136627 0.121918291824502 1 FALSE AggregatibacterAggregatibacter segnis (SP95) 0.305712313498853 0.750695385713625 0.407238833908959 0.683832582086302 1 FALSE FusobacteriumFusobacterium periodonticum (SP96) 0.676921764951255 0.850315905499493 0.796082680064202 0.425983980401242 1 FALSE TannerellaTannerella sp._HMT_286 (SP97) 0.680938571205875 0.655621162087274 1.03861591202761 0.29898340247086 1 FALSE StreptococcusStreptococcus chosunense (SP98) 0.755422383700047 0.752072105100318 1.00445473057305 0.315159480896612 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP99) -0.452276370551766 0.668340148791491 -0.676715848014792 0.49858625931489 1 FALSE CardiobacteriumCardiobacterium hominis_nov_97.313% (SPN100) 1.0744386490294 0.565046614346735 1.90150444538383 0.0572359707910564 1 FALSE PorphyromonasPorphyromonas catoniae_nov_97.909% (SPN53) -0.138495023468366 0.723308637703966 -0.191474311585712 0.848154004577604 1 FALSE StreptobacillusStreptobacillus notomytis_nov_93.922% (SPN65) 0.130923146846169 0.758620696384114 0.172580510220985 0.862981172601663 1 FALSE AlloprevotellaAlloprevotella sp._HMT_473_nov_97.436% (SPN76) -0.770822622727957 0.638814614111965 -1.20664525466359 0.227568790621712 1 FALSE StreptococcusStreptococcus pneumoniae_sp._str._M334 (SPP14) -0.669898035480851 0.98705593438285 -0.678682952146679 0.497338770229786 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP15) -0.47694896372234 0.814597615098464 -0.585502528956814 0.558209866637973 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP19) -0.519712416975964 0.801011589614518 -0.648820096630653 0.516454666121764 1 FALSE PorphyromonasPorphyromonas sp._HMT_930_sp._Oral_Taxon_C34 (SPP2) -0.227645489116074 0.79349429463825 -0.286889887746271 0.77419663358944 1 FALSE StreptococcusStreptococcus pneumoniae_sp._str._C300_sp._str._M334 (SPP8) -0.195798904817146 0.894879548007998 -0.218799172752349 0.826806491310791 1 FALSE PseudoleptotrichiaPseudoleptotrichia goodfellowii (SPPN1) -0.218987822681565 0.771957895019827 -0.283678454607865 0.776656807447652 1 FALSE