GroupCF...1 GroupCF...2 GroupCF...3 GroupCF...4 GroupCF...5 GroupCF...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance StreptococcusStreptococcus sp._str._C300 (SP1) -1.10901503342229 0.772028118602644 -1.43649564918643 0.150861353494861 1 FALSE PorphyromonasPorphyromonas sp._HMT_930 (SP10) -0.713983919746902 0.768193019768082 -0.929432969805497 0.352664748071502 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_348 (SP100) 0.118899010325969 0.707673022751733 0.168014049572837 0.866572226238269 1 FALSE HaemophilusHaemophilus sp._HMT_908 (SP101) -0.0775086757273319 0.747115279363432 -0.103743930646649 0.917372563111921 1 FALSE LachnoanaerobaculumLachnoanaerobaculum umeaense (SP104) 1.15016046182217 0.736061222842674 1.56258803769099 0.118149523744441 1 FALSE MoraxellaMoraxella sp._Oral_Taxon_B07 (SP105) -0.694655037345421 0.528092995174698 -1.31540286217132 0.188374544120656 1 FALSE PrevotellaPrevotella histicola (SP106) -1.17747890846319 0.578816675598372 -2.03428642971615 0.0419227245994717 1 FALSE GemellaGemella moribillum (SP108) 0.620456588951649 0.787469114690363 0.78791228427494 0.430748015203007 1 FALSE HaemophilusHaemophilus haemolyticus (SP109) -0.668375085961939 0.83605078482004 -0.799443165531871 0.424033489502676 1 FALSE PorphyromonasPorphyromonas catoniae (SP11) 1.41938231973212 0.725397377056123 1.95669623936662 0.0503831923075607 1 FALSE LeptotrichiaLeptotrichia sp._HMT_219 (SP110) 1.61900151616913 0.636929722764156 2.54188407025968 0.0110256736754306 1 FALSE AlloprevotellaAlloprevotella sp._HMT_308 (SP112) -0.470682413974836 0.66823844990841 -0.704362962112324 0.481206765400133 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP114) 1.30081006955897 0.587570969518969 2.21387736467632 0.0268372162270282 1 FALSE PrevotellaPrevotella pallens (SP116) -0.0225972856448239 0.603096054290406 -0.0374688003412849 0.970111216391471 1 FALSE AlloprevotellaAlloprevotella sp._HMT_912 (SP117) -0.740183183995187 0.57976573993399 -1.27669355571004 0.20171045747734 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP118) -0.763448643306343 0.602223640636978 -1.2677161635482 0.204899330458358 1 FALSE HaemophilusHaemophilus parahaemolyticus (SP12) 0.466418563278064 0.747621330227658 0.623870058838523 0.532712925038764 1 FALSE Ruminococcaceae_[G-1]Ruminococcaceae_[G-1] bacterium_HMT_075 (SP121) -0.90082144844445 0.616442373151116 -1.46132304928951 0.143926807293802 1 FALSE StreptococcusStreptococcus salivarius (SP122) -0.998640228043912 0.624160990601325 -1.59997219160046 0.109604752598136 1 FALSE HaemophilusHaemophilus paraphrohaemolyticus (SP13) 0.757993162921484 0.831867106931318 0.911195017335944 0.362192628919355 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP130) 1.69819244220989 0.749453493565908 2.265907700463 0.023457035048407 1 FALSE NeisseriaNeisseria cinerea (SP131) 0.422321938288975 0.792503335843844 0.532896101742328 0.594105503872379 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP132) -0.326133272007821 0.530251894602059 -0.61505347803156 0.538519403912636 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP137) -0.271526236272855 0.536477749159041 -0.506127675748879 0.612767023063175 1 FALSE StreptococcusStreptococcus oralis_subsp._dentisani_clade_058 (SP138) 0.334391820449058 0.566091620692648 0.590702649934844 0.554719672111887 1 FALSE SelenomonasSelenomonas sputigena (SP139) -1.29061596208894 0.512169963224786 -2.51989779713517 0.0117388913336203 1 FALSE LautropiaLautropia mirabilis (SP14) 0.807721208684416 0.775276766558373 1.04184885130773 0.297481761191061 1 FALSE ActinomycesActinomyces naeslundii (SP142) 0.0675600862236107 0.556839595689992 0.121327733779232 0.903431453899286 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP144) 1.54078893671134 0.69558150904321 2.21510910896802 0.0267525763670914 1 FALSE PorphyromonasPorphyromonas sp._HMT_278 (SP145) 0.0344427075512394 0.680776847360673 0.0505932416544004 0.959649648308679 1 FALSE CardiobacteriumCardiobacterium valvarum (SP147) 1.66395124803466 0.667798298184193 2.49169734717669 0.0127134317928696 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP148) 0.50563230839856 0.609829420293904 0.829137282610723 0.407026729163829 1 FALSE LeptotrichiaLeptotrichia hofstadii (SP15) 0.573093383271284 0.836019900418863 0.685502083125237 0.493027146575119 1 FALSE PrevotellaPrevotella salivae (SP150) -0.868307904382045 0.503247736157223 -1.7254084658431 0.0844538867113807 1 FALSE CorynebacteriumCorynebacterium matruchotii (SP152) 0.886511872093195 0.616187639733105 1.4387044058157 0.150234290522707 1 FALSE HaemophilusHaemophilus sp._HMT_036 (SP155) 0.545896807811014 0.793987302669993 0.687538460596651 0.491743472940639 1 FALSE StreptococcusStreptococcus mutans (SP16) -2.31692955894661 0.64521084521133 -3.59096499406753 0.000329455888214637 0.0418408978032588 TRUE LeptotrichiaLeptotrichia trevisanii (SP166) 1.62227308248452 0.661280987220699 2.45322807374635 0.0141580539235222 1 FALSE ActinomycesActinomyces johnsonii (SP17) 1.91383196462138 0.707220282236953 2.70613274631758 0.00680718291232908 0.823669132391818 FALSE PrevotellaPrevotella oulorum (SP173) -0.904404314570338 0.594346546336122 -1.52167842169788 0.128089676967015 1 FALSE PrevotellaPrevotella veroralis (SP175) -0.655286975258747 0.475250643745381 -1.37882396138283 0.1679490369967 1 FALSE AlloprevotellaAlloprevotella sp._HMT_913 (SP180) 0.569622236677348 0.662003739911772 0.860451689824689 0.389540102950426 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP181) -0.195256307513844 0.733183059826962 -0.266313173629416 0.789998028250892 1 FALSE AggregatibacterAggregatibacter sp._HMT_949 (SP183) 0.0558122391294495 0.564465032029752 0.0988763447910227 0.921236450974729 1 FALSE LeptotrichiaLeptotrichia sp._HMT_417 (SP184) -1.05507836697129 0.42327156711398 -2.49267479543973 0 0 TRUE ArachniaArachnia propionica (SP185) 1.80592873022503 0.630793345818835 2.86294828915918 0.0041971905661544 0.520451630203146 FALSE GranulicatellaGranulicatella elegans (SP19) -0.921030760137354 0.720628256998145 -1.27809415075396 0.201216231118986 1 FALSE NeisseriaNeisseria subflava (SP195) 0.421899606785396 0.641315250769036 0.657866168439739 0.51062413161683 1 FALSE HaemophilusHaemophilus parainfluenzae (SP2) 1.03484678200922 0.568087042440202 1.82163419458409 0.0685105088773381 1 FALSE AbiotrophiaAbiotrophia defectiva (SP20) -0.628053772664032 0.681672681478842 -0.921342148113538 0.356871822445727 1 FALSE BergeyellaBergeyella sp._HMT_206 (SP204) -0.204250757891135 0.72638515919803 -0.281187955597329 0.77856624218284 1 FALSE StreptococcusStreptococcus sanguinis (SP21) 0.652691452429418 0.509006431636971 1.28228527551283 0.199742591310014 1 FALSE PorphyromonasPorphyromonas sp._Oral_Taxon_B43 (SP215) -0.304982784101857 0.574415048529979 -0.530944975906111 0.595456909642255 1 FALSE StreptococcusStreptococcus infantis (SP22) 0.581388936612672 0.803460474394517 0.72360614509482 0.469307567679595 1 FALSE LeptotrichiaLeptotrichia sp._HMT_212 (SP23) 1.77279660144444 0.621313178330198 2.85330597076485 0.00432669406894546 0.532183370480292 FALSE AggregatibacterAggregatibacter sp._HMT_898 (SP24) 1.4949281849501 0.622951849088228 2.39974917345237 0.0164063095166206 1 FALSE KingellaKingella oralis (SP25) 0.414769347439557 0.720004242728248 0.576065143544027 0.56457115054207 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP26) -1.13001804813617 0.487824074743552 -2.31644583906651 0.0205339383926944 1 FALSE LeptotrichiaLeptotrichia shahii (SP27) 0.0235943774192708 0.833505536259661 0.0283074033618902 0.977416975938458 1 FALSE FusobacteriumFusobacterium nucleatum (SP29) 2.07140776241778 0.842005354062042 2.46008858782761 0.0138902724898978 1 FALSE StreptococcusStreptococcus mitis (SP3) 0.143038471696565 0.28585283594768 0.500391997939617 0.616799086741469 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP30) -1.19273137703733 0.604610800521166 -1.97272588582476 0.048526801086966 1 FALSE GranulicatellaGranulicatella paradiacens (SP33) -0.728725054711375 0.767303724221777 -0.949721774712445 0.342253642608079 1 FALSE NeisseriaNeisseria flavescens|subflava (SP35) 0.344097460830966 0.83490854707056 0.412137906646541 0.680238345965622 1 FALSE AlloprevotellaAlloprevotella sp._HMT_473 (SP36) -1.50854269740153 0.868535560442996 -1.73688075204669 0.0824082215460488 1 FALSE VeillonellaVeillonella parvula (SP37) -0.150858851426885 0.286433828953249 -0.526679589412282 0.598416111776799 1 FALSE StreptococcusStreptococcus cristatus (SP38) 0.081927088625385 0.434637974435174 0.188495008361503 0.850488628135961 1 FALSE LeptotrichiaLeptotrichia sp._HMT_225 (SP39) -0.056550323709187 0.599180242500648 -0.0943794866686144 0.92480771032764 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP4) -1.06500221029978 0.542500972492384 -1.96313419569903 0.0496305830692987 1 FALSE StreptococcusStreptococcus oralis (SP40) -1.29983849088173 0.658129122272873 -1.97505086295633 0.0482623762278326 1 FALSE VeillonellaVeillonella sp._HMT_780 (SP41) -0.991806767368304 0.865624078380358 -1.14577077063758 0.251890012340014 1 FALSE GemellaGemella haemolysans (SP42) 0.225009808410755 0.564055910008458 0.398914016178611 0.689956561205132 1 FALSE RothiaRothia dentocariosa (SP44) 0.60035718459168 0.812837625359078 0.738594235627894 0.460153425561162 1 FALSE RothiaRothia mucilaginosa (SP45) -0.101964914037129 0.829033565745223 -0.122992503862581 0.902113033949197 1 FALSE NeisseriaNeisseria sicca (SP47) -0.465899799712042 0.817242349951385 -0.570087685421291 0.568618227062392 1 FALSE CardiobacteriumCardiobacterium hominis (SP48) 2.42109034316437 0.647145554824215 3.74118361026526 0.000183155647357365 0.0236270785091001 TRUE PorphyromonasPorphyromonas pasteri (SP49) -0.874109199590949 0.684134650723116 -1.277685903889 0.201360197418842 1 FALSE VeillonellaVeillonella atypica (SP5) -1.72001592319231 0.714986681317215 -2.40566148732104 0.0161432154336663 1 FALSE AlloprevotellaAlloprevotella sp._HMT_914 (SP51) -1.23836072268384 0.728051110128192 -1.70092553318927 0.0889569713430596 1 FALSE NeisseriaNeisseria elongata (SP53) 0.630704378938157 0.717789838499663 0.878675546949044 0.379577220859531 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP54) 1.60463455390399 0.567753385333509 2.8262879541641 0.00470909105852875 0.574509109140507 FALSE LeptotrichiaLeptotrichia wadei (SP55) -0.774054354805884 0.810962680450798 -0.954488256322231 0.339836550998268 1 FALSE LeptotrichiaLeptotrichia sp._HMT_498 (SP57) -0.382259923019373 0.809132002695664 -0.47243208987638 0.636618403818755 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP58) 1.11731775826701 0.906044828633681 1.23318154130622 0.217508040523199 1 FALSE AggregatibacterAggregatibacter sp._HMT_513 (SP6) -0.618157692221385 0.720337707481926 -0.858149845275031 0.390809726532767 1 FALSE NeisseriaNeisseria mucosa (SP60) 0.251665685734166 0.938471817406636 0.26816541644225 0.788571994014662 1 FALSE RothiaRothia aeria (SP61) 0.432857980192352 0.821346320861674 0.527010311239041 0.598186428003836 1 FALSE CorynebacteriumCorynebacterium durum (SP62) 1.08400504793274 0.675252247531305 1.60533349114471 0.108420432493154 1 FALSE GemellaGemella morbillorum (SP63) -1.64192054087805 0.749228203153266 -2.191482560277 0.0284168904087218 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP64) 1.50375578797845 0.740354414747914 2.03112962930122 0.0422418465270567 1 FALSE KingellaKingella denitrificans (SP66) 0.316861344002698 0.80589451148729 0.393179677347506 0.694186778649518 1 FALSE CapnocytophagaCapnocytophaga granulosa (SP67) -1.0282381030633 0.613797598310651 -1.67520711370216 0.0938936023153955 1 FALSE Saccharibacteria_(TM7)_[G-6]Saccharibacteria_(TM7)_[G-6] bacterium_HMT_870 (SP68) -2.45256675950013 0.583689374798027 -4.20183554026281 2.64759453493173e-05 0.00344187289541125 TRUE PrevotellaPrevotella melaninogenica (SP7) -0.669443905297716 0.733359214404233 -0.912845836186239 0.361323627537407 1 FALSE StreptococcusStreptococcus sp._HMT_056 (SP70) 0.838512277566655 0.81131720708104 1.03351965205256 0.301360778652401 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP72) -0.40965104314458 0.639219379449969 -0.640861426161818 0.521612719526604 1 FALSE NeisseriaNeisseria sp._HMT_018 (SP73) 1.30393649013226 0.652224055699696 1.99921557436794 0 0 TRUE HaemophilusHaemophilus sputorum (SP74) -0.431971516515123 0.540638043195913 -0.799003181429073 0.424288567252558 1 FALSE ActinomycesActinomyces odontolyticus (SP75) 0.143830521405411 0.567665533760459 0.253371946774037 0.799980803752137 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP76) 3.0463028146761 0.84145640998365 3.62027406117839 0.000294291135576069 0.0376692653537368 TRUE StreptococcusStreptococcus intermedius (SP77) 0.280263831580804 0.606743445280976 0.461914889663153 0.644142355896114 1 FALSE PrevotellaPrevotella loescheii (SP78) 0.562793748822638 0.714629059092534 0.78753269498626 0.430970096858925 1 FALSE NeisseriaNeisseria sp._Oral_Taxon_14 (SP79) 2.13691446921346 0.720388324182525 2.96633690119613 0.00301370159926189 0.376712699907736 FALSE StreptococcusStreptococcus gordonii (SP8) -1.23980778307616 0.721601775892435 -1.71813294326062 0.0857723691977466 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP80) 1.09099456661172 0.654003138855874 1.66817940433792 0.0952801181126921 1 FALSE LeptotrichiaLeptotrichia buccalis (SP81) 1.36995567381766 0.828718663062242 1.65310102798392 0.0983103041696631 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP82) 0.574144419295866 0.671632964811192 0.854848480311367 0.392635035238845 1 FALSE GranulicatellaGranulicatella adiacens (SP84) -2.09037135018092 0.807356010857685 -2.58915685530134 0.00962112585300331 1 FALSE AggregatibacterAggregatibacter aphrophilus (SP85) 0.323596843738301 0.667042261560086 0.485121951615882 0.627589841488645 1 FALSE PrevotellaPrevotella oris (SP86) 0.125094616977377 0.620818632146829 0.201499456523707 0.840308054348226 1 FALSE EikenellaEikenella corrodens (SP89) 0.998173624791719 0.748112606514399 1.33425585413191 0.18212002011473 1 FALSE PorphyromonasPorphyromonas sp._Oral_Taxon_C34 (SP9) -0.36334857298223 0.670125912258469 -0.542209406225864 0.587674256169422 1 FALSE LeptotrichiaLeptotrichia sp._HMT_221 (SP90) -0.975825260112846 0.642078447665563 -1.519791333381 0.128563427985067 1 FALSE PrevotellaPrevotella sp._HMT_306 (SP93) -0.36055809473103 0.516649376178771 -0.697877731698392 0.485253661666656 1 FALSE LeptotrichiaLeptotrichia sp._HMT_392 (SP94) 1.75200070331717 0.588823982243464 2.97542348163523 0.00292584332977312 0.368656259551413 FALSE AggregatibacterAggregatibacter segnis (SP95) 0.420368520931118 0.740670244946631 0.567551516750085 0.570339536224156 1 FALSE FusobacteriumFusobacterium periodonticum (SP96) 0.489544576792074 0.868653260020056 0.563567305072649 0.573048642909274 1 FALSE TannerellaTannerella sp._HMT_286 (SP97) 1.23244028277079 0.614680944078921 2.0050081178579 0.0449621791943786 1 FALSE StreptococcusStreptococcus chosunense (SP98) -0.577071135335409 0.720117363446761 -0.801357062928357 0.422924964721054 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP99) 1.03189769836649 0.598045642719927 1.72544973937674 0.0844464540995938 1 FALSE CardiobacteriumCardiobacterium hominis_nov_97.313% (SPN100) 0.766596542098983 0.551468773202739 1.39009963818415 0.164498623159989 1 FALSE PorphyromonasPorphyromonas catoniae_nov_97.909% (SPN53) 0.17941481162675 0.739908019443373 0.242482588257014 0.808406246906979 1 FALSE StreptobacillusStreptobacillus notomytis_nov_93.922% (SPN65) -0.990500933031293 0.70455087729205 -1.40586147140757 0.159765264109015 1 FALSE AlloprevotellaAlloprevotella sp._HMT_473_nov_97.436% (SPN76) 0.246171651928172 0.690178497216992 0.356678240369427 0.721332697167009 1 FALSE StreptococcusStreptococcus pneumoniae_sp._str._M334 (SPP14) -1.13252846554842 0.959897364523162 -1.17984329096581 0.238062547967929 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP15) 0.476308166823328 0.810340826663423 0.587787448380857 0.556674969920037 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP19) -0.0117058951214381 0.786006090409172 -0.0148928809385489 0.988117639481987 1 FALSE PorphyromonasPorphyromonas sp._HMT_930_sp._Oral_Taxon_C34 (SPP2) -0.656975033985058 0.760800061498601 -0.863531783489829 0.387845152214555 1 FALSE StreptococcusStreptococcus pneumoniae_sp._str._C300_sp._str._M334 (SPP8) 0.45775034764673 0.889636890138418 0.51453615820215 0.606877187094791 1 FALSE LeptotrichiaLeptotrichia goodfellowii (SPPN1) -0.550139220860825 0.749663636662469 -0.733848080600608 0.463041333210051 1 FALSE