#Species	F4401.S01	F4401.S02	F4401.S03	F4401.S04	F4401.S05	F4401.S06	F4401.S07	F4401.S08	F4401.S09	F4401.S10	F4401.S11	F4401.S12	F4401.S13	F4401.S14	F4401.S15	F4401.S16	F4401.S17	F4401.S18	F4401.S19	F4401.S20	F4401.S21	F4401.S22	F4401.S23	F4401.S24	F4401.S25	F4401.S26	F4401.S27	F4401.S28	F4401.S29	F4401.S30	F4401.S31	F4401.S32	F4401.S33	F4401.S34	F4401.S35	F4401.S36	F4401.S37	F4401.S38	F4401.S39	F4401.S40	F4401.S41	F4401.S42	F4401.S43	F4401.S44	F4401.S45	F4401.S46	F4401.S47
Acinetobacter johnsonii (SP10)	0	0	17	20	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	125	0	0	77	56	81	68	0	0	0	0	0	106	30	54	0	211	0	0	0	0	0	0	9	0
Corynebacterium mastitidis (SP11)	0	0	1193	777	169	129	0	0	0	0	1464	0	0	0	0	0	0	0	0	0	0	114	0	0	0	0	0	0	0	0	0	0	231	0	0	0	0	0	0	0	0	81	66	12851	346	30	0
Staphylococcus saprophyticus (SP12)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1746	0	0	0	0	0	0	0	0	0	0
Sutterella sp._str._cont1.66 (SP14)	0	0	0	0	0	0	565	727	444	498	0	385	411	213	0	453	409	78	106	327	281	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Propionibacterium acnes (SP16)	34	0	0	0	27	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	99	219	481	160	297	533	269	135	175	68	12	508	291	0	0	158	0	245	317	0	0	44	0	0	0
Acutalibacter muris (SP18)	0	0	0	0	0	0	102	0	87	92	0	0	131	288	0	448	62	0	264	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Akkermansia muciniphila (SP20)	25	29	0	0	0	0	1365	2251	221	203	0	1022	650	618	0	191	461	1839	79	86	412	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bifidobacterium pseudolongum (SP26)	0	0	179	114	0	0	0	135	39	164	0	37	42	11	0	0	122	0	0	37	0	0	0	0	0	0	0	0	0	51	0	0	0	0	0	0	0	0	153	0	0	0	0	45	0	0	0
Escherichia coli (SP3)	568	4283	5143	0	4798	0	0	0	0	0	0	0	0	0	0	0	0	4766	899	4301	3937	0	294	120	0	144	0	0	179	0	43	0	0	0	135	0	96	0	0	0	71	0	0	0	0	927	7616
Staphylococcus cohnii (SP34)	315	0	0	0	0	142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	124	87	0	0	36	0	0	81	0	0	0	0	0	222	197	0	58	0	0
Streptococcus thoraltensis (SP5)	37725	28917	16595	13243	29160	30004	0	0	0	0	8251	0	0	0	0	0	0	0	0	0	0	22323	0	0	0	0	0	283	171	0	0	0	10600	0	0	0	2575	0	0	0	0	17497	21501	2084	8749	4325	11847
Streptococcus danieliae (SP6)	83	71	273	785	352	210	0	0	0	0	87	0	0	0	0	0	0	0	0	0	0	459	0	0	0	0	0	0	248	0	0	0	62	0	0	0	0	0	0	0	0	539	344	215	214	174	406
Lactobacillus murinus (SP7)	200	338	0	20	0	0	0	0	529	360	231	1269	1789	226	3986	812	684	478	0	301	666	286	0	0	0	0	0	0	360	257	0	0	52	0	0	27	0	0	0	73	90	620	87	2323	266	0	0
Bacteroides thetaiotaomicron (SP9)	382	86	3824	2683	3455	17042	882	3618	1063	773	250	222	631	137	0	140	727	460	194	738	1296	2097	0	0	0	0	71	0	92	0	124	0	0	0	0	0	0	0	0	0	0	898	2836	309	766	28	429
Allobaculum stercoricanis_nov_86.139% (SPN101)	118	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	312	1046	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	156	0	0	0	25	0	0	0
Hathewaya proteolytica_nov_83.768% (SPN116)	0	0	0	0	0	0	125	0	187	209	0	116	204	299	0	124	0	56	56	0	109	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Faecalibaculum rodentium_nov_84.906% (SPN121)	0	0	67	0	0	0	0	0	0	0	0	0	101	35	0	0	402	31	79	130	76	0	0	0	0	101	0	0	0	0	0	117	0	0	0	0	0	0	0	155	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_87.329% (SPN132)	0	0	0	0	0	0	0	0	0	0	0	134	199	80	0	196	198	17	85	106	163	0	0	0	0	0	0	105	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_78.641% (SPN140)	0	0	0	0	0	0	93	119	101	0	0	0	141	139	0	227	125	77	106	101	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_86.047% (SPN146)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	477	234	244	226	0	0	0	0	0	0	0	0	92	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
Erysipelatoclostridium sp._str._HGF2_nov_88.787% (SPN157)	0	0	0	0	0	0	113	0	183	0	0	321	46	0	0	324	81	0	62	0	22	0	0	0	0	0	0	0	109	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_84.660% (SPN158)	0	0	0	0	0	0	0	0	0	0	0	97	126	42	0	543	95	0	134	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	100	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_84.854% (SPN160)	0	0	0	0	0	0	0	0	0	0	0	0	222	194	0	0	204	197	61	54	204	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Lacnoclostridium hathewayi_nov_94.212% (SPN161)	0	0	0	0	0	0	0	0	0	0	0	0	44	292	0	148	0	0	482	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_86.133% (SPN162)	0	0	0	0	0	0	129	173	109	78	0	91	233	95	0	58	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Alistipes finegoldii_nov_92.789% (SPN163)	0	0	0	0	0	0	0	0	0	0	0	124	171	113	0	0	144	36	116	0	142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_83.268% (SPN164)	20	0	0	0	0	0	4206	4687	7135	5663	0	6827	7107	4372	0	3107	4398	542	3163	5378	4422	0	0	183	0	58	0	0	157	0	0	0	0	122	118	0	52	0	0	69	0	0	0	115	0	0	0
Acetivibrio cellulolyticus_nov_83.851% (SPN165)	0	0	0	0	0	0	210	0	0	0	0	68	173	105	0	143	63	0	79	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Eubacterium siraeum_nov_91.252% (SPN166)	0	0	0	0	0	0	36	40	123	104	0	205	0	246	0	0	0	0	0	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Barnesiella viscericola_nov_84.831% (SPN192)	12	0	0	0	0	0	0	0	0	0	0	1472	1754	1684	466	1902	3129	0	2657	2421	2876	0	0	0	0	0	0	0	0	0	87	0	0	0	48	0	0	0	28	61	0	0	0	37	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_86.127% (SPN216)	0	0	0	0	0	0	662	734	641	439	0	446	666	426	0	534	744	238	459	544	321	0	0	0	155	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Gabonia massiliensis_nov_86.891% (SPN227)	0	0	0	0	0	0	887	650	615	542	0	591	537	359	126	691	439	167	431	439	416	0	0	94	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Alistipes senegalensis_nov_93.846% (SPN256)	0	0	0	0	0	0	0	0	0	0	0	453	65	871	0	2283	335	94	466	113	234	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_85.853% (SPN264)	0	0	0	0	0	0	500	736	585	638	0	157	102	103	0	107	352	0	215	550	376	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_85.910% (SPN271)	0	9	0	0	0	0	888	655	696	571	0	803	708	505	0	488	593	252	514	621	751	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	75	0	0	0	0	45	0	0	0
Barnesiella viscericola_nov_86.116% (SPN275)	0	0	0	0	0	0	1005	924	785	825	0	0	168	163	0	0	169	0	0	96	183	0	0	0	0	0	0	0	0	0	0	0	0	0	91	0	0	0	0	0	0	0	0	0	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_85.934% (SPN29)	0	0	0	0	0	0	28	0	317	205	0	328	224	151	0	182	400	150	391	323	177	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Barnesiella viscericola_nov_84.615% (SPN3)	0	0	0	0	0	0	438	865	582	373	0	175	214	160	0	94	384	0	78	213	283	0	0	93	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	234	0	0	0	0	0	0
Turicibacter sanguinis_nov_95.635% (SPN40)	0	0	0	0	0	0	189	0	585	187	0	544	96	46	0	0	424	0	109	192	437	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0
Bacteroidetes_[G-7] bacterium HMT911 nov_84.333% (SPN51)	0	0	0	0	0	0	230	339	0	0	0	261	256	206	0	316	265	0	341	289	239	0	0	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Alistipes finegoldii_nov_93.690% (SPN57)	11	0	0	0	0	0	0	0	0	0	0	332	231	300	0	396	173	247	214	114	216	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Barnesiella viscericola_nov_83.364% (SPN62)	0	0	0	0	0	0	302	326	253	252	0	0	187	201	0	0	0	0	63	296	314	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Streptococcus acidominimus_nov_94.788% (SPN76)	0	27	3611	16156	0	0	0	0	0	0	16642	0	0	0	0	0	0	0	0	0	0	6029	0	109	0	0	0	0	375	0	0	0	15717	0	0	0	57	0	0	0	0	10443	9561	10159	20412	21989	3245
Bacteroidetes_[G-7] bacterium HMT911 nov_87.476% (SPN77)	0	0	0	0	0	0	164	298	164	100	0	228	225	115	0	168	124	0	135	154	173	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Parabacteroides distasonis_nov_83.426% (SPN86)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1854	0	0	0	0	0	0	0	0	112	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Alistipes senegalensis_nov_94.073% (SPN94)	0	0	0	0	0	0	0	0	239	187	0	160	269	230	0	202	72	218	195	0	103	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Cutibacterium acnes (SPP1)	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	162	149	165	153	30	179	0	102	0	151	0	0	0	0	0	0	0	0	0	0	0	0	0
multigenus multispecies_spp4_3 (SPP4)	236	1829	2269	0	2150	0	0	0	0	0	0	0	0	0	0	0	0	2032	476	1807	1741	0	207	0	0	61	132	112	0	0	0	70	0	0	0	0	0	0	0	307	0	0	0	0	0	387	3269
Clostridium glycyrrhizinilyticum (SPPN8)	0	0	0	0	0	0	61	0	0	0	0	47	0	121	0	638	0	0	58	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0