ANCOM Volcano Plot


ANCOM statistical results

W
Actinomyces sp._Oral_Taxon_171_nov_97.974% (SPN21) 57
Streptococcus sp._str._C150 (SP345) 42
Staphylococcus aureus (SP237) 41
Streptococcus multispecies_sppn24_2_nov_92.724% (SPPN24) 39
Lactobacillus salivarius_nov_95.818% (SPN415) 18
Lactobacillus salivarius (SP149) 15
Lactobacillus gasseri_nov_94.803% (SPN114) 14
Streptococcus salivarius_nov_94.019% (SPN209) 9
Bergeyella sp. HMT322 (SP201) 8
Prevotella melaninogenica_nov_96.415% (SPN55) 7
Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP208) 7
Neisseria bacilliformis (SP142) 7
Streptococcus parasanguinis_II_nov_97.186% (SPN208) 7
Prevotella sp. HMT515 (SP239) 6
Haemophilus parainfluenzae_nov_97.529% (SPN154) 6
Prevotella salivae_nov_97.538% (SPN203) 6
Streptococcus sp._str._2136FAA (SP52) 6
Bacteroidetes_[G-3] bacterium HMT365 (SP90) 5
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP214) 5
Lactobacillus crispatus (SP365) 5
Fretibacterium sp. HMT360 (SP113) 5
Lactobacillus ultunensis (SP241) 5
Colibacter massiliensis (SP409) 5
Prevotella melaninogenica_nov_97.159% (SPN120) 5
Treponema sp._ovinefootrot (SP389) 5
Porphyromonas sp. HMT277 (SP290) 4
Capnocytophaga sp. HMT336 (SP156) 4
Selenomonas flueggei (SP253) 4
Pseudoramibacter alactolyticus (SP399) 4
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP382) 4
Capnocytophaga sp. HMT335 (SP240) 4
Prevotella sp. HMT315 (SP302) 4
Leptotrichia sp. HMT392 (SP73) 4
Actinomyces sp. HMT448 (SP231) 4
Mycoplasma salivarium (SP356) 4
Kingella sp. HMT932 (SP342) 4
Selenomonas sp. HMT478 nov_97.897% (SPN133) 4
Gemella haemolysans_nov_93.220% (SPN163) 4
Prevotella multisaccharivorax (SP336) 4
Veillonellaceae_[G-1] bacterium HMT132 (SP282) 4
Actinomyces sp. HMT171 (SP144) 3
Fusobacterium multispecies_sppn2_2_nov_97.217% (SPPN2) 3
Capnocytophaga sp. HMT338 (SP338) 2
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP206) 2
Actinomyces dentalis (SP217) 2
Streptococcus oralis_subsp._tigurinus_clade_070 (SP125) 1
Selenomonas sp._Oral_Taxon_E83 (SP303) 1
Actinomyces sp._Oral_Taxon_180 (SP66) 1
Ruminococcaceae_[G-1] bacterium HMT075 (SP347) 1
Dialister invisus (SP145) 1
Fusobacterium nucleatum_ss_nucleatum (SP168) 1
Peptostreptococcus stomatis (SP64) 1
Streptococcus multispecies_spp15_2 (SPP15) 1
Streptococcus parasanguinis_I_nov_95.522% (SPN225) 1
Leptotrichia shahii (SP161) 1
Absconditabacteria_(SR1)_[G-1] bacterium HMT874 (SP353) 1
Prevotella histicola (SP101) 1
Parvimonas sp._Oral_Taxon_110 (SP213) 1
Streptococcus parasanguinis_clade_411 (SP327) 1
Prevotella scopos (SP379) 1
Streptococcus gordonii_nov_96.679% (SPN1) 1
Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP32) 1
Treponema lecithinolyticum (SP274) 1
Prevotella marshii (SP262) 1
Actinomyces meyeri (SP441) 0
Corynebacterium durum (SP46) 0
Streptococcus salivarius (SP47) 0
Stomatobaculum sp. HMT097 (SP51) 0
Streptococcus vestibularis (SP48) 0
Abiotrophia defectiva (SP50) 0
Prevotella salivae (SP49) 0
Veillonella atypica (SP5) 0
Streptococcus parasanguinis_I (SP45) 0
Actinomyces viscosus (SP41) 0
Actinomyces sp. HMT175 (SP44) 0
Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP4) 0
Selenomonas sp. HMT149 (SP317) 0
Streptococcus pneumoniae (SP36) 0
Streptococcus sp._str._M334 (SP37) 0
Streptococcus sp._str._C300 (SP38) 0
Neisseria elongata (SP355) 0
Actinomyces naeslundii (SP33) 0
Haemophilus sputorum (SP40) 0
Streptococcus infantis (SP34) 0
Leptotrichia sp. HMT847 (SP351) 0
Bifidobacterium dentium (SP35) 0
Butyrivibrio sp. HMT455 (SP326) 0
Prevotella sp. HMT472 (SP413) 0
Haemophilus parainfluenzae (SP42) 0
Megasphaera micronuciformis (SP43) 0
Peptidiphaga sp. HMT183 (SP357) 0
Prevotella sp. HMT306 (SP68) 0
Prevotella sp. HMT309 (SP53) 0
Granulicatella elegans (SP91) 0
Treponema sp. HMT237 (SP93) 0
Streptococcus australis (SP94) 0
Actinomyces sp. HMT169 (SP95) 0
Prevotella veroralis (SP96) 0
Treponema sp. HMT231 (SP98) 0
Prevotella sp. HMT314 (SP99) 0
Actinomyces sp. HMT175 nov_97.633% (SPN109) 0
Streptococcus parasanguinis_II_nov_97.373% (SPN113) 0
Campylobacter concisus_nov_97.000% (SPN173) 0
Prevotella veroralis_nov_97.348% (SPN216) 0
Streptococcus lactarius_nov_97.868% (SPN325) 0
Prevotella sp. HMT305 nov_94.477% (SPN371) 0
Actinomyces viscosus_nov_97.765% (SPN383) 0
Capnocytophaga gingivalis_nov_97.665% (SPN392) 0
Streptococcus australis_nov_97.373% (SPN466) 0
Cutibacterium acnes (SPP11) 0
Capnocytophaga multispecies_spp12_2 (SPP12) 0
Eubacterium_[XIVa][G-1] saburreum (SPP16) 0
Streptococcus multispecies_spp26_2 (SPP26) 0
Streptococcus multispecies_spp27_3 (SPP27) 0
Oribacterium multispecies_spp3_2 (SPP3) 0
Streptococcus multispecies_spp38_2 (SPP38) 0
Granulicatella multispecies_spp42_2 (SPP42) 0
Fusobacterium multispecies_spp5_2 (SPP5) 0
Fusobacterium multispecies_spp6_2 (SPP6) 0
Streptococcus multispecies_spp7_2 (SPP7) 0
Fusobacterium multispecies_spp9_2 (SPP9) 0
Granulicatella paradiacens (SP92) 0
Leptotrichia wadei (SP89) 0
Porphyromonas pasteri (SP56) 0
Prevotella dentalis (SP88) 0
Streptococcus oralis (SP57) 0
Neisseria flavescens|subflava (SP58) 0
Aggregatibacter sp. HMT458 (SP59) 0
Fusobacterium nucleatum_ss_polymorphum (SP6) 0
Cardiobacterium hominis (SP60) 0
Rothia mucilaginosa (SP61) 0
Gemella haemolysans (SP62) 0
Campylobacter showae (SP63) 0
Prevotella pallens (SP65) 0
Fusobacterium periodonticum (SP67) 0
Streptococcus lactarius (SP308) 0
Granulicatella adiacens (SP69) 0
Streptococcus intermedius (SP7) 0
Neisseria sicca (SP70) 0
Parvimonas micra (SP72) 0
Streptococcus parasanguinis_II (SP74) 0
Leptotrichia sp. HMT221 (SP75) 0
Capnocytophaga gingivalis (SP76) 0
Actinomyces odontolyticus (SP77) 0
Ruminococcaceae_[G-2] bacterium HMT085 (SP79) 0
Actinomyces graevenitzii (SP8) 0
Prevotella jejuni (SP81) 0
Neisseria mucosa (SP82) 0
Selenomonas sp. HMT136 (SP84) 0
Haemophilus haemolyticus (SP85) 0
Leptotrichia sp. HMT498 (SP86) 0
Alloprevotella sp. HMT473 (SP87) 0
Tannerella sp. HMT286 (SP31) 0
Porphyromonas endodontalis (SP10) 0
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP306) 0
Filifactor alocis (SP158) 0
Fusobacterium nucleatum_ss_animalis (SP14) 0
Neisseria sp._Oral_Taxon_14 (SP141) 0
Atopobium parvulum (SP143) 0
Prevotella nanceiensis (SP147) 0
Bacillus megaterium (SP148) 0
Campylobacter concisus (SP15) 0
Ottowia sp. HMT894 (SP150) 0
Corynebacterium sp._Oral_Taxon_A16 (SP151) 0
Mogibacterium vescum (SP152) 0
Propionibacterium acnes (SP153) 0
Anaeroglobus geminatus (SP154) 0
Prevotella maculosa (SP155) 0
Tannerella forsythia (SP157) 0
Capnocytophaga leadbetteri (SP16) 0
Lautropia mirabilis (SP30) 0
Eikenella corrodens (SP160) 0
Schaalia lingnae_[Not_Validly_Published] (SP162) 0
Gemella sanguinis (SP163) 0
Leptotrichia goodfellowii (SP164) 0
Oribacterium sp._Oral_Taxon_78 (SP165) 0
Treponema socranskii (SP166) 0
Campylobacter gracilis (SP167) 0
Prevotella intermedia (SP169) 0
Pseudopropionibacterium propionicum (SP17) 0
Treponema denticola (SP171) 0
Oribacterium sinus (SP172) 0
Actinomyces sp._str._ChDCB197 (SP173) 0
Alloprevotella sp. HMT308 (SP174) 0
Selenomonas noxia (SP139) 0
Leptotrichia sp. HMT417 (SP138) 0
Prevotella loescheii (SP136) 0
Prevotella oulorum (SP135) 0
Haemophilus sp. HMT036 (SP102) 0
Streptococcus mutans (SP103) 0
Prevotella sp. HMT317 (SP104) 0
Rothia aeria (SP106) 0
Fretibacterium fastidiosum (SP107) 0
Prevotella denticola (SP108) 0
Staphylococcus epidermidis (SP11) 0
Prevotella sp. HMT305 (SP112) 0
Streptococcus sp._Oral_Taxon_71 (SP114) 0
Corynebacterium matruchotii (SP115) 0
Saccharibacteria_(TM7)_[G-5] bacterium HMT356 (SP117) 0
Capnocytophaga ochracea (SP118) 0
Selenomonas sp. HMT478 (SP119) 0
Selenomonas artemidis (SP120) 0
Stomatobaculum longum (SP121) 0
Porphyromonas gingivalis (SP123) 0
Streptococcus infantis_clade_431 (SP124) 0
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 (SP126) 0
Kingella oralis (SP127) 0
Alloprevotella tannerae (SP128) 0
Streptococcus thermophilus (SP129) 0
Fusobacterium nucleatum (SP13) 0
Schaalia sp. HMT180 (SP130) 0
Capnocytophaga sp. HMT380 (SP131) 0
Capnocytophaga sp. HMT326 (SP132) 0
Selenomonas sputigena (SP133) 0
Bergeyella sp. HMT931 (SP134) 0
Propionibacterium acidifaciens (SP175) 0
Solobacterium moorei (SP176) 0
Capnocytophaga sputigena (SP177) 0
Prevotella oralis (SP238) 0
Kingella denitrificans (SP243) 0
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP244) 0
Prevotella pleuritidis (SP248) 0
Actinomyces sp. HMT170 (SP249) 0
Streptococcus sp. HMT074 (SP25) 0
Prevotella sp. HMT300 (SP250) 0
Leptotrichia sp._AF189244.1 (SP254) 0
Haemophilus influenzae (SP255) 0
Leptotrichia buccalis (SP26) 0
Porphyromonas catoniae (SP260) 0
Mogibacterium timidum (SP263) 0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP267) 0
Lachnoanaerobaculum orale (SP27) 0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP277) 0
Streptococcus cristatus (SP28) 0
Alloscardovia urinalis (SP280) 0
Haemophilus aegyptius (SP281) 0
Streptococcus oralis_subsp._dentisani_clade_058 (SP284) 0
Streptococcus sp. HMT057 (SP100) 0
Streptococcus gordonii (SP29) 0
Actinomyces sp._Oral_Taxon_848 (SP291) 0
Leptotrichia sp. HMT223 (SP293) 0
Peptococcus sp._Oral_Taxon_167 (SP294) 0
Neisseria sp. HMT499 (SP295) 0
Selenomonas sp. HMT892 (SP297) 0
Bifidobacterium longum (SP299) 0
Veillonella parvula (SP3) 0
Streptococcus mitis (SP24) 0
Haemophilus sp. HMT908 (SP236) 0
Capnocytophaga granulosa (SP178) 0
Cardiobacterium valvarum (SP233) 0
Prevotella oris (SP18) 0
Gemella moribillum (SP180) 0
Leptotrichia sp. HMT219 (SP183) 0
Enterobacter cloacae (SP187) 0
Porphyromonas sp. HMT278 (SP188) 0
Neisseria cinerea (SP189) 0
Leptotrichia sp. HMT215 (SP19) 0
Alloprevotella rava (SP191) 0
Actinomyces oris (SP193) 0
Rothia dentocariosa (SP195) 0
Veillonellaceae_[G-1] bacterium HMT155 (SP196) 0
Leptotrichia sp. HMT212 (SP197) 0
Streptococcus constellatus (SP2) 0
Streptococcus sanguinis (SP20) 0
Prevotella baroniae (SP202) 0
Selenomonas infelix (SP203) 0
Streptococcus sp. HMT066 (SP207) 0
Atopobium rimae (SP21) 0
Catonella morbi (SP210) 0
Streptococcus anginosus (SP212) 0
Aggregatibacter segnis (SP216) 0
Gemella morbillorum (SP218) 0
Prevotella melaninogenica (SP22) 0
Streptococcus sp. HMT064 (SP220) 0
Scardovia wiggsiae (SP224) 0
Veillonella sp. HMT780 (SP226) 0
Streptococcus sp. HMT061 (SP23) 0
Leptotrichia trevisanii (SP285) 0
Download table as TSV

Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Baseline Visit Baseline Visit Baseline Visit Baseline Visit Baseline Visit Final Intervention Visit Final Intervention Visit Final Intervention Visit Final Intervention Visit Final Intervention Visit Post Intervention Visit Post Intervention Visit Post Intervention Visit Post Intervention Visit Post Intervention Visit
Actinomyces sp._Oral_Taxon_171_nov_97.974% (SPN21) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 73.0 73.0 73.0 73.0 73.0
Streptococcus sp._str._C150 (SP345) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 45.0 45.0 45.0 45.0 45.0
Staphylococcus aureus (SP237) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 40.0 40.0 40.0 40.0 40.0
Streptococcus multispecies_sppn24_2_nov_92.724% (SPPN24) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 37.0 37.0 37.0 37.0 37.0
Lactobacillus salivarius_nov_95.818% (SPN415) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 16.0 16.0 16.0 16.0 16.0
Lactobacillus salivarius (SP149) 1.0 1.0 1.0 1.0 80.0 1.0 1.00 1.0 1.00 34.0 1843.0 1843.0 1843.0 1843.0 1843.0
Lactobacillus gasseri_nov_94.803% (SPN114) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 12.0 12.0 12.0 12.0 12.0
Streptococcus salivarius_nov_94.019% (SPN209) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 1.0 5.0 5.0 5.0 5.0 5.0
Bergeyella sp. HMT322 (SP201) 16.0 27.0 40.0 58.0 85.0 1.0 1.00 5.0 20.50 39.0 1.0 1.0 1.0 1.0 1.0
Prevotella melaninogenica_nov_96.415% (SPN55) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT346 (SP208) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 6.0 1.0 1.0 1.0 1.0 1.0
Neisseria bacilliformis (SP142) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 2.0 1.0 1.0 1.0 1.0 1.0
Streptococcus parasanguinis_II_nov_97.186% (SPN208) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT515 (SP239) 1.0 1.0 1.0 1.0 6.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Haemophilus parainfluenzae_nov_97.529% (SPN154) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 6.0 1.0 1.0 1.0 1.0 1.0
Prevotella salivae_nov_97.538% (SPN203) 1.0 1.0 1.0 1.0 5.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp._str._2136FAA (SP52) 1.0 1.0 1.0 1.0 4.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Bacteroidetes_[G-3] bacterium HMT365 (SP90) 1.0 1.0 1.0 1.0 6.0 1.0 1.00 1.0 1.00 6.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT349 (SP214) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 14.0 1.0 1.0 1.0 1.0 1.0
Lactobacillus crispatus (SP365) 1.0 1.0 1.0 1.0 12.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Fretibacterium sp. HMT360 (SP113) 1.0 1.0 1.0 1.0 7.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Lactobacillus ultunensis (SP241) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 9.0 1.0 1.0 1.0 1.0 1.0
Colibacter massiliensis (SP409) 1.0 1.0 1.0 1.0 7.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Prevotella melaninogenica_nov_97.159% (SPN120) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 7.0 1.0 1.0 1.0 1.0 1.0
Treponema sp._ovinefootrot (SP389) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 15.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas sp. HMT277 (SP290) 1.0 1.0 1.0 1.0 13.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT336 (SP156) 1.0 1.0 1.0 1.0 11.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Selenomonas flueggei (SP253) 1.0 1.0 1.0 1.0 13.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Pseudoramibacter alactolyticus (SP399) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 14.0 1.0 1.0 1.0 1.0 1.0
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP382) 1.0 1.0 1.0 1.0 11.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT335 (SP240) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 11.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT315 (SP302) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 10.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT392 (SP73) 1.0 1.0 1.0 1.0 13.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT448 (SP231) 1.0 1.0 1.0 1.0 12.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Mycoplasma salivarium (SP356) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 2.00 8.0 1.0 1.0 1.0 1.0 1.0
Kingella sp. HMT932 (SP342) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 13.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT478 nov_97.897% (SPN133) 1.0 1.0 1.0 1.0 11.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Gemella haemolysans_nov_93.220% (SPN163) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 10.0 1.0 1.0 1.0 1.0 1.0
Prevotella multisaccharivorax (SP336) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 16.0 1.0 1.0 1.0 1.0 1.0
Veillonellaceae_[G-1] bacterium HMT132 (SP282) 1.0 1.0 1.0 1.0 10.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT171 (SP144) 1.0 1.0 1.0 1.0 15.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_sppn2_2_nov_97.217% (SPPN2) 1.0 1.0 1.0 1.0 15.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT338 (SP338) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 2.00 22.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT347 (SP206) 1.0 1.0 1.0 1.0 23.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Actinomyces dentalis (SP217) 1.0 1.0 1.0 1.0 16.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP125) 1.0 1.0 1.0 1.0 49.0 1.0 1.00 1.0 1.00 189.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp._Oral_Taxon_E83 (SP303) 1.0 1.0 1.0 1.0 28.0 1.0 1.00 1.0 1.00 9.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp._Oral_Taxon_180 (SP66) 1.0 1.0 1.0 1.0 53.0 1.0 1.00 1.0 23.00 124.0 1.0 1.0 1.0 1.0 1.0
Ruminococcaceae_[G-1] bacterium HMT075 (SP347) 1.0 1.0 1.0 1.0 23.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Dialister invisus (SP145) 1.0 1.0 1.0 7.0 17.0 1.0 1.00 1.0 1.00 14.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum_ss_nucleatum (SP168) 1.0 1.0 1.0 1.0 17.0 1.0 1.00 1.0 1.00 28.0 1.0 1.0 1.0 1.0 1.0
Peptostreptococcus stomatis (SP64) 1.0 1.0 1.0 1.0 18.0 1.0 1.00 1.0 12.25 89.0 1.0 1.0 1.0 1.0 1.0
Streptococcus multispecies_spp15_2 (SPP15) 1.0 1.0 1.0 1.0 24.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus parasanguinis_I_nov_95.522% (SPN225) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 25.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia shahii (SP161) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 18.0 1.0 1.0 1.0 1.0 1.0
Absconditabacteria_(SR1)_[G-1] bacterium HMT874 (SP353) 1.0 1.0 1.0 1.0 18.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Prevotella histicola (SP101) 1.0 1.0 1.0 29.0 300.0 1.0 1.00 1.0 1.00 10.0 1.0 1.0 1.0 1.0 1.0
Parvimonas sp._Oral_Taxon_110 (SP213) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 21.0 1.0 1.0 1.0 1.0 1.0
Streptococcus parasanguinis_clade_411 (SP327) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 19.0 1.0 1.0 1.0 1.0 1.0
Prevotella scopos (SP379) 1.0 1.0 1.0 1.0 20.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus gordonii_nov_96.679% (SPN1) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 14.75 21.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP32) 1.0 1.0 1.0 1.0 13.0 1.0 1.00 1.0 1.00 26.0 1.0 1.0 1.0 1.0 1.0
Treponema lecithinolyticum (SP274) 1.0 1.0 1.0 1.0 14.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Prevotella marshii (SP262) 1.0 1.0 1.0 1.0 3.0 1.0 1.00 1.0 1.00 17.0 1.0 1.0 1.0 1.0 1.0
Actinomyces meyeri (SP441) 1.0 1.0 1.0 1.0 81.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium durum (SP46) 1.0 1.0 1.0 33.0 97.0 1.0 1.00 1.0 31.50 75.0 1.0 1.0 1.0 1.0 1.0
Streptococcus salivarius (SP47) 1.0 247.0 404.0 1524.0 1679.0 1.0 63.25 164.0 423.25 1306.0 3186.0 3186.0 3186.0 3186.0 3186.0
Stomatobaculum sp. HMT097 (SP51) 1.0 1.0 1.0 21.0 64.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus vestibularis (SP48) 1.0 1.0 1.0 376.0 12783.0 1.0 1.00 74.0 1362.00 4436.0 4529.0 4529.0 4529.0 4529.0 4529.0
Abiotrophia defectiva (SP50) 1.0 1.0 1.0 1.0 71.0 1.0 1.00 1.0 11.25 76.0 1.0 1.0 1.0 1.0 1.0
Prevotella salivae (SP49) 1.0 1.0 40.0 149.0 502.0 1.0 1.00 30.0 57.00 225.0 1.0 1.0 1.0 1.0 1.0
Veillonella atypica (SP5) 1.0 77.0 175.0 268.0 2525.0 1.0 144.25 223.0 620.00 2287.0 108.0 108.0 108.0 108.0 108.0
Streptococcus parasanguinis_I (SP45) 1.0 1.0 1.0 34.0 471.0 1.0 1.00 42.0 226.50 12239.0 1.0 1.0 1.0 1.0 1.0
Actinomyces viscosus (SP41) 1.0 1.0 1.0 69.0 204.0 1.0 1.00 10.5 33.50 83.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT175 (SP44) 1.0 1.0 1.0 38.0 95.0 1.0 1.00 1.0 1.00 31.0 1.0 1.0 1.0 1.0 1.0
Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP4) 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 1.00 11.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT149 (SP317) 1.0 1.0 1.0 1.0 66.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus pneumoniae (SP36) 1.0 1.0 1.0 1.0 626.0 1.0 1.00 1.0 1.00 74.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp._str._M334 (SP37) 1.0 1.0 1.0 1.0 159.0 1.0 1.00 1.0 1.00 9918.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp._str._C300 (SP38) 1.0 52.0 192.0 1397.0 25316.0 1.0 274.75 700.0 1271.75 4255.0 25.0 25.0 25.0 25.0 25.0
Neisseria elongata (SP355) 1.0 1.0 1.0 52.0 81.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Actinomyces naeslundii (SP33) 1.0 1.0 1.0 18.0 83.0 1.0 1.00 1.0 1.00 18.0 1.0 1.0 1.0 1.0 1.0
Haemophilus sputorum (SP40) 1.0 1.0 1.0 1.0 5101.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus infantis (SP34) 1.0 1.0 10.0 118.0 415.0 1.0 1.00 1.0 16.50 1209.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT847 (SP351) 1.0 1.0 1.0 1.0 106.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Bifidobacterium dentium (SP35) 1.0 1.0 1.0 1.0 37.0 1.0 1.00 1.0 1.00 18.0 29.0 29.0 29.0 29.0 29.0
Butyrivibrio sp. HMT455 (SP326) 1.0 1.0 1.0 1.0 36.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT472 (SP413) 1.0 1.0 1.0 1.0 57.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Haemophilus parainfluenzae (SP42) 1.0 359.0 530.0 1089.0 7071.0 1.0 33.50 125.5 730.00 2543.0 1.0 1.0 1.0 1.0 1.0
Megasphaera micronuciformis (SP43) 1.0 1.0 16.0 27.0 216.0 1.0 1.00 1.0 22.75 205.0 1.0 1.0 1.0 1.0 1.0
Peptidiphaga sp. HMT183 (SP357) 1.0 1.0 1.0 1.0 15.0 1.0 1.00 1.0 1.00 10.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT306 (SP68) 1.0 1.0 1.0 1.0 140.0 1.0 1.00 1.0 2.25 486.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT309 (SP53) 1.0 1.0 1.0 1.0 163.0 1.0 1.00 1.0 1.00 11.0 1.0 1.0 1.0 1.0 1.0
Granulicatella elegans (SP91) 1.0 1.0 1.0 1.0 47.0 1.0 1.00 1.0 8.25 36.0 1.0 1.0 1.0 1.0 1.0
Treponema sp. HMT237 (SP93) 1.0 1.0 1.0 1.0 16.0 1.0 1.00 1.0 2.75 116.0 1.0 1.0 1.0 1.0 1.0
Streptococcus australis (SP94) 1.0 1.0 1.0 30.0 84.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT169 (SP95) 1.0 1.0 1.0 1.0 2134.0 1.0 1.00 1.0 16.25 120.0 1.0 1.0 1.0 1.0 1.0
Prevotella veroralis (SP96) 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Treponema sp. HMT231 (SP98) 1.0 1.0 1.0 10.0 15.0 1.0 1.00 1.0 1.00 8.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT314 (SP99) 1.0 1.0 1.0 1.0 14.0 1.0 1.00 1.0 1.00 7.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT175 nov_97.633% (SPN109) 1.0 1.0 1.0 64.0 256.0 1.0 1.00 1.0 32.75 185.0 1.0 1.0 1.0 1.0 1.0
Streptococcus parasanguinis_II_nov_97.373% (SPN113) 1.0 1.0 1.0 1.0 31.0 1.0 1.00 1.0 1.00 48.0 1.0 1.0 1.0 1.0 1.0
Campylobacter concisus_nov_97.000% (SPN173) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 45.0 1.0 1.0 1.0 1.0 1.0
Prevotella veroralis_nov_97.348% (SPN216) 1.0 1.0 1.0 10.0 74.0 1.0 1.00 3.0 17.25 82.0 1.0 1.0 1.0 1.0 1.0
Streptococcus lactarius_nov_97.868% (SPN325) 1.0 1.0 1.0 1.0 195.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT305 nov_94.477% (SPN371) 1.0 1.0 1.0 1.0 50.0 1.0 1.00 1.0 1.00 43.0 1.0 1.0 1.0 1.0 1.0
Actinomyces viscosus_nov_97.765% (SPN383) 1.0 1.0 1.0 1.0 262.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga gingivalis_nov_97.665% (SPN392) 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus australis_nov_97.373% (SPN466) 1.0 1.0 1.0 1.0 104.0 1.0 1.00 1.0 10.00 44.0 1.0 1.0 1.0 1.0 1.0
Cutibacterium acnes (SPP11) 1.0 1.0 14.0 20.0 71.0 1.0 1.00 1.0 1.00 129.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga multispecies_spp12_2 (SPP12) 1.0 1.0 1.0 1.0 25.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Eubacterium_[XIVa][G-1] saburreum (SPP16) 1.0 1.0 1.0 1.0 67.0 1.0 1.00 1.0 1.00 215.0 1.0 1.0 1.0 1.0 1.0
Streptococcus multispecies_spp26_2 (SPP26) 1.0 1.0 293.0 534.0 1819.0 1.0 148.75 391.5 592.25 1460.0 1.0 1.0 1.0 1.0 1.0
Streptococcus multispecies_spp27_3 (SPP27) 1.0 1.0 1.0 577.0 1373.0 1.0 1.00 1.0 19.25 1331.0 1.0 1.0 1.0 1.0 1.0
Oribacterium multispecies_spp3_2 (SPP3) 1.0 1.0 1.0 36.0 87.0 1.0 1.00 1.0 1.00 59.0 1.0 1.0 1.0 1.0 1.0
Streptococcus multispecies_spp38_2 (SPP38) 1.0 1.0 199.0 743.0 2869.0 1.0 1.00 180.0 355.00 1118.0 9411.0 9411.0 9411.0 9411.0 9411.0
Granulicatella multispecies_spp42_2 (SPP42) 1.0 1.0 54.0 64.0 278.0 1.0 47.50 89.0 132.00 394.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_spp5_2 (SPP5) 1.0 1.0 1.0 1.0 72.0 1.0 1.00 1.0 27.50 50.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_spp6_2 (SPP6) 1.0 1.0 1.0 1.0 85.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus multispecies_spp7_2 (SPP7) 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium multispecies_spp9_2 (SPP9) 1.0 1.0 1.0 39.0 169.0 1.0 1.00 1.0 66.75 131.0 65.0 65.0 65.0 65.0 65.0
Granulicatella paradiacens (SP92) 1.0 145.0 170.0 187.0 322.0 1.0 25.75 66.5 329.25 1220.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia wadei (SP89) 1.0 1.0 1.0 65.0 106.0 1.0 1.00 1.0 13.00 60.0 58.0 58.0 58.0 58.0 58.0
Porphyromonas pasteri (SP56) 1.0 1.0 1.0 38.0 145.0 1.0 1.00 1.0 9.75 5400.0 1.0 1.0 1.0 1.0 1.0
Prevotella dentalis (SP88) 1.0 1.0 1.0 1.0 30.0 1.0 1.00 1.0 8.25 45.0 1.0 1.0 1.0 1.0 1.0
Streptococcus oralis (SP57) 1.0 53.0 166.0 532.0 2788.0 1.0 1.00 17.5 56.25 589.0 9.0 9.0 9.0 9.0 9.0
Neisseria flavescens|subflava (SP58) 1.0 6.0 194.0 353.0 2483.0 1.0 1.00 1.0 19.50 499.0 1.0 1.0 1.0 1.0 1.0
Aggregatibacter sp. HMT458 (SP59) 1.0 1.0 1.0 1.0 67.0 1.0 1.00 1.0 1.00 19.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum_ss_polymorphum (SP6) 1.0 1.0 48.0 115.0 151.0 1.0 1.00 21.0 107.00 5004.0 1.0 1.0 1.0 1.0 1.0
Cardiobacterium hominis (SP60) 1.0 1.0 1.0 1.0 79.0 1.0 1.00 1.0 1.00 25.0 1.0 1.0 1.0 1.0 1.0
Rothia mucilaginosa (SP61) 69.0 175.0 190.0 433.0 1836.0 1.0 166.25 484.5 1001.25 2140.0 1.0 1.0 1.0 1.0 1.0
Gemella haemolysans (SP62) 1.0 240.0 255.0 382.0 1802.0 1.0 70.25 364.0 1151.50 2432.0 9.0 9.0 9.0 9.0 9.0
Campylobacter showae (SP63) 1.0 1.0 9.0 43.0 68.0 1.0 1.00 1.0 9.50 273.0 1.0 1.0 1.0 1.0 1.0
Prevotella pallens (SP65) 1.0 1.0 8.0 30.0 705.0 1.0 1.00 1.0 23.50 899.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium periodonticum (SP67) 1.0 1.0 97.0 285.0 1629.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus lactarius (SP308) 1.0 1.0 1.0 1.0 133.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Granulicatella adiacens (SP69) 1.0 1.0 1.0 24.0 48.0 1.0 1.00 1.0 20.00 103.0 1.0 1.0 1.0 1.0 1.0
Streptococcus intermedius (SP7) 1.0 1.0 1.0 7.0 50.0 1.0 1.00 1.0 13.00 157.0 144.0 144.0 144.0 144.0 144.0
Neisseria sicca (SP70) 1.0 1.0 85.0 369.0 4357.0 1.0 1.00 54.5 406.00 1957.0 1.0 1.0 1.0 1.0 1.0
Parvimonas micra (SP72) 1.0 1.0 18.0 54.0 99.0 1.0 1.00 18.5 58.75 344.0 1.0 1.0 1.0 1.0 1.0
Streptococcus parasanguinis_II (SP74) 1.0 106.0 139.0 410.0 603.0 1.0 1.00 99.0 272.75 807.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT221 (SP75) 1.0 1.0 1.0 1.0 321.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga gingivalis (SP76) 1.0 1.0 14.0 41.0 166.0 1.0 1.00 4.0 22.50 92.0 1.0 1.0 1.0 1.0 1.0
Actinomyces odontolyticus (SP77) 1.0 61.0 132.0 158.0 178.0 1.0 13.75 85.5 206.50 691.0 1.0 1.0 1.0 1.0 1.0
Ruminococcaceae_[G-2] bacterium HMT085 (SP79) 1.0 1.0 1.0 1.0 43.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Actinomyces graevenitzii (SP8) 1.0 1.0 1.0 1.0 49.0 1.0 1.00 1.0 1.00 28.0 1.0 1.0 1.0 1.0 1.0
Prevotella jejuni (SP81) 1.0 1.0 16.0 212.0 506.0 1.0 1.00 69.5 623.50 870.0 1.0 1.0 1.0 1.0 1.0
Neisseria mucosa (SP82) 1.0 1.0 1.0 386.0 4848.0 1.0 1.00 1.0 638.50 3315.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT136 (SP84) 1.0 1.0 1.0 1.0 80.0 1.0 1.00 1.0 1.00 15.0 1.0 1.0 1.0 1.0 1.0
Haemophilus haemolyticus (SP85) 1.0 1.0 1.0 203.0 489.0 1.0 1.00 42.0 186.50 3861.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT498 (SP86) 1.0 1.0 1.0 1.0 68.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Alloprevotella sp. HMT473 (SP87) 1.0 1.0 1.0 1.0 18.0 1.0 1.00 1.0 1.00 253.0 1.0 1.0 1.0 1.0 1.0
Tannerella sp. HMT286 (SP31) 1.0 1.0 1.0 1.0 33.0 1.0 1.00 1.0 1.00 3.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas endodontalis (SP10) 1.0 1.0 33.0 50.0 148.0 1.0 1.00 5.0 53.25 223.0 16.0 16.0 16.0 16.0 16.0
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP306) 1.0 1.0 1.0 1.0 62.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Filifactor alocis (SP158) 1.0 1.0 1.0 1.0 19.0 1.0 1.00 1.0 5.00 36.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum_ss_animalis (SP14) 1.0 1.0 1.0 31.0 135.0 1.0 1.00 1.0 1.00 112.0 1.0 1.0 1.0 1.0 1.0
Neisseria sp._Oral_Taxon_14 (SP141) 1.0 1.0 1.0 1.0 1432.0 1.0 1.00 1.0 21.00 123.0 1.0 1.0 1.0 1.0 1.0
Atopobium parvulum (SP143) 1.0 1.0 21.0 46.0 301.0 1.0 1.00 17.5 60.00 301.0 1.0 1.0 1.0 1.0 1.0
Prevotella nanceiensis (SP147) 1.0 1.0 1.0 9.0 30.0 1.0 1.00 1.0 26.50 430.0 1.0 1.0 1.0 1.0 1.0
Bacillus megaterium (SP148) 1.0 1.0 1.0 1.0 92.0 1.0 1.00 1.0 2.75 15.0 1.0 1.0 1.0 1.0 1.0
Campylobacter concisus (SP15) 1.0 40.0 72.0 140.0 489.0 1.0 7.75 30.5 83.25 147.0 1.0 1.0 1.0 1.0 1.0
Ottowia sp. HMT894 (SP150) 1.0 1.0 1.0 1.0 45.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium sp._Oral_Taxon_A16 (SP151) 1.0 1.0 1.0 1.0 75.0 1.0 1.00 1.0 1.00 44.0 1.0 1.0 1.0 1.0 1.0
Mogibacterium vescum (SP152) 1.0 1.0 1.0 21.0 53.0 1.0 1.00 1.0 12.50 69.0 1.0 1.0 1.0 1.0 1.0
Propionibacterium acnes (SP153) 1.0 1.0 42.0 131.0 160.0 1.0 1.00 1.0 1.00 530.0 1.0 1.0 1.0 1.0 1.0
Anaeroglobus geminatus (SP154) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 2.75 29.0 1.0 1.0 1.0 1.0 1.0
Prevotella maculosa (SP155) 1.0 1.0 1.0 6.0 14.0 1.0 1.00 1.0 1.00 13.0 1.0 1.0 1.0 1.0 1.0
Tannerella forsythia (SP157) 1.0 1.0 1.0 8.0 20.0 1.0 1.00 1.0 7.75 13.0 12.0 12.0 12.0 12.0 12.0
Capnocytophaga leadbetteri (SP16) 1.0 1.0 18.0 31.0 51.0 1.0 1.00 1.0 13.00 53.0 1.0 1.0 1.0 1.0 1.0
Lautropia mirabilis (SP30) 1.0 1.0 61.0 169.0 1004.0 1.0 1.00 15.5 94.75 634.0 1.0 1.0 1.0 1.0 1.0
Eikenella corrodens (SP160) 1.0 1.0 1.0 16.0 52.0 1.0 1.00 1.0 9.25 41.0 1.0 1.0 1.0 1.0 1.0
Schaalia lingnae_[Not_Validly_Published] (SP162) 1.0 1.0 1.0 42.0 53.0 1.0 1.00 10.5 126.75 498.0 1.0 1.0 1.0 1.0 1.0
Gemella sanguinis (SP163) 1.0 1.0 6.0 74.0 83.0 1.0 1.00 1.0 3.75 64.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia goodfellowii (SP164) 1.0 1.0 1.0 1.0 11.0 1.0 1.00 1.0 1.00 45.0 1.0 1.0 1.0 1.0 1.0
Oribacterium sp._Oral_Taxon_78 (SP165) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 27.0 1.0 1.0 1.0 1.0 1.0
Treponema socranskii (SP166) 1.0 1.0 1.0 1.0 5.0 1.0 1.00 1.0 6.50 57.0 1.0 1.0 1.0 1.0 1.0
Campylobacter gracilis (SP167) 1.0 1.0 1.0 1.0 53.0 1.0 1.00 1.0 6.25 119.0 1.0 1.0 1.0 1.0 1.0
Prevotella intermedia (SP169) 1.0 1.0 1.0 36.0 152.0 1.0 1.00 1.0 1.00 10.0 1.0 1.0 1.0 1.0 1.0
Pseudopropionibacterium propionicum (SP17) 1.0 1.0 1.0 1.0 36.0 1.0 1.00 1.0 1.00 18.0 1.0 1.0 1.0 1.0 1.0
Treponema denticola (SP171) 1.0 1.0 1.0 1.0 7.0 1.0 1.00 1.0 1.00 21.0 1.0 1.0 1.0 1.0 1.0
Oribacterium sinus (SP172) 1.0 1.0 1.0 1.0 149.0 1.0 1.00 1.0 90.50 173.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp._str._ChDCB197 (SP173) 1.0 1.0 1.0 60.0 505.0 1.0 1.00 1.0 1.00 153.0 1.0 1.0 1.0 1.0 1.0
Alloprevotella sp. HMT308 (SP174) 1.0 1.0 1.0 37.0 137.0 1.0 1.00 13.0 88.25 148.0 1.0 1.0 1.0 1.0 1.0
Selenomonas noxia (SP139) 1.0 1.0 1.0 19.0 43.0 1.0 1.00 1.0 1.75 55.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT417 (SP138) 1.0 1.0 1.0 1.0 144.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Prevotella loescheii (SP136) 1.0 1.0 1.0 1.0 18.0 1.0 1.00 1.0 19.50 96.0 1.0 1.0 1.0 1.0 1.0
Prevotella oulorum (SP135) 1.0 1.0 1.0 18.0 34.0 1.0 1.00 1.0 1.00 71.0 19.0 19.0 19.0 19.0 19.0
Haemophilus sp. HMT036 (SP102) 1.0 1.0 1.0 182.0 382.0 1.0 1.00 12.5 133.50 332.0 1.0 1.0 1.0 1.0 1.0
Streptococcus mutans (SP103) 1.0 1.0 1.0 4.0 136.0 1.0 1.00 1.0 5.75 28.0 241.0 241.0 241.0 241.0 241.0
Prevotella sp. HMT317 (SP104) 1.0 1.0 1.0 12.0 104.0 1.0 1.00 1.0 1.00 62.0 1.0 1.0 1.0 1.0 1.0
Rothia aeria (SP106) 1.0 1.0 1.0 100.0 170.0 1.0 1.00 13.0 39.75 99.0 1.0 1.0 1.0 1.0 1.0
Fretibacterium fastidiosum (SP107) 1.0 1.0 1.0 1.0 12.0 1.0 1.00 1.0 2.00 62.0 1.0 1.0 1.0 1.0 1.0
Prevotella denticola (SP108) 1.0 1.0 1.0 12.0 99.0 1.0 1.00 4.0 32.25 208.0 29.0 29.0 29.0 29.0 29.0
Staphylococcus epidermidis (SP11) 1.0 1.0 1.0 14.0 28.0 1.0 1.00 1.0 9.50 51.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT305 (SP112) 1.0 1.0 1.0 1.0 31.0 1.0 1.00 1.0 6.75 36.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp._Oral_Taxon_71 (SP114) 1.0 1.0 1.0 1.0 56.0 1.0 1.00 1.0 5.25 55.0 1.0 1.0 1.0 1.0 1.0
Corynebacterium matruchotii (SP115) 1.0 1.0 1.0 18.0 128.0 1.0 1.00 1.0 1.00 13.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-5] bacterium HMT356 (SP117) 1.0 1.0 1.0 1.0 8.0 1.0 1.00 1.0 1.00 44.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga ochracea (SP118) 1.0 1.0 1.0 22.0 66.0 1.0 1.00 1.0 1.00 29.0 39.0 39.0 39.0 39.0 39.0
Selenomonas sp. HMT478 (SP119) 1.0 1.0 1.0 1.0 23.0 1.0 1.00 1.0 1.00 9.0 1.0 1.0 1.0 1.0 1.0
Selenomonas artemidis (SP120) 1.0 1.0 1.0 1.0 26.0 1.0 1.00 1.0 1.75 7.0 8.0 8.0 8.0 8.0 8.0
Stomatobaculum longum (SP121) 1.0 1.0 1.0 24.0 97.0 1.0 1.00 1.0 26.00 96.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas gingivalis (SP123) 1.0 1.0 1.0 1.0 87.0 1.0 1.00 1.0 8.75 70.0 40.0 40.0 40.0 40.0 40.0
Streptococcus infantis_clade_431 (SP124) 1.0 1.0 1.0 24.0 184.0 1.0 1.00 1.0 1.00 121.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-3] bacterium HMT351 (SP126) 1.0 1.0 1.0 1.0 71.0 1.0 1.00 1.0 2.50 20.0 1.0 1.0 1.0 1.0 1.0
Kingella oralis (SP127) 1.0 7.0 20.0 76.0 309.0 1.0 1.00 10.0 60.50 129.0 1.0 1.0 1.0 1.0 1.0
Alloprevotella tannerae (SP128) 1.0 1.0 1.0 22.0 56.0 1.0 1.00 2.5 17.25 170.0 1.0 1.0 1.0 1.0 1.0
Streptococcus thermophilus (SP129) 1.0 1.0 1.0 1.0 54.0 1.0 1.00 1.0 1.00 49.0 1.0 1.0 1.0 1.0 1.0
Fusobacterium nucleatum (SP13) 1.0 26.0 77.0 145.0 274.0 1.0 10.75 156.0 402.50 5523.0 31.0 31.0 31.0 31.0 31.0
Schaalia sp. HMT180 (SP130) 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 1.00 44.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT380 (SP131) 1.0 1.0 1.0 1.0 49.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sp. HMT326 (SP132) 1.0 1.0 11.0 47.0 73.0 1.0 1.00 1.0 36.50 105.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sputigena (SP133) 1.0 1.0 1.0 26.0 59.0 1.0 1.00 4.0 13.25 30.0 38.0 38.0 38.0 38.0 38.0
Bergeyella sp. HMT931 (SP134) 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 1.00 50.0 1.0 1.0 1.0 1.0 1.0
Propionibacterium acidifaciens (SP175) 1.0 1.0 1.0 1.0 52.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Solobacterium moorei (SP176) 1.0 1.0 1.0 9.0 75.0 1.0 1.00 1.0 27.75 112.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga sputigena (SP177) 1.0 1.0 18.0 97.0 356.0 1.0 1.00 1.0 67.50 564.0 1.0 1.0 1.0 1.0 1.0
Prevotella oralis (SP238) 1.0 1.0 1.0 2.0 27.0 1.0 1.00 1.0 1.00 42.0 1.0 1.0 1.0 1.0 1.0
Kingella denitrificans (SP243) 1.0 1.0 1.0 1.0 103.0 1.0 1.00 1.0 1.00 103.0 1.0 1.0 1.0 1.0 1.0
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP244) 1.0 1.0 1.0 9.0 26.0 1.0 1.00 1.0 14.25 63.0 1.0 1.0 1.0 1.0 1.0
Prevotella pleuritidis (SP248) 1.0 1.0 1.0 1.0 51.0 1.0 1.00 1.0 16.25 151.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp. HMT170 (SP249) 1.0 1.0 1.0 1.0 31.0 1.0 1.00 1.0 1.00 62.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp. HMT074 (SP25) 1.0 1.0 1.0 1.0 225.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Prevotella sp. HMT300 (SP250) 1.0 1.0 1.0 1.0 36.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp._AF189244.1 (SP254) 1.0 1.0 1.0 7.0 117.0 1.0 1.00 1.0 4.00 37.0 1.0 1.0 1.0 1.0 1.0
Haemophilus influenzae (SP255) 1.0 1.0 1.0 1.0 40.0 1.0 1.00 1.0 1.00 353.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia buccalis (SP26) 1.0 1.0 1.0 1.0 373.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas catoniae (SP260) 1.0 1.0 1.0 1.0 40.0 1.0 1.00 1.0 1.00 8.0 1.0 1.0 1.0 1.0 1.0
Mogibacterium timidum (SP263) 1.0 1.0 1.0 1.0 11.0 1.0 1.00 1.0 1.00 16.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT348 (SP267) 1.0 1.0 1.0 1.0 40.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Lachnoanaerobaculum orale (SP27) 1.0 1.0 1.0 93.0 139.0 1.0 1.00 1.0 6.00 174.0 1.0 1.0 1.0 1.0 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP277) 1.0 1.0 1.0 1.0 111.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus cristatus (SP28) 1.0 1.0 1.0 35.0 156.0 1.0 1.00 1.0 9.75 45.0 1.0 1.0 1.0 1.0 1.0
Alloscardovia urinalis (SP280) 1.0 1.0 1.0 14.0 73.0 1.0 1.00 1.0 6.00 33.0 1.0 1.0 1.0 1.0 1.0
Haemophilus aegyptius (SP281) 1.0 1.0 1.0 1.0 9.0 1.0 1.00 1.0 1.00 183.0 1.0 1.0 1.0 1.0 1.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP284) 1.0 1.0 1.0 1.0 35.0 1.0 1.00 1.0 1.00 15.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp. HMT057 (SP100) 1.0 1.0 1.0 1.0 8.0 1.0 1.00 1.0 1.00 126.0 1.0 1.0 1.0 1.0 1.0
Streptococcus gordonii (SP29) 1.0 1.0 1.0 109.0 156.0 1.0 1.00 1.0 16.75 170.0 1.0 1.0 1.0 1.0 1.0
Actinomyces sp._Oral_Taxon_848 (SP291) 1.0 1.0 1.0 1.0 33.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT223 (SP293) 1.0 1.0 1.0 1.0 139.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Peptococcus sp._Oral_Taxon_167 (SP294) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 50.0 1.0 1.0 1.0 1.0 1.0
Neisseria sp. HMT499 (SP295) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 36.0 1.0 1.0 1.0 1.0 1.0
Selenomonas sp. HMT892 (SP297) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 81.0 1.0 1.0 1.0 1.0 1.0
Bifidobacterium longum (SP299) 1.0 1.0 1.0 1.0 75.0 1.0 1.00 1.0 6.50 35.0 1.0 1.0 1.0 1.0 1.0
Veillonella parvula (SP3) 1.0 578.0 765.0 949.0 3060.0 28.0 332.25 930.5 3138.00 5595.0 1185.0 1185.0 1185.0 1185.0 1185.0
Streptococcus mitis (SP24) 9.0 305.0 587.0 2544.0 16620.0 1.0 424.00 2525.5 7851.50 9051.0 1.0 1.0 1.0 1.0 1.0
Haemophilus sp. HMT908 (SP236) 1.0 1.0 1.0 1.0 10.0 1.0 1.00 1.0 81.75 2867.0 1.0 1.0 1.0 1.0 1.0
Capnocytophaga granulosa (SP178) 1.0 1.0 1.0 1.0 114.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Cardiobacterium valvarum (SP233) 1.0 1.0 1.0 7.0 36.0 1.0 1.00 1.0 1.00 15.0 1.0 1.0 1.0 1.0 1.0
Prevotella oris (SP18) 1.0 25.0 92.0 101.0 174.0 1.0 16.00 66.5 116.00 665.0 115.0 115.0 115.0 115.0 115.0
Gemella moribillum (SP180) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 103.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT219 (SP183) 1.0 1.0 1.0 1.0 55.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Enterobacter cloacae (SP187) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 42.0 1.0 1.0 1.0 1.0 1.0
Porphyromonas sp. HMT278 (SP188) 1.0 1.0 1.0 1.0 56.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Neisseria cinerea (SP189) 1.0 1.0 1.0 1.0 1.0 1.0 1.00 1.0 1.00 72.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT215 (SP19) 1.0 1.0 1.0 17.0 807.0 1.0 1.00 1.0 14.25 2097.0 1.0 1.0 1.0 1.0 1.0
Alloprevotella rava (SP191) 1.0 1.0 1.0 14.0 51.0 1.0 1.00 1.0 1.00 15.0 1.0 1.0 1.0 1.0 1.0
Actinomyces oris (SP193) 1.0 1.0 1.0 17.0 168.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Rothia dentocariosa (SP195) 1.0 113.0 315.0 413.0 2091.0 1.0 117.00 326.0 619.25 1212.0 32.0 32.0 32.0 32.0 32.0
Veillonellaceae_[G-1] bacterium HMT155 (SP196) 1.0 1.0 1.0 1.0 25.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia sp. HMT212 (SP197) 1.0 1.0 1.0 20.0 58.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus constellatus (SP2) 1.0 1.0 1.0 9.0 70.0 1.0 1.00 1.0 2.50 545.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sanguinis (SP20) 1.0 73.0 335.0 1458.0 3916.0 1.0 9.25 233.5 470.25 686.0 1.0 1.0 1.0 1.0 1.0
Prevotella baroniae (SP202) 1.0 1.0 1.0 13.0 27.0 1.0 1.00 1.0 1.00 48.0 1.0 1.0 1.0 1.0 1.0
Selenomonas infelix (SP203) 1.0 1.0 1.0 1.0 26.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp. HMT066 (SP207) 1.0 1.0 43.0 80.0 358.0 1.0 1.00 5.0 16.50 64.0 1.0 1.0 1.0 1.0 1.0
Atopobium rimae (SP21) 1.0 1.0 1.0 1.0 13.0 1.0 1.00 2.5 9.00 15.0 1.0 1.0 1.0 1.0 1.0
Catonella morbi (SP210) 1.0 1.0 18.0 36.0 130.0 1.0 1.00 7.5 33.00 112.0 1.0 1.0 1.0 1.0 1.0
Streptococcus anginosus (SP212) 1.0 1.0 6.0 53.0 112.0 1.0 1.00 3.5 14.00 129.0 69.0 69.0 69.0 69.0 69.0
Aggregatibacter segnis (SP216) 1.0 1.0 1.0 1.0 49.0 1.0 1.00 1.0 1.00 120.0 1.0 1.0 1.0 1.0 1.0
Gemella morbillorum (SP218) 1.0 1.0 1.0 1.0 5.0 1.0 1.00 1.0 28.00 71.0 1.0 1.0 1.0 1.0 1.0
Prevotella melaninogenica (SP22) 1.0 70.0 230.0 757.0 4714.0 1.0 7.75 133.5 437.75 1468.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp. HMT064 (SP220) 1.0 1.0 105.0 178.0 959.0 1.0 1.00 1.0 127.50 394.0 1.0 1.0 1.0 1.0 1.0
Scardovia wiggsiae (SP224) 1.0 1.0 1.0 1.0 20.0 1.0 1.00 1.0 1.00 1.0 29.0 29.0 29.0 29.0 29.0
Veillonella sp. HMT780 (SP226) 1.0 1.0 1.0 1.0 29.0 1.0 1.00 1.0 24.75 163.0 1.0 1.0 1.0 1.0 1.0
Streptococcus sp. HMT061 (SP23) 1.0 1.0 1.0 6.0 35.0 1.0 1.00 1.0 1.00 1.0 1.0 1.0 1.0 1.0 1.0
Leptotrichia trevisanii (SP285) 1.0 1.0 1.0 1.0 59.0 1.0 1.00 1.0 1.00 21.0 1.0 1.0 1.0 1.0 1.0
Download table as TSV