QIIME 2

ANCOM Volcano Plot

ANCOM statistical results

W
Lautropia mirabilis (SP88) 39
Gemella haemolysans (SP135) 29
Streptococcus sanguinis (SP25) 18
Actinomyces sp. HMT175 (SP52) 3
Streptococcus parasanguinis_clade_411_nov_97.661% (SPN72) 3
Selenomonas infelix (SP113) 2
Prevotella oralis (SP27) 2
Prevotella sp. HMT317 (SP189) 2
Novosphingobium silvae (SP12) 2
Streptococcus sanguinis_nov_97.538% (SPN61) 2
Schaalia odontolyticus (SP68) 2
Catonella morbi (SP127) 2
Treponema denticola (SP3) 2
Capnocytophaga sp. HMT336 (SP144) 2
Treponema socranskii (SP97) 2
Peptostreptococcaceae_[XI][G-4] bacterium HMT103 (SP178) 1
Lancefieldella rimae (SP86) 1
Prevotella sp. HMT376 (SP205) 1
Peptoanaerobacter [Eubacterium] yurii (SP200) 1
Prevotella sp. HMT309 (SP80) 1
Alloprevotella tannerae (SP163) 1
Solobacterium moorei (SP173) 1
Actinomyces israelii (SP94) 1
Streptococcus chosunense (SP90) 1
Granulicatella elegans (SP175) 1
Fretibacterium fastidiosum (SP183) 1
Selenomonas sp. HMT137 (SP182) 1
Prevotella oris (SP71) 1
Dialister invisus (SP179) 1
Dialister micraerophilus (SP227) 1
Actinomycetospora lutea (SP224) 1
Haemophilus haemolyticus (SP225) 1
Gemella morbillorum (SP44) 1
Parvimonas micra (SP4) 1
Porphyromonas endodontalis (SP39) 1
Pseudoramibacter alactolyticus (SP54) 1
Capnocytophaga sp. HMT380 (SP35) 1
Johnsonella sp. HMT166 (SP58) 1
Actinomyces graevenitzii (SP60) 1
Cryptobacterium curtum (SP243) 1
Treponema sp. HMT231 (SP64) 1
Prevotella jejuni (SP236) 1
Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP67) 1
Prevotella sp. HMT443 (SP229) 1
Treponema maltophilum (SP228) 1
Amaricoccus kaplicensis_nov_95.736% (SPN30) 1
Tannerella forsythia (SP226) 1
Actinomyces sp. HMT175 nov_97.446% (SPN26) 1
Abiotrophia defectiva (SP49) 1
Actinomycetospora callitridis_nov_97.556% (SPN41) 1
Phocaeicola abscessus (SP107) 1
Prevotella loescheii (SP123) 1
Prevotella pallens (SP118) 1
Selenomonas artemidis_nov_97.126% (SPN46) 1
Selenomonas sp. HMT137 nov_97.710% (SPN82) 1
Porphyromonas gingivalis (SP115) 1
Bilophila wadsworthia (SP114) 1
Prevotella intermedia (SP112) 1
Streptococcus parasanguinis_clade_411_nov_97.864% (SPN43) 1
Streptococcus sanguinis_nov_97.723% (SPN42) 1
Filifactor alocis (SP126) 1
Selenomonas sp. HMT136 (SP139) 1
Arachnia propionica_nov_97.980% (SPN39) 1
Actinomyces johnsonii (SP125) 1
Arboricoccus pini_nov_88.720% (SPN35) 1
Peptostreptococcus stomatis (SP105) 1
Capnocytophaga ochracea (SP102) 1
Selenomonas sp. HMT137 nov_97.137% (SPN34) 1
Neisseria subflava (SP154) 1
Leptotrichia sp. HMT215 nov_97.500% (SPN5) 0
Acinetobacter johnsonii_nov_97.701% (SPN51) 0
Prevotella salivae (SP69) 0
Streptococcus sp. HMT061 (SP62) 0
Pseudomonas multispecies_spp7_2 (SPP7) 0
Streptococcus parasanguinis_clade_411 (SP5) 0
Porphyromonas pasteri (SP50) 0
Mogibacterium vescum (SP65) 0
Actinomyces sp. HMT170 (SP51) 0
Streptococcus salivarius_nov_97.373% (SPN49) 0
Streptococcus sp. HMT066 (SP63) 0
Agrobacterium tumefaciens (SP55) 0
Streptococcus gordonii_nov_97.020% (SPN94) 0
Streptococcus parasanguinis (SP56) 0
Leptotrichia sp. HMT215 (SP61) 0
Veillonella multispecies_spp10_2 (SPP10) 0
Streptococcus multispecies_spp11_2 (SPP11) 0
Dyadobacter multispecies_spp6_2 (SPP6) 0
Staphylococcus multispecies_spp5_3 (SPP5) 0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP6) 0
Prevotella melaninogenica (SP53) 0
Streptococcus multispecies_spp2_2 (SPP2) 0
Campylobacter showae (SP59) 0
Lachnoanaerobaculum multispecies_spp3_2 (SPP3) 0
Bergeyella sp. HMT322 (SP57) 0
Capnocytophaga gingivalis_nov_97.860% (SPN31) 0
Bifidobacterium dentium (SP73) 0
Streptococcus intermedius (SP7) 0
Chryseobacterium profundimaris (SP70) 0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP89) 0
Streptococcus oralis (SP91) 0
Capnocytophaga leadbetteri (SP47) 0
Abiotrophia defectiva_nov_96.468% (SPN38) 0
Cardiobacterium valvarum (SP92) 0
Streptococcus oralis_nov_97.740% (SPN37) 0
Prevotella histicola (SP93) 0
Kingella oralis_nov_97.826% (SPN36) 0
Stomatobaculum longum (SP95) 0
Fusobacterium periodonticum (SP96) 0
Micrococcus antarcticus (SP98) 0
Lichenibacterium minor_nov_94.541% (SPN33) 0
Micrococcus luteus (SP99) 0
Schaalia odontolytica_nov_97.683% (SPN106) 0
Arthrobacter pityocampae_nov_91.587% (SPN19) 0
Actinomyces oris_nov_96.852% (SPN40) 0
Acinetobacter lwoffii (SP87) 0
Streptococcus peroris (SP85) 0
Neisseria mucosa (SP77) 0
Actinomyces sp. HMT175 nov_95.577% (SPN47) 0
Schaalia sp. HMT172 (SP72) 0
Lichenibacterium minor_nov_95.815% (SPN32) 0
Agrobacterium fabacearum (SP74) 0
Bifidobacterium breve (SP75) 0
Ligilactobacillus salivarius (SP76) 0
Streptococcus parasanguinis_clade_411_nov_97.456% (SPN45) 0
Lachnoanaerobaculum orale (SP83) 0
Prevotella nanceiensis (SP78) 0
Streptococcus salivarius (SP79) 0
Ruminococcaceae_[G-1] bacterium HMT075 (SP8) 0
Ligilactobacillus salivarius_nov_95.273% (SPN44) 0
Streptococcus constellatus (SP81) 0
Capnocytophaga gingivalis (SP82) 0
Rothia dentocariosa (SP1) 0
Granulicatella adiacens (SP26) 0
Schaalia meyeri (SP46) 0
Arachnia propionica (SP14) 0
Selenomonas sputigena (SP143) 0
Actinomyces viscosus (SP145) 0
Oribacterium sinus (SP146) 0
Bergeyella sp. HMT900 (SP15) 0
Paracoccus yeei (SP150) 0
Kingella oralis (SP152) 0
Streptococcus sp. HMT057 (SP155) 0
Schaalia lingnae_[Not_Validly_Published] (SP156) 0
Rothia aeria (SP157) 0
Pantoea agglomerans (SP158) 0
Actinomyces sp. HMT169 (SP16) 0
Cardiobacterium hominis (SP161) 0
Alloscardovia omnicolens (SP162) 0
Pseudomonas cedrina (SP164) 0
Megasphaera micronuciformis (SP165) 0
Asticcacaulis excentricus (SP169) 0
Sphingobium yanoikuyae (SP17) 0
Staphylococcus warneri (SP171) 0
Actinomyces sp. HMT171 (SP174) 0
Streptococcus sp. HMT056 (SP142) 0
Lactobacillus crispatus (SP138) 0
Parascardovia denticolens (SP45) 0
Rothia aerolata (SP137) 0
Actinomyces naeslundii (SP101) 0
Leptotrichia sp. HMT212 (SP103) 0
Epilithonimonas hispanica (SP104) 0
Leptotrichia sp. HMT417 (SP106) 0
Streptococcus periodonticum (SP108) 0
Actinomyces oris (SP109) 0
Haemophilus parahaemolyticus (SP11) 0
Leptotrichia wadei (SP110) 0
Neisseria perflava (SP116) 0
Pseudomonas aeruginosa (SP117) 0
Streptococcus infantis_clade_431 (SP119) 0
Bifidobacterium scardovii (SP120) 0
Brevundimonas nasdae (SP122) 0
Porphyromonas catoniae (SP124) 0
Leptotrichia hongkongensis (SP128) 0
Microbacterium hydrothermale (SP129) 0
Schaalia sp. HMT180 (SP13) 0
Kocuria palustris (SP133) 0
Gemella sanguinis (SP136) 0
Micrococcus flavus (SP177) 0
Veillonella rogosae (SP18) 0
Bifidobacteriaceae_[G-2] bacterium HMT407 (SP180) 0
Streptococcus oralis_subsp._dentisani_clade_058 (SP181) 0
Bifidobacterium longum (SP234) 0
Paracoccus chinensis (SP235) 0
Pantoea allii (SP237) 0
Prevotella denticola (SP238) 0
Lancefieldella parvula (SP24) 0
Capnocytophaga sputigena (SP100) 0
Campylobacter gracilis (SP28) 0
Moraxella osloensis (SP29) 0
Rothia mucilaginosa (SP30) 0
Streptococcus sp. HMT074 (SP31) 0
Schaalia odontolytica (SP32) 0
Lactobacillus ultunensis (SP33) 0
Neisseria sicca (SP34) 0
Streptococcus anginosus (SP36) 0
Acinetobacter johnsonii (SP37) 0
Veillonella atypica (SP38) 0
Streptococcus mitis (SP40) 0
Campylobacter concisus (SP41) 0
Streptococcus sp. HMT064 (SP42) 0
Prevotella oulorum (SP233) 0
Eikenella corrodens (SP23) 0
Selenomonas flueggei (SP223) 0
Pseudomonas fluorescens (SP199) 0
Leptotrichia sp. HMT221 (SP185) 0
Selenomonas artemidis (SP187) 0
Oribacterium sp. HMT078 (SP188) 0
Haemophilus parainfluenzae (SP19) 0
Acidovorax temperans (SP192) 0
Paraburkholderia fungorum (SP193) 0
Corynebacterium tuberculostearicum (SP194) 0
Streptococcus mutans (SP198) 0
Streptococcus vestibularis (SP2) 0
Fusobacterium nucleatum (SP22) 0
Streptococcus gordonii (SP20) 0
Staphylococcus capitis (SP203) 0
Romboutsia timonensis (SP204) 0
Peptidiphaga sp. HMT183 (SP208) 0
Olsenella uli (SP209) 0
Veillonella parvula (SP21) 0
Leptothrix sp. HMT025 (SP210) 0
Cutibacterium acnes (SP213) 0
Streptococcus multispecies_spp8_2 (SPP8) 0
Download table as TSV

Percentile abundances of features by group

Percentile 0.0 25.0 50.0 75.0 100.0 0.0 25.0 50.0 75.0 100.0
Group Prosthesis < 1 year Prosthesis < 1 year Prosthesis < 1 year Prosthesis < 1 year Prosthesis < 1 year Prosthesis > 1 year Prosthesis > 1 year Prosthesis > 1 year Prosthesis > 1 year Prosthesis > 1 year
Lautropia mirabilis (SP88) 1.0 1.00 1.0 296.75 2034.0 1.0 1.00 1.0 1.00 193.0
Gemella haemolysans (SP135) 1.0 22.75 49.0 128.50 465.0 1.0 1.00 1.0 20.50 591.0
Streptococcus sanguinis (SP25) 1.0 1.00 466.5 1228.50 8487.0 1.0 1.00 1.0 1.00 3383.0
Actinomyces sp. HMT175 (SP52) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 9549.0
Streptococcus parasanguinis_clade_411_nov_97.661% (SPN72) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 165.0
Selenomonas infelix (SP113) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 102.0
Prevotella oralis (SP27) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 185.0
Prevotella sp. HMT317 (SP189) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 606.0
Novosphingobium silvae (SP12) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 573.0
Streptococcus sanguinis_nov_97.538% (SPN61) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 490.0
Schaalia odontolyticus (SP68) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 223.0
Catonella morbi (SP127) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 199.0
Treponema denticola (SP3) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 191.0
Capnocytophaga sp. HMT336 (SP144) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 53.0
Treponema socranskii (SP97) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 438.0
Peptostreptococcaceae_[XI][G-4] bacterium HMT103 (SP178) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 343.0
Lancefieldella rimae (SP86) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 98.0
Prevotella sp. HMT376 (SP205) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 70.0
Peptoanaerobacter [Eubacterium] yurii (SP200) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 428.0
Prevotella sp. HMT309 (SP80) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 206.0
Alloprevotella tannerae (SP163) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 249.0
Solobacterium moorei (SP173) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 784.0
Actinomyces israelii (SP94) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 1089.0
Streptococcus chosunense (SP90) 1.0 1.00 1.0 1.00 127.0 1.0 1.00 1.0 1.00 582.0
Granulicatella elegans (SP175) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 87.0
Fretibacterium fastidiosum (SP183) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 491.0
Selenomonas sp. HMT137 (SP182) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 64.0
Prevotella oris (SP71) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 603.0
Dialister invisus (SP179) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 67.0
Dialister micraerophilus (SP227) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 74.0
Actinomycetospora lutea (SP224) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 124.0
Haemophilus haemolyticus (SP225) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 106.0
Gemella morbillorum (SP44) 1.0 1.00 1.0 1.00 67.0 1.0 1.00 1.0 1.00 357.0
Parvimonas micra (SP4) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 1334.0
Porphyromonas endodontalis (SP39) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 2086.0
Pseudoramibacter alactolyticus (SP54) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 684.0
Capnocytophaga sp. HMT380 (SP35) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 106.0
Johnsonella sp. HMT166 (SP58) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 484.0
Actinomyces graevenitzii (SP60) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 459.0
Cryptobacterium curtum (SP243) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 539.0
Treponema sp. HMT231 (SP64) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 89.0
Prevotella jejuni (SP236) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 133.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT957 (SP67) 1.0 1.00 1.0 1.00 11.0 1.0 1.00 1.0 1.00 67.0
Prevotella sp. HMT443 (SP229) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 278.0
Treponema maltophilum (SP228) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 127.0
Amaricoccus kaplicensis_nov_95.736% (SPN30) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 229.0
Tannerella forsythia (SP226) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 174.0
Actinomyces sp. HMT175 nov_97.446% (SPN26) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 1925.0
Abiotrophia defectiva (SP49) 1.0 1.00 1.0 109.00 676.0 1.0 1.00 1.0 1.00 2995.0
Actinomycetospora callitridis_nov_97.556% (SPN41) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 105.0
Phocaeicola abscessus (SP107) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 268.0
Prevotella loescheii (SP123) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 125.0
Prevotella pallens (SP118) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 279.0
Selenomonas artemidis_nov_97.126% (SPN46) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 61.0
Selenomonas sp. HMT137 nov_97.710% (SPN82) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 388.0
Porphyromonas gingivalis (SP115) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 2549.0
Bilophila wadsworthia (SP114) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 803.0
Prevotella intermedia (SP112) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 575.0
Streptococcus parasanguinis_clade_411_nov_97.864% (SPN43) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 41.0
Streptococcus sanguinis_nov_97.723% (SPN42) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 46.0
Filifactor alocis (SP126) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 274.0
Selenomonas sp. HMT136 (SP139) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 89.0
Arachnia propionica_nov_97.980% (SPN39) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 416.0
Actinomyces johnsonii (SP125) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 182.0
Arboricoccus pini_nov_88.720% (SPN35) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 134.0
Peptostreptococcus stomatis (SP105) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 336.0
Capnocytophaga ochracea (SP102) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 94.0
Selenomonas sp. HMT137 nov_97.137% (SPN34) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 78.0
Neisseria subflava (SP154) 1.0 1.00 1.0 1.00 35.0 1.0 1.00 1.0 1.00 17.0
Leptotrichia sp. HMT215 nov_97.500% (SPN5) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 264.0
Acinetobacter johnsonii_nov_97.701% (SPN51) 1.0 1.00 1.0 1.00 8.0 1.0 1.00 1.0 1.00 295.0
Prevotella salivae (SP69) 1.0 1.00 1.0 1.00 194.0 1.0 1.00 1.0 1.00 181.0
Streptococcus sp. HMT061 (SP62) 1.0 1.00 1.0 1.00 88.0 1.0 1.00 1.0 1.00 1.0
Pseudomonas multispecies_spp7_2 (SPP7) 1.0 1.00 1.0 1.00 59.0 1.0 1.00 1.0 1.00 1.0
Streptococcus parasanguinis_clade_411 (SP5) 1.0 16.00 64.5 162.50 260.0 1.0 1.00 92.5 317.25 765.0
Porphyromonas pasteri (SP50) 1.0 1.00 1.0 7.25 205.0 1.0 1.00 1.0 1.00 64.0
Mogibacterium vescum (SP65) 1.0 1.00 1.0 1.00 149.0 1.0 1.00 1.0 1.00 1.0
Actinomyces sp. HMT170 (SP51) 1.0 1.00 1.0 1.00 196.0 1.0 1.00 1.0 1.00 1564.0
Streptococcus salivarius_nov_97.373% (SPN49) 1.0 1.00 1.0 1.00 15.0 1.0 1.00 1.0 1.00 32.0
Streptococcus sp. HMT066 (SP63) 1.0 1.00 1.0 1.00 31.0 1.0 1.00 1.0 1.00 158.0
Agrobacterium tumefaciens (SP55) 1.0 1.00 1.0 1.00 227.0 1.0 1.00 1.0 1.00 361.0
Streptococcus gordonii_nov_97.020% (SPN94) 1.0 1.00 1.0 1.00 207.0 1.0 1.00 1.0 1.00 109.0
Streptococcus parasanguinis (SP56) 1.0 1.00 1.0 72.75 245.0 1.0 1.00 1.0 7.00 282.0
Leptotrichia sp. HMT215 (SP61) 1.0 1.00 1.0 1.00 394.0 1.0 1.00 1.0 1.00 383.0
Veillonella multispecies_spp10_2 (SPP10) 1.0 1.00 84.5 556.25 6882.0 1.0 1.00 349.5 1329.25 4749.0
Streptococcus multispecies_spp11_2 (SPP11) 1.0 1.00 1.0 1.00 93.0 1.0 1.00 1.0 1.00 1.0
Dyadobacter multispecies_spp6_2 (SPP6) 1.0 1.00 1.0 1.00 110.0 1.0 1.00 1.0 1.00 1.0
Staphylococcus multispecies_spp5_3 (SPP5) 1.0 1.00 1.0 1.00 215.0 1.0 1.00 1.0 1.00 1.0
Streptococcus oralis_subsp._tigurinus_clade_070 (SP6) 1.0 1.00 1.0 60.75 1493.0 1.0 1.00 1.0 1.00 383.0
Prevotella melaninogenica (SP53) 1.0 1.00 1.0 18.00 762.0 1.0 1.00 1.0 1.00 211.0
Streptococcus multispecies_spp2_2 (SPP2) 1.0 1.00 7.0 72.25 3515.0 1.0 1.00 1.0 1.00 1412.0
Campylobacter showae (SP59) 1.0 1.00 1.0 1.00 57.0 1.0 1.00 1.0 1.00 186.0
Lachnoanaerobaculum multispecies_spp3_2 (SPP3) 1.0 1.00 1.0 1.00 196.0 1.0 1.00 1.0 1.00 1.0
Bergeyella sp. HMT322 (SP57) 1.0 1.00 1.0 24.25 217.0 1.0 1.00 1.0 36.50 189.0
Capnocytophaga gingivalis_nov_97.860% (SPN31) 1.0 1.00 1.0 1.00 92.0 1.0 1.00 1.0 1.00 105.0
Bifidobacterium dentium (SP73) 1.0 1.00 1.0 1.00 723.0 1.0 1.00 1.0 1.00 1.0
Streptococcus intermedius (SP7) 1.0 1.00 1.0 1.00 2990.0 1.0 1.00 1.0 1.00 1269.0
Chryseobacterium profundimaris (SP70) 1.0 1.00 1.0 1.00 76.0 1.0 1.00 1.0 1.00 1.0
Saccharibacteria_(TM7)_[G-1] bacterium HMT352 (SP89) 1.0 1.00 1.0 1.00 34.0 1.0 1.00 1.0 1.00 1.0
Streptococcus oralis (SP91) 1.0 1.00 54.5 98.00 491.0 1.0 1.00 1.0 152.50 1557.0
Capnocytophaga leadbetteri (SP47) 1.0 1.00 1.0 1.00 82.0 1.0 1.00 1.0 1.00 607.0
Abiotrophia defectiva_nov_96.468% (SPN38) 1.0 1.00 1.0 1.00 34.0 1.0 1.00 1.0 1.00 61.0
Cardiobacterium valvarum (SP92) 1.0 1.00 1.0 1.00 148.0 1.0 1.00 1.0 1.00 1.0
Streptococcus oralis_nov_97.740% (SPN37) 1.0 1.00 1.0 1.00 79.0 1.0 1.00 1.0 1.00 134.0
Prevotella histicola (SP93) 1.0 1.00 1.0 1.00 151.0 1.0 1.00 1.0 1.00 343.0
Kingella oralis_nov_97.826% (SPN36) 1.0 1.00 1.0 1.00 8.0 1.0 1.00 1.0 1.00 105.0
Stomatobaculum longum (SP95) 1.0 1.00 1.0 1.00 471.0 1.0 1.00 1.0 1.00 490.0
Fusobacterium periodonticum (SP96) 1.0 1.00 1.0 1.00 216.0 1.0 1.00 1.0 1.00 999.0
Micrococcus antarcticus (SP98) 1.0 1.00 1.0 1.00 111.0 1.0 1.00 1.0 1.00 69.0
Lichenibacterium minor_nov_94.541% (SPN33) 1.0 1.00 1.0 1.00 154.0 1.0 1.00 1.0 1.00 1.0
Micrococcus luteus (SP99) 1.0 1.00 1.0 1.00 136.0 1.0 1.00 1.0 1.00 23.0
Schaalia odontolytica_nov_97.683% (SPN106) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 185.0
Arthrobacter pityocampae_nov_91.587% (SPN19) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 182.0
Actinomyces oris_nov_96.852% (SPN40) 1.0 1.00 1.0 1.00 62.0 1.0 1.00 1.0 1.00 1.0
Acinetobacter lwoffii (SP87) 1.0 1.00 1.0 1.00 79.0 1.0 1.00 1.0 1.00 241.0
Streptococcus peroris (SP85) 1.0 1.00 1.0 1.00 192.0 1.0 1.00 1.0 1.00 1.0
Neisseria mucosa (SP77) 1.0 1.00 1.0 10.25 689.0 1.0 1.00 1.0 1.00 433.0
Actinomyces sp. HMT175 nov_95.577% (SPN47) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 39.0
Schaalia sp. HMT172 (SP72) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 42.0
Lichenibacterium minor_nov_95.815% (SPN32) 1.0 1.00 1.0 1.00 170.0 1.0 1.00 1.0 1.00 1.0
Agrobacterium fabacearum (SP74) 1.0 1.00 1.0 1.00 144.0 1.0 1.00 1.0 1.00 1.0
Bifidobacterium breve (SP75) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 344.0
Ligilactobacillus salivarius (SP76) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 1047.0
Streptococcus parasanguinis_clade_411_nov_97.456% (SPN45) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 71.0
Lachnoanaerobaculum orale (SP83) 1.0 1.00 1.0 1.00 140.0 1.0 1.00 1.0 1.00 1521.0
Prevotella nanceiensis (SP78) 1.0 1.00 1.0 1.00 26.0 1.0 1.00 1.0 1.00 113.0
Streptococcus salivarius (SP79) 1.0 1.00 141.0 323.25 1831.0 1.0 1.00 4.0 418.25 5689.0
Ruminococcaceae_[G-1] bacterium HMT075 (SP8) 1.0 1.00 1.0 1.00 250.0 1.0 1.00 1.0 1.00 1.0
Ligilactobacillus salivarius_nov_95.273% (SPN44) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 37.0
Streptococcus constellatus (SP81) 1.0 1.00 1.0 1.00 1959.0 1.0 1.00 1.0 1.00 10.0
Capnocytophaga gingivalis (SP82) 1.0 1.00 1.0 11.25 405.0 1.0 1.00 1.0 58.75 1082.0
Rothia dentocariosa (SP1) 1.0 1.00 1.0 125.50 586.0 1.0 1.00 1.0 504.00 6287.0
Granulicatella adiacens (SP26) 1.0 44.25 97.5 171.25 604.0 1.0 1.00 36.5 289.75 2108.0
Schaalia meyeri (SP46) 1.0 1.00 1.0 1.00 284.0 1.0 1.00 1.0 1.00 777.0
Arachnia propionica (SP14) 1.0 1.00 1.0 1.00 9511.0 1.0 1.00 1.0 1.00 1382.0
Selenomonas sputigena (SP143) 1.0 1.00 1.0 1.00 68.0 1.0 1.00 1.0 1.00 35.0
Actinomyces viscosus (SP145) 1.0 1.00 1.0 1.00 97.0 1.0 1.00 1.0 1.00 1.0
Oribacterium sinus (SP146) 1.0 1.00 1.0 1.00 95.0 1.0 1.00 1.0 1.00 46.0
Bergeyella sp. HMT900 (SP15) 1.0 1.00 1.0 1.00 65.0 1.0 1.00 1.0 1.00 52.0
Paracoccus yeei (SP150) 1.0 1.00 1.0 1.00 90.0 1.0 1.00 1.0 1.00 1.0
Kingella oralis (SP152) 1.0 1.00 1.0 1.00 204.0 1.0 1.00 1.0 1.00 217.0
Streptococcus sp. HMT057 (SP155) 1.0 1.00 1.0 1.00 60.0 1.0 1.00 1.0 1.00 21.0
Schaalia lingnae_[Not_Validly_Published] (SP156) 1.0 1.00 1.0 1.00 80.0 1.0 1.00 1.0 1.00 150.0
Rothia aeria (SP157) 1.0 1.00 1.0 1.00 946.0 1.0 1.00 1.0 1.00 1.0
Pantoea agglomerans (SP158) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 95.0
Actinomyces sp. HMT169 (SP16) 1.0 1.00 1.0 6.75 549.0 1.0 1.00 1.0 143.25 5031.0
Cardiobacterium hominis (SP161) 1.0 1.00 1.0 1.00 266.0 1.0 1.00 1.0 1.00 298.0
Alloscardovia omnicolens (SP162) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 74.0
Pseudomonas cedrina (SP164) 1.0 1.00 1.0 1.00 54.0 1.0 1.00 1.0 1.00 1.0
Megasphaera micronuciformis (SP165) 1.0 1.00 1.0 1.00 40.0 1.0 1.00 1.0 1.00 150.0
Asticcacaulis excentricus (SP169) 1.0 1.00 1.0 1.00 114.0 1.0 1.00 1.0 1.00 70.0
Sphingobium yanoikuyae (SP17) 1.0 1.00 1.0 16.50 582.0 1.0 1.00 1.0 1.00 24.0
Staphylococcus warneri (SP171) 1.0 1.00 1.0 1.00 236.0 1.0 1.00 1.0 1.00 1.0
Actinomyces sp. HMT171 (SP174) 1.0 1.00 1.0 1.00 191.0 1.0 1.00 1.0 1.00 1.0
Streptococcus sp. HMT056 (SP142) 1.0 1.00 1.0 1.00 126.0 1.0 1.00 1.0 1.00 56.0
Lactobacillus crispatus (SP138) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 229.0
Parascardovia denticolens (SP45) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 12439.0
Rothia aerolata (SP137) 1.0 1.00 1.0 1.00 223.0 1.0 1.00 1.0 1.00 1.0
Actinomyces naeslundii (SP101) 1.0 1.00 1.0 1.00 533.0 1.0 1.00 1.0 1.00 292.0
Leptotrichia sp. HMT212 (SP103) 1.0 1.00 1.0 85.25 199.0 1.0 1.00 1.0 1.00 179.0
Epilithonimonas hispanica (SP104) 1.0 1.00 1.0 1.00 602.0 1.0 1.00 1.0 1.00 73.0
Leptotrichia sp. HMT417 (SP106) 1.0 1.00 1.0 1.00 674.0 1.0 1.00 1.0 1.00 155.0
Streptococcus periodonticum (SP108) 1.0 1.00 1.0 1.00 362.0 1.0 1.00 1.0 1.00 71.0
Actinomyces oris (SP109) 1.0 1.00 1.0 1.00 275.0 1.0 1.00 1.0 1.00 398.0
Haemophilus parahaemolyticus (SP11) 1.0 1.00 1.0 48.50 551.0 1.0 1.00 1.0 1.00 151.0
Leptotrichia wadei (SP110) 1.0 1.00 1.0 86.25 1058.0 1.0 1.00 1.0 1.00 438.0
Neisseria perflava (SP116) 1.0 1.00 1.0 1.00 742.0 1.0 1.00 1.0 1.00 1.0
Pseudomonas aeruginosa (SP117) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 57.0
Streptococcus infantis_clade_431 (SP119) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 383.0
Bifidobacterium scardovii (SP120) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 1052.0
Brevundimonas nasdae (SP122) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 155.0
Porphyromonas catoniae (SP124) 1.0 1.00 1.0 1.00 144.0 1.0 1.00 1.0 1.00 1.0
Leptotrichia hongkongensis (SP128) 1.0 1.00 1.0 1.00 476.0 1.0 1.00 1.0 1.00 396.0
Microbacterium hydrothermale (SP129) 1.0 1.00 1.0 1.00 401.0 1.0 1.00 1.0 1.00 1.0
Schaalia sp. HMT180 (SP13) 1.0 1.00 110.0 247.50 2895.0 1.0 1.00 1.0 66.75 2234.0
Kocuria palustris (SP133) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 296.0
Gemella sanguinis (SP136) 1.0 1.00 1.0 57.25 135.0 1.0 1.00 1.0 1.00 55.0
Micrococcus flavus (SP177) 1.0 1.00 1.0 1.00 30.0 1.0 1.00 1.0 1.00 492.0
Veillonella rogosae (SP18) 1.0 1.00 1.0 1.00 138.0 1.0 1.00 1.0 1.00 1.0
Bifidobacteriaceae_[G-2] bacterium HMT407 (SP180) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 70.0
Streptococcus oralis_subsp._dentisani_clade_058 (SP181) 1.0 1.00 1.0 1.00 52.0 1.0 1.00 1.0 1.00 51.0
Bifidobacterium longum (SP234) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 51.0
Paracoccus chinensis (SP235) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 150.0
Pantoea allii (SP237) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 230.0
Prevotella denticola (SP238) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 139.0
Lancefieldella parvula (SP24) 1.0 1.00 1.0 1.00 246.0 1.0 1.00 1.0 1.00 255.0
Capnocytophaga sputigena (SP100) 1.0 1.00 1.0 106.50 253.0 1.0 1.00 1.0 1.00 199.0
Campylobacter gracilis (SP28) 1.0 1.00 1.0 1.00 188.0 1.0 1.00 1.0 1.00 450.0
Moraxella osloensis (SP29) 1.0 1.00 1.0 128.00 13842.0 1.0 1.00 38.0 220.00 1271.0
Rothia mucilaginosa (SP30) 1.0 1.00 320.0 1939.25 9886.0 1.0 1.00 1.0 118.00 5880.0
Streptococcus sp. HMT074 (SP31) 1.0 1.00 1.0 13.00 56.0 1.0 1.00 1.0 1.00 13.0
Schaalia odontolytica (SP32) 1.0 1.00 1.0 207.25 3227.0 1.0 1.00 1.0 93.50 1324.0
Lactobacillus ultunensis (SP33) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 811.0
Neisseria sicca (SP34) 1.0 1.00 1.0 157.00 643.0 1.0 1.00 1.0 1.00 1071.0
Streptococcus anginosus (SP36) 1.0 1.00 1.0 1.00 2789.0 1.0 1.00 1.0 1.00 3103.0
Acinetobacter johnsonii (SP37) 1.0 1.00 1.0 1.00 252.0 1.0 1.00 1.0 1.00 805.0
Veillonella atypica (SP38) 1.0 1.00 1.0 1.00 270.0 1.0 1.00 1.0 1.00 1528.0
Streptococcus mitis (SP40) 1.0 153.00 252.5 618.25 6939.0 1.0 44.50 272.5 1529.75 4617.0
Campylobacter concisus (SP41) 1.0 1.00 1.0 11.25 33.0 1.0 1.00 1.0 38.00 228.0
Streptococcus sp. HMT064 (SP42) 1.0 1.00 1.0 15.00 861.0 1.0 1.00 1.0 81.00 8528.0
Prevotella oulorum (SP233) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 101.0
Eikenella corrodens (SP23) 1.0 1.00 1.0 15.50 88.0 1.0 1.00 1.0 1.00 335.0
Selenomonas flueggei (SP223) 1.0 1.00 1.0 1.00 192.0 1.0 1.00 1.0 1.00 51.0
Pseudomonas fluorescens (SP199) 1.0 1.00 1.0 1.00 66.0 1.0 1.00 1.0 1.00 1.0
Leptotrichia sp. HMT221 (SP185) 1.0 1.00 1.0 1.00 189.0 1.0 1.00 1.0 1.00 43.0
Selenomonas artemidis (SP187) 1.0 1.00 1.0 1.00 19.0 1.0 1.00 1.0 1.00 246.0
Oribacterium sp. HMT078 (SP188) 1.0 1.00 1.0 1.00 224.0 1.0 1.00 1.0 1.00 1.0
Haemophilus parainfluenzae (SP19) 1.0 1.00 60.0 237.75 900.0 1.0 1.00 1.0 25.75 10776.0
Acidovorax temperans (SP192) 1.0 1.00 1.0 1.00 77.0 1.0 1.00 1.0 1.00 1.0
Paraburkholderia fungorum (SP193) 1.0 1.00 1.0 1.00 241.0 1.0 1.00 1.0 1.00 1.0
Corynebacterium tuberculostearicum (SP194) 1.0 1.00 1.0 1.00 90.0 1.0 1.00 1.0 1.00 61.0
Streptococcus mutans (SP198) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 109.0
Streptococcus vestibularis (SP2) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 590.0
Fusobacterium nucleatum (SP22) 1.0 1.00 210.5 304.50 714.0 1.0 1.00 1.0 407.25 6906.0
Streptococcus gordonii (SP20) 1.0 1.00 1.0 24.75 1807.0 1.0 1.00 1.0 627.50 3025.0
Staphylococcus capitis (SP203) 1.0 1.00 1.0 1.00 93.0 1.0 1.00 1.0 1.00 1.0
Romboutsia timonensis (SP204) 1.0 1.00 1.0 1.00 143.0 1.0 1.00 1.0 1.00 1.0
Peptidiphaga sp. HMT183 (SP208) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 99.0
Olsenella uli (SP209) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 94.0
Veillonella parvula (SP21) 1.0 1.00 120.5 356.25 868.0 1.0 93.25 251.5 470.75 1773.0
Leptothrix sp. HMT025 (SP210) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 43.0
Cutibacterium acnes (SP213) 1.0 1.00 1.0 1.00 1.0 1.0 1.00 1.0 1.00 41.0
Streptococcus multispecies_spp8_2 (SPP8) 1.0 1.00 1.0 1.00 40.0 1.0 1.00 1.0 1.00 1.0
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