GroupBaseline.B.Plaque 2...1 GroupBaseline.B.Plaque 2...2 GroupBaseline.B.Plaque 2...3 GroupBaseline.B.Plaque 2...4 GroupBaseline.B.Plaque 2...5 GroupBaseline.B.Plaque 2...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance StreptococcusStreptococcus gordonii (SP1) -0.276156391709687 0.438766134854795 -0.629393131721703 0.529091713371815 1 FALSE LactobacillusLactobacillus vaginalis (SP11) -0.245206315098533 0.279138677130392 -0.878439052657657 0.379705499047874 1 FALSE ActinomycesActinomyces sp._HMT_170 (SP13) -0.521131342060929 0.279186765154908 -1.86660475030676 0.0619568037435279 1 FALSE FretibacteriumFretibacterium fastidiosum (SP14) 0.213146147976214 0.338794972034297 0.629130198409899 0.529263821676456 1 FALSE SelenomonasSelenomonas dianae (SP15) -0.217989160095578 0.238805579446243 -0.912831101354769 0.361331378257785 1 FALSE ColibacterColibacter massiliensis (SP17) -0.068842773681876 0.266424204634754 -0.258395342781463 0.796101810513388 1 FALSE StreptococcusStreptococcus intermedius (SP18) 0.814039463883041 0.430418507609774 1.89127430510275 0.058587736851074 1 FALSE Saccharibacteria_(TM7)_[G-5]Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP19) -0.385293404687943 0.39839447887338 -0.967115321922919 0.333486386794436 1 FALSE FusobacteriumFusobacterium nucleatum (SP20) -0.554702690739169 0.376251562002584 -1.47428674524774 0.140404402433899 1 FALSE SelenomonasSelenomonas infelix (SP21) -0.00600364950661353 0.28211750456625 -0.0212806699670905 0.983021763479652 1 FALSE PeptococcusPeptococcus sp._Oral_Taxon_167 (SP22) 0.21570074041769 0.255529536819514 0.844132318723077 0.398595469712628 1 FALSE DialisterDialister invisus (SP25) -0.770441098572445 0.38937068799806 -1.97868283956774 0.0478517262270895 1 FALSE VeillonellaVeillonella atypica (SP27) 0.71079444919802 0.328127159978016 2.16621644256953 0.0302946512418433 1 FALSE SelenomonasSelenomonas noxia (SP28) -0.105113515262355 0.354282029656602 -0.296694459395074 0.766699787442285 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP29) -0.206866532713522 0.262505910348692 -0.788045238443344 0.430670245039646 1 FALSE StreptococcusStreptococcus anginosus (SP3) 0.146281062604907 0.417904356556776 0.350034787409624 0.726312590528391 1 FALSE StreptococcusStreptococcus mutans (SP31) 0.75269192311677 0.50304277367522 1.49627817455287 0.134581180197983 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP32) 0.184156336662279 0.325721065269299 0.565380493613525 0.571814989420574 1 FALSE MegasphaeraMegasphaera micronuciformis (SP33) -0.33377156928559 0.30456622029585 -1.09589162239125 0.273126205735971 1 FALSE SelenomonasSelenomonas artemidis (SP36) 0.105689155827496 0.25558767337101 0.413514292115636 0.679229853381096 1 FALSE ActinomycesActinomyces massiliensis (SP37) -0.0287463966509563 0.308413927187013 -0.0932071936995419 0.92573895952498 1 FALSE ActinomycesActinomyces gerencseriae (SP38) 0.0317410337120413 0.33705087610181 0.0941728266045318 0.924971870053104 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP41) -0.137132214819281 0.351279441682777 -0.390379277996913 0.696256108525406 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_171 (SP47) 0.522091321043048 0.346361721033937 1.50735860615467 0.131718762934756 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP48) -0.16927034607625 0.359136684502186 -0.471325691250066 0.637408171875105 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP5) -0.265969240611612 0.349954088924534 -0.760011810203386 0.447247525419084 1 FALSE AnaeroglobusAnaeroglobus geminatus (SP53) 0.308508474008022 0.330854994443203 0.932458264767053 0.351099745730225 1 FALSE ActinomycesActinomyces naeslundii (SP60) -0.389936335906092 0.281274131671787 -1.3863213569924 0.165648798270798 1 FALSE StreptococcusStreptococcus sp._str._2136FAA (SP61) 0.22460506278079 0.329392171032805 0.681877356333465 0.495316504639532 1 FALSE StreptococcusStreptococcus constellatus (SP64) 0.249229480822012 0.284799371122082 0.875105446476485 0.381516533869915 1 FALSE DialisterDialister pneumosintes (SP67) -0.495936181210779 0.32429762389196 -1.52926245730373 0.126199392637529 1 FALSE VeillonellaVeillonella parvula (SP7) -0.0123279045259025 0.303449975549308 -0.0406258214507562 0.967594198605222 1 FALSE StreptococcusStreptococcus pyogenes_nov_91.53% (SPN110) 0.349013963377443 0.467154446884873 0.747106156657126 0.454999484160939 1 FALSE GeosporobacterGeosporobacter subterraneus_nov_88.43% (SPN123) -0.290596525170654 0.269718137084429 -1.07740817251637 0.281297954651313 1 FALSE Candidatus_AmoebophilusCandidatus_Amoebophilus asiaticus_nov_80.21% (SPN146) 0.268062804292371 0.242890192309955 1.10363782803668 0.26975027494907 1 FALSE FusobacteriumFusobacterium hwasookii_nov_87.47% (SPN152) 0.076222803168411 0.432102559629365 0.176399795534169 0.85997986528589 1 FALSE ThermotaleaThermotalea metallivorans_nov_88.34% (SPN156) 0.240712032292688 0.280336553041294 0.858653749149975 0.390531574638313 1 FALSE BacteroidesBacteroides capillosus_nov_81.31% (SPN163) -0.13845118708872 0.220560758178918 -0.627723572551418 0.530185040433855 1 FALSE WinogradskyellaWinogradskyella eckloniae_nov_83.62% (SPN202) -0.479206518610897 0.21389244163268 -2.24040884733012 0.0250643924371252 1 FALSE VagococcusVagococcus lutrae_nov_87.66% (SPN209) 0.339909953584516 0.40917268477375 0.830724938964259 0.406129034487252 1 FALSE FusobacteriumFusobacterium periodonticum_nov_86.34% (SPN212) -0.393659198424659 0.257423468971162 -1.52922808475073 0.12620791055145 1 FALSE ArenibacterArenibacter algicola_nov_84.04% (SPN213) -0.17758810641853 0.255243786317956 -0.695758784103404 0.486579904831001 1 FALSE AlicyclobacillusAlicyclobacillus acidiphilus_nov_83.26% (SPN217) 0.191725380964083 0.240297737520334 0.797865943069311 0.424948288810235 1 FALSE BowdeniellaBowdeniella nasicola_nov_86.78% (SPN218) 0.61137430867989 0.434868510265002 1.40588314455634 0.159758827226865 1 FALSE ThermotaleaThermotalea metallivorans_nov_87.32% (SPN219) -0.185090111954103 0.260287505762016 -0.711098719134575 0.47702306366506 1 FALSE TessaracoccusTessaracoccus lapidicaptus_nov_87.1% (SPN22) 0.16571808033688 0.266459122217652 0.621926841752169 0.533989974364974 1 FALSE IsoptericolaIsoptericola cucumis_nov_88.91% (SPN221) 0.161503733239677 0.241905543792872 0.667631384991996 0.504368918659974 1 FALSE ClostridiumClostridium acetobutylicum_nov_85.54% (SPN222) 0.0539482601197086 0.241828911095119 0.223084410691032 0.82346981111046 1 FALSE StreptococcusStreptococcus rifensis_nov_90.82% (SPN226) 0.268209096552184 0.41610037042182 0.6445778846106 0.51920077032778 1 FALSE EnterococcusEnterococcus sulfureus_nov_88.64% (SPN227) 0.171245305464046 0.247568474831517 0.691708851785702 0.489120186979799 1 FALSE ChryseobacteriumChryseobacterium taeanense_nov_85.32% (SPN228) 0.00438611043457816 0.225106465099535 0.0194846044632204 0.984454518571517 1 FALSE ArenibacterArenibacter algicola_nov_85.44% (SPN229) 0.320019974956497 0.235657015483656 1.35799044344042 0.174466716576476 1 FALSE Bacteroidetes_[G]Bacteroidetes_[G] sp._Oral_Taxon_B68_nov_82.03% (SPN235) 0.249955689772599 0.393555638158403 0.635121608071064 0.525349105263756 1 FALSE CampylobacterCampylobacter curvus_nov_91.68% (SPN242) -0.0936432323949246 0.322983234462227 -0.289932177287289 0.771868124464142 1 FALSE CoprococcusCoprococcus eutactus_nov_89.48% (SPN246) 0.0388250186045295 0.284496682228791 0.136469143683393 0.891450416084546 1 FALSE StreptococcusStreptococcus rifensis_nov_90.65% (SPN249) 0.360778897306034 0.375581510235447 0.960587482274797 0.336759625132429 1 FALSE StreptococcusStreptococcus pyogenes_nov_89.52% (SPN254) 0.233233655849925 0.367104023569272 0.635333967691897 0.525210624332289 1 FALSE CorynebacteriumCorynebacterium terpenotabidum_nov_92.31% (SPN261) 0.39443083765039 0.372031371944334 1.06020853991154 0.289049736819618 1 FALSE GeosporobacterGeosporobacter subterraneus_nov_88.04% (SPN273) 0.535973177493831 0.399613361459856 1.34122937114973 0.17984599306719 1 FALSE StreptococcusStreptococcus pyogenes_nov_89.52% (SPN293) 0.0838421045597434 0.473943110927786 0.176903308913205 0.859584339479332 1 FALSE BowdeniellaBowdeniella nasicola_nov_81.4% (SPN31) -0.0465558901629206 0.284624765230747 -0.163569358151872 0.870070168419129 1 FALSE ClostridiumClostridium diolis_nov_84.18% (SPN320) 0.0929223806159575 0.358001846719048 0.259558383476387 0.795204441440259 1 FALSE KocuriaKocuria indica_nov_89.33% (SPN328) 0.208533816176135 0.365742447031756 0.570165748789965 0.568565284514362 1 FALSE StreptococcusStreptococcus rifensis_nov_91.68% (SPN349) -0.395322902348453 0.486245164590541 -0.813011482965281 0.416211474550262 1 FALSE NatronincolaNatronincola ferrireducens_nov_85.53% (SPN356) -1.11588558124417 0.345921199138752 -3.22583751450451 0.00125604642423105 0.150725570907726 FALSE StreptococcusStreptococcus rifensis_nov_90.59% (SPN362) 0.375147954991366 0.372884382656971 1.00607044016772 0.31438168687735 1 FALSE StreptococcusStreptococcus rifensis_nov_90.67% (SPN37) 0.591966871351646 0.427369176821254 1.38514170758561 0.166009140898107 1 FALSE ThermomonosporaThermomonospora curvata_nov_84.68% (SPN38) -0.127871821524328 0.263721027979838 -0.484875333999169 0.627764780224229 1 FALSE IsoptericolaIsoptericola jiangsuensis_nov_88.29% (SPN389) 0.146943462099274 0.351833022287228 0.417651137872195 0.676202202101024 1 FALSE ArenibacterArenibacter algicola_nov_84.87% (SPN397) -0.443597865685944 0.323065380810791 -1.37309006793812 0.169724348322122 1 FALSE CellulosilyticumCellulosilyticum lentocellum_nov_84.21% (SPN4) -0.520169376550047 0.275545695862375 -1.8877789940506 0.0590556263365724 1 FALSE GeosporobacterGeosporobacter subterraneus_nov_84.49% (SPN405) 0.380590639051983 0.356533340304477 1.06747559352223 0.28575712902117 1 FALSE StreptococcusStreptococcus rifensis_nov_90.43% (SPN420) -0.20426778080829 0.293102833261208 -0.69691506743727 0.485855947700031 1 FALSE StreptococcusStreptococcus pyogenes_nov_85.12% (SPN443) 0.579095612849599 0.36028921715431 1.60730764418513 0.107986898258412 1 FALSE DevrieseaDevriesea agamarum_nov_86.9% (SPN449) 0.156425278846917 0.262692199409007 0.595469828182318 0.551529461435018 1 FALSE ClostridiumClostridium acetobutylicum_nov_85.27% (SPN454) 0.0514010482200682 0.268437352728449 0.191482473275861 0.848147610782957 1 FALSE OceanobacillusOceanobacillus senegalensis_nov_85.28% (SPN458) 0.278416470546122 0.36005651258094 0.773257699327226 0.439369884689087 1 FALSE AnaerovibrioAnaerovibrio lipolyticus_nov_84.95% (SPN471) -0.0939670840089147 0.346159501486978 -0.271456029966722 0.786040313430211 1 FALSE SneathiaSneathia sanguinegens_nov_85.05% (SPN483) 0.434618949642704 0.409813814586814 1.06052781573725 0.288904542395802 1 FALSE FusobacteriumFusobacterium nucleatum_nov_86.73% (SPN504) -0.196435301681822 0.273607950310952 -0.717944421785169 0.47279155638989 1 FALSE StreptosporangiumStreptosporangium subfuscum_nov_84.24% (SPN510) 0.107153939927943 0.296810142374463 0.361018458030841 0.718085648783737 1 FALSE BowdeniellaBowdeniella nasicola_nov_87.61% (SPN515) -0.196294202903991 0.309525989099122 -0.634176805234698 0.525965442998729 1 FALSE LeptotrichiaLeptotrichia sp._HMT_498_nov_84.5% (SPN52) -0.299349037666627 0.264932471378146 -1.12990693858495 0.258515439933029 1 FALSE AnaerovibrioAnaerovibrio lipolyticus_nov_85.06% (SPN530) -0.190059088951933 0.31854171251326 -0.596653692392079 0.550738615702889 1 FALSE MarinoscillumMarinoscillum pacificum_nov_80.04% (SPN536) -0.0464424960695117 0.324325777181518 -0.143197054742642 0.886134555826405 1 FALSE KocuriaKocuria indica_nov_89.81% (SPN541) -0.495279678993418 0.434053431737186 -1.14105693626517 0.253846230267864 1 FALSE PeptostreptococcusPeptostreptococcus anaerobius_nov_95.34% (SPN544) -0.406037399998739 0.297280710955033 -1.36583836433355 0.171989701934716 1 FALSE NatronincolaNatronincola ferrireducens_nov_83.89% (SPN551) -0.143948494717024 0.322691039927537 -0.446087671815582 0.655533917672878 1 FALSE ThermomonosporaThermomonospora curvata_nov_84.47% (SPN565) 0.0202503650983245 0.300828306067013 0.067315357929827 0.94633065076095 1 FALSE ActinomycesActinomyces slackii_nov_90.12% (SPN571) 0.295791867073598 0.301200054153117 0.982044534836738 0.326077908539581 1 FALSE ThermincolaThermincola potens_nov_80.71% (SPN578) -0.0790547238861186 0.293321053060927 -0.269516023691957 0.787532613146951 1 FALSE AlkaliphilusAlkaliphilus peptidifermentans_nov_82.53% (SPN585) -0.13164172706266 0.341738425641196 -0.385211955066696 0.70008038666563 1 FALSE ActinomycesActinomyces israelii_nov_96.89% (SPN586) -0.108193412975009 0.270049072926817 -0.400643526757559 0.688682594432433 1 FALSE ClostridiumClostridium acetobutylicum_nov_85.65% (SPN613) -0.0883087671994221 0.381118821773953 -0.231709278456468 0.816763824328849 1 FALSE CellulosimicrobiumCellulosimicrobium arenosum_nov_91.54% (SPN614) 0.0370648902384604 0.309030100414803 0.119939417515346 0.904531139179954 1 FALSE SneathiaSneathia sanguinegens_nov_85.47% (SPN62) -0.506836065710398 0.283993322438906 -1.78467599645562 0.0743138865741573 1 FALSE CampylobacterCampylobacter rectus_nov_94.88% (SPN630) -0.190367364182383 0.288504624478009 -0.659841638680193 0.509355459484155 1 FALSE AlkaliphilusAlkaliphilus peptidifermentans_nov_87.82% (SPN635) -0.162453460876921 0.314548441389121 -0.516465636133781 0.605529233737405 1 FALSE AnaerovibrioAnaerovibrio lipolyticus_nov_85.17% (SPN64) 0.0844521150597909 0.24192711435768 0.349080818344867 0.727028636613335 1 FALSE ChryseobacteriumChryseobacterium taeanense_nov_85.77% (SPN645) -0.30439997433114 0.319664637929663 -0.952247881725718 0.340971282854787 1 FALSE CorynebacteriumCorynebacterium terpenotabidum_nov_92.36% (SPN66) -0.0809580050854327 0.246668804819328 -0.328205283780128 0.742756453050222 1 FALSE FlavobacteriumFlavobacterium subsaxonicum_nov_81.99% (SPN662) -0.177550188354753 0.314979554232473 -0.563687979009933 0.572966499816311 1 FALSE ArenibacterArenibacter algicola_nov_87.21% (SPN667) 0.103593704832101 0.316557547771519 0.327250781291974 0.743478215473953 1 FALSE CampylobacterCampylobacter rectus_nov_94.49% (SPN676) -0.0456179835361136 0.304842939531155 -0.14964421877795 0.881045319420569 1 FALSE CorynebacteriumCorynebacterium terpenotabidum_nov_92.32% (SPN689) 0.555870352643275 0.437925560357078 1.26932612060832 0.204324773890998 1 FALSE BowdeniellaBowdeniella nasicola_nov_87.76% (SPN690) 0.156010794100437 0.238198992492696 0.654959924338139 0.512493556742406 1 FALSE BhargavaeaBhargavaea cecembensis_nov_82.42% (SPN700) -0.109419793924552 0.303549734414147 -0.36046743422699 0.718497605756626 1 FALSE DermacoccusDermacoccus sp._str._Ellin185_nov_89.57% (SPN710) 0.305318579706645 0.317696741157461 0.961037807924252 0.336533158149466 1 FALSE AlistipesAlistipes indistinctus_nov_86.39% (SPN721) -0.142128664080282 0.283011279626719 -0.502201411434005 0.615525850209977 1 FALSE AnaerovibrioAnaerovibrio lipolyticus_nov_86.86% (SPN729) -0.153741108299648 0.307841203975591 -0.499416927669756 0.617485696381884 1 FALSE StreptococcusStreptococcus pyogenes_nov_90.1% (SPN736) 0.286591713490392 0.255063569564094 1.12360896532649 0.261178951069148 1 FALSE AlkaliphilusAlkaliphilus peptidifermentans_nov_86.76% (SPN750) -0.550675677618396 0.288683757315343 -1.90753952608725 0.0564507576931088 1 FALSE AlistipesAlistipes indistinctus_nov_85.71% (SPN76) -0.0697748135235696 0.272502187312671 -0.256052306264645 0.797910448612622 1 FALSE SelenomonasSelenomonas dianae_nov_87.22% (SPN779) -0.227122107915923 0.306286678468872 -0.741534398594504 0.458369482890534 1 FALSE GeosporobacterGeosporobacter subterraneus_nov_86.78% (SPN90) 0.20880281829982 0.275424961578731 0.758111454760549 0.448384262838466 1 FALSE GramellaGramella marina_nov_84.87% (SPN93) 0.0304593575232669 0.264576502544149 0.115124953389178 0.908346081456853 1 FALSE CellulomonasCellulomonas gilvus_nov_87.87% (SPN96) 0.133666932020909 0.407436278268982 0.328068311905855 0.742860012658786 1 FALSE StreptococcusStreptococcus gordonii_sp._str._2136FAA (SPP14) 0.0523966694953107 0.283187849719846 0.185024426532233 0.853209876741145 1 FALSE multigenusmultigenus multispecies_sppn1_2_nov_97.18% (SPPN1) -0.115569114406707 0.250921909042208 -0.460578013485728 0.645101388819022 1 FALSE MycobacteriumMycobacterium multispecies_sppn9_2_nov_83.57% (SPPN9) 0.767499602901904 0.542432087549937 1.41492293785302 0.157091091807433 1 FALSE