Group24 Weeks.A.Plaque 1...1 Group24 Weeks.A.Plaque 1...2 Group24 Weeks.A.Plaque 1...3 Group24 Weeks.A.Plaque 1...4 Group24 Weeks.A.Plaque 1...5 Group24 Weeks.A.Plaque 1...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance PorphyromonasPorphyromonas catoniae (SP10) -0.310374696112055 0.371388049207082 -0.83571535695537 0.403315053802693 1 FALSE StreptococcusStreptococcus mutans (SP100) 0.932632925668142 0.724041494442288 1.28809320021987 0.197713522063733 1 FALSE TannerellaTannerella forsythia (SP101) 0.0324503347371446 0.353518436322573 0.0917924820971283 0.92686291726222 1 FALSE PrevotellaPrevotella oralis (SP104) 0.0748193390081048 0.386385638797 0.19363902664978 0.846458537666636 1 FALSE StomatobaculumStomatobaculum longum (SP105) -1.12152031568962 0.388010519434612 -2.89043791215722 0.00384705515327985 0.546281831765739 FALSE GranulicatellaGranulicatella adiacens (SP107) -1.63840392437784 0.481300424865879 -3.4041190070306 0.000663778271001049 0.09492029275315 FALSE GranulicatellaGranulicatella paradiacens (SP108) -0.28418185443537 0.450326216295169 -0.6310577624668 0.528002756930027 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_171 (SP109) -0.0830418731643885 0.436022649098961 -0.190453118286388 0.848954076925983 1 FALSE Saccharibacteria_(TM7)_[G-5]Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP110) -0.25171735795259 0.521938434340425 -0.482274041134155 0.629611285420312 1 FALSE PrevotellaPrevotella salivae (SP111) 0.118005859036381 0.361374679861878 0.326547114705116 0.744010448713567 1 FALSE CatonellaCatonella morbi (SP118) 0.630283646892414 0.421808492466298 1.49424124490043 0.135112575898259 1 FALSE PrevotellaPrevotella oris (SP12) 0.0441936572915278 0.50930782466884 0.0867719975051693 0.930852746401078 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP120) 0.457096609408307 0.455875134700009 1.00267940630081 0.316015569253671 1 FALSE BifidobacteriumBifidobacterium dentium (SP121) -0.355293094492923 0.397573014905044 -0.893654954368019 0.371506533661121 1 FALSE CampylobacterCampylobacter showae (SP122) 0.112959199916614 0.384056028320156 0.29412166868124 0.768664933602033 1 FALSE FretibacteriumFretibacterium fastidiosum (SP124) 0.0445598520906938 0.383108633643926 0.116311270949089 0.907405853315327 1 FALSE PrevotellaPrevotella sp._HMT_300 (SP126) -0.0160830773518535 0.408766061107177 -0.039345432221773 0.968614984964589 1 FALSE StreptococcusStreptococcus sp._str._2136FAA (SP128) 0.160256336512754 0.537941616894499 0.297906559893809 0.765774481086639 1 FALSE PrevotellaPrevotella veroralis (SP129) -0.47569052476744 0.378563446461046 -1.25656750331912 0.208910288181085 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP130) -0.178355251619609 0.489591653650308 -0.36429389735267 0.715638556463495 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP139) 0.134158970521281 0.378999436608996 0.353981978763968 0.723352388839369 1 FALSE HaemophilusHaemophilus parainfluenzae (SP140) 0.212082732322274 0.623478693117809 0.340160352973282 0.733735773513355 1 FALSE OribacteriumOribacterium sp._Oral_Taxon_78 (SP142) 0.496959500713807 0.454293722467498 1.09391672421659 0.273991503102491 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP144) -0.0589682057747337 0.37077347709218 -0.159041057189949 0.873636526521584 1 FALSE LeptotrichiaLeptotrichia buccalis (SP146) 0.238276465738596 0.405336323626318 0.587848785933789 0.556633794732026 1 FALSE ActinomycesActinomyces viscosus (SP147) -0.19957944890882 0.582330591560179 -0.342725338152177 0.731805098871528 1 FALSE StreptococcusStreptococcus cristatus (SP15) 0.0466220940531405 0.518574979082552 0.0899042490164545 0.928363304601725 1 FALSE PorphyromonasPorphyromonas gingivalis (SP152) -0.114838633853013 0.368002257136509 -0.312059591010646 0.754995235787078 1 FALSE PorphyromonasPorphyromonas endodontalis (SP155) 0.300587086802247 0.453293054982255 0.663118667931088 0.50725455555436 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP158) 0.108361123320681 0.418313880635903 0.259042619278985 0.795602357047727 1 FALSE ActinomycesActinomyces sp._HMT_169 (SP160) -0.263948185223129 0.390182936336248 -0.676472907046008 0.498740441844411 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_155 (SP165) 0.163495316079888 0.321035405195356 0.509275031457662 0.610559456841494 1 FALSE ScardoviaScardovia wiggsiae (SP166) 0.231227462396051 0.501094080391792 0.461445208483127 0.644479223009545 1 FALSE StreptococcusStreptococcus sanguinis (SP17) -0.344741227454019 0.618535511875768 -0.557350743546733 0.577287812201953 1 FALSE ActinomycesActinomyces odontolyticus (SP170) -0.486808867581189 0.444400599793011 -1.09542801654167 0.273329165582325 1 FALSE ActinomycesActinomyces sp._HMT_171 (SP171) 0.157559851328388 0.553076178213595 0.284879113465523 0.77573675827995 1 FALSE ActinomycesActinomyces naeslundii (SP172) 0.678218586448023 0.493615883939583 1.37398047452427 0.169447744205306 1 FALSE StreptococcusStreptococcus anginosus (SP175) -0.0421190733175723 0.512871208296758 -0.0821240744970838 0.934548049103208 1 FALSE KingellaKingella oralis (SP176) 0.219486324275867 0.529518119359841 0.4145020089987 0.67850649604534 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP18) 0.466782101074867 0.493445907602447 0.945964074041805 0.344166910521555 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_178 (SP181) -0.132717695345046 0.399522690753624 -0.332190632513761 0.739745316701746 1 FALSE GemellaGemella haemolysans (SP183) -0.495484846860922 0.439450390359058 -1.12751031227002 0.259526782961484 1 FALSE PorphyromonasPorphyromonas pasteri (SP184) -0.372160014737615 0.39746427043973 -0.936335772586251 0.349100335391956 1 FALSE OlsenellaOlsenella sp._Oral_Taxon_807 (SP189) 1.48084014743838 0.518256443651515 2.85735018942499 0.00427194239468052 0.598071935255272 FALSE RothiaRothia dentocariosa (SP193) 0.206816776581792 0.615980348606779 0.335752231462528 0.737057714809805 1 FALSE StreptococcusStreptococcus vestibularis (SP198) 0.311097496141115 0.466188455013757 0.667321322086225 0.504566909645616 1 FALSE EikenellaEikenella corrodens (SP200) -0.309931605904373 0.342477134381027 -0.904970214915298 0.365481166782606 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP201) -0.147401478250394 0.616550618958118 -0.239074414521684 0.811047880825931 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP202) -0.500430285292621 0.451908143694354 -1.10737169107332 0.268133260115478 1 FALSE CampylobacterCampylobacter gracilis (SP205) 1.28969114402222 0.450911967257807 2.8601838888096 0.00423395422089235 0.596987545145822 FALSE SelenomonasSelenomonas sputigena (SP21) 0.156296707583384 0.483089106139415 0.323535980416577 0.74628936303211 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP212) -0.094432292026727 0.51008560359779 -0.185130282761692 0.853126849921744 1 FALSE NeisseriaNeisseria sicca (SP215) -0.369616815751173 0.351129519524324 -1.05265093134833 0.292501005313642 1 FALSE LancefieldellaLancefieldella rimae (SP217) -0.00271555333567958 0.496964927223836 -0.00546427561970882 0.995640160543312 1 FALSE TannerellaTannerella sp._HMT_286 (SP218) -0.254187706554867 0.380385862130179 -0.668236472121765 0.503982657687211 1 FALSE LeptotrichiaLeptotrichia sp._HMT_417 (SP220) -0.2476476354053 0.332358780584351 -0.745121386502524 0.456198341410235 1 FALSE PrevotellaPrevotella pleuritidis (SP233) -0.311530664632782 0.379967603127433 -0.819887437951654 0.412280278685718 1 FALSE FilifactorFilifactor alocis (SP234) 0.250805549142169 0.341949789827948 0.733457240223372 0.463279598511692 1 FALSE CorynebacteriumCorynebacterium matruchotii (SP24) 1.13146804041151 0.57105738733652 1.98135610448683 0.0475513527023445 1 FALSE CardiobacteriumCardiobacterium hominis (SP242) 0.0400068126159131 0.39061196888052 0.102420857022306 0.9184226292159 1 FALSE LautropiaLautropia mirabilis (SP245) -0.250318343262082 0.517824783039943 -0.483403559390422 0.62880922138277 1 FALSE ActinomycesActinomyces oris (SP249) 0.315592959467405 0.494685152452026 0.637967316995654 0.523494955505882 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP259) -0.0474889152820594 0.354001926925141 -0.134148747987187 0.893284952658858 1 FALSE ActinomycesActinomyces johnsonii (SP26) 0.043979851983021 0.385794582543981 0.113998106694531 0.90923929429963 1 FALSE ArachniaArachnia propionica (SP260) -0.0389252595682754 0.484444001446152 -0.0803503799243596 0.935958590322144 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_180 (SP262) -0.0257566800586646 0.485918658633344 -0.0530061556621549 0.957727003101446 1 FALSE CapnocytophagaCapnocytophaga endodontalis (SP268) 0.506031151186347 0.446551431326995 1.13319791559642 0.257131149326551 1 FALSE AlloprevotellaAlloprevotella tannerae (SP27) -0.0747256681141023 0.480841848784089 -0.155405916317521 0.876501320284811 1 FALSE LeptotrichiaLeptotrichia sp._HMT_498 (SP271) -0.169389185674955 0.354491563542065 -0.47783700120371 0.63276622339418 1 FALSE ShuttleworthiaShuttleworthia satelles (SP278) -0.260321493742787 0.343319088303186 -0.758249402995317 0.448301691025901 1 FALSE SolobacteriumSolobacterium moorei (SP279) 0.258555026281005 0.368913082818955 0.700856213353355 0.483392752744305 1 FALSE DialisterDialister invisus (SP28) -0.188590133981216 0.517842427555752 -0.364184400400278 0.715720315004787 1 FALSE ActinomycesActinomyces dentalis (SP286) 0.734211313461136 0.564006674538445 1.30177770336136 0.192992387938564 1 FALSE AnaeroglobusAnaeroglobus geminatus (SP287) 0.148687282101015 0.381978424018785 0.389255708572961 0.697086997055184 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP29) -0.399405838016502 0.460203262988443 -0.867890061063153 0.385454520430253 1 FALSE ActinomycesActinomyces israelii (SP293) 0.492089600093908 0.451090542134788 1.09088875542611 0.275321835556982 1 FALSE FretibacteriumFretibacterium sp._HMT_360 (SP294) 0.100269058469 0.360111022686886 0.278439292751622 0.780675160311094 1 FALSE PeptostreptococcusPeptostreptococcus stomatis (SP296) 0.309934201694818 0.423179549632556 0.732394091264411 0.463928064210386 1 FALSE StreptococcusStreptococcus sp._HMT_064 (SP303) 0.123040995108401 0.42553668495775 0.289143097311614 0.772471874510004 1 FALSE ParvimonasParvimonas micra (SP31) 0.278154038925489 0.52403118091435 0.530796733202315 0.595559644095541 1 FALSE ActinomycesActinomyces massiliensis (SP310) 0.170622791106754 0.372619299313756 0.457901110922021 0.64702348872672 1 FALSE TreponemaTreponema denticola (SP311) 0.0441497982019179 0.378210715248413 0.116733335206856 0.907071373181045 1 FALSE RothiaRothia mucilaginosa (SP318) -0.505043188715249 0.49744030428898 -1.01528401370118 0.309970462552644 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP32) 0.0155852024316065 0.363553724407064 0.0428690490161394 0.965805921366261 1 FALSE CapnocytophagaCapnocytophaga granulosa (SP320) -0.0800521116784018 0.3500027432011 -0.228718526449967 0.81908769441613 1 FALSE MogibacteriumMogibacterium timidum (SP324) -0.314497637669566 0.32990018419881 -0.953311494606618 0.340432269231408 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP33) -0.186988451876833 0.40481560740234 -0.461910184433645 0.644145730242368 1 FALSE GemellaGemella morbillorum (SP332) -0.0582344568653591 0.422730116553388 -0.137758003475498 0.890431676197353 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP34) 0.00853443999488734 0.440928651998721 0.0193556031258139 0.984557427339527 1 FALSE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP35) 0.283563090433186 0.435699158512392 0.650823130807404 0.515160666886276 1 FALSE PrevotellaPrevotella loescheii (SP36) -0.432730741922486 0.382400039078659 -1.13161793331688 0.257795097260394 1 FALSE ActinomycesActinomyces sp._HMT_448 (SP361) 0.0314280220605631 0.70526734484692 0.0445618562807337 0.96445654671759 1 FALSE NeisseriaNeisseria elongata (SP369) 0.0406369757216966 0.310474550448899 0.13088665612992 0.895864970733745 1 FALSE StreptococcusStreptococcus salivarius (SP374) -0.792452814604832 0.429508886057051 -1.84502076750881 0.0650345176761058 1 FALSE TreponemaTreponema sp._HMT_231 (SP40) 0.0530542460275535 0.385452501239246 0.137641462584837 0.890523784974857 1 FALSE AlloprevotellaAlloprevotella rava (SP42) -0.0603366199412121 0.37290754533189 -0.161800480297368 0.871462974804462 1 FALSE PeptidiphagaPeptidiphaga sp._HMT_183 (SP422) 0.231735078663822 0.520142787928252 0.445522045180769 0.655942532044854 1 FALSE NeisseriaNeisseria mucosa (SP44) -0.377255906882281 0.410040515262044 -0.920045441463726 0.357549013261158 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP442) -0.152513230163499 0.507628680107346 -0.30044250086746 0.763839649157281 1 FALSE GemellaGemella moribillum (SP45) 0.22579256409147 0.319015959046536 0.707778271552031 0.479082961769474 1 FALSE RothiaRothia aeria (SP465) -0.119618771724901 0.479766460851857 -0.249327081998416 0.803107784242832 1 FALSE LeptotrichiaLeptotrichia wadei (SP49) 0.630904825320142 0.56355270799575 1.11951343036559 0.262921164538658 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP5) -0.487517520265718 0.645617374038343 -0.75511834078487 0.450177979375237 1 FALSE FusobacteriumFusobacterium nucleatum (SP51) 0.838330559382205 0.552377975370121 1.51767557137028 0.129096205308245 1 FALSE StreptococcusStreptococcus mitis (SP52) -0.729061744023006 0.632235516789374 -1.15314898429835 0.248849238824281 1 FALSE StreptococcusStreptococcus constellatus (SP53) 0.235093769943894 0.372709498693541 0.63076946192133 0.52819127354553 1 FALSE PrevotellaPrevotella maculosa (SP55) -0.262121944047325 0.387385794068723 -0.676643150215323 0.498632394329163 1 FALSE StreptococcusStreptococcus sp._str._C300 (SP56) 0.0993272655887342 0.577525766420318 0.171987591487727 0.863447284197848 1 FALSE StreptococcusStreptococcus oralis (SP58) 0.751434675578882 0.531237569823185 1.41449836808226 0.157215626196002 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_150 (SP6) 0.201515238413676 0.349293731236711 0.576922001148405 0.563992147369864 1 FALSE PrevotellaPrevotella denticola (SP60) -0.251128713305114 0.529230636903096 -0.474516582741027 0.635131575615135 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP62) -0.40254276729683 0.50352363098981 -0.799451589800312 0.424028606466307 1 FALSE TreponemaTreponema socranskii (SP63) 0.00992178194890991 0.469661969646574 0.0211253680096265 0.983145648663113 1 FALSE StreptococcusStreptococcus gordonii (SP64) 0.211417148505193 0.617425160974633 0.342417448896092 0.732036758974543 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP65) -0.40638523044405 0.347272759245171 -1.17021914223092 0.241912791378124 1 FALSE CampylobacterCampylobacter concisus (SP67) -0.39351563168219 0.413712863618945 -0.951180556098546 0.341512727074523 1 FALSE CorynebacteriumCorynebacterium durum (SP68) -0.0194568046832632 0.451354208202769 -0.0431076177637459 0.965615746848465 1 FALSE ActinomycesActinomyces sp._HMT_170 (SP69) 0.498687353363943 0.47269456827101 1.05498854194159 0.291430565133127 1 FALSE TreponemaTreponema sp._HMT_237 (SP70) 0.238969228731336 0.393793920908089 0.606838287854401 0.543958236011885 1 FALSE ParvimonasParvimonas sp._Oral_Taxon_110 (SP72) 0.0380627667928022 0.377403536041942 0.100854292972422 0.91966612695447 1 FALSE ActinomycesActinomyces sp._HMT_525 (SP73) -0.239750970696809 0.466281012135503 -0.5141769972549 0.607128248589491 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_848 (SP76) -0.227111197210675 0.331235961136041 -0.685647767324995 0.49293525186913 1 FALSE PrevotellaPrevotella melaninogenica (SP79) 0.0494116002639531 0.40417658919428 0.122252504437366 0.902699045731141 1 FALSE SelenomonasSelenomonas noxia (SP8) -0.185130893093413 0.483548884663523 -0.382858691158466 0.701824541578262 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP82) 0.569898139082002 0.493799062229397 1.154109399295 0.248455320344722 1 FALSE FusobacteriumFusobacterium nucleatum_ss_animalis (SP84) 0.406966848724533 0.602446915254008 0.67552316796733 0.499343437050406 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP86) 0.131140749461049 0.438099786200071 0.299339907463821 0.764680707943302 1 FALSE VeillonellaVeillonella parvula (SP88) 0.16036291078506 0.393999300037826 0.407013187002272 0.683998302857218 1 FALSE PrevotellaPrevotella oulorum (SP9) -0.261020257304742 0.457605961318328 -0.570403970596805 0.568403737140486 1 FALSE MegasphaeraMegasphaera micronuciformis (SP92) -0.114413780573808 0.307130235421163 -0.372525291809562 0.709501784722244 1 FALSE StreptococcusStreptococcus intermedius (SP94) 0.638922562999552 0.551024245214435 1.15951805850378 0.246245079952557 1 FALSE ActinomycesActinomyces sp._HMT_897 (SP95) -0.269658838927781 0.456446397020774 -0.590778765453827 0.554668664568658 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP97) -0.0608655662793681 0.355241825429951 -0.171335585852545 0.863959900688727 1 FALSE CapnocytophagaCapnocytophaga ochracea (SP98) -0.440406774839407 0.394189920926105 -1.11724514367268 0.263889523310783 1 FALSE Peptostreptococcaceae_[XI][G-9]Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP99) 0.75097168121317 0.500135941592123 1.50153512027658 0.133217209998492 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_171_nov_97.974% (SPN109) 0.0326283308036785 0.418472734241192 0.0779700279943991 0.937851894585879 1 FALSE ActinomycesActinomyces viscosus_nov_95.849% (SPN129) 0.209062075358305 0.316936560898496 0.659633823139958 0.50948884353534 1 FALSE ActinomycesActinomyces sp._HMT_175_nov_97.633% (SPN13) 0.068382544957622 0.519890538447784 0.131532582150445 0.895354013637598 1 FALSE FusobacteriumFusobacterium nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP1) -0.0050484714181338 0.42281374132208 -0.011940178203168 0.99047334252485 1 FALSE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP26) -0.747667567382705 0.502548651914129 -1.48775161277412 0.136816410679171 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP3) 1.08763305376132 0.484550276571216 2.24462373947581 0.0247922974430028 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP6) 0.625300279135224 0.495933863830209 1.26085416774303 0.207361393576831 1 FALSE FusobacteriumFusobacterium nucleatum_nucleatum_ss_animalis (SPP60) 1.39223418933427 0.503834527089949 2.76327666024706 0.00572242396086384 0.795416930560073 FALSE