Group24 Weeks.A.Plaque 2...1 Group24 Weeks.A.Plaque 2...2 Group24 Weeks.A.Plaque 2...3 Group24 Weeks.A.Plaque 2...4 Group24 Weeks.A.Plaque 2...5 Group24 Weeks.A.Plaque 2...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance PorphyromonasPorphyromonas catoniae (SP10) 0.314463956756596 0.338798550996391 0.928173853848465 0.353317394732442 1 FALSE StreptococcusStreptococcus mutans (SP100) 0.978549894904388 0.720597503125702 1.35797014374846 0.174473158061584 1 FALSE TannerellaTannerella forsythia (SP101) 0.0843967334351082 0.414625548421933 0.203549283820842 0.838705728925173 1 FALSE PrevotellaPrevotella oralis (SP104) -0.149017367365733 0.381690212724734 -0.390414431383917 0.696230118189645 1 FALSE StomatobaculumStomatobaculum longum (SP105) -0.699632111403724 0.421620305733912 -1.65938903294963 0.0970374247884634 1 FALSE GranulicatellaGranulicatella adiacens (SP107) 0.648815751356777 0.52684217363062 1.23151824935654 0.21812909549206 1 FALSE GranulicatellaGranulicatella paradiacens (SP108) -0.0796377056991216 0.433294822246968 -0.183795655083388 0.854173764815223 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_171 (SP109) -0.0728700909624646 0.45613614866914 -0.159755132705611 0.873073968953957 1 FALSE Saccharibacteria_(TM7)_[G-5]Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP110) -0.688445739921152 0.559837432634715 -1.22972438031015 0.218800333882809 1 FALSE PrevotellaPrevotella salivae (SP111) -0.456795540799973 0.401451654644713 -1.137859404775 0.255179194777047 1 FALSE VeillonellaVeillonella atypica (SP116) 0.105017135459102 0.335060247558128 0.313427618538611 0.753955803966371 1 FALSE CatonellaCatonella morbi (SP118) 0.256743085860152 0.425997415229245 0.602686956966603 0.546716960017075 1 FALSE PrevotellaPrevotella oris (SP12) -0.274003087598129 0.533137037032824 -0.513944949544481 0.607290479760954 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP120) 0.870495252922572 0.456996535095253 1.90481805894028 0.056803725576776 1 FALSE BifidobacteriumBifidobacterium dentium (SP121) -0.0966930069044497 0.386631457448131 -0.250090894162231 0.802517057683805 1 FALSE CampylobacterCampylobacter showae (SP122) 0.847588394341821 0.442940795054346 1.91354782355919 0.0556779573153111 1 FALSE FretibacteriumFretibacterium fastidiosum (SP124) 0.676258310646167 0.362755443491235 1.86422649964316 0.0622899034906144 1 FALSE PrevotellaPrevotella sp._HMT_300 (SP126) -0.363540757288961 0.45085612378511 -0.806334300700847 0.420050117837213 1 FALSE StreptococcusStreptococcus sp._str._2136FAA (SP128) 0.159477513961776 0.541417812911411 0.29455535107758 0.768333574223703 1 FALSE PrevotellaPrevotella veroralis (SP129) -0.569413154914844 0.388079494764998 -1.46725906056864 0.14230559599302 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP130) -0.190093896813139 0.476893502516855 -0.398608695253551 0.690181553638331 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP139) -0.674293531799304 0.327789775785825 -2.05709140922041 0.039677433918761 1 FALSE HaemophilusHaemophilus parainfluenzae (SP140) -0.0964119874694277 0.639937671095079 -0.150658402879213 0.880245188292363 1 FALSE OribacteriumOribacterium sp._Oral_Taxon_78 (SP142) -0.606468883168248 0.48227693318892 -1.2575116938688 0.208568407294372 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP144) 0.169473283595449 0.35335283483427 0.479614897316263 0.631501251397926 1 FALSE LeptotrichiaLeptotrichia buccalis (SP146) -0.0228780457552712 0.394761395618703 -0.0579541110381749 0.953785181137963 1 FALSE ActinomycesActinomyces viscosus (SP147) -0.720696820695523 0.594410479828746 -1.21245645080679 0.225337703216057 1 FALSE StreptococcusStreptococcus cristatus (SP15) -0.570744391775022 0.556631902735709 -1.02535336003911 0.305196486545458 1 FALSE PorphyromonasPorphyromonas gingivalis (SP152) -0.254635354823574 0.353653172119256 -0.720014338617916 0.471516167280876 1 FALSE Peptostreptococcaceae_[XI][G-5]Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP153) 0.364956036881434 0.331758916925652 1.10006398701628 0.271304243452323 1 FALSE PorphyromonasPorphyromonas endodontalis (SP155) 0.174809739473273 0.472253379426111 0.370160907446982 0.711262602370384 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP158) 0.0840040116755898 0.42648842963704 0.196966683825586 0.843853609482098 1 FALSE ActinomycesActinomyces sp._HMT_169 (SP160) -0.198037430466101 0.371949535680748 -0.532430911907579 0.594427580343143 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_155 (SP165) -0.196887729841168 0.348971906114444 -0.564193639635277 0.572622355957131 1 FALSE ScardoviaScardovia wiggsiae (SP166) -0.6457587126547 0.523449423432629 -1.23366018519994 0.217329555976672 1 FALSE StreptococcusStreptococcus sanguinis (SP17) -0.207506352209004 0.624750593542009 -0.332142705191446 0.739781504682646 1 FALSE ActinomycesActinomyces odontolyticus (SP170) 0.343532986432831 0.425561010066379 0.807247323666346 0.419524005919151 1 FALSE ActinomycesActinomyces sp._HMT_171 (SP171) 0.599304296893158 0.519270079860001 1.15412830459004 0.248447570633903 1 FALSE ActinomycesActinomyces naeslundii (SP172) -0.209136189124961 0.502901076980842 -0.415859497419465 0.677512818675008 1 FALSE StreptococcusStreptococcus anginosus (SP175) -0.14738943496597 0.512676047716928 -0.287490386224072 0.773736862077545 1 FALSE KingellaKingella oralis (SP176) 0.355950381537337 0.525952120327156 0.676773355939561 0.498549765609907 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP18) -0.111747599314166 0.547201473832626 -0.204216553971392 0.838184275743313 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_178 (SP181) -0.0790892290014 0.360866923551442 -0.219164528084342 0.826521886238225 1 FALSE GemellaGemella haemolysans (SP183) 0.229011371800035 0.482455870419081 0.474678381674797 0.635016228995806 1 FALSE PorphyromonasPorphyromonas pasteri (SP184) -0.266913456253026 0.432122385534159 -0.617680234091752 0.536786143847092 1 FALSE OlsenellaOlsenella sp._Oral_Taxon_807 (SP189) 0.481317104035061 0.575972333106718 0.835660111378789 0.403346141430742 1 FALSE RothiaRothia dentocariosa (SP193) 0.66474000575321 0.603881962394857 1.10077804463144 0.270993269517316 1 FALSE StreptococcusStreptococcus vestibularis (SP198) 0.0262121300800416 0.44639533533864 0.0587195429812385 0.953175493146887 1 FALSE EikenellaEikenella corrodens (SP200) 0.431287526523649 0.419574563171047 1.02791628563962 0.30398920816835 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP201) 0.153207482772062 0.571185450020711 0.268227215463046 0.788524427381337 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP202) 0.106102753072575 0.468421543922757 0.226511257753062 0.820803804332357 1 FALSE CampylobacterCampylobacter gracilis (SP205) 0.340582294960118 0.445788112168836 0.764000397639869 0.444867005635142 1 FALSE SelenomonasSelenomonas sputigena (SP21) -0.303986453079345 0.481245010839541 -0.63166671078633 0.527604684925804 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP212) 0.129157035024096 0.504633953209825 0.25594202332714 0.797995605100292 1 FALSE LancefieldellaLancefieldella rimae (SP217) -0.537586155839708 0.542252760484259 -0.991394041700438 0.321493208532378 1 FALSE TannerellaTannerella sp._HMT_286 (SP218) -0.267479576551471 0.380065604444604 -0.70377212097986 0.481574698180105 1 FALSE LeptotrichiaLeptotrichia sp._HMT_417 (SP220) 0.313592836087111 0.40088561748687 0.782250154178658 0.434067574519076 1 FALSE PrevotellaPrevotella pleuritidis (SP233) 0.447739211488199 0.446103829270142 1.00366592284297 0.315539667685165 1 FALSE FilifactorFilifactor alocis (SP234) -0.0131668715139217 0.387765500315313 -0.0339557580630947 0.972912430289757 1 FALSE CorynebacteriumCorynebacterium matruchotii (SP24) 0.359910232858014 0.612953939154792 0.587173374486013 0.557087272414978 1 FALSE CardiobacteriumCardiobacterium hominis (SP242) 0.516379995065966 0.407581832364897 1.26693575145338 0.205178263909871 1 FALSE LautropiaLautropia mirabilis (SP245) 0.0640791195665286 0.529898784756681 0.120927092889923 0.903748782617897 1 FALSE ActinomycesActinomyces oris (SP249) -0.286546042668993 0.494220815041408 -0.579793553707334 0.562053845230167 1 FALSE AbiotrophiaAbiotrophia defectiva (SP256) 0.178141644112485 0.353576012098197 0.503828421660602 0.614381953413976 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP259) -0.153395873464213 0.354737682044881 -0.432420577875924 0.665435764762706 1 FALSE ArachniaArachnia propionica (SP260) -0.0305045478051565 0.434125488305391 -0.0702666593574844 0.943981418870265 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_180 (SP262) -0.142988511725037 0.52357467227662 -0.27310051325304 0.784775952200816 1 FALSE CapnocytophagaCapnocytophaga endodontalis (SP268) 0.326415981516342 0.497445250124129 0.656184738792641 0.511705266999318 1 FALSE AlloprevotellaAlloprevotella tannerae (SP27) 0.0817437922883491 0.50263142598125 0.162631678130285 0.870808443493476 1 FALSE LeptotrichiaLeptotrichia sp._HMT_498 (SP271) -0.164254208557448 0.351067369255968 -0.467870907243696 0.639876909451732 1 FALSE ShuttleworthiaShuttleworthia satelles (SP278) 0.0145232666476742 0.378620294266064 0.038358394591148 0.969401932857306 1 FALSE SolobacteriumSolobacterium moorei (SP279) -0.010129876715546 0.408938373535236 -0.024771157150096 0.980237497256347 1 FALSE DialisterDialister invisus (SP28) -0.598393479589538 0.515771505636554 -1.16019104012156 0.245971034115338 1 FALSE ActinomycesActinomyces dentalis (SP286) 0.588605433698565 0.547884800148119 1.07432334961554 0.282677783392742 1 FALSE AnaeroglobusAnaeroglobus geminatus (SP287) -0.488940470373352 0.415469370989898 -1.17683878647517 0.239259858299953 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP29) -0.214441044037482 0.487536304774061 -0.439846308752044 0.660048425008601 1 FALSE ActinomycesActinomyces israelii (SP293) -0.0913515361082336 0.494668557040945 -0.184672210933901 0.85348614370961 1 FALSE PeptostreptococcusPeptostreptococcus stomatis (SP296) -0.175097587690669 0.412798573216543 -0.4241719789056 0.671440394806033 1 FALSE StreptococcusStreptococcus sp._HMT_064 (SP303) -0.137322889171846 0.536738723927178 -0.255846807860425 0.798069128966596 1 FALSE ParvimonasParvimonas micra (SP31) -0.201245397805737 0.531610678850911 -0.378557854106193 0.705016224249888 1 FALSE ActinomycesActinomyces massiliensis (SP310) -0.116846362109503 0.375547929371268 -0.311135684611879 0.755697474110012 1 FALSE TreponemaTreponema denticola (SP311) 0.230400838971647 0.360500645729571 0.639113526427584 0.522749081039208 1 FALSE RothiaRothia mucilaginosa (SP318) 0.254258297079405 0.408291184851228 0.622737660064962 0.533456930395166 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP32) -0.119201368071006 0.425033265146449 -0.280451855997517 0.779130857221951 1 FALSE CapnocytophagaCapnocytophaga granulosa (SP320) 0.128480506062514 0.471227293795403 0.272650815761741 0.785121645924219 1 FALSE MogibacteriumMogibacterium timidum (SP324) -0.00373770288784186 0.385233451709893 -0.00970243594176918 0.992258697617577 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP33) 0.21135733129403 0.415756836647195 0.508367662690739 0.61119552643846 1 FALSE GemellaGemella morbillorum (SP332) 0.265103502361665 0.414453673901036 0.639645680701499 0.522402977167409 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP34) 1.12532298708336 0.473751252981151 2.37534566927707 0.0175325225044519 1 FALSE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP35) -0.253608084000644 0.461451975098051 -0.549587167650017 0.582602562352702 1 FALSE PrevotellaPrevotella loescheii (SP36) -0.191578796836992 0.384160974904221 -0.498694061479714 0.61799492881896 1 FALSE ActinomycesActinomyces sp._HMT_448 (SP361) -0.0667927263908425 0.685541456234447 -0.0974306160238982 0.92238443231057 1 FALSE NeisseriaNeisseria elongata (SP369) -0.00339938428336629 0.318518813873727 -0.0106724756444495 0.991484758108195 1 FALSE StreptococcusStreptococcus salivarius (SP374) -0.375390640514439 0.373272626558896 -1.00567417432955 0.314572330225006 1 FALSE TreponemaTreponema sp._HMT_231 (SP40) 0.0780455575555209 0.398378655533536 0.195907979685801 0.844682191410324 1 FALSE PrevotellaPrevotella intermedia (SP41) -0.0890399728928251 0.3705948763 -0.240262287978171 0.810126928649891 1 FALSE AlloprevotellaAlloprevotella rava (SP42) -0.402312699346129 0.372827266708238 -1.07908604136769 0.280549373227302 1 FALSE PeptidiphagaPeptidiphaga sp._HMT_183 (SP422) -0.27514911152817 0.587979331981373 -0.467957114412461 0.639815258403964 1 FALSE NeisseriaNeisseria mucosa (SP44) 0.434546004085019 0.37822610575768 1.14890537027981 0.250595002992831 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP442) 0.0505909431647236 0.37896428136667 0.13349791959885 0.89379960946504 1 FALSE GemellaGemella moribillum (SP45) -0.0539595044007548 0.37218336499168 -0.144980967652762 0.884725898624284 1 FALSE RothiaRothia aeria (SP465) -0.220791010725008 0.502847716137874 -0.439081263848218 0.6606026545568 1 FALSE LeptotrichiaLeptotrichia wadei (SP49) -0.183939223142567 0.549975275847006 -0.334449985700332 0.738040025624855 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP5) -0.550413908830822 0.532931302572274 -1.03280461510549 0.301695343547576 1 FALSE FusobacteriumFusobacterium nucleatum (SP51) 0.787772360857288 0.578824559808984 1.36098641204385 0.173517983551007 1 FALSE StreptococcusStreptococcus mitis (SP52) -0.52171987088305 0.622844353248929 -0.837640845841525 0.402232445331007 1 FALSE StreptococcusStreptococcus constellatus (SP53) -0.114324457757441 0.425574826200546 -0.268635386115548 0.788210278721707 1 FALSE PrevotellaPrevotella maculosa (SP55) -0.100704049040872 0.405823303917141 -0.248147526445237 0.804020264515632 1 FALSE StreptococcusStreptococcus sp._str._C300 (SP56) -0.400274197686293 0.640411090868536 -0.625026960640913 0.531953363386416 1 FALSE StreptococcusStreptococcus oralis (SP58) -0.177294239422815 0.580737954442333 -0.305291290274054 0.760144308862089 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_150 (SP6) 0.252234523300028 0.345658988297077 0.729720712725239 0.46556091769637 1 FALSE PrevotellaPrevotella denticola (SP60) -0.58614875809872 0.560008008280618 -1.0466792428529 0.295247540317301 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP62) -0.044958483613857 0.481173234559515 -0.0934351297719495 0.925557883054468 1 FALSE TreponemaTreponema socranskii (SP63) -0.387600617919938 0.490255441709628 -0.79060951688428 0.429171891568988 1 FALSE StreptococcusStreptococcus gordonii (SP64) -0.0569866240527599 0.651053422615104 -0.0875298740061301 0.930250340528135 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP65) 0.189189113619535 0.345395921994407 0.547745649477003 0.583866562560467 1 FALSE CampylobacterCampylobacter concisus (SP67) 1.07033313112588 0.398367133137313 2.68680079778808 0.00721399612272566 1 FALSE CorynebacteriumCorynebacterium durum (SP68) 0.671348750394971 0.477628123772963 1.4055888189576 0.159846258099922 1 FALSE ActinomycesActinomyces sp._HMT_170 (SP69) -0.183473050020154 0.464974618944241 -0.394587236689914 0.693147534436756 1 FALSE TreponemaTreponema sp._HMT_237 (SP70) 0.165275572078356 0.369640385123067 0.447125310789106 0.65478458493633 1 FALSE ParvimonasParvimonas sp._Oral_Taxon_110 (SP72) 0.13014242637251 0.437653402230462 0.297364137258503 0.766188520306513 1 FALSE ActinomycesActinomyces sp._HMT_525 (SP73) -0.0712158543688807 0.392088419582992 -0.181632128907614 0.855871433002747 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_848 (SP76) 0.269330058489376 0.334153416022088 0.806007197818298 0.420238698862 1 FALSE PrevotellaPrevotella melaninogenica (SP79) -0.220148920462821 0.381243126780119 -0.577450201718105 0.563635369697893 1 FALSE SelenomonasSelenomonas noxia (SP8) -0.0918834698589985 0.431714225344293 -0.212834010243052 0.831456435104638 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP82) 0.223713590296963 0.492984368077852 0.453794490825789 0.649976749217369 1 FALSE FusobacteriumFusobacterium nucleatum_ss_animalis (SP84) 0.0441851851411535 0.576039686485125 0.0767051058769271 0.938858142608373 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP86) -0.0290561131562769 0.488557307125447 -0.0594732956246955 0.95257513482177 1 FALSE VeillonellaVeillonella parvula (SP88) -0.504951367668023 0.419346491375718 -1.20413876842386 0.228535947739662 1 FALSE PrevotellaPrevotella oulorum (SP9) -0.202657776327734 0.439896166384645 -0.460694572524485 0.645017749505685 1 FALSE MegasphaeraMegasphaera micronuciformis (SP92) -0.172077678354896 0.382534589716507 -0.449835604363049 0.652828983079287 1 FALSE StreptococcusStreptococcus intermedius (SP94) -0.187400706894936 0.610288769848712 -0.307068909266333 0.758790922016339 1 FALSE ActinomycesActinomyces sp._HMT_897 (SP95) 0.25727291530745 0.47760285798404 0.538675409928235 0.590110843942735 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP97) 0.0258205047534324 0.395795416353521 0.0652369979200814 0.947985303775802 1 FALSE CapnocytophagaCapnocytophaga ochracea (SP98) -0.0580745009930774 0.385091713148787 -0.150806935101819 0.880128015418384 1 FALSE Peptostreptococcaceae_[XI][G-9]Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP99) 0.245613149897814 0.490375792451726 0.500867199561024 0.616464588098447 1 FALSE ActinomycesActinomyces viscosus_nov_95.849% (SPN129) 0.255387730490156 0.453788188912245 0.562790607446912 0.573577476855002 1 FALSE ActinomycesActinomyces sp._HMT_175_nov_97.633% (SPN13) -0.0719824750617071 0.533910751784386 -0.134821175301554 0.89275326322427 1 FALSE FusobacteriumFusobacterium nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP1) -0.404673045583509 0.423705498024035 -0.955080940584241 0.339536766569155 1 FALSE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP26) -0.226903140611688 0.539652387865447 -0.420461663311055 0.674148229653473 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP3) -0.171477107638786 0.510868574042517 -0.335657968314401 0.737128805046486 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP6) 0.0990522097619975 0.504400550679708 0.196376093619484 0.844315806479741 1 FALSE FusobacteriumFusobacterium nucleatum_nucleatum_ss_animalis (SPP60) -0.489875518331572 0.533671722968598 -0.917934185470039 0.358653323042923 1 FALSE