Group12 Weeks.B.Plaque 2...1 Group12 Weeks.B.Plaque 2...2 Group12 Weeks.B.Plaque 2...3 Group12 Weeks.B.Plaque 2...4 Group12 Weeks.B.Plaque 2...5 Group12 Weeks.B.Plaque 2...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance PorphyromonasPorphyromonas catoniae (SP10) 0.299717447874982 0.330597930885189 0.906592025765185 0.364622580206352 1 FALSE StreptococcusStreptococcus mutans (SP100) -0.507481882033723 0.54491018526053 -0.931312894786666 0.351691733670804 1 FALSE TannerellaTannerella forsythia (SP101) -0.351817135476193 0.406441229807166 -0.865603953720717 0.386707386680366 1 FALSE PrevotellaPrevotella oralis (SP104) -0.55745303578253 0.336356951065602 -1.65732574878111 0.0974536342258185 1 FALSE StomatobaculumStomatobaculum longum (SP105) 0.0566834959786941 0.413916738154069 0.136944198563904 0.891074902511765 1 FALSE GranulicatellaGranulicatella adiacens (SP107) -0.413728192405829 0.455715131031349 -0.907865822821161 0.363949116570513 1 FALSE GranulicatellaGranulicatella paradiacens (SP108) -0.397697422055667 0.475076091363299 -0.837123629847205 0.402523079320991 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_171 (SP109) 0.529290942971591 0.325825997010281 1.62445890698798 0.104277903752195 1 FALSE Saccharibacteria_(TM7)_[G-5]Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP110) -0.210315122920131 0.495910229750648 -0.424099182277166 0.671493481844046 1 FALSE PrevotellaPrevotella salivae (SP111) -0.339015038014433 0.396287476397502 -0.85547754649299 0.392286829599973 1 FALSE VeillonellaVeillonella atypica (SP116) -0.702994313137334 0.288457198393792 -2.4370836195172 0.0148062550557714 1 FALSE CatonellaCatonella morbi (SP118) 0.0488278257923988 0.404734597088188 0.120641591165382 0.903974924428916 1 FALSE PrevotellaPrevotella oris (SP12) -0.940804226065114 0.519739541707823 -1.81014556439887 0.0702732166283619 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP120) 0.0839778705517722 0.441954763033765 0.190014629495816 0.84929766669871 1 FALSE BifidobacteriumBifidobacterium dentium (SP121) 0.0108138472037652 0.316467324458306 0.0341705015589688 0.972741189144296 1 FALSE CampylobacterCampylobacter showae (SP122) 0.916383092404946 0.344449337607014 2.66042924852553 0.00780411215147764 1 FALSE FretibacteriumFretibacterium fastidiosum (SP124) 0.266895127888905 0.393379075687371 0.678468033467581 0.497474985433647 1 FALSE PrevotellaPrevotella sp._HMT_300 (SP126) -0.556569266926839 0.44265103374969 -1.25735449483118 0.208625299162317 1 FALSE StreptococcusStreptococcus sp._str._2136FAA (SP128) 0.197861520608848 0.456247669717062 0.433671301228891 0.664527149685736 1 FALSE PrevotellaPrevotella veroralis (SP129) 0.132345129728944 0.407576902050539 0.324712045906208 0.745399016968029 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP130) -0.235785959890459 0.470154272182257 -0.501507640877196 0.616013901716138 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP139) -0.148173880642254 0.366086895251606 -0.404750573058389 0.685660863843211 1 FALSE HaemophilusHaemophilus parainfluenzae (SP140) 1.44660827782037 0.519748200463702 2.78328674640864 0.00538112244284866 0.753357141998812 FALSE OribacteriumOribacterium sp._Oral_Taxon_78 (SP142) -0.390240797273468 0.414544469305655 -0.941372581636669 0.346513959320374 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP144) -0.439519443109318 0.402865917896284 -1.09098194606393 0.275280826787169 1 FALSE LeptotrichiaLeptotrichia buccalis (SP146) -0.0371149116146565 0.356109073677822 -0.104223437025463 0.916992035199467 1 FALSE ActinomycesActinomyces viscosus (SP147) -0.0286947796071507 0.544861524624096 -0.0526643528866301 0.957999341866584 1 FALSE StreptococcusStreptococcus cristatus (SP15) 0.272535226675411 0.484551408643022 0.562448528296804 0.573810463328517 1 FALSE PorphyromonasPorphyromonas gingivalis (SP152) -0.536384667637267 0.410550456861831 -1.30650120751853 0.191382168656851 1 FALSE Peptostreptococcaceae_[XI][G-5]Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP153) -0.712218263402546 0.370772192595056 -1.92090528261488 0.0547436496690534 1 FALSE PorphyromonasPorphyromonas endodontalis (SP155) -0.553588189918494 0.488547199397404 -1.13313143663768 0.257159061503502 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP158) 0.398755508792116 0.393155747112236 1.0142431128656 0.310466761225878 1 FALSE ActinomycesActinomyces sp._HMT_169 (SP160) -0.0806260649678309 0.311964286982251 -0.258446457919134 0.796062365854215 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_155 (SP165) 0.191885315229195 0.32619900455492 0.588246170435167 0.55636707109526 1 FALSE ScardoviaScardovia wiggsiae (SP166) -0.288990669843161 0.515502137947418 -0.560600332316446 0.575070024929339 1 FALSE StreptococcusStreptococcus sanguinis (SP17) 0.611339781525328 0.61974122194222 0.986443631439324 0.323915463343177 1 FALSE ActinomycesActinomyces odontolyticus (SP170) 0.156474481869089 0.385969476698489 0.405406363237691 0.685178834380155 1 FALSE ActinomycesActinomyces sp._HMT_171 (SP171) 0.0348624037251881 0.364910986625249 0.0955367336226316 0.923888514471382 1 FALSE ActinomycesActinomyces naeslundii (SP172) 0.321119648298198 0.366171481530476 0.876965204816127 0.380505537628531 1 FALSE StreptococcusStreptococcus anginosus (SP175) -0.501870542333515 0.541894240597863 -0.926141126319795 0.354372643585593 1 FALSE KingellaKingella oralis (SP176) 0.904393406951507 0.452555165365422 1.99841583118655 0.0456715967122477 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP18) -0.359120349539259 0.406359970694051 -0.883749324338939 0.376831547588125 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_178 (SP181) 0.755968820720164 0.283977844879908 2.66206971547325 0.00776617916340717 1 FALSE GemellaGemella haemolysans (SP183) -0.391779576661785 0.36030336038624 -1.08736031837672 0.276877600930539 1 FALSE PorphyromonasPorphyromonas pasteri (SP184) -0.347055295838046 0.375073547316368 -0.925299313484538 0.354810235767008 1 FALSE OlsenellaOlsenella sp._Oral_Taxon_807 (SP189) 0.386968239720845 0.533962387128232 0.724710670731034 0.468629547428347 1 FALSE RothiaRothia dentocariosa (SP193) 0.377522856664036 0.583168261502961 0.647365231590401 0.517395592562384 1 FALSE StreptococcusStreptococcus vestibularis (SP198) 0.0491590219688595 0.410046871999468 0.119886347941519 0.90457317923536 1 FALSE EikenellaEikenella corrodens (SP200) 0.417370007724271 0.319600397013411 1.30591204399148 0.191582470323455 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP201) -0.268129674673726 0.544873747052147 -0.492095051604798 0.622652150263162 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP202) 0.0217703451783905 0.401258684579642 0.0542551376830562 0.956731891816929 1 FALSE PrevotellaPrevotella multiformis (SP204) -0.198731367255524 0.319009351978789 -0.622964079337516 0.533308127063567 1 FALSE CampylobacterCampylobacter gracilis (SP205) -0.349502062255865 0.457910364642556 -0.763254316221224 0.44531174125907 1 FALSE SelenomonasSelenomonas sputigena (SP21) -0.834654614937176 0.487667300403783 -1.71152466906453 0.0869843012106858 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP212) -0.6460752183034 0.521052461085584 -1.23994274387907 0.214996572483606 1 FALSE LancefieldellaLancefieldella rimae (SP217) 0.232374769616985 0.489457258032372 0.47476008538751 0.634957985704455 1 FALSE TannerellaTannerella sp._HMT_286 (SP218) -0.423464672799105 0.350157939665278 -1.20935333696532 0.226527127714948 1 FALSE PrevotellaPrevotella pleuritidis (SP233) 0.215005780339828 0.470854172492394 0.456629234486186 0.647937562673272 1 FALSE FilifactorFilifactor alocis (SP234) -0.335216436906173 0.416635022553505 -0.804580553146188 0.421061767903871 1 FALSE CorynebacteriumCorynebacterium matruchotii (SP24) 0.935364499269609 0.536178631050667 1.74450163639815 0.0810716563153241 1 FALSE CardiobacteriumCardiobacterium hominis (SP242) 0.140196355086825 0.344588362493598 0.406851682605589 0.684116925099528 1 FALSE LautropiaLautropia mirabilis (SP245) 0.618135502514588 0.440054052543032 1.40468085441422 0.160116201431758 1 FALSE ActinomycesActinomyces oris (SP249) 0.358714055077693 0.461197496615161 0.777788382873675 0.436693777668548 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP259) 0.324281808545832 0.305124695728551 1.06278453722515 0.287879673347401 1 FALSE ArachniaArachnia propionica (SP260) -0.179264655915451 0.358962218663684 -0.499397002232724 0.617499730651206 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_180 (SP262) 0.63942124871858 0.419010206104899 1.52602786137983 0.127002925958314 1 FALSE CapnocytophagaCapnocytophaga endodontalis (SP268) 0.135860493369732 0.355472156151655 0.38219728611253 0.702315034687491 1 FALSE AlloprevotellaAlloprevotella tannerae (SP27) -0.711021987536245 0.488796759816108 -1.45463727665409 0.145769705505526 1 FALSE ShuttleworthiaShuttleworthia satelles (SP278) 0.0905867579063949 0.332499378574608 0.272441886341958 0.785282269626989 1 FALSE SolobacteriumSolobacterium moorei (SP279) 0.00149891085349883 0.373283395035163 0.00401547690959475 0.996796121579495 1 FALSE DialisterDialister invisus (SP28) -0.104647045961428 0.503271779011337 -0.207933467215278 0.835280917180921 1 FALSE ActinomycesActinomyces dentalis (SP286) 0.875236671395603 0.430148809793988 2.03472996197474 0.0418780516835988 1 FALSE AnaeroglobusAnaeroglobus geminatus (SP287) -0.605618454878309 0.423726910941951 -1.42926597116999 0.152927802615525 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP29) -0.351205313215996 0.497512378330552 -0.705922763961164 0.480236170250237 1 FALSE ActinomycesActinomyces israelii (SP293) 0.322643536597182 0.412884485649547 0.781437781779572 0.434545057012435 1 FALSE FretibacteriumFretibacterium sp._HMT_360 (SP294) -0.251317346838937 0.335657471202503 -0.74873157429979 0.454019008956336 1 FALSE PeptostreptococcusPeptostreptococcus stomatis (SP296) -0.294430589145634 0.42908361495328 -0.686184647665217 0.492596677639334 1 FALSE StreptococcusStreptococcus sp._HMT_064 (SP303) 0.023522801877567 0.425160994862958 0.0553268106947325 0.955878103028467 1 FALSE ParvimonasParvimonas micra (SP31) -0.201970160638596 0.470252151440138 -0.429493326123158 0.667564249687933 1 FALSE ActinomycesActinomyces massiliensis (SP310) 0.113963093756275 0.343610906309621 0.331663202953125 0.740143589112297 1 FALSE TreponemaTreponema denticola (SP311) -0.515334632495893 0.398004514770713 -1.29479594670621 0.195390630623633 1 FALSE RothiaRothia mucilaginosa (SP318) 0.864457466223922 0.471470879979048 1.83353310444611 0.0667233301585163 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP32) 0.0103802425136618 0.333857996349759 0.0310917894049397 0.975196337611229 1 FALSE CapnocytophagaCapnocytophaga granulosa (SP320) -0.264950891353668 0.357825068193563 -0.740448098539436 0.459028142823324 1 FALSE MogibacteriumMogibacterium timidum (SP324) -0.352803601853056 0.430066681278153 -0.82034627933633 0.41201873079722 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP33) 0.227256415631483 0.413417014910264 0.549702618506911 0.582523360566572 1 FALSE GemellaGemella morbillorum (SP332) -0.561166145701497 0.40625764370165 -1.38130606131711 0.167184875316291 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP34) 0.473698029347791 0.431189119524388 1.09858530259365 0.271948991358222 1 FALSE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP35) -0.0324965204201935 0.388237976125703 -0.0837025804236931 0.93329290546611 1 FALSE PrevotellaPrevotella loescheii (SP36) 0.238355614010038 0.382972509759974 0.622383090001488 0.533689996913813 1 FALSE ActinomycesActinomyces sp._HMT_448 (SP361) -0.358159202814089 0.648803541139084 -0.552030283597527 0.580927605173552 1 FALSE StreptococcusStreptococcus salivarius (SP374) 0.187951213127365 0.338313773602783 0.555552944610645 0.57851650683313 1 FALSE TreponemaTreponema sp._HMT_231 (SP40) 0.197745047902255 0.330159853513737 0.598937289915012 0.54921470350376 1 FALSE PrevotellaPrevotella intermedia (SP41) -0.777791882153628 0.475524221624684 -1.63565144903915 0.101912556068507 1 FALSE AlloprevotellaAlloprevotella rava (SP42) -0.536922937955236 0.371695076452378 -1.44452528959992 0.148591271218725 1 FALSE PeptidiphagaPeptidiphaga sp._HMT_183 (SP422) -0.409174307940656 0.373724366557741 -1.09485584712989 0.273579795105787 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP442) 0.205090459214325 0.411588610171 0.49828992869632 0.618279705416154 1 FALSE GemellaGemella moribillum (SP45) -0.229849401495939 0.377174480265605 -0.6093980730989 0.542260614805649 1 FALSE RothiaRothia aeria (SP465) 0.5414004082494 0.344988756018354 1.56932769200338 0.116571602972505 1 FALSE LeptotrichiaLeptotrichia wadei (SP49) 0.793188861085349 0.534289627341247 1.48456720942244 0.137658507065013 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP5) 0.375248701613397 0.566459358772814 0.662445938621866 0.507685470823574 1 FALSE FusobacteriumFusobacterium nucleatum (SP51) 0.0282666991932372 0.494492771682936 0.0571630179689694 0.954415337352494 1 FALSE StreptococcusStreptococcus mitis (SP52) -0.014768023803451 0.558511091571272 -0.0264417735409762 0.978904975318933 1 FALSE StreptococcusStreptococcus constellatus (SP53) -0.148549220656318 0.399523781721562 -0.371815715240315 0.710030062161174 1 FALSE PrevotellaPrevotella maculosa (SP55) -0.710041262775025 0.344973492131482 -2.0582487610509 0.0395662600336878 1 FALSE StreptococcusStreptococcus sp._str._C300 (SP56) -0.106972529248501 0.593056470464099 -0.180374946697384 0.85685822137157 1 FALSE StreptococcusStreptococcus oralis (SP58) -0.732484226047889 0.520133796371401 -1.40826116502697 0.15905375056341 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_150 (SP6) 0.0773087159208288 0.352692614179991 0.219195732523549 0.826497579610731 1 FALSE PrevotellaPrevotella denticola (SP60) -0.257939886408422 0.530831221746768 -0.485916946557209 0.627026052633535 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP62) 0.750185117469159 0.493931173485682 1.51880496259243 0.128811596399557 1 FALSE TreponemaTreponema socranskii (SP63) 0.0219649803629826 0.457502465364798 0.0480106273208133 0.961707772998054 1 FALSE StreptococcusStreptococcus gordonii (SP64) 0.380280482955646 0.544500044023956 0.698403034360298 0.484925179273233 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP65) -0.188911341951474 0.316616339554446 -0.596656957809937 0.550736435108284 1 FALSE CampylobacterCampylobacter concisus (SP67) 0.634068995340556 0.386299598067793 1.64139180706391 0.1007161094894 1 FALSE CorynebacteriumCorynebacterium durum (SP68) 0.356947375239384 0.340032140092488 1.0497459891359 0.293834913448276 1 FALSE ActinomycesActinomyces sp._HMT_170 (SP69) 0.436212577624172 0.414807748536313 1.05160180629071 0.292982278720286 1 FALSE TreponemaTreponema sp._HMT_237 (SP70) -0.109409086129578 0.383403001355706 -0.285363144635563 0.775365940451037 1 FALSE ParvimonasParvimonas sp._Oral_Taxon_110 (SP72) -0.26108659552942 0.38483123645604 -0.678444395350542 0.497489968456762 1 FALSE ActinomycesActinomyces sp._HMT_525 (SP73) 0.0987910522648537 0.371937204572963 0.265612181438746 0.790537903073181 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_848 (SP76) 0.2432938977887 0.377396039496156 0.644664681996955 0.519144508468089 1 FALSE PrevotellaPrevotella melaninogenica (SP79) -0.0825299281003648 0.421874070208098 -0.195626927390098 0.844902182480183 1 FALSE SelenomonasSelenomonas noxia (SP8) 0.105215805491839 0.436387227165954 0.241106519489917 0.809472559992945 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP82) 0.344977998120386 0.419483775092193 0.822386987540979 0.410856682845187 1 FALSE FusobacteriumFusobacterium nucleatum_ss_animalis (SP84) 0.226032003938208 0.564941204012934 0.400098279843353 0.689084131138886 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP86) 0.0185841211163832 0.45123723330117 0.0411848130980353 0.967148560792657 1 FALSE VeillonellaVeillonella parvula (SP88) -0.923694410543587 0.352473929949491 -2.62060348881959 0.0087774284844476 1 FALSE PrevotellaPrevotella oulorum (SP9) 0.0516677506979597 0.423337811465984 0.122048513736674 0.902860597021592 1 FALSE MegasphaeraMegasphaera micronuciformis (SP92) 0.270884534285743 0.353773880162882 0.765699644532898 0.443855038627839 1 FALSE StreptococcusStreptococcus intermedius (SP94) 0.32523749546904 0.5504276335185 0.590881481349371 0.554599834863613 1 FALSE ActinomycesActinomyces sp._HMT_897 (SP95) -0.103527985279873 0.389259332703741 -0.265961472421952 0.790268881207454 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP97) 0.506010680514001 0.318179096687366 1.59033288415924 0.111759790004175 1 FALSE CapnocytophagaCapnocytophaga ochracea (SP98) -0.235666670338268 0.363426751639874 -0.648457135515973 0.516689326277926 1 FALSE Peptostreptococcaceae_[XI][G-9]Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP99) 0.228843100232577 0.476410907032271 0.480348155037256 0.630979852840375 1 FALSE ActinomycesActinomyces viscosus_nov_95.849% (SPN129) 0.608104913146652 0.411157807333664 1.47900611954855 0.139138679273509 1 FALSE ActinomycesActinomyces sp._HMT_175_nov_97.633% (SPN13) -0.634694144763385 0.370597094806182 -1.71262579674382 0.0867814042961241 1 FALSE FusobacteriumFusobacterium nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP1) -0.194834217750896 0.437595747460694 -0.445237913945672 0.656147830173426 1 FALSE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP26) 0.00893817029385569 0.458025375762792 0.01951457444682 0.984430610530074 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP3) -0.54805715901327 0.457919801018801 -1.1968409267167 0.231368562807412 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP6) 0.190496773315285 0.456566170436418 0.417238038318071 0.676504304873132 1 FALSE FusobacteriumFusobacterium nucleatum_nucleatum_ss_animalis (SPP60) 1.00594058600886 0.537409961472088 1.87183092634413 0.0612299982082421 1 FALSE