Group24 Weeks.B.Plaque 2...1 Group24 Weeks.B.Plaque 2...2 Group24 Weeks.B.Plaque 2...3 Group24 Weeks.B.Plaque 2...4 Group24 Weeks.B.Plaque 2...5 Group24 Weeks.B.Plaque 2...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance PorphyromonasPorphyromonas catoniae (SP10) -0.03006557976142 0.302215961634783 -0.0994837585638615 0.920754182713288 1 FALSE StreptococcusStreptococcus mutans (SP100) 0.177300960765442 0.594949290464668 0.298010206259707 0.765695373892156 1 FALSE TannerellaTannerella forsythia (SP101) 0.168165408533134 0.438788886375244 0.383249015084037 0.701535138489388 1 FALSE PrevotellaPrevotella oralis (SP104) -0.0722028214501221 0.378396270385527 -0.190812719630029 0.848672322960767 1 FALSE StomatobaculumStomatobaculum longum (SP105) -0.24027866309722 0.390062151919299 -0.616000967832765 0.537893881027594 1 FALSE GranulicatellaGranulicatella adiacens (SP107) -0.210163349276871 0.466867920373077 -0.450155900857202 0.652598031594405 1 FALSE GranulicatellaGranulicatella paradiacens (SP108) -0.442582562084007 0.471892829984689 -0.937887871910169 0.348302036524869 1 FALSE Saccharibacteria_(TM7)_[G-5]Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP110) -0.473325582288654 0.490144619713095 -0.96568556146901 0.334201546533733 1 FALSE PrevotellaPrevotella salivae (SP111) -0.629870868178826 0.367658381293322 -1.71319599994732 0.0866764872925565 1 FALSE VeillonellaVeillonella atypica (SP116) -0.491522374211349 0.315108870076943 -1.55984937552323 0.118795480133195 1 FALSE CatonellaCatonella morbi (SP118) -0.234360690580011 0.411188302491213 -0.569959527447936 0.56870514886212 1 FALSE PrevotellaPrevotella oris (SP12) -1.28949754066032 0.49946008543939 -2.58178296575174 0.0098291376506625 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP120) 0.0217136149196736 0.455713308559224 0.0476475330253642 0.961997149148087 1 FALSE CampylobacterCampylobacter showae (SP122) 0.621034540153834 0.336642412961618 1.84478994993611 0.065068099952224 1 FALSE FretibacteriumFretibacterium fastidiosum (SP124) -0.248138079576742 0.343802020880544 -0.721747007016458 0.470450035689551 1 FALSE PrevotellaPrevotella sp._HMT_300 (SP126) -0.874469043474109 0.417056112594287 -2.09676591966126 0.0360143018606846 1 FALSE StreptococcusStreptococcus sp._str._2136FAA (SP128) 0.385309878714273 0.47646959640188 0.808676737453952 0.41870111224703 1 FALSE PrevotellaPrevotella veroralis (SP129) -0.480482166612103 0.379767981877468 -1.26519925201891 0.205799910538514 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP130) -0.281555522588878 0.449492166766379 -0.626385826953052 0.531061903543397 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP139) -0.0569968580341886 0.379228876540328 -0.15029672464335 0.880530516995148 1 FALSE HaemophilusHaemophilus parainfluenzae (SP140) 1.77015305151187 0.568996576494541 3.11100826373576 0.0018644972148876 0.261029610084264 FALSE OribacteriumOribacterium sp._Oral_Taxon_78 (SP142) 0.230862327089462 0.443807498047138 0.520185729410416 0.602934130727742 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP144) -0.176703822701949 0.41437680603639 -0.426432706000515 0.669792573628817 1 FALSE LeptotrichiaLeptotrichia buccalis (SP146) 0.0464136346505618 0.370689728633903 0.125208850057997 0.900358211051429 1 FALSE ActinomycesActinomyces viscosus (SP147) 0.205621646875994 0.566798866604006 0.362777096058753 0.716771402679389 1 FALSE StreptococcusStreptococcus cristatus (SP15) -0.282384170083938 0.505187526724712 -0.558969006845285 0.57618287236713 1 FALSE PorphyromonasPorphyromonas gingivalis (SP152) -0.69829395973828 0.391652839253343 -1.78294114009112 0.0745958852340535 1 FALSE Peptostreptococcaceae_[XI][G-5]Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP153) -0.41481287377079 0.388087774487124 -1.0688635433543 0.285131161465612 1 FALSE PorphyromonasPorphyromonas endodontalis (SP155) -0.862164287271304 0.483328277152243 -1.78380684107943 0.074455057571681 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP158) 0.128038312808261 0.400792774510316 0.31946262745055 0.749375726760832 1 FALSE ActinomycesActinomyces sp._HMT_169 (SP160) -0.0297930102528921 0.324091969912354 -0.0919276409747185 0.926755530118672 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_155 (SP165) 0.173475504237157 0.301752679319449 0.574893003861313 0.56536366176983 1 FALSE ScardoviaScardovia wiggsiae (SP166) -0.553079715395688 0.478239146365131 -1.15649193421196 0.247479996853105 1 FALSE StreptococcusStreptococcus sanguinis (SP17) 0.592879492032356 0.656126586456796 0.903605347306553 0.366204704843027 1 FALSE ActinomycesActinomyces odontolyticus (SP170) 0.943674836969897 0.428858153171511 2.20043580841635 0.0277759895938178 1 FALSE ActinomycesActinomyces sp._HMT_171 (SP171) 0.151854254952574 0.403703882098537 0.376152575405527 0.706803469990169 1 FALSE ActinomycesActinomyces naeslundii (SP172) 0.502543902289603 0.371844092352234 1.35149088724411 0.176538237078301 1 FALSE StreptococcusStreptococcus anginosus (SP175) -0.837584849681358 0.532403564984474 -1.57321420209833 0.115669227894033 1 FALSE KingellaKingella oralis (SP176) 1.03078428001971 0.479805614085673 2.14833726358953 0.0316869726791282 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP18) -0.0121496369317415 0.440224421861549 -0.0275987344826647 0.977982191018747 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_178 (SP181) 1.05326477942235 0.320845404388364 3.28277969706382 0.00102788960052633 0.145960323274739 FALSE GemellaGemella haemolysans (SP183) -0.258450192045756 0.382875258806903 -0.675024531099569 0.499660179621915 1 FALSE PorphyromonasPorphyromonas pasteri (SP184) -0.615194846211118 0.344608164038166 -1.78520102078308 0.0742287164657297 1 FALSE OlsenellaOlsenella sp._Oral_Taxon_807 (SP189) 0.640609000301898 0.535850383900555 1.1954997505811 0.231891833633127 1 FALSE RothiaRothia dentocariosa (SP193) 1.07065560735138 0.549988012247017 1.94668898868748 0.051572032539856 1 FALSE StreptococcusStreptococcus vestibularis (SP198) 0.342866917037806 0.430685236345949 0.796096285878714 0.425976072782805 1 FALSE EikenellaEikenella corrodens (SP200) 0.587232046722929 0.338642826845337 1.73407496090601 0.0829047835892995 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP201) -0.218678422060434 0.575825800707927 -0.379764890339384 0.704119946671645 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP202) 0.527108074511917 0.453807845745945 1.16152261238561 0.245429432846719 1 FALSE PrevotellaPrevotella multiformis (SP204) 0.0821921852593927 0.359604068106652 0.228563001781771 0.819208583650008 1 FALSE CampylobacterCampylobacter gracilis (SP205) 0.141453468245541 0.426420691847013 0.331722805553466 0.740098578525435 1 FALSE SelenomonasSelenomonas sputigena (SP21) -1.12684672210298 0.4604296033268 -2.4473811283224 0.0143898583693818 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP212) -0.983421972662335 0.510124469627845 -1.92780788065269 0.0538790271357212 1 FALSE LancefieldellaLancefieldella rimae (SP217) -0.201290764077319 0.472817020577122 -0.425726560840856 0.670307105514918 1 FALSE TannerellaTannerella sp._HMT_286 (SP218) 0.00317371235568414 0.378043328272077 0.00839510214395327 0.993301756292582 1 FALSE LeptotrichiaLeptotrichia sp._HMT_417 (SP220) 0.560893054961896 0.362020260510546 1.54934161466788 0.121299620983389 1 FALSE PrevotellaPrevotella pleuritidis (SP233) -0.384987855592775 0.455814835573649 -0.84461457931325 0.398326066282777 1 FALSE FilifactorFilifactor alocis (SP234) -0.463277658525852 0.412713162721198 -1.12251728408966 0.261642562827977 1 FALSE CorynebacteriumCorynebacterium matruchotii (SP24) 1.68813054621133 0.542248829395132 3.11320274880888 0.00185068832256054 0.260947053481036 FALSE CardiobacteriumCardiobacterium hominis (SP242) 0.377356704644669 0.361295524875172 1.0444544110394 0.296275200956579 1 FALSE LautropiaLautropia mirabilis (SP245) 0.82026274711615 0.466815485245388 1.75714553831685 0.0788930054301362 1 FALSE ActinomycesActinomyces oris (SP249) 0.699094595345894 0.492045488402222 1.42079261333338 0.155377058744897 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP259) 0.273111844568598 0.313915405219109 0.870017335969762 0.384290930364454 1 FALSE ArachniaArachnia propionica (SP260) -0.214584123070048 0.362239408015144 -0.592382049887505 0.553594783573598 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_180 (SP262) 1.30129829670524 0.456633119583761 2.84976766006685 0.00437511760370129 0.603766229310778 FALSE CapnocytophagaCapnocytophaga endodontalis (SP268) 0.23756088920346 0.364895194831438 0.651038688830092 0.515021512606832 1 FALSE AlloprevotellaAlloprevotella tannerae (SP27) -1.17788230697012 0.488749608762212 -2.40999130404048 0.0159529007539645 1 FALSE LeptotrichiaLeptotrichia sp._HMT_498 (SP271) 0.341850590226445 0.313182887989214 1.09153661753773 0.275036828491786 1 FALSE ShuttleworthiaShuttleworthia satelles (SP278) -0.175465952336085 0.29592796124484 -0.592934684502188 0.553224864700687 1 FALSE SolobacteriumSolobacterium moorei (SP279) 0.0948663925689793 0.374548442887482 0.253282036998024 0.800050276047373 1 FALSE DialisterDialister invisus (SP28) -0.505987618865428 0.499494583614794 -1.01299921052926 0.311060538020348 1 FALSE ActinomycesActinomyces dentalis (SP286) 0.889983728910984 0.433321151316435 2.05386634418191 0.0399886295440686 1 FALSE AnaeroglobusAnaeroglobus geminatus (SP287) -0.386005791471439 0.421107715233835 -0.916643836024462 0.359329305699966 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP29) -0.923925128521004 0.477646494955428 -1.93432829148515 0.0530727768928797 1 FALSE ActinomycesActinomyces israelii (SP293) 0.580821716462985 0.436419383229492 1.33087974270281 0.183228583721669 1 FALSE FretibacteriumFretibacterium sp._HMT_360 (SP294) 0.227825301100186 0.369150570838585 0.617160906950907 0.537128598268862 1 FALSE PeptostreptococcusPeptostreptococcus stomatis (SP296) -0.272329648159637 0.436779987468134 -0.623493877863406 0.532960024118647 1 FALSE StreptococcusStreptococcus sp._HMT_064 (SP303) 0.233376698326929 0.47844201810951 0.487784704297254 0.625702346717221 1 FALSE ParvimonasParvimonas micra (SP31) -0.488671681428405 0.485612606814605 -1.00629941350548 0.314271562529571 1 FALSE ActinomycesActinomyces massiliensis (SP310) 0.128992921542371 0.366964853961188 0.351513013167232 0.725203511508462 1 FALSE TreponemaTreponema denticola (SP311) -0.816177352038327 0.370237726506764 -2.20446835534308 0.0274914230518704 1 FALSE RothiaRothia mucilaginosa (SP318) 0.621308539540195 0.456010434088321 1.36248755093147 0.173044070304067 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP32) 0.0349265085685545 0.335746897568539 0.104026303210813 0.917148474864984 1 FALSE CapnocytophagaCapnocytophaga granulosa (SP320) 0.375832152005195 0.400361017109778 0.93873313320648 0.347867777516247 1 FALSE MogibacteriumMogibacterium timidum (SP324) -0.789356222426309 0.427891201450979 -1.84475918118812 0.0650725776612955 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP33) 0.283588986903005 0.41357243651533 0.685705723748089 0.492898696658059 1 FALSE GemellaGemella morbillorum (SP332) -0.689523151876684 0.414908810425205 -1.6618667392723 0.0965394969567905 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP34) 0.692583537085385 0.445880639638118 1.55329358468556 0.120353012208453 1 FALSE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP35) 0.973332383412176 0.444286960027346 2.19077414145188 0.0284681407604786 1 FALSE PrevotellaPrevotella loescheii (SP36) -0.147218674204587 0.339674793181609 -0.433410653836407 0.664716462029352 1 FALSE ActinomycesActinomyces sp._HMT_448 (SP361) -0.140944205305941 0.663228232493021 -0.212512372665655 0.831707326228531 1 FALSE NeisseriaNeisseria elongata (SP369) 0.795788778623598 0.344856886474341 2.30759138017912 0.021021874396334 1 FALSE StreptococcusStreptococcus salivarius (SP374) -0.0299017868468863 0.317000672399502 -0.0943272032218355 0.924849241205118 1 FALSE TreponemaTreponema sp._HMT_231 (SP40) 0.0773867636841144 0.313760690460497 0.246642635731506 0.805184805117163 1 FALSE PrevotellaPrevotella intermedia (SP41) -0.5319535856959 0.472991132609017 -1.12465868601309 0.260733694967717 1 FALSE AlloprevotellaAlloprevotella rava (SP42) -0.457624667099323 0.377491190118976 -1.21227906525472 0.225405574734381 1 FALSE PeptidiphagaPeptidiphaga sp._HMT_183 (SP422) 0.179524305189456 0.429270839242624 0.418207548190781 0.675795377484895 1 FALSE NeisseriaNeisseria mucosa (SP44) 0.841697694391292 0.406736204754505 2.06939457208959 0.0385090754532754 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP442) 0.107941641576553 0.430647823301277 0.250649453535118 0.802085143489675 1 FALSE GemellaGemella moribillum (SP45) -0.0521343773218112 0.388454282720182 -0.134209814747661 0.893236665082605 1 FALSE RothiaRothia aeria (SP465) 1.24367115629755 0.404873160952439 3.07175499944697 0.00212804312257005 0.295797994037237 FALSE LeptotrichiaLeptotrichia wadei (SP49) 0.212197062285711 0.543950288362641 0.390103777542708 0.696459809620031 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP5) -0.12298146148521 0.556059248504162 -0.221166111014319 0.824963095368756 1 FALSE FusobacteriumFusobacterium nucleatum (SP51) -0.396355012294588 0.517343226654008 -0.766135501295863 0.443595681121338 1 FALSE StreptococcusStreptococcus mitis (SP52) -0.511068026185152 0.556177712590065 -0.918893394352605 0.358151335371402 1 FALSE StreptococcusStreptococcus constellatus (SP53) -0.0113589170751122 0.413064696137876 -0.0274991234576986 0.978061638963649 1 FALSE PrevotellaPrevotella maculosa (SP55) -0.276568747660743 0.356042582623899 -0.776785590146371 0.437285279757447 1 FALSE StreptococcusStreptococcus sp._str._C300 (SP56) -0.000895043714751617 0.608440794772807 -0.00147104487805724 0.998826276426868 1 FALSE StreptococcusStreptococcus oralis (SP58) -0.211470456031483 0.480205423640829 -0.440374984580875 0.659665539737368 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_150 (SP6) 0.374794187955147 0.356105019516209 1.05248218198196 0.292578381189015 1 FALSE PrevotellaPrevotella denticola (SP60) -1.24093450396141 0.501011820048972 -2.47685674130424 0.0132545091360824 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP62) 0.804459815875573 0.534550897419579 1.50492650888609 0.13234297208931 1 FALSE TreponemaTreponema socranskii (SP63) -0.0594581549656393 0.44174791570209 -0.13459747709537 0.892930136442307 1 FALSE StreptococcusStreptococcus gordonii (SP64) 0.341810121624746 0.573243650606215 0.596273715833181 0.550992387069962 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP65) -0.159388875254268 0.321855946111158 -0.495218053853263 0.620446208012352 1 FALSE CampylobacterCampylobacter concisus (SP67) 0.544455162261862 0.3948167152865 1.37900737527482 0.167892479953539 1 FALSE CorynebacteriumCorynebacterium durum (SP68) 0.812211604341909 0.376674024077363 2.15627187548004 0.0310624420234596 1 FALSE ActinomycesActinomyces sp._HMT_170 (SP69) 1.18591927840642 0.462715635289951 2.56295484301776 0.0103785546110925 1 FALSE TreponemaTreponema sp._HMT_237 (SP70) -0.385791665701482 0.376199429179893 -1.02549774342428 0.305128389622701 1 FALSE ParvimonasParvimonas sp._Oral_Taxon_110 (SP72) -0.468720965640956 0.351055071289846 -1.33517787941015 0.181818134931307 1 FALSE ActinomycesActinomyces sp._HMT_525 (SP73) 0.338603200448539 0.387393787529946 0.874054286227716 0.38208869090876 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_848 (SP76) 0.150651480364642 0.391740598765171 0.384569485112138 0.70055640589528 1 FALSE PrevotellaPrevotella melaninogenica (SP79) 0.0994905595178884 0.449172265023999 0.221497557318177 0.82470503834836 1 FALSE SelenomonasSelenomonas noxia (SP8) -0.250859280234325 0.419043321563512 -0.598647603542116 0.549407904545342 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP82) 0.842756921829646 0.453351134769177 1.85894962468492 0.0630342791223656 1 FALSE FusobacteriumFusobacterium nucleatum_ss_animalis (SP84) 0.861404383622494 0.544699094677304 1.58143164187342 0.113779377382769 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP86) -0.0612608001721868 0.456394582463632 -0.134227711121151 0.89322251388293 1 FALSE VeillonellaVeillonella parvula (SP88) -0.802503279456441 0.283624720492122 -2.82945463309405 0.00466274101617963 0.638795519216609 FALSE PrevotellaPrevotella oulorum (SP9) -0.0316777743515448 0.4232067466066 -0.0748517706902046 0.940332650260391 1 FALSE MegasphaeraMegasphaera micronuciformis (SP92) -0.0375879600781223 0.327540202388338 -0.11475830998467 0.90863669448393 1 FALSE StreptococcusStreptococcus intermedius (SP94) 0.186625951650447 0.558753913489593 0.334003838084836 0.738376662456842 1 FALSE ActinomycesActinomyces sp._HMT_897 (SP95) 0.457275926118607 0.428524745903354 1.06709339539924 0.285929663944981 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP97) 0.537710349672568 0.33157114387222 1.6217042996956 0.104866677738965 1 FALSE CapnocytophagaCapnocytophaga ochracea (SP98) -0.484645995592883 0.340537743706584 -1.42317850091374 0.154684416300619 1 FALSE Peptostreptococcaceae_[XI][G-9]Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP99) -0.483509601282084 0.47142611123897 -1.02563177930759 0.30506518201572 1 FALSE ActinomycesActinomyces viscosus_nov_95.849% (SPN129) 0.343084897279829 0.393281294101323 0.872365155489541 0.383009203178763 1 FALSE ActinomycesActinomyces sp._HMT_175_nov_97.633% (SPN13) -0.422633650986853 0.395953914213135 -1.06738091433377 0.285799863297471 1 FALSE FusobacteriumFusobacterium nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP1) -0.105248021114784 0.433773792615518 -0.242633425316389 0.808289385154859 1 FALSE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP26) 0.0277310626231682 0.452287191429596 0.0613129514800441 0.951109976419324 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP3) -0.118758520536212 0.499299862722952 -0.237850096510255 0.811997362004304 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP6) 0.125927029713909 0.453245856109187 0.277833824659554 0.781139924671528 1 FALSE FusobacteriumFusobacterium nucleatum_nucleatum_ss_animalis (SPP60) 1.02037832638553 0.513725256085149 1.98623352521412 0.0470073999216301 1 FALSE