Group12 Weeks.B.Plaque 2...1 Group12 Weeks.B.Plaque 2...2 Group12 Weeks.B.Plaque 2...3 Group12 Weeks.B.Plaque 2...4 Group12 Weeks.B.Plaque 2...5 Group12 Weeks.B.Plaque 2...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance PorphyromonasPorphyromonas catoniae (SP10) 0.215482424586288 0.347297697352972 0.620454515617721 0.534958590604417 1 FALSE StreptococcusStreptococcus mutans (SP100) -0.565827495856029 0.555222416673472 -1.01910059620088 0.30815521116378 1 FALSE TannerellaTannerella forsythia (SP101) 0.0146335932199755 0.401990809601682 0.0364028054135749 0.970961177267117 1 FALSE PrevotellaPrevotella oralis (SP104) -0.256936760891726 0.281141158078436 -0.913906603529187 0.360765923505032 1 FALSE StomatobaculumStomatobaculum longum (SP105) -0.247705709333894 0.422658195018186 -0.586066264072404 0.557830985912505 1 FALSE GranulicatellaGranulicatella adiacens (SP107) -0.131851216145383 0.441453063954472 -0.298675503493575 0.765187649731107 1 FALSE GranulicatellaGranulicatella paradiacens (SP108) 0.435214584776179 0.422398775547368 1.03034054540571 0.302850172225226 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_171 (SP109) -0.591808180281707 0.430408308924478 -1.3749924618336 0.169133781731284 1 FALSE Saccharibacteria_(TM7)_[G-5]Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP110) 0.418123756522117 0.500506641429696 0.835401015514495 0.403491958241188 1 FALSE PrevotellaPrevotella salivae (SP111) -0.0689810747642919 0.392381020299074 -0.175801252343231 0.860450085734028 1 FALSE CatonellaCatonella morbi (SP118) -0.049049141142178 0.418459601301846 -0.117213563721764 0.906690818716192 1 FALSE PrevotellaPrevotella oris (SP12) 0.0364092705656071 0.52254508682797 0.0696768020279819 0.944450906196748 1 FALSE CapnocytophagaCapnocytophaga gingivalis (SP120) 0.0295623672028122 0.450216545806128 0.0656625516725062 0.947646487476331 1 FALSE BifidobacteriumBifidobacterium dentium (SP121) -0.205792520653122 0.336152157077615 -0.612200505991715 0.540405106855118 1 FALSE CampylobacterCampylobacter showae (SP122) 0.142578139260904 0.405743484885731 0.351399700973776 0.725288506696591 1 FALSE FretibacteriumFretibacterium fastidiosum (SP124) -0.105777929479476 0.403175165406186 -0.262362215125299 0.793042200554679 1 FALSE PrevotellaPrevotella sp._HMT_300 (SP126) -0.0948727616516515 0.427286327583815 -0.222035566146313 0.824286196498876 1 FALSE StreptococcusStreptococcus sp._str._2136FAA (SP128) 0.292643587196526 0.439858031731673 0.665313728714741 0.505849851428376 1 FALSE PrevotellaPrevotella veroralis (SP129) 0.30423768803544 0.40051786201723 0.759610786153532 0.447487269839338 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP130) 0.632085584025301 0.436432889700813 1.44829961018431 0.147533276653223 1 FALSE LachnoanaerobaculumLachnoanaerobaculum orale (SP139) 0.0662206933986485 0.335541879523413 0.197354480736369 0.843550148127327 1 FALSE HaemophilusHaemophilus parainfluenzae (SP140) -0.152063276195898 0.573938688987823 -0.264946899579242 0.791050368276447 1 FALSE OribacteriumOribacterium sp._Oral_Taxon_78 (SP142) -0.791310634516109 0.421250521133521 -1.87847989454544 0.0603155449638794 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_71 (SP144) -0.110777507679161 0.372435346574613 -0.297440908060985 0.766129915957519 1 FALSE ActinomycesActinomyces viscosus (SP147) 0.661210004804525 0.543964773411727 1.21553827954233 0.224160858132792 1 FALSE StreptococcusStreptococcus cristatus (SP15) 0.439960824480211 0.499091398331286 0.881523556509332 0.37803450977821 1 FALSE PorphyromonasPorphyromonas gingivalis (SP152) -0.042645656259867 0.363924858594133 -0.117182586604856 0.906715365717993 1 FALSE Peptostreptococcaceae_[XI][G-5]Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP153) -0.204165904227377 0.324163335765604 -0.629824171031499 0.52880962951038 1 FALSE PorphyromonasPorphyromonas endodontalis (SP155) 0.0183903723266578 0.506721401376097 0.0362928668035636 0.971048837660577 1 FALSE BergeyellaBergeyella sp._HMT_322 (SP158) 0.0899036602727999 0.408259116292679 0.220212254141922 0.825705853442904 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_155 (SP165) -0.290114995211188 0.343725843315587 -0.844030208531115 0.398652525219625 1 FALSE ScardoviaScardovia wiggsiae (SP166) -0.316372498420257 0.530494864250204 -0.596372405729911 0.550926470448746 1 FALSE StreptococcusStreptococcus sanguinis (SP17) -0.141367336008233 0.600111488668371 -0.235568454658188 0.813767554147886 1 FALSE ActinomycesActinomyces odontolyticus (SP170) 0.346270448349447 0.359431137235006 0.963384672271858 0.335354515461425 1 FALSE ActinomycesActinomyces sp._HMT_171 (SP171) -0.546532734579794 0.410427226940133 -1.33161910006403 0.182985385331164 1 FALSE ActinomycesActinomyces naeslundii (SP172) -0.245108613852188 0.410065802560799 -0.597729955342587 0.550020134410805 1 FALSE StreptococcusStreptococcus anginosus (SP175) 0.212529335688357 0.509271805788624 0.417320050457629 0.676444324642025 1 FALSE KingellaKingella oralis (SP176) 0.282135179743832 0.475906684935736 0.592837185680486 0.553290119009136 1 FALSE LeptotrichiaLeptotrichia sp._AF189244.1 (SP18) -0.567616478447738 0.416544464369079 -1.36267920234514 0.172983635202519 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_178 (SP181) -0.256577631914403 0.374480440196342 -0.685156297562237 0.493245297997109 1 FALSE GemellaGemella haemolysans (SP183) -0.160809063659891 0.343476399652815 -0.468180823551301 0.639655284438422 1 FALSE PorphyromonasPorphyromonas pasteri (SP184) -0.361656582689682 0.374257775074229 -0.966330178759684 0.33387898954285 1 FALSE OlsenellaOlsenella sp._Oral_Taxon_807 (SP189) 0.523945911916297 0.525393320643381 0.997245094921816 0.318645557053384 1 FALSE RothiaRothia dentocariosa (SP193) -0.294469725129294 0.593299844583604 -0.496325302994074 0.619664916920607 1 FALSE StreptococcusStreptococcus vestibularis (SP198) 0.259616938442442 0.378597665284282 0.685733067707907 0.492881450338542 1 FALSE EikenellaEikenella corrodens (SP200) -0.252170270614213 0.374913918943597 -0.672608451894125 0.501196423267692 1 FALSE ActinomycesActinomyces sp._str._ChDCB197 (SP201) -0.289869696540904 0.56103079574446 -0.516673413901034 0.605384158035135 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP202) -0.0370590550857287 0.402462610486256 -0.0920807402231822 0.926633890508906 1 FALSE CampylobacterCampylobacter gracilis (SP205) 0.394398324892963 0.471229388736416 0.836956128628835 0.402617228580718 1 FALSE SelenomonasSelenomonas sputigena (SP21) 0.0254395112770621 0.484030729349465 0.0525576368080032 0.958084371219516 1 FALSE StreptococcusStreptococcus oralis_subsp._tigurinus_clade_070 (SP212) 0.896953149991976 0.511349686613761 1.75408956624525 0.0794151612109391 1 FALSE LancefieldellaLancefieldella rimae (SP217) 0.0143364000041096 0.493656226248896 0.0290412624045003 0.976831681820643 1 FALSE TannerellaTannerella sp._HMT_286 (SP218) -0.442810334851475 0.36086409841678 -1.2270833723671 0.21979125672569 1 FALSE PrevotellaPrevotella pleuritidis (SP233) 0.25337784556032 0.472449831356909 0.536306352004828 0.591746841316584 1 FALSE FilifactorFilifactor alocis (SP234) 0.12431312173883 0.400380004530109 0.310487837385199 0.756190007159258 1 FALSE CorynebacteriumCorynebacterium matruchotii (SP24) 0.198661611198185 0.544199556241527 0.365052872461393 0.715071939078611 1 FALSE CardiobacteriumCardiobacterium hominis (SP242) -0.0770007640302782 0.361509482373272 -0.212997909556276 0.83132859320533 1 FALSE LautropiaLautropia mirabilis (SP245) -0.410465561953483 0.505639382869061 -0.811775300461073 0.416920577271928 1 FALSE ActinomycesActinomyces oris (SP249) -0.153975407680418 0.478919139157665 -0.321506064575398 0.747826917156902 1 FALSE LeptotrichiaLeptotrichia sp._HMT_215 (SP259) -0.0495022660852272 0.336411698737412 -0.147147873486607 0.883015303535008 1 FALSE ArachniaArachnia propionica (SP260) -0.113431536877067 0.357731589099133 -0.317085603658092 0.751178648301417 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_180 (SP262) -0.000280192679037922 0.456130380740142 -0.000614281992318218 0.999509873913174 1 FALSE CapnocytophagaCapnocytophaga endodontalis (SP268) 0.139333530537177 0.348338069254255 0.399995127823586 0.689160105337032 1 FALSE AlloprevotellaAlloprevotella tannerae (SP27) 0.558299457812696 0.46102539491202 1.21099502104269 0.225897312921103 1 FALSE ShuttleworthiaShuttleworthia satelles (SP278) -0.0547144719521698 0.332358555961452 -0.164624833544276 0.869239283560969 1 FALSE SolobacteriumSolobacterium moorei (SP279) 0.496475178822951 0.328347547137354 1.51204168616879 0.130523258082399 1 FALSE DialisterDialister invisus (SP28) 0.630930601990402 0.4832779691115 1.30552320262055 0.1917147516438 1 FALSE ActinomycesActinomyces dentalis (SP286) -0.188871215897417 0.491728205899174 -0.384096770597178 0.700906724943871 1 FALSE AnaeroglobusAnaeroglobus geminatus (SP287) -0.344485195392544 0.40797261687226 -0.844383130499185 0.398455345977354 1 FALSE PrevotellaPrevotella sp._HMT_317 (SP29) 0.490518872718758 0.457701518749134 1.07170033881319 0.283854648601885 1 FALSE ActinomycesActinomyces israelii (SP293) -0.675922350524982 0.490074061224005 -1.37922490498029 0.167825421585611 1 FALSE FretibacteriumFretibacterium sp._HMT_360 (SP294) -0.160637846169152 0.340891907397682 -0.471228100999633 0.637477853404837 1 FALSE PeptostreptococcusPeptostreptococcus stomatis (SP296) 0.455554509090015 0.39189062345493 1.16245319950199 0.245051424450306 1 FALSE StreptococcusStreptococcus sp._HMT_064 (SP303) 0.308251475280586 0.375173383269596 0.821624051776294 0.411290896168723 1 FALSE ParvimonasParvimonas micra (SP31) 0.358725039945655 0.486445332606595 0.737441631978344 0.460853825905614 1 FALSE ActinomycesActinomyces massiliensis (SP310) -0.246384810379095 0.346514918763927 -0.711036659714358 0.477061518803805 1 FALSE TreponemaTreponema denticola (SP311) -0.207546995192861 0.396695758953804 -0.52318934727263 0.600842493867664 1 FALSE RothiaRothia mucilaginosa (SP318) 0.623121737979411 0.486659094312961 1.28040705549559 0.200402013875809 1 FALSE AggregatibacterAggregatibacter sp._HMT_458 (SP32) -0.109309969071065 0.31839134104128 -0.343319541020097 0.731358081602569 1 FALSE MogibacteriumMogibacterium timidum (SP324) 0.0490736649597044 0.406813408802527 0.120629418543884 0.903984566360643 1 FALSE CapnocytophagaCapnocytophaga sputigena (SP33) 0.155812527582191 0.42372499432078 0.367720879510435 0.713081370154783 1 FALSE GemellaGemella morbillorum (SP332) -0.00383440717506739 0.383344041107758 -0.0100025219225712 0.992019275268287 1 FALSE CapnocytophagaCapnocytophaga leadbetteri (SP34) 0.202477931345973 0.456786231561555 0.443266275022758 0.657573146386573 1 FALSE Bacteroidales_[G-2]Bacteroidales_[G-2] sp._Oral_Taxon_274 (SP35) -0.24823553871657 0.429087537590185 -0.578519572278177 0.562913387238901 1 FALSE PrevotellaPrevotella loescheii (SP36) -0.0157726278766568 0.411914586559738 -0.0382910156408588 0.969455654014602 1 FALSE ActinomycesActinomyces sp._HMT_448 (SP361) -0.203869726297704 0.617033387672272 -0.330403071164095 0.741095421264439 1 FALSE NeisseriaNeisseria elongata (SP369) -0.412305044816345 0.381010115997319 -1.08213673995797 0.279191772685586 1 FALSE StreptococcusStreptococcus salivarius (SP374) -0.0732689149807609 0.347289117224501 -0.210973829431565 0.832907692815842 1 FALSE TreponemaTreponema sp._HMT_231 (SP40) 0.0927135480631156 0.328560500601813 0.282181053088534 0.777804685681347 1 FALSE PrevotellaPrevotella intermedia (SP41) -0.0497006566632125 0.445536544054689 -0.111552368321804 0.911178340774534 1 FALSE AlloprevotellaAlloprevotella rava (SP42) -0.32355846059162 0.368842872964961 -0.87722573569249 0.380364040164312 1 FALSE NeisseriaNeisseria mucosa (SP44) 0.11417578944449 0.381486134493195 0.29929210820774 0.764717175524779 1 FALSE StreptococcusStreptococcus sp._Oral_Taxon_B66 (SP442) 0.139636887557118 0.411167649715119 0.339610588658585 0.734149803017457 1 FALSE GemellaGemella moribillum (SP45) 0.255075493280165 0.349360563140695 0.730121027362327 0.4653162093113 1 FALSE RothiaRothia aeria (SP465) -0.287575266294499 0.408399922444602 -0.704151128563223 0.481338662289213 1 FALSE LeptotrichiaLeptotrichia wadei (SP49) 1.27645180967442 0.520952198687745 2.45022827984936 0.0142765670663119 1 FALSE StreptococcusStreptococcus parasanguinis_II (SP5) 0.319568128957625 0.572587657587771 0.558112150555112 0.576767804046145 1 FALSE FusobacteriumFusobacterium nucleatum (SP51) 0.133461030998587 0.522621557009769 0.255368400343449 0.798438574724162 1 FALSE StreptococcusStreptococcus mitis (SP52) 0.624062899101056 0.586088364510833 1.06479318971281 0.286969527672914 1 FALSE StreptococcusStreptococcus constellatus (SP53) -0.0142099437059378 0.383748755956563 -0.0370292893080967 0.970461652258621 1 FALSE PrevotellaPrevotella maculosa (SP55) -0.129431173335437 0.341079012051143 -0.379475631048296 0.704334697058025 1 FALSE StreptococcusStreptococcus sp._str._C300 (SP56) 0.578358920144314 0.594831229436183 0.972307591671872 0.330897548193808 1 FALSE StreptococcusStreptococcus oralis (SP58) 0.464445736681117 0.543132322852264 0.855124464406898 0.392482247298112 1 FALSE Veillonellaceae_[G-1]Veillonellaceae_[G-1] bacterium_HMT_150 (SP6) 0.250976190041199 0.328561107472357 0.763864572931276 0.444947951239098 1 FALSE PrevotellaPrevotella denticola (SP60) -0.326058377588399 0.545894221176514 -0.597292231607941 0.550312290104387 1 FALSE ActinomycesActinomyces sp._HMT_175 (SP62) 0.282865619066068 0.516837452915484 0.547300930825389 0.584172004467528 1 FALSE TreponemaTreponema socranskii (SP63) 0.0806786742972349 0.465936122862256 0.173153937500325 0.862530429200383 1 FALSE StreptococcusStreptococcus gordonii (SP64) 0.804636050581928 0.52212724499861 1.5410727141505 0.123299089817063 1 FALSE PrevotellaPrevotella sp._HMT_314 (SP65) -0.0837917472261278 0.305959090826654 -0.273865852456731 0.784187714430062 1 FALSE CampylobacterCampylobacter concisus (SP67) 0.460285167779869 0.401165213297493 1.14737059077586 0.251228490495096 1 FALSE CorynebacteriumCorynebacterium durum (SP68) -0.142675847466485 0.375008262788207 -0.380460543470915 0.703603580084627 1 FALSE ActinomycesActinomyces sp._HMT_170 (SP69) 0.204037364034192 0.428517095892547 0.47614754694724 0.633969265325894 1 FALSE TreponemaTreponema sp._HMT_237 (SP70) -0.147241914491797 0.379251597926264 -0.388243359545251 0.697835948526726 1 FALSE ParvimonasParvimonas sp._Oral_Taxon_110 (SP72) -0.465070584756464 0.385290361238267 -1.20706519431681 0.227407037715194 1 FALSE ActinomycesActinomyces sp._HMT_525 (SP73) -0.504630786820439 0.411008216835234 -1.22778758708548 0.219526716575394 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_848 (SP76) -0.120077388173763 0.396612445699521 -0.302757489019231 0.762074682612525 1 FALSE PrevotellaPrevotella melaninogenica (SP79) 0.100694857883387 0.417417313137941 0.241233065122317 0.809374485219123 1 FALSE SelenomonasSelenomonas noxia (SP8) 0.440360149331641 0.42001460095884 1.04844009785935 0.294435887407623 1 FALSE FusobacteriumFusobacterium nucleatum_ss_polymorphum (SP82) -0.594344777412035 0.474215398385577 -1.25332239196666 0.210088402533003 1 FALSE FusobacteriumFusobacterium nucleatum_ss_animalis (SP84) -0.00982652701456238 0.570442359090352 -0.0172261524025532 0.986256198682676 1 FALSE Saccharibacteria_(TM7)_[G-1]Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP86) 0.282308871043352 0.444818413140443 0.634660937370455 0.525649575484595 1 FALSE VeillonellaVeillonella parvula (SP88) 0.523941210399148 0.489862945517467 1.06956693743325 0.284814283942304 1 FALSE PrevotellaPrevotella oulorum (SP9) 0.056323714624258 0.43066164139314 0.130784145163376 0.895946065585543 1 FALSE MegasphaeraMegasphaera micronuciformis (SP92) -0.166536823512327 0.377860975380795 -0.440735705359616 0.659404344456543 1 FALSE StreptococcusStreptococcus intermedius (SP94) -0.0760384015364822 0.562964616639714 -0.135067816500349 0.892558255673356 1 FALSE ActinomycesActinomyces sp._HMT_897 (SP95) -0.360343177292313 0.392009002972765 -0.919221687664524 0.357979629542199 1 FALSE Lachnospiraceae_[G-3]Lachnospiraceae_[G-3] bacterium_HMT_100 (SP97) -0.147744364615695 0.369803689328874 -0.399521067201421 0.689509303854904 1 FALSE CapnocytophagaCapnocytophaga ochracea (SP98) 0.192387155079546 0.335243092979392 0.573873583404065 0.56605335030679 1 FALSE Peptostreptococcaceae_[XI][G-9]Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP99) 0.613247385340739 0.481549845389983 1.2734868284385 0.202845343575699 1 FALSE ActinomycesActinomyces sp._Oral_Taxon_171_nov_97.974% (SPN109) -0.219641626038875 0.424725608483541 -0.517137704088748 0.605060035148503 1 FALSE ActinomycesActinomyces viscosus_nov_95.849% (SPN129) -0.111909835310509 0.446793708647953 -0.250473167245708 0.802221452913805 1 FALSE ActinomycesActinomyces sp._HMT_175_nov_97.633% (SPN13) -0.492140524030056 0.34448604966159 -1.42862250739476 0.153112761504374 1 FALSE FusobacteriumFusobacterium nucleatum_ss_vincentii_nucleatum_subsp._vincentii (SPP1) -0.0792990924734291 0.450827584295123 -0.175896718026725 0.86037508378787 1 FALSE Atopobium_LancefieldellaAtopobium_Lancefieldella parvula_parvulum (SPP26) 0.120709477563486 0.468702533350837 0.257539631161182 0.796762225519067 1 FALSE GranulicatellaGranulicatella adiacens_paradiacens (SPP3) 0.0260874814240963 0.41397709933688 0.0630167259635471 0.949753185399254 1 FALSE Eubacterium_[XIVa][G-1]_LachnoanaerobaculumEubacterium_[XIVa][G-1]_Lachnoanaerobaculum saburreum (SPP6) 0.269335520993172 0.434084638135497 0.620467755205612 0.534949876577113 1 FALSE FusobacteriumFusobacterium nucleatum_nucleatum_ss_animalis (SPP60) 0.132062449039234 0.560597068951498 0.235574633463987 0.813762759085651 1 FALSE