CompareDUS+OSS 12 Weeks P1...1 CompareDUS+OSS 12 Weeks P1...2 CompareDUS+OSS 12 Weeks P1...3 CompareDUS+OSS 12 Weeks P1...4 CompareDUS+OSS 12 Weeks P1...5 CompareDUS+OSS 12 Weeks P1...6 1 Coefficients Standard Errors Test Statistics W p Values Adjusted p Values Differential Abundance Actinomyces sp._HMT_897 (SP1) -0.112179762122907 0.38858176474244 -0.288690237940686 0.772818433779848 1 FALSE Leptotrichia buccalis (SP10) -0.0234524763242326 0.275021736167352 -0.0852749919008644 0.932042772671627 1 FALSE Capnocytophaga endodontalis (SP101) 0.292413280235312 0.319419266522192 0.915452857365435 0.359953940401782 1 FALSE Prevotella veroralis (SP102) 0.665347794955699 0.31710351706714 2.09820376989015 0.0358871487465169 1 FALSE Filifactor alocis (SP107) -0.140577321025021 0.270578028566996 -0.519544479533429 0.603381103632079 1 FALSE Actinomyces israelii (SP109) -0.213734056713438 0.33826532601127 -0.631853282846725 0.527482752641132 1 FALSE Prevotella pleuritidis (SP11) -0.271155219575471 0.342439606283638 -0.791833697387435 0.42845765107617 1 FALSE Prevotella oulorum (SP111) 0.420409998438059 0.394322849878622 1.0661568269946 0.286352754676157 1 FALSE Parvimonas sp._HMT_110 (SP112) -0.145582232551269 0.310701990651322 -0.468559059586604 0.63938484670682 1 FALSE Treponema sp._HMT_231 (SP114) 0.157102874605957 0.325282819229775 0.482973170787056 0.629114786123269 1 FALSE Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP116) 0.230712882312091 0.287261906543744 0.803144715872582 0.421891094858132 1 FALSE Streptococcus oralis_subsp._tigurinus_clade_070 (SP117) -0.0251019864906947 0.454312461576881 -0.0552526919547128 0.955937150904374 1 FALSE Prevotella sp._HMT_317 (SP118) -0.246640160917014 0.402101462442688 -0.613377925607938 0.539626478496674 1 FALSE Prevotella loescheii (SP119) 0.16441711612392 0.313063254300826 0.525188165219574 0.599452391236416 1 FALSE Streptococcus oralis (SP12) -0.409920233708472 0.50718260053325 -0.808230079812445 0.418958144759871 1 FALSE Schaalia sp._HMT_180 (SP121) -0.491782176789371 0.419813085695437 -1.17143127154961 0.241425468597688 1 FALSE Schaalia sp._HMT_178 (SP122) 0.412547808482775 0.323532840401328 1.27513425830598 0.202261725532143 1 FALSE Streptococcus cristatus (SP123) 0.651507260862556 0.46419386041682 1.4035240799556 0.160460616527697 1 FALSE Prevotella salivae (SP124) 0.00657315076202801 0.286531261760884 0.0229404314266882 0.981697789257824 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_349 (SP125) 0.00247110549009137 0.35450247461436 0.00697062973334538 0.994438287197033 1 FALSE Selenomonas sp._HMT_134 (SP127) -0.168903000753101 0.24718212653035 -0.683313972267985 0.494408467062288 1 FALSE Prevotella maculosa (SP129) 0.0529356363798869 0.319229185952758 0.165823297835057 0.868296010929431 1 FALSE Selenomonas sputigena (SP13) -0.416080746689756 0.423568769948204 -0.98232158792216 0.325941442471783 1 FALSE Lautropia mirabilis (SP131) 0.459594164782391 0.40836317575349 1.12545447795182 0.260396496977396 1 FALSE Porphyromonas endodontalis (SP132) -0.481170630389142 0.354407993956769 -1.35767431489662 0.174567050432033 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_346 (SP135) -0.188706496030148 0.402398014515333 -0.46895483879918 0.639101916961994 1 FALSE Olsenella sp._HMT_807 (SP136) -1.61182766683316 0.434002400143357 -3.71386809450996 0.000204115213255445 0.031637858054594 TRUE Actinomyces sp._HMT_525 (SP137) -0.576113337137683 0.425010404067336 -1.35552760973448 0.175249518122651 1 FALSE Bacteroidales_[G-2] bacterium_HMT_274 (SP14) -0.386318094984873 0.344723498570246 -1.12066075155057 0.262432294729367 1 FALSE Capnocytophaga sp._HMT_864 (SP140) 0.46776091222091 0.332464163075158 1.4069513775389 0.159441807157566 1 FALSE Schaalia odontolytica (SP141) 0.0894709072137667 0.378983316908771 0.236081387285194 0.813369516558905 1 FALSE Streptococcus intermedius (SP147) 0.105827813213138 0.464877831072612 0.227646504392266 0.819921063722937 1 FALSE Campylobacter gracilis (SP151) -0.535672371253781 0.42421456306537 -1.2627392312584 0.206682910135568 1 FALSE Actinomyces sp._HMT_448 (SP153) -0.937666367050778 0.619275431530889 -1.51413461492055 0.129991700948438 1 FALSE Streptococcus gordonii (SP155) -0.291465791750982 0.552620440995796 -0.52742491976188 0.597898542112294 1 FALSE Selenomonas noxia (SP161) 0.252176935548445 0.397020204984009 0.635174060117676 0.525314899244985 1 FALSE Selenomonas infelix (SP164) -0.0395167501845755 0.259265312146973 -0.152418192226865 0.87885710939004 1 FALSE Mogibacterium timidum (SP165) 0.0454864514919866 0.303523376749082 0.149861443883413 0.880873931443472 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_957 (SP166) 0.239727932381908 0.247768322714403 0.967548755852201 0.333269780285964 1 FALSE Leptotrichia hongkongensis (SP167) -0.614865938497362 0.409862082018676 -1.50017765846743 0.133568388874166 1 FALSE Prevotella sp._HMT_314 (SP17) 0.0868861405980006 0.316617720625548 0.274419702176927 0.783762103809892 1 FALSE Capnocytophaga ochracea (SP172) 0.481604929140945 0.34416253084783 1.39935317175444 0.161707102089913 1 FALSE Actinomyces oris (SP173) 0.374909658822931 0.489204703224884 0.766365605954913 0.44345879177127 1 FALSE Mogibacterium vescum (SP174) -0.174461104782974 0.226811875016571 -0.769188583138464 0.441781366997706 1 FALSE Actinomyces naeslundii (SP179) -0.208859479046003 0.393380787345649 -0.53093462051182 0.595464085825672 1 FALSE Treponema sp._HMT_237 (SP18) -0.318285238707952 0.333879366019025 -0.953294126866814 0.340441066400486 1 FALSE Streptococcus anginosus (SP180) -0.112881199436604 0.462710508575945 -0.243956420579276 0.807264571625444 1 FALSE Saccharibacteria_(TM7)_[G-1] bacterium_HMT_347 (SP183) 0.0106029337001037 0.400743449298271 0.0264581585018298 0.978891906583886 1 FALSE Oribacterium sp._HMT_078 (SP186) -0.150675983822041 0.397576841335105 -0.378985816467717 0.704698396413691 1 FALSE Selenomonas flueggei (SP188) 0.273319588259903 0.246669266367094 1.10804070683515 0.267844236106668 1 FALSE Actinomyces sp._HMT_171 (SP189) -0.0437080126350152 0.446419023998424 -0.0979080421876678 0.922005313929985 1 FALSE Catonella morbi (SP19) -0.13700335873884 0.327802945186547 -0.41794425813006 0.675987872687422 1 FALSE Actinomyces sp._HMT_175 (SP190) 0.299761319574251 0.429292604650351 0.698268072468658 0.485009562177822 1 FALSE Tannerella forsythia (SP193) -0.154617543307504 0.266336533414591 -0.580534488923529 0.561554235786613 1 FALSE Slackia exigua (SP195) -0.187883967047537 0.246028463086811 -0.763667604513069 0.445065350748644 1 FALSE Bergeyella sp._HMT_900 (SP196) 0.00481250598028897 0.208896999875428 0.0230376979236601 0.98162020232658 1 FALSE Alloprevotella rava (SP199) -0.233715525985215 0.31391063929474 -0.744528845885252 0.456556596701732 1 FALSE Granulicatella adiacens (SP2) 0.0202982441664369 0.482238325541704 0.0420917274537141 0.966425574863595 1 FALSE Treponema maltophilum (SP203) 0.315213769056904 0.263366358874714 1.19686421000662 0.231359486054277 1 FALSE Neisseria mucosa (SP205) -0.0177433168135375 0.321826118311503 -0.055133240604056 0.956032314236038 1 FALSE Actinomyces sp._HMT_414 (SP206) -0.0411336348329682 0.325615655882888 -0.126325728170032 0.899474091261008 1 FALSE Peptostreptococcus stomatis (SP208) 0.364802142036523 0.315969837871431 1.15454735962792 0.248275833846125 1 FALSE Tannerella sp._HMT_286 (SP212) -0.272837036674979 0.241036140486981 -1.13193414117795 0.257662123750476 1 FALSE Capnocytophaga sputigena (SP216) 0.407641822403886 0.285355800952207 1.42853876123639 0.153136846224811 1 FALSE Actinomyces sp._HMT_169 (SP22) 0.548552431474193 0.582120272999954 0.942335213043228 0.346021045257512 1 FALSE Streptococcus constellatus (SP222) 0.0739216736093099 0.291091737513713 0.253946313422337 0.799537034329189 1 FALSE Prevotella melaninogenica (SP223) -0.178078331235338 0.328243207771473 -0.542519470377947 0.587460698209508 1 FALSE Lachnoanaerobaculum orale (SP224) 0.148463607572009 0.308780273999197 0.480806644962025 0.630653927075917 1 FALSE Capnocytophaga sp._HMT_336 (SP225) -0.260228860095951 0.2501733492498 -1.04019417286576 0.298249698220332 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_155 (SP229) -0.346978937888203 0.267579084208788 -1.29673415586347 0.194722672868659 1 FALSE Kingella oralis (SP232) 0.956723926170061 0.413535148151499 2.31352505451257 0.0206937888808688 1 FALSE Arachnia propionica (SP235) 0.222179728166579 0.379380630651651 0.585638037938173 0.558118780986425 1 FALSE Scardovia wiggsiae (SP236) -0.113701327762922 0.431712960669669 -0.263372513965181 0.792263473637162 1 FALSE Alloprevotella sp._HMT_473 (SP238) -0.242350930618981 0.240865844787316 -1.00616561402874 0.314335910085242 1 FALSE Porphyromonas catoniae (SP24) 0.179491911058338 0.280706888624453 0.639428237539525 0.52254438418439 1 FALSE Dialister invisus (SP25) 0.00127085057942479 0.437511133673473 0.0029047274037448 0.997682366110361 1 FALSE Peptidiphaga sp._HMT_183 (SP251) -0.887432490294701 0.437578407270464 -2.02805365975517 0.042554771727376 1 FALSE Leptotrichia sp._HMT_221 (SP254) -0.148949320577411 0.248383268413002 -0.599675338556798 0.548722626932818 1 FALSE Selenomonas dianae (SP255) -0.207597278240345 0.218895794061643 -0.948384043331066 0.342933979692087 1 FALSE Cardiobacterium hominis (SP257) 0.319474460070455 0.317645455758084 1.0057580055978 0.314531992695534 1 FALSE Saccharibacteria_(TM7)_[G-5] bacterium_HMT_356 (SP26) -0.361119377088449 0.463334454383903 -0.779392453273588 0.435748568010494 1 FALSE Fretibacterium sp._HMT_360 (SP260) -0.371387462193461 0.29543090922946 -1.25710428594662 0.208715875398608 1 FALSE Prevotella saccharolytica (SP268) -0.17343676605864 0.222724145756461 -0.778706616965925 0.436152557366562 1 FALSE Ruminococcaceae_[G-2] bacterium_HMT_085 (SP275) 0.110081776381709 0.235522494454142 0.467393896437957 0.640218088617631 1 FALSE Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP292) -0.739391721748955 0.421606591139832 -1.75374801363986 0.0794736944513992 1 FALSE Mogibacterium neglectum (SP298) 0.389458114731407 0.298650370920646 1.30406037511632 0.192212997873706 1 FALSE Stomatobaculum longum (SP3) 0.350131683757905 0.39673802772947 0.882526148959572 0.37749234547809 1 FALSE Tannerella sp._HMT_808 (SP30) -0.293868883206117 0.271086680949861 -1.08404028621557 0.278346936971912 1 FALSE Porphyromonas pasteri (SP31) 0.159628267767075 0.325482166849293 0.490436294290088 0.623825199209281 1 FALSE Neisseria sicca (SP318) 0.42666854034769 0.347530981063182 1.22771368193537 0.219554468504443 1 FALSE Prevotella oris (SP32) 0.0186543677462837 0.455193050091794 0.0409812226757897 0.967310865419164 1 FALSE Megasphaera micronuciformis (SP320) 0.0879402716958423 0.257187513345567 0.341930564792555 0.732403147101433 1 FALSE Shuttleworthia satelles (SP326) 0.0313634467677478 0.271524001022334 0.115508929780274 0.908041742913278 1 FALSE Actinomyces dentalis (SP346) -0.260716932933801 0.476358524228223 -0.547312412129507 0.584164117936789 1 FALSE Veillonellaceae_[G-1] bacterium_HMT_132 (SP352) 0.228644021093042 0.271467533793837 0.842251807785913 0.399647020160439 1 FALSE Gemella haemolysans (SP354) 0.716070277010412 0.378790650654985 1.89041169778668 0.0587029201386648 1 FALSE Alloprevotella tannerae (SP36) 0.35719193239898 0.425845993183213 0.838781949617415 0.401591681625371 1 FALSE Streptococcus parasanguinis_clade_411 (SP37) 0.540645972874647 0.595338023777231 0.908132777148048 0.363808074972834 1 FALSE Solobacterium moorei (SP371) -0.405146550924504 0.314094140949764 -1.28988891578625 0.197089229801216 1 FALSE Streptococcus mutans (SP4) 0.773899631487323 0.575777624394174 1.3440946620696 0.178917778014977 1 FALSE Prevotella oralis (SP405) 0.522747132757942 0.308824786796144 1.69269810943967 0.0905129453226335 1 FALSE Rothia mucilaginosa (SP41) 0.449505710072184 0.43821208887772 1.02577204390547 0.30499904642329 1 FALSE Lancefieldella rimae (SP42) -0.00849407787012149 0.426216204328966 -0.0199290355079168 0.984099982755758 1 FALSE Fusobacterium nucleatum (SP43) -1.02643819677339 0.435525025838995 -2.35678350468164 0.018433990437496 1 FALSE Campylobacter concisus (SP44) 0.216013446626497 0.34726853088732 0.622035766023924 0.53391835029702 1 FALSE Campylobacter showae (SP46) 0.0379156429871395 0.290523424859706 0.130508040807549 0.89616449290792 1 FALSE Peptococcus sp._HMT_167 (SP47) 0.0903370620213166 0.283851484192578 0.318254675603626 0.750291761866399 1 FALSE Eikenella corrodens (SP48) 0.0614288255954943 0.263358965183484 0.233251317465864 0.815566259025476 1 FALSE Actinomyces sp._HMT_170 (SP49) 0.128768832304058 0.355879616015083 0.361832559408518 0.717477159485581 1 FALSE Schaalia meyeri (SP51) -0.215865500906831 0.318517587088043 -0.677719252115153 0.497949717304442 1 FALSE Veillonella parvula (SP52) 0.665033476726519 0.489834596597562 1.3576694691349 0.174568588730042 1 FALSE Abiotrophia defectiva (SP56) -0.130065481198411 0.290308635716491 -0.448024843895549 0.654135266824472 1 FALSE Streptococcus mitis (SP57) 0.563373488299813 0.496529676677695 1.1346219868858 0.256533736762829 1 FALSE Fusobacterium nucleatum_subsp._vincentii (SP58) -0.362013574164182 0.349468253012049 -1.03589831420739 0.300249584184525 1 FALSE Prevotella denticola (SP59) -0.321326589455142 0.45613005543557 -0.704462654074176 0.481144699607407 1 FALSE Corynebacterium matruchotii (SP6) 0.203356899661062 0.499503834687705 0.407117794777699 0.683921474379598 1 FALSE Lachnospiraceae_[G-3] bacterium_HMT_100 (SP60) -0.0832243814338258 0.274007071816547 -0.303730779217063 0.761333006681301 1 FALSE Rothia aeria (SP61) 0.720012297304506 0.347815894736259 2.07009601401475 0.0384433540901024 1 FALSE Leptotrichia sp._HMT_215 (SP62) -0.230370924877496 0.276943713598882 -0.831833017199873 0.405503204507467 1 FALSE Haemophilus parainfluenzae (SP63) 0.745551253287686 0.528236210380935 1.41139747453139 0.158127447218506 1 FALSE Fretibacterium fastidiosum (SP65) -0.055848519799102 0.323779795405722 -0.172489205909588 0.863052946617719 1 FALSE Rothia dentocariosa (SP66) 0.20641342228568 0.565605776360871 0.364942210480508 0.71515454467096 1 FALSE Lachnoanaerobaculum saburreum (SP67) -0.0320141568285231 0.385933555555956 -0.0829525092276705 0.933889301548596 1 FALSE Aggregatibacter sp._HMT_458 (SP68) 0.103133346848057 0.279245716751502 0.369328303573708 0.711883031307282 1 FALSE Prevotella sp._HMT_300 (SP69) -0.426789550472479 0.34277881531862 -1.24508730236368 0.213099661041202 1 FALSE Streptococcus sanguinis (SP7) 0.61638852619922 0.528944502762345 1.1653179548709 0.243890313908598 1 FALSE Bergeyella sp._HMT_322 (SP70) -0.207826382584306 0.346275043423455 -0.600177190159668 0.548388153536581 1 FALSE Treponema socranskii (SP72) -0.13936181250354 0.390926613189905 -0.356490982709946 0.721472903883529 1 FALSE Prevotella intermedia (SP73) -0.292985474937965 0.286102136398386 -1.02405902530555 0.305807396383117 1 FALSE Gemella morbillorum (SP77) -0.29173904408283 0.379294600935321 -0.769162132451707 0.441797067228369 1 FALSE Anaeroglobus geminatus (SP79) -0.229176693614479 0.297236788476858 -0.771023986596203 0.440692714086607 1 FALSE Capnocytophaga granulosa (SP8) -0.156097195617423 0.246643715943948 -0.632885354569086 0.526808512334675 1 FALSE Veillonella atypica (SP80) -0.0460240541220562 0.318731353095315 -0.144397636677723 0.885186482910934 1 FALSE Bacteroidetes_[G-5] bacterium_HMT_511 (SP81) 0.405139812840571 0.291132589041676 1.39159897617156 0.164043869081869 1 FALSE Capnocytophaga gingivalis (SP82) -0.0809804873889733 0.373698595145351 -0.216700004872846 0.828442144206265 1 FALSE Saccharibacteria_(TM7)_[G-3] bacterium_HMT_351 (SP83) -0.201345810255315 0.238504219704494 -0.844202297572688 0.398556370885368 1 FALSE Treponema denticola (SP84) 0.2994921740502 0.2839539711068 1.05472085099861 0.291553012655522 1 FALSE Leptotrichia wadei (SP85) -0.112745936849701 0.453878808614002 -0.248405377624899 0.803820773212527 1 FALSE Streptococcus salivarius (SP87) 0.820320972390311 0.537546333287383 1.5260470057969 0.126998158445915 1 FALSE Streptococcus sp._HMT_064 (SP9) -0.290571226894355 0.413993754797586 -0.701873454676687 0.482758084782358 1 FALSE Capnocytophaga leadbetteri (SP92) -0.0469511067455263 0.347768255012068 -0.135006879060589 0.892606435426076 1 FALSE Parvimonas micra (SP93) -0.221637030285781 0.459454693027928 -0.482391482009106 0.629527870998692 1 FALSE Colibacter massiliensis (SP94) 0.174318678349354 0.292838241711805 0.595272930647183 0.551661047164419 1 FALSE Bifidobacterium dentium (SP95) 0.0754518590999352 0.36779475991426 0.205146639711573 0.837457558031386 1 FALSE Corynebacterium durum (SP96) -0.0150216429052043 0.370790252406743 -0.0405125075637805 0.967684535634599 1 FALSE Lancefieldella parvula (SP97) 0.378618992621571 0.462972767409252 0.817799705024303 0.413471566529626 1 FALSE Actinomyces naeslundii_nov_97.422% (SPN109) -0.126556544799629 0.378754729389363 -0.334138520207171 0.73827503393497 1 FALSE Actinomyces sp._HMT_175_nov_97.633% (SPN133) 0.471210372660604 0.431644775237918 1.09166240318993 0.274981516309029 1 FALSE Streptococcus sanguinis_nov_97.727% (SPN14) 0.719915252873106 0.396365235647603 1.81629262136693 0.0693254965199655 1 FALSE Actinomyces viscosus_nov_95.849% (SPN249) -0.559871854022821 0.277486063261395 -2.01765756248239 0.0436269374394986 1 FALSE Actinomyces viscosus_nov_95.841% (SPN468) 0.0428338724057093 0.289507162183595 0.147954448113258 0.882378717630294 1 FALSE Actinomyces israelii_nov_97.037% (SPN575) -0.280907584484791 0.322983724980555 -0.869726747072793 0.384449751638174 1 FALSE Prevotella veroralis_nov_96.402% (SPN608) 0.166562773326377 0.25218332614334 0.660482895017824 0.508943991667149 1 FALSE Veillonella dispar_parvula (SPP13) 0.132537427825297 0.46326580130486 0.28609370139558 0.774806355589869 1 FALSE Streptococcus infantis_infantis_clade_638 (SPP16) 0.205172123509209 0.299417412579652 0.685237781402004 0.493193886292058 1 FALSE